Sed0013533 (gene) Chayote v1

Overview


Name	Sed0013533
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ethylene-responsive transcription factor
Location	LG14: 409978 .. 410769 (-)
RNA-Seq Expression	Sed0013533
Synteny	Sed0013533

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGCGAAGCCCTATCCCATCCATACTCTCGTCCTTTTTTGGAAAAGCTTGAAAAAGTGATGGATCCAAAGCATGGGAAGAGGCCCTTTTGTTCCGATGAATCGGATGAAGATAACTCGTTCCCGATCTACTCGGCTAGATCTCAACACGACACGTCGGCCATGGTTTGCGCCCTGTCTCAAGTCATCAATACGAGTAGTGGCAGTAGTAGCAGAAACCCAGTACTAGTAGAAGAACACACAAGAACAACATGGCCGCAATCGCAACCAGCTGCAGTAGATACGGATGCAGAGCTAGGAAGCGGGACGATGATGAAAAGACATTATCGAGGAGTAAGGCAGAGACCTTGGGGAAAGTGGGCTGCTGAGATTCGTGACCCGAAAAAGGCAGCACGAGTGTGGCTAGGCACCTTCGACACTGCCGAGGCTGCCGCACTTGCTTACGATGATGCTGCTCTCAGATTCAAAGGAAACAAAGCCAAGCTCAACTTCCCTGAGAGGCTAGTCCAACAACACTTCCCCATTTCCCATCCTCCACCTCAAAACTACTATGTTCCACCCCCTCCTCCTTATCAAGGGGATTATCATAACCACGACGTTTAGCATCCGGTACTATGAAATATCGTAAAACGAGAATAAAAGAACGTGACACAAAGAATACAATATATAATGTATACATGATTTACAAACGTGTCCATGAATAAAGGAGAGAAACTATTTTATTTAAGAGATTGTGAAAAGAATACAAAACATAAATAAGACGTGGGTTTTAAGAGAATTTATATAGTGCAC

mRNA sequence

TAAAGCGAAGCCCTATCCCATCCATACTCTCGTCCTTTTTTGGAAAAGCTTGAAAAAGTGATGGATCCAAAGCATGGGAAGAGGCCCTTTTGTTCCGATGAATCGGATGAAGATAACTCGTTCCCGATCTACTCGGCTAGATCTCAACACGACACGTCGGCCATGGTTTGCGCCCTGTCTCAAGTCATCAATACGAGTAGTGGCAGTAGTAGCAGAAACCCAGTACTAGTAGAAGAACACACAAGAACAACATGGCCGCAATCGCAACCAGCTGCAGTAGATACGGATGCAGAGCTAGGAAGCGGGACGATGATGAAAAGACATTATCGAGGAGTAAGGCAGAGACCTTGGGGAAAGTGGGCTGCTGAGATTCGTGACCCGAAAAAGGCAGCACGAGTGTGGCTAGGCACCTTCGACACTGCCGAGGCTGCCGCACTTGCTTACGATGATGCTGCTCTCAGATTCAAAGGAAACAAAGCCAAGCTCAACTTCCCTGAGAGGCTAGTCCAACAACACTTCCCCATTTCCCATCCTCCACCTCAAAACTACTATGTTCCACCCCCTCCTCCTTATCAAGGGGATTATCATAACCACGACGTTTAGCATCCGGTACTATGAAATATCGTAAAACGAGAATAAAAGAACGTGACACAAAGAATACAATATATAATGTATACATGATTTACAAACGTGTCCATGAATAAAGGAGAGAAACTATTTTATTTAAGAGATTGTGAAAAGAATACAAAACATAAATAAGACGTGGGTTTTAAGAGAATTTATATAGTGCAC

Coding sequence (CDS)

ATGGATCCAAAGCATGGGAAGAGGCCCTTTTGTTCCGATGAATCGGATGAAGATAACTCGTTCCCGATCTACTCGGCTAGATCTCAACACGACACGTCGGCCATGGTTTGCGCCCTGTCTCAAGTCATCAATACGAGTAGTGGCAGTAGTAGCAGAAACCCAGTACTAGTAGAAGAACACACAAGAACAACATGGCCGCAATCGCAACCAGCTGCAGTAGATACGGATGCAGAGCTAGGAAGCGGGACGATGATGAAAAGACATTATCGAGGAGTAAGGCAGAGACCTTGGGGAAAGTGGGCTGCTGAGATTCGTGACCCGAAAAAGGCAGCACGAGTGTGGCTAGGCACCTTCGACACTGCCGAGGCTGCCGCACTTGCTTACGATGATGCTGCTCTCAGATTCAAAGGAAACAAAGCCAAGCTCAACTTCCCTGAGAGGCTAGTCCAACAACACTTCCCCATTTCCCATCCTCCACCTCAAAACTACTATGTTCCACCCCCTCCTCCTTATCAAGGGGATTATCATAACCACGACGTTTAG

Protein sequence

MDPKHGKRPFCSDESDEDNSFPIYSARSQHDTSAMVCALSQVINTSSGSSSRNPVLVEEHTRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDDAALRFKGNKAKLNFPERLVQQHFPISHPPPQNYYVPPPPPYQGDYHNHDV

Homology

[Close]

BLAST of Sed0013533 vs. NCBI nr
Match: XP_022921378.1 (ethylene-responsive transcription factor ERF114-like, partial [Cucurbita moschata])

HSP 1 Score: 209.5 bits (532), Expect = 2.3e-50
Identity = 120/183 (65.57%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 1   MDPKHGKRPFCSDESDEDNSFPIYSARSQHDTSAMVCALSQVINTSSGSSSRNPVLVEEH 60
           +DP  GKRPF SDE +E+N FPIYSARSQHDTSAMV AL+QVI + SG SSR+PV  +  
Sbjct: 10  VDPNRGKRPFSSDELEEENPFPIYSARSQHDTSAMVSALAQVITSGSG-SSRSPVEAD-- 69

Query: 61  TRTTWPQSQPAAVDTDAELGSGTMM---KRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 120
               WPQSQ AA D +   GS T M   +RHYRGVRQRPWGKWAAEIRDPKKAARVWLGT
Sbjct: 70  ---YWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 129

Query: 121 FDTAEAAALAYDDAALRFKGNKAKLNFPERLVQQHFPISHPPPQNYYVPPPPPYQGDYHN 180
           FDTAEAAALAYD+AALRFKG KAKLNFPERL       + P P     PPP  Y   ++N
Sbjct: 130 FDTAEAAALAYDEAALRFKGTKAKLNFPERL-------TTPCP-----PPPYAYHHHHNN 174

[Close]

BLAST of Sed0013533 vs. NCBI nr
Match: KGN63431.1 (hypothetical protein Csa_013280 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 5.1e-45
Identity = 113/181 (62.43%), Postives = 125/181 (69.06%), Query Frame = 0


Query: 1   MDPKHGKRPFCSDESDEDNSFPIYSARSQHDTSAMVCALSQVINTSSGS---SSRNPVLV 60
           +DPK GKR  CSDES+E+N FPIYSARS++DTSAMV AL+QVI + SGS   SSR+  +V
Sbjct: 54  VDPKRGKRALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSGSGSGSGSSRSLSVV 113

Query: 61  EEHTRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 120
           EE          PAA              RHYRGVRQRPWGKWAAEIRDPKKAARVWLGT
Sbjct: 114 EE----------PAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 173

Query: 121 FDTAEAAALAYDDAALRFKGNKAKLNFPERLVQQHFPISHPPPQNYYVPPPPPYQGDYHN 179
           FDTAEAAALAYD+AALRFKG KAKLNFPERL       + PP   Y    P  +Q DY N
Sbjct: 174 FDTAEAAALAYDEAALRFKGTKAKLNFPERL-------TTPPSYPY---APYHHQDDYQN 214

[Close]

BLAST of Sed0013533 vs. NCBI nr
Match: XP_031131894.1 (ethylene-responsive transcription factor ERF114, partial [Ipomoea triloba])

HSP 1 Score: 184.9 bits (468), Expect = 6.2e-43
Identity = 100/156 (64.10%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 1   MDPKHGKRPFCSDESDE------DNSFPIYSARSQHDTSAMVCALSQVI--NTSSGSSSR 60
           +D +HGKRPF SDE++E      ++ FP+YSARS HD +AMV ALSQVI  N ++ +S  
Sbjct: 2   VDRQHGKRPFSSDEAEEKEGSTAESIFPVYSARSLHDMTAMVSALSQVIGNNNTTATSQP 61

Query: 61  NPVLVEEHTRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGKWAAEIRDPKKAAR 120
           NP L   H  +  PQ+Q   +    +  +G   KRHYRGVRQRPWGKWAAEIRDPKKAAR
Sbjct: 62  NPTL---HGNSLLPQTQQPNIQ---QQEAGGQRKRHYRGVRQRPWGKWAAEIRDPKKAAR 121

Query: 121 VWLGTFDTAEAAALAYDDAALRFKGNKAKLNFPERL 149
           VWLGTFDTAEAAALAYD+AALRFKGNKAKLNFPER+
Sbjct: 122 VWLGTFDTAEAAALAYDEAALRFKGNKAKLNFPERV 151

[Close]

BLAST of Sed0013533 vs. NCBI nr
Match: XP_022135398.1 (ethylene-responsive transcription factor ERF114 [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 1.8e-42
Identity = 105/184 (57.07%), Postives = 125/184 (67.93%), Query Frame = 0


Query: 5   HGKRPFCSDESDEDNS--FPIYSARSQHDTSAMVCALSQVINTSSGSSSRNPVLVEEHTR 64
           HGKR  CSD+  E+    FP+YSARSQHD SAMVCAL++VI      S+R P    +HT 
Sbjct: 2   HGKRTVCSDDESEEEKALFPMYSARSQHDMSAMVCALAEVI-----KSNRTP---SDHTT 61

Query: 65  TTWPQSQPAAVDTDAELGSG--TMMKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT 124
           +     QP   + + + GSG     +RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT
Sbjct: 62  SQPQPPQPQPHEDNDQQGSGGSCSRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT 121

Query: 125 AEAAALAYDDAALRFKGNKAKLNFPERLVQQ--HFPISHPPPQN---YYVPPPPPYQGDY 180
           AEAAALAYD AAL FKG KAKLNFPERL  Q  +F  + PPP     ++  PPP +   +
Sbjct: 122 AEAAALAYDQAALSFKGTKAKLNFPERLQPQPHNFFFNAPPPHPHNLFFNAPPPTFNSSH 177

[Close]

BLAST of Sed0013533 vs. NCBI nr
Match: XP_015163844.1 (PREDICTED: ethylene-responsive transcription factor ERF114-like [Solanum tuberosum])

HSP 1 Score: 182.2 bits (461), Expect = 4.0e-42
Identity = 98/172 (56.98%), Postives = 118/172 (68.60%), Query Frame = 0


Query: 1   MDPKHGKRPFCSDESDE-----DNSFPIYSARSQHDTSAMVCALSQVINTSSGSSSRNPV 60
           +D ++GKRPF S+ES+E     ++ FPIYSARSQHD SAMV  LSQVI  ++ S++   +
Sbjct: 74  VDRRYGKRPFSSNESEEKEDINESIFPIYSARSQHDMSAMVSVLSQVIGNTNNSNNTTNI 133

Query: 61  LVEEHTRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGKWAAEIRDPKKAARVWL 120
                     P + P +     +       KRHYRGVRQRPWGKWAAEIRDPKKAARVWL
Sbjct: 134 SSSSSVHGINPLTLPQSTTNQIQEQGNEQRKRHYRGVRQRPWGKWAAEIRDPKKAARVWL 193

Query: 121 GTFDTAEAAALAYDDAALRFKGNKAKLNFPERLVQ---QHFPISHPPPQNYY 165
           GTFDTAEAAALAYD+AALRFKGNKAKLNFPER+     Q+   +H   Q +Y
Sbjct: 194 GTFDTAEAAALAYDEAALRFKGNKAKLNFPERVQSGNTQYLTTTHQQQQQHY 245

[Close]

BLAST of Sed0013533 vs. ExPASy Swiss-Prot
Match: Q9FH54 (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-41
Identity = 86/148 (58.11%), Postives = 106/148 (71.62%), Query Frame = 0


Query: 5   HGKRPFCSDESDE----DNSFPIYSARSQHDTSAMVCALSQVINTSSGSSSRNPVLVEEH 64
           +GKRPF  DES+E    +N FP++SARSQHD   MV AL+QVI      S  N   ++++
Sbjct: 2   YGKRPFGGDESEEREEDENLFPVFSARSQHDMRVMVSALTQVIGNQQSKSHDNISSIDDN 61

Query: 65  TRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT 124
             + +    P           G + +RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+T
Sbjct: 62  YPSVYNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFET 121

Query: 125 AEAAALAYDDAALRFKGNKAKLNFPERL 149
           AE+AALAYD+AAL+FKG+KAKLNFPER+
Sbjct: 122 AESAALAYDEAALKFKGSKAKLNFPERV 149

[Close]

BLAST of Sed0013533 vs. ExPASy Swiss-Prot
Match: Q9LY29 (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 GN=ERF115 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.0e-41
Identity = 95/167 (56.89%), Postives = 110/167 (65.87%), Query Frame = 0


Query: 5   HGKRPFCSDESDE-------DNSFPIYSARSQHDTSAMVCALSQVINTSSGSSSRNPVLV 64
           +GKRPF  DESDE       +N FP +SARSQ+D  AMV AL+QVI   S S   N    
Sbjct: 7   YGKRPFRGDESDEKKEADDDENIFPFFSARSQYDMRAMVSALTQVIGNQSSSHDNN---- 66

Query: 65  EEHTRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 124
            +H    + Q  P       +   G + KRHYRGVRQRPWGKWAAEIRDP+KAARVWLGT
Sbjct: 67  -QHQPVVYNQQDPNPPAPPTQ-DQGLLRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGT 126

Query: 125 FDTAEAAALAYDDAALRFKGNKAKLNFPERLVQQHFPISHPPPQNYY 165
           F+TAEAAALAYD+AAL+FKG+KAKLNFPER        +   P NYY
Sbjct: 127 FETAEAAALAYDNAALKFKGSKAKLNFPERAQLASNTSTTTGPPNYY 167

[Close]

BLAST of Sed0013533 vs. ExPASy Swiss-Prot
Match: Q9FGF8 (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN=ABR1 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-26
Identity = 65/109 (59.63%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 40  SQVINTSSGSSSRNPVLVEEHTRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGK 99
           S+V   SS  S   P    E+T T    S+ ++        SG   +R YRGVRQRPWGK
Sbjct: 145 SKVREASSNMSGPGPTY--EYTTTATASSETSSF-------SGDQPRRRYRGVRQRPWGK 204

Query: 100 WAAEIRDPKKAARVWLGTFDTAEAAALAYDDAALRFKGNKAKLNFPERL 149
           WAAEIRDP KAARVWLGTFD AE+AA AYD+AALRF+GNKAKLNFPE +
Sbjct: 205 WAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENV 244

[Close]

BLAST of Sed0013533 vs. ExPASy Swiss-Prot
Match: Q9LYU3 (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-26
Identity = 78/141 (55.32%), Postives = 91/141 (64.54%), Query Frame = 0


Query: 35  MVCALSQVINTSSGSSSRNPVLVEEHTRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQ 94
           MV ALS+VI   +     +P + +E  ++   Q QP   D D         +RHYRGVRQ
Sbjct: 1   MVSALSRVIENPT-----DPPVKQELDKS--DQHQP---DQDQP------RRRHYRGVRQ 60

Query: 95  RPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDDAALRFKGNKAKLNFPERL--VQQH 154
           RPWGKWAAEIRDPKKAARVWLGTF+TAE AALAYD AAL+FKG KAKLNFPER+      
Sbjct: 61  RPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTT 120

Query: 155 FPISHPP---PQNYYVPPPPP 171
             ISH P    ++   PPP P
Sbjct: 121 TTISHAPRGVSESMNSPPPRP 125

[Close]

BLAST of Sed0013533 vs. ExPASy Swiss-Prot
Match: Q70II3 (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 5.5e-26
Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 86  KRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDDAALRFKGNKAKLNFP 145
           KR YRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAA AYD+AALRF+GNKAKLNFP
Sbjct: 74  KRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133

Query: 146 ERLVQQHFPISHPPPQNYYVPPPPP 171
           E +                +PPPPP
Sbjct: 134 EDV--------------RILPPPPP 144

[Close]

BLAST of Sed0013533 vs. ExPASy TrEMBL
Match: A0A6J1E3R5 (ethylene-responsive transcription factor ERF114-like OS=Cucurbita moschata OX=3662 GN=LOC111429666 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.1e-50
Identity = 120/183 (65.57%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 1   MDPKHGKRPFCSDESDEDNSFPIYSARSQHDTSAMVCALSQVINTSSGSSSRNPVLVEEH 60
           +DP  GKRPF SDE +E+N FPIYSARSQHDTSAMV AL+QVI + SG SSR+PV  +  
Sbjct: 10  VDPNRGKRPFSSDELEEENPFPIYSARSQHDTSAMVSALAQVITSGSG-SSRSPVEAD-- 69

Query: 61  TRTTWPQSQPAAVDTDAELGSGTMM---KRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 120
               WPQSQ AA D +   GS T M   +RHYRGVRQRPWGKWAAEIRDPKKAARVWLGT
Sbjct: 70  ---YWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 129

Query: 121 FDTAEAAALAYDDAALRFKGNKAKLNFPERLVQQHFPISHPPPQNYYVPPPPPYQGDYHN 180
           FDTAEAAALAYD+AALRFKG KAKLNFPERL       + P P     PPP  Y   ++N
Sbjct: 130 FDTAEAAALAYDEAALRFKGTKAKLNFPERL-------TTPCP-----PPPYAYHHHHNN 174

[Close]

BLAST of Sed0013533 vs. ExPASy TrEMBL
Match: A0A0A0LTV8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G000550 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.5e-45
Identity = 113/181 (62.43%), Postives = 125/181 (69.06%), Query Frame = 0


Query: 1   MDPKHGKRPFCSDESDEDNSFPIYSARSQHDTSAMVCALSQVINTSSGS---SSRNPVLV 60
           +DPK GKR  CSDES+E+N FPIYSARS++DTSAMV AL+QVI + SGS   SSR+  +V
Sbjct: 54  VDPKRGKRALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSGSGSGSGSSRSLSVV 113

Query: 61  EEHTRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 120
           EE          PAA              RHYRGVRQRPWGKWAAEIRDPKKAARVWLGT
Sbjct: 114 EE----------PAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 173

Query: 121 FDTAEAAALAYDDAALRFKGNKAKLNFPERLVQQHFPISHPPPQNYYVPPPPPYQGDYHN 179
           FDTAEAAALAYD+AALRFKG KAKLNFPERL       + PP   Y    P  +Q DY N
Sbjct: 174 FDTAEAAALAYDEAALRFKGTKAKLNFPERL-------TTPPSYPY---APYHHQDDYQN 214

[Close]

BLAST of Sed0013533 vs. ExPASy TrEMBL
Match: A0A6J1C4P8 (ethylene-responsive transcription factor ERF114 OS=Momordica charantia OX=3673 GN=LOC111007360 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 8.7e-43
Identity = 105/184 (57.07%), Postives = 125/184 (67.93%), Query Frame = 0


Query: 5   HGKRPFCSDESDEDNS--FPIYSARSQHDTSAMVCALSQVINTSSGSSSRNPVLVEEHTR 64
           HGKR  CSD+  E+    FP+YSARSQHD SAMVCAL++VI      S+R P    +HT 
Sbjct: 2   HGKRTVCSDDESEEEKALFPMYSARSQHDMSAMVCALAEVI-----KSNRTP---SDHTT 61

Query: 65  TTWPQSQPAAVDTDAELGSG--TMMKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT 124
           +     QP   + + + GSG     +RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT
Sbjct: 62  SQPQPPQPQPHEDNDQQGSGGSCSRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT 121

Query: 125 AEAAALAYDDAALRFKGNKAKLNFPERLVQQ--HFPISHPPPQN---YYVPPPPPYQGDY 180
           AEAAALAYD AAL FKG KAKLNFPERL  Q  +F  + PPP     ++  PPP +   +
Sbjct: 122 AEAAALAYDQAALSFKGTKAKLNFPERLQPQPHNFFFNAPPPHPHNLFFNAPPPTFNSSH 177

[Close]

BLAST of Sed0013533 vs. ExPASy TrEMBL
Match: A0A2G2VGI3 (Ethylene-responsive transcription factor OS=Capsicum baccatum OX=33114 GN=CQW23_28395 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 9.6e-42
Identity = 102/157 (64.97%), Postives = 118/157 (75.16%), Query Frame = 0


Query: 1   MDPKHGKRPFCSDESDE-----DNSFPIYSARSQHDTSAMVCALSQVI-NTSSGSSSRN- 60
           +D +HGKRPF S+ES+E     ++ FPIYS RSQHD SAMV  LSQVI NT++ +++ N 
Sbjct: 303 VDRRHGKRPFSSNESEEKEDIDESIFPIYSERSQHDMSAMVSVLSQVIGNTNNNNATTNI 362

Query: 61  PVLVEEH--TRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGKWAAEIRDPKKAA 120
             L   H     T PQS  A  +   E G+  + KRHYRGVRQRPWGKWAAEIRDPKKAA
Sbjct: 363 SSLSSVHGINPLTLPQSAVATTNQIQEQGN-QLRKRHYRGVRQRPWGKWAAEIRDPKKAA 422

Query: 121 RVWLGTFDTAEAAALAYDDAALRFKGNKAKLNFPERL 149
           RVWLGTFDTAEAAAL YD+AALRFKGNKAKLNFPER+
Sbjct: 423 RVWLGTFDTAEAAALVYDEAALRFKGNKAKLNFPERV 458

[Close]

BLAST of Sed0013533 vs. ExPASy TrEMBL
Match: A0A164XF47 (AP2/ERF domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_016339 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.1e-41
Identity = 105/177 (59.32%), Postives = 115/177 (64.97%), Query Frame = 0


Query: 4   KHGKRPFCSD---------ESDEDNSFPIYSARSQHDTSAMVCALSQVINTSSGSSSRNP 63
           +HGKR    D         ES+ D+ FP+YSARSQ D SAMV ALSQVI  SSG      
Sbjct: 5   RHGKRALVRDGSEEKDEDHESERDSIFPVYSARSQEDMSAMVSALSQVIGASSGGQFYPS 64

Query: 64  VLVEEHTRTTW--PQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGKWAAEIRDPKKAAR 123
             V  +T  T     SQPA    D + G+  + KRHYRGVRQRPWGKWAAEIRDP KAAR
Sbjct: 65  EAVSGYTEATQQIQSSQPAR--NDDQQGNQALRKRHYRGVRQRPWGKWAAEIRDPVKAAR 124

Query: 124 VWLGTFDTAEAAALAYDDAALRFKGNKAKLNFPERLV------QQHFPISHPPPQNY 164
           VWLGTFDTAEAAA+AYDDAALRFKGNKAKLNFPER+       Q   P SH    NY
Sbjct: 125 VWLGTFDTAEAAAIAYDDAALRFKGNKAKLNFPERVTPAAPAPQSSVPPSHNKRPNY 179

[Close]

BLAST of Sed0013533 vs. TAIR 10
Match: AT5G61890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-42
Identity = 86/148 (58.11%), Postives = 106/148 (71.62%), Query Frame = 0


Query: 5   HGKRPFCSDESDE----DNSFPIYSARSQHDTSAMVCALSQVINTSSGSSSRNPVLVEEH 64
           +GKRPF  DES+E    +N FP++SARSQHD   MV AL+QVI      S  N   ++++
Sbjct: 2   YGKRPFGGDESEEREEDENLFPVFSARSQHDMRVMVSALTQVIGNQQSKSHDNISSIDDN 61

Query: 65  TRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT 124
             + +    P           G + +RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+T
Sbjct: 62  YPSVYNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFET 121

Query: 125 AEAAALAYDDAALRFKGNKAKLNFPERL 149
           AE+AALAYD+AAL+FKG+KAKLNFPER+
Sbjct: 122 AESAALAYDEAALKFKGSKAKLNFPERV 149

[Close]

BLAST of Sed0013533 vs. TAIR 10
Match: AT5G07310.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 168.7 bits (426), Expect = 4.3e-42
Identity = 95/167 (56.89%), Postives = 110/167 (65.87%), Query Frame = 0


Query: 5   HGKRPFCSDESDE-------DNSFPIYSARSQHDTSAMVCALSQVINTSSGSSSRNPVLV 64
           +GKRPF  DESDE       +N FP +SARSQ+D  AMV AL+QVI   S S   N    
Sbjct: 7   YGKRPFRGDESDEKKEADDDENIFPFFSARSQYDMRAMVSALTQVIGNQSSSHDNN---- 66

Query: 65  EEHTRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 124
            +H    + Q  P       +   G + KRHYRGVRQRPWGKWAAEIRDP+KAARVWLGT
Sbjct: 67  -QHQPVVYNQQDPNPPAPPTQ-DQGLLRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGT 126

Query: 125 FDTAEAAALAYDDAALRFKGNKAKLNFPERLVQQHFPISHPPPQNYY 165
           F+TAEAAALAYD+AAL+FKG+KAKLNFPER        +   P NYY
Sbjct: 127 FETAEAAALAYDNAALKFKGSKAKLNFPERAQLASNTSTTTGPPNYY 167

[Close]

BLAST of Sed0013533 vs. TAIR 10
Match: AT5G13330.1 (related to AP2 6l )

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 78/141 (55.32%), Postives = 91/141 (64.54%), Query Frame = 0


Query: 35  MVCALSQVINTSSGSSSRNPVLVEEHTRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQ 94
           MV ALS+VI   +     +P + +E  ++   Q QP   D D         +RHYRGVRQ
Sbjct: 1   MVSALSRVIENPT-----DPPVKQELDKS--DQHQP---DQDQP------RRRHYRGVRQ 60

Query: 95  RPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDDAALRFKGNKAKLNFPERL--VQQH 154
           RPWGKWAAEIRDPKKAARVWLGTF+TAE AALAYD AAL+FKG KAKLNFPER+      
Sbjct: 61  RPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTT 120

Query: 155 FPISHPP---PQNYYVPPPPP 171
             ISH P    ++   PPP P
Sbjct: 121 TTISHAPRGVSESMNSPPPRP 125

[Close]

BLAST of Sed0013533 vs. TAIR 10
Match: AT5G64750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 65/109 (59.63%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 40  SQVINTSSGSSSRNPVLVEEHTRTTWPQSQPAAVDTDAELGSGTMMKRHYRGVRQRPWGK 99
           S+V   SS  S   P    E+T T    S+ ++        SG   +R YRGVRQRPWGK
Sbjct: 145 SKVREASSNMSGPGPTY--EYTTTATASSETSSF-------SGDQPRRRYRGVRQRPWGK 204

Query: 100 WAAEIRDPKKAARVWLGTFDTAEAAALAYDDAALRFKGNKAKLNFPERL 149
           WAAEIRDP KAARVWLGTFD AE+AA AYD+AALRF+GNKAKLNFPE +
Sbjct: 205 WAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENV 244

[Close]

BLAST of Sed0013533 vs. TAIR 10
Match: AT5G50080.1 (ethylene response factor 110 )

HSP 1 Score: 119.0 bits (297), Expect = 3.9e-27
Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 86  KRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDDAALRFKGNKAKLNFP 145
           KR YRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAA AYD+AALRF+GNKAKLNFP
Sbjct: 74  KRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133

Query: 146 ERLVQQHFPISHPPPQNYYVPPPPP 171
           E +                +PPPPP
Sbjct: 134 EDV--------------RILPPPPP 144

The following BLAST results are available for this feature:

BLAST of Sed0013533 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921378.1	2.3e-50	65.57	ethylene-responsive transcription factor ERF114-like, partial [Cucurbita moschat...	[more]
KGN63431.1	5.1e-45	62.43	hypothetical protein Csa_013280 [Cucumis sativus]	[more]
XP_031131894.1	6.2e-43	64.10	ethylene-responsive transcription factor ERF114, partial [Ipomoea triloba]	[more]
XP_022135398.1	1.8e-42	57.07	ethylene-responsive transcription factor ERF114 [Momordica charantia]	[more]
XP_015163844.1	4.0e-42	56.98	PREDICTED: ethylene-responsive transcription factor ERF114-like [Solanum tuberos...	[more]

BLAST of Sed0013533 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH54	1.6e-41	58.11	Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LY29	6.0e-41	56.89	Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FGF8	2.5e-26	59.63	Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LYU3	2.5e-26	55.32	Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q70II3	5.5e-26	70.59	Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0013533 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E3R5	1.1e-50	65.57	ethylene-responsive transcription factor ERF114-like OS=Cucurbita moschata OX=36...	[more]
A0A0A0LTV8	2.5e-45	62.43	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G000550 PE=...	[more]
A0A6J1C4P8	8.7e-43	57.07	ethylene-responsive transcription factor ERF114 OS=Momordica charantia OX=3673 G...	[more]
A0A2G2VGI3	9.6e-42	64.97	Ethylene-responsive transcription factor OS=Capsicum baccatum OX=33114 GN=CQW23_...	[more]
A0A164XF47	2.1e-41	59.32	AP2/ERF domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DC...	[more]

BLAST of Sed0013533 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61890.1	1.1e-42	58.11	Integrase-type DNA-binding superfamily protein	[more]
AT5G07310.1	4.3e-42	56.89	Integrase-type DNA-binding superfamily protein	[more]
AT5G13330.1	1.7e-27	55.32	related to AP2 6l	[more]
AT5G64750.1	1.7e-27	59.63	Integrase-type DNA-binding superfamily protein	[more]
AT5G50080.1	3.9e-27	70.59	ethylene response factor 110	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 89..100 score: 76.67 coord: 111..127 score: 70.7
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 88..151 e-value: 1.1E-38 score: 144.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 88..137 e-value: 9.5E-15 score: 54.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 88..145 score: 24.961143
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 88..146 e-value: 3.57717E-21 score: 80.0083
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 87..147 e-value: 2.7E-28 score: 99.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..71
None	No IPR available	PANTHER	PTHR31190:SF247	SUBFAMILY NOT NAMED	coord: 13..161
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 13..161
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 88..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013533.1	Sed0013533.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity