Sed0013505 (gene) Chayote v1

Overview


Name	Sed0013505
Type	gene
Organism	Sechium edule (Chayote v1)
Description	E3 ubiquitin-protein ligase rnf8-A isoform X1
Location	LG05: 38135355 .. 38143321 (+)
RNA-Seq Expression	Sed0013505
Synteny	Sed0013505

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAATTTTTCGCGGTAATTTCTTGAAGATCCGATGGGGGACCAACCCCACAGGCTCTCTTGCCCTAATCGACATTCCGGTGATTCTCCATCTCTCTCTCTCTCTCTGTATCCGTTTCTAAACCCTAGTTTATTCTGCAAAACTCTTACGATGTTTATGTATGCCTGAGATTTTACCCTCTCGATCTTGATAGTGTCCTGTTTCAGTTCATTCTAGCTTTTCTGGATTTGAGTATTTGAGAAAAATCTAATGTGTTTGCGTTTTCCGTTGTTTTCTACGGGATTATAAAATGGAATCTCGAACCGTGTTTGTTACTCAGCTGTTATATTCTTGAGATTTCCTTTCGATCCGGGATTTAGTGGTTTGAGTTTGCAATGTCTGTAGGCCGTCCAATTGATGGTATGGAATCTGTGGTTGCGACTGTCAGTGGCTACCATGGCACAGAAAGATTCAACCTTATCAAGATGATATCTTATACTGGTGCCAGCTATGTGGGTGCAATGTCTAGGTCTATTACTCATTTGGTAGGTTTTAATTTTATTTGCCCCTAATTTAGTCTGAAAATCACATGAGAGAATTTAAAGTAAGATATGTTTTTTCTTGGATAGTGTGTGAAAAATTGAAAGAGTAATCATTATGGCTTGCTTAAGAAACCAAAAAGTTAGGAGTTTGATCCATAGTGAATCAGTCACCACCTAGTTTAGAATTAATTTTCCATGGATTTTCTTGACATTCAAATATTGTAGGGTCAAGTAATATATCCTATGGAAATATTTGAGGTGCATAAGCTGGTCCGAACACTCGTGTCGTGGTTATCAAAAAATGAAAGAGAAAAAGTAGAGACTTACGAAGCAATTAAATTATTTTTTGGGGGTATAATTATGCAGTATTTATCAGTCACACACTGCATTCTTTACCTTTAAAATGATGTTAATTATTGCTGTATTCTTTTATGGTGGTTAGATTTGTTGGGAATTGGAAGGGAGGAAATTTAATCTTGCTAAGAAGTTCAAAACAATAATAGTCAATCATCGCTGGCTTGAAGATTGTATCAAACAAGGAAGGCGTGTCCCAGAAGGCCCTTACATTCTTCAAAGGTATAATATTCAATTTAATGTAGTGGGTTATTTTTTCTTCATACAGAAAGGAATAACATATTGTCATAACTCATAATTTAACTGGTAGAAGGTGTTTTAATGTGAAATTGTAGAGTGATTATAAATAAGGGGTTATTTTTAGTGATTACAATAGCTCGTTTGTATATAATTATTTGAAGAGGAGTTGTAAAAACTCATTTATAATAGCTAAATTACCTTAAACAAACACCCTGTAGGGGTTTTGTCTAAACACATTACGACTAGTACAAAGACTCGAGAGTATATCTAGTTTGTGCTCTGAGTAAAAAGATCTCTTTTTAAGCCATCAAGGCAAACATATATACAAAACGTGCAATGAGGAACATTTAATAAACAAATAACAAAAATTGCATTGAAATCAAATCGAATACATTTCAAACAAGCCGAAGGATGTTGTAGAAGGATAAAAGCTATTTTCCTTATTTTCAAATATCACTTTCTTTCTTAAAAATGTTATGCTATTTGGTATAGACTTGGTGAAATACAATAATCTAAAACAATATGTGATCGGTTTTACTTCTATGATATAAATGAATTAAGGTATTTGCTAATCTTTCATTGGTGAAATGTTTTGAGCTATAAAAGACCATATATAGTTTTTGAAGTATTATGTTTTACAAATCAAATGCATTCATCCTTTCCAGATTCTTATTGAACTCATTGCTTTACGGTCTATATCCCGTAATCATGTATATTTTAACAATTTGAAATATCCCGTAATCATGTATATTTTAACAATTTGAAATATCCCGTAATCATGTATATTTTAAATTATGGATTTTATTCCTTGCAGTGGCCAATCAGCAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGTTGAGGGTTCTGTCTCAACCAAAAAGTATGACGTGCTTTCTGAGAATTTAGATAATTGTAGAAATGTTGAAGATCAAAGGATTAAAAACATATGCTCTTTTGGTGATTCCATCGTGCCCCATTCGTGTTTGCTGGATAAGGTGATTTGAGACATTCCTCTCTCAAGATACGTGCACAAAGTATCCCGAAACTCTTACAGCCCTTTAAGTGGGAGAAATAATCAATTAATTATTTTGTTAGAACTAATATTTCAGGAAGATTTAAACTCTAGGGAAAATATTGAAGAATATGAATATTTGAACTGTTTACATTTTTTTTTCATGGATTTTAATGTAGTAAATTCAGTTGAGAAATTCATTATTTTCTCTCATTCATAGTTCTTTGTGCATGCTATTATATTAAGAAAAAAGGTAAGAATTCATTATTTATCTAAAGGCAGTGCTCATTACTAATCCTTTTAATTTTAATCCCATCTAGGATCTGTACTCTGATTTTAGAAAGAGCAACGACACTGCTCGTAAACCTAAGTACAAATTGCAGAAGGGAATTTCTAAGCATGATGACCCATCAAGCTCAAGTAGCAGAAACCATTTTCAGGAACTGGGTCCCTCTGGATTTCTTGCAATTGAGGTAAGATATATCATTCTTCTTTCCATCTCACATTTTGAAATCCATTCATTTCGTTCACATGGCTATTCTTGATAGGAATAGGTGCGCTTCTTTTGAAGTTCATGTCTAAAATCTGTGCAAATATCTCATATTAGCCCAAGGTTTATATCTAATTAGAAATATATGTTCTACTAATGTATGCAAGTATTTTTCTTTGATTAAGTAATGTGATCGGGTTCTAATAGTCTAATTGTAGGTTGATGACAATATGTTTTGATTAAACGTCCAATAGGCATTTGTAGTTAAGCGTTTGAAAGTGATTTACAACCTTTCAAAACGTAGAAGATGCACATTTCACGGTTAAACTTCCAATAGTTTGAAGTTCCACTCTCATAAAATCATAATAAATTGGCATGTTCAGATTTTATTCCTAGATCCACCTACTGCTTTGTAATGTTCTATATTCACAGAACAATACTGAAAACTTTCACTTCAACATCCAAGAATTTCAAGTTCTCTTCACCATAAACTTGTCAATCCAGAAACTGGTCGTGTCTAGGCAAGGCTGATTTTGGAATATTTTGCCTCATCTAGGAAGAATTGGAAGCTCAGTAATCCTGTCTTTTGAGCTTCTCAACTGCCATTTTGGTTTGCTTCAATGACCAGTGATTGCCAAAAACCCAAAGCATTAGTGTAGACAATACAATTTTTAACGATTTGAAGTTCTTAATCTGACTAGAAGATAATTTCAAATTGTTTGTTCCACTTTAACCATGCTTTCTCTTCTTTATGTATTTCTTTGTCCATTTTTTTGGGTAATCATTAATATTGGTAAAGAAGCATTTTACCACGCACCACATATTCTTATGTACTTTTGAACTTTTTGTTCACTGATAACTTTTGCCTTTATTTCATTTTGAAAGCGCGGTAGCTCTTCAAACTTGGTGAGAGATGCAAGAATAGGGGAAAATAGTAATCAGAACCCTGTTAAATCTTCACGAAGACAGCGGCTTGTGAATAAAAATTCCAGCGAAGATCATAATGAGCTTGACGTTTGTAATTTTGTCCCAGAGAGCTACCAATTGGGAACTCGTAAGCATGGTAATAGTGTTACAGTTTCATCTAGCCTCTTGGATGAGGAAACCGATATAGAAGTGGTAAACATTGGAGGAACGTCTGATCGTGCTCAGTTGTGTGAAAAAAGGGGACTAGCAAGTGACAGCTTTGAAGATGAAACTTGTCAGAATGAAACCACATCCAGAGATATGAACTTACCAGTTGAAAATGCATCAAGTGTCTTCACGATAACTTCAGAAGATGAGTTGGACAATATTAATGATTTACAAAGGAACATTGAAGATCCAGTCATAGAACCCAATGCAAGCCTAACCTCCACTTCAACAGAGTTATCATGTGTTATCTGTTGGACAGATTTTAGTTCGACAAGGGGAGTTTTGCCTTGTGGGCACCGGTTTTGTTATTCATGCATTCAAAACTGGGCAGATCACATGGTAAATGTTTTATTCCATTTATATACTTGGAAATTCAAGGATCCAATTAAGCCTTGTCGTAAAATTCTTTTTCTTTTTGTGCTAACGCAACACAAGTATAAAAGCTCTTATCCAAAAAACTCAAGTACAAAAAGCCAGGACCTTAGACAGCGAATTGTTAAATTTATTTGACGTAGCTATTTTGACTGCATTAACAACGTTGCATGCTTTTTGCTTTTTGACATAGCTATTTGAATTGTTATCGTAGTCATTGTCTTCTTAATTGTAATACCATATGTTTTGTAGAACTCTGGATTATGTTTCTAACTTGCTAATTAGGGCTGTGTGGCAGTCCTTTCTTTGATACATGCAATAGTAGGGACTTTCACACAAATAAGCTTGAGAACACTACCTTGCCTCCTTAATTTGTTAGTATGTTTTAGTTATATTATATAATCTCGAGAACACTTCGTTGACTCCATAATTTATTGGTATCTTTTTTCTATTCTCTCAATGTGCTGTTTATCTATTTTTGTTTTTCCAATTCGAAGGTAAAATTAATGATCTGAATCAACGTGAAATGAAATGTGTTTTAGGGATGGTAATATAGTGCGCAGAAGTTCAAGGTGGGGATTGCTTGAGCAGCGAAGGGATTAACATTTTCTTCTATAAATAGTGATCTTGATACCCTATTCCTCATTAGACTTTTTAAATACAGGATACCTTAATTGCCTGTCTTGTATAATTGTATTGGGATTCTTGAACTATTAGGCATAATCACTGTTTTGTTGAATCATTTGGTAAAGAAAAATTAGCTTGAAAATTTTGCCATTGTAGTTGCTCATGAAACATGTATCGATCTGGGAGTTAGATGTTAGCATCTCTGTCCCACATATTGTTGAACTAAAAAAGAAAACAAAAGTCAAGTTCTGCACGCTCCGACTTGATTTCTTTTCCTAAGGTGTCAACTTGTCTTTGAAATTATGAACTTATTAATGGCTTTTGTTCTTTGGTCTTGTAGAATGAGTTTGCCAATCTGAATTGATTCAACTATCTTTCAAATGCTGTCAATGTTCTATTATGTGCTTTCTAGTTTGGAATCAGTATCAAATTATCAATATCCGAACAAGGTTTTGGTCTTGTAGGCTTCGAACAGAAAGGTTTCAACTTGCCCTTTGTGCAAAGCCAGTTTTGTGAGCATCACAAAGGTTGAAGATGCTGCCTCTTCGGATCAGAAGATTTACTCCCAAACAATTCCATGTGGTTCATCACTATCGGACATTTACATTCTTCCTGATGAAAGAATTCTCAACAGCAGTGTTCAGGTTACATATTTTTCTGCTCAGCGTCCTTATTCAGTGGTCTTTTTATATGTAAAGCAAGCCAATGAAACACAAGCATCTCATTTTCAAGAATTATTTATGATTTTGGTTACATGTAACATCAATAGGAGGATAACCATCATGCGTTGATCTAGTGGTCAAGAGGTTTTGGGAAACCAAAAAGTAGTTACCTAGCAATTTATTTTTTACGGGTTTCCTTTGACAACCAAATGTTATAGGGTCCAACGGTTTGTCCCATGAGAATAGTTGAGGTGTGCATAAGTAAGTCTGAATGGATATCTAAAAACATGTAGCATCAATAGGAAAACTCCGTATGGTTGTGCACTCTTGGTTTTTGAGTTTCATAGTTATTTTATATTTATCACGTCTTTACTATACTCGTTTCATCTCTATGGTGCATTCTATTTATTTCTGGATGTTTATAAATAAACAGCCCTCTGTAGCAGCTGTTTGTAGTGCATGCCGATGTCGTGAACCAGAGGATCTGCTCATGAGCTGCCATCTTTGCCAGTTTCGACATATTCACTCATACTGTTTGGACCCGCCTTTGTTACCATGGACTTGTATTCACTGTAAGGATTTGCAGGCAATCTACCATCGAAGATATTAATTTGTTGTCTACAAATCAGGTAACTTGCTTACACTAATTCTATCGTGTTGTTCTGTATACTTTTCAAAATTTATCTGAGTTGACTATTGGTAGATTTTTCTGTTGGGAAGTTGTATTAAAGGTAAAGGGTAGCGTACGGGTTCAACTTGTCCTGAGAGAGTTTTTATGCCAAACGATCCAATTTGTCCACCTGGTTAGCCTGAAACGTTGATAATATTCCATTTCTTATCAAACAAAACTTGCCTCCTAACTAATAAATAGAGATGGTTAAAATACAACTTTTATCCCTGGGTCGTGTTCCACTTTGGTCCTTCATCCCATTCCTTGTAATTTCGAATGTTTAATTTTATTTTAATTCAAGTGGGTCTCCATAATTAACTTTTCTTAAAAAGATACTTAATATTAGTTTTTCTTCTATAAATTTTAGAAATATGTTCCTCTCGTATTACAATTTTTATTATTGAATCAGTTAAAAAAATAATAATTCTAAGCTTATCATGCAGAAAGCACAAAAACTAAAATTAAACATTTGAAATTAGAAGAACCAAAATAATTATAGAACGAACTCCACTGTTCCCCAGAAAACCTCTCACGAAGCTTTCTTCCTTCTCAACTCTCTATGTGAAACCTTAAACCTTAAGCTTGTCACAGCTCCTTCTGTGCCAGGGAGGAGGATAGGTAGCCTCTTTGCGTGCACTTTTTGGCAGACCTCCCCCACATCTCGGGTGCCCCTGCCATTGGCTTCAGTCGGGAGAGTCCTCCACAACGACCTTCAATGTTCACGCTCCTCCTTTCATGTCCCATGCTGCCGCAACCTTCCGAGTCACCGACATTGGTGTATCTTCTCTTTCAATGGCCGAAACTCCTCCCTGTTGTCACCAAGATCAGCTTTTTCGACATTAGATCTGTTTTTTTTTTCTCTATTGGATGACACAAACTCTGCAAATCACACTTCATCTTTGCTGGAGCAATATCAATCTGTTTCATTAGATATTTACAATGGTAGCTCTCCTCTCCTCTCGGATTACCCCAATCGCCACCTGTATTGCTGTTTGGACATCTTCTCTGGAAAGCTCGGGCTTCGTGTACTTGTTTTTGCAACTGTGGTAAAACAAAGAAACATGGAAAATTTTCCTCTTTGTCGGGATCAACTATCTTCACTAACATGTTTATCATCATCTCCACAACATATTAATGGTTATTCTCAATTTGTTTATACCATTTAAACCATTAATAATTCTTGTGTGTCACTGTATTCGACCACTTTCTTTTCCTCTGTTTTGCAAACATCGTAACACTTTCACATCCATCAACGAAATACTTTCATTTCTTATAAAAATAGAACAATCGCCGTACTACGCAAACCAAATTGATATTTAAACCATAACTTGTATTGGGTTACTTTTATTGCATTTTGCAAATAATTATCCACTTATCACTTACCAACTTTTTTTTAGTACAACAATATTTGAGGGTTGTAGGGTTCAAACCTACCACCTTTATATTGAGGATACTTGTCAATTACTACTGGCTCAACTCGTTTTGACTCACTTACTAACCTCGATTGCTTTGTGCATAAGCATATTTCTACCATTCTCCCTTTATTACCATCTTAAGCACATGATATTTATTTCTACCATTCTCCTTTGTGTTGAAGCTTTACAATTACAATGATTGGCAATGAATTGTGTTTTTGTTTAGGTGACTGCACAGAGCAAATGGAAAGACAATTGAAGTTAGCTGAAGATTTTGAATTAAAGAAAAACCAACATGTTTCTCACAAATCTTCACTGCCAAGTTTGTGCCCAACACTCATTATTGTTATTATACTGAAAAGTTTCAATTTGCCTGGCTGTTATGATGTGGTTTTTTAAATCCAATGTTTACTTACAGTTACACTTGACCGAAAGAAGAGACTAATAATAATAATAATCAATCATCCG

mRNA sequence

CTAATTTTTCGCGGTAATTTCTTGAAGATCCGATGGGGGACCAACCCCACAGGCTCTCTTGCCCTAATCGACATTCCGGCCGTCCAATTGATGGTATGGAATCTGTGGTTGCGACTGTCAGTGGCTACCATGGCACAGAAAGATTCAACCTTATCAAGATGATATCTTATACTGGTGCCAGCTATGTGGGTGCAATGTCTAGGTCTATTACTCATTTGATTTGTTGGGAATTGGAAGGGAGGAAATTTAATCTTGCTAAGAAGTTCAAAACAATAATAGTCAATCATCGCTGGCTTGAAGATTGTATCAAACAAGGAAGGCGTGTCCCAGAAGGCCCTTACATTCTTCAAAGTGGCCAATCAGCAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGTTGAGGGTTCTGTCTCAACCAAAAAGTATGACGTGCTTTCTGAGAATTTAGATAATTGTAGAAATGTTGAAGATCAAAGGATTAAAAACATATGCTCTTTTGGTGATTCCATCGTGCCCCATTCGTGTTTGCTGGATAAGGATCTGTACTCTGATTTTAGAAAGAGCAACGACACTGCTCGTAAACCTAAGTACAAATTGCAGAAGGGAATTTCTAAGCATGATGACCCATCAAGCTCAAGTAGCAGAAACCATTTTCAGGAACTGGGTCCCTCTGGATTTCTTGCAATTGAGCGCGGTAGCTCTTCAAACTTGGTGAGAGATGCAAGAATAGGGGAAAATAGTAATCAGAACCCTGTTAAATCTTCACGAAGACAGCGGCTTGTGAATAAAAATTCCAGCGAAGATCATAATGAGCTTGACGTTTGTAATTTTGTCCCAGAGAGCTACCAATTGGGAACTCGTAAGCATGGTAATAGTGTTACAGTTTCATCTAGCCTCTTGGATGAGGAAACCGATATAGAAGTGGTAAACATTGGAGGAACGTCTGATCGTGCTCAGTTGTGTGAAAAAAGGGGACTAGCAAGTGACAGCTTTGAAGATGAAACTTGTCAGAATGAAACCACATCCAGAGATATGAACTTACCAGTTGAAAATGCATCAAGTGTCTTCACGATAACTTCAGAAGATGAGTTGGACAATATTAATGATTTACAAAGGAACATTGAAGATCCAGTCATAGAACCCAATGCAAGCCTAACCTCCACTTCAACAGAGTTATCATGTGTTATCTGTTGGACAGATTTTAGTTCGACAAGGGGAGTTTTGCCTTGTGGGCACCGGTTTTGTTATTCATGCATTCAAAACTGGGCAGATCACATGGCTTCGAACAGAAAGGTTTCAACTTGCCCTTTGTGCAAAGCCAGTTTTGTGAGCATCACAAAGGTTGAAGATGCTGCCTCTTCGGATCAGAAGATTTACTCCCAAACAATTCCATGTGGTTCATCACTATCGGACATTTACATTCTTCCTGATGAAAGAATTCTCAACAGCAGTGTTCAGCCCTCTGTAGCAGCTGTTTGTAGTGCATGCCGATGTCGTGAACCAGAGGATCTGCTCATGAGCTGCCATCTTTGCCAGTTTCGACATATTCACTCATACTGTTTGGACCCGCCTTTGTTACCATGGACTTGTATTCACTGTAAGGATTTGCAGGCAATCTACCATCGAAGATATTAATTTGTTGTCTACAAATCAGGTGACTGCACAGAGCAAATGGAAAGACAATTGAAGTTAGCTGAAGATTTTGAATTAAAGAAAAACCAACATGTTTCTCACAAATCTTCACTGCCAAGTTTGTGCCCAACACTCATTATTGTTATTATACTGAAAAGTTTCAATTTGCCTGGCTGTTATGATGTGGTTTTTTAAATCCAATGTTTACTTACAGTTACACTTGACCGAAAGAAGAGACTAATAATAATAATAATCAATCATCCG

Coding sequence (CDS)

ATGGGGGACCAACCCCACAGGCTCTCTTGCCCTAATCGACATTCCGGCCGTCCAATTGATGGTATGGAATCTGTGGTTGCGACTGTCAGTGGCTACCATGGCACAGAAAGATTCAACCTTATCAAGATGATATCTTATACTGGTGCCAGCTATGTGGGTGCAATGTCTAGGTCTATTACTCATTTGATTTGTTGGGAATTGGAAGGGAGGAAATTTAATCTTGCTAAGAAGTTCAAAACAATAATAGTCAATCATCGCTGGCTTGAAGATTGTATCAAACAAGGAAGGCGTGTCCCAGAAGGCCCTTACATTCTTCAAAGTGGCCAATCAGCAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGTTGAGGGTTCTGTCTCAACCAAAAAGTATGACGTGCTTTCTGAGAATTTAGATAATTGTAGAAATGTTGAAGATCAAAGGATTAAAAACATATGCTCTTTTGGTGATTCCATCGTGCCCCATTCGTGTTTGCTGGATAAGGATCTGTACTCTGATTTTAGAAAGAGCAACGACACTGCTCGTAAACCTAAGTACAAATTGCAGAAGGGAATTTCTAAGCATGATGACCCATCAAGCTCAAGTAGCAGAAACCATTTTCAGGAACTGGGTCCCTCTGGATTTCTTGCAATTGAGCGCGGTAGCTCTTCAAACTTGGTGAGAGATGCAAGAATAGGGGAAAATAGTAATCAGAACCCTGTTAAATCTTCACGAAGACAGCGGCTTGTGAATAAAAATTCCAGCGAAGATCATAATGAGCTTGACGTTTGTAATTTTGTCCCAGAGAGCTACCAATTGGGAACTCGTAAGCATGGTAATAGTGTTACAGTTTCATCTAGCCTCTTGGATGAGGAAACCGATATAGAAGTGGTAAACATTGGAGGAACGTCTGATCGTGCTCAGTTGTGTGAAAAAAGGGGACTAGCAAGTGACAGCTTTGAAGATGAAACTTGTCAGAATGAAACCACATCCAGAGATATGAACTTACCAGTTGAAAATGCATCAAGTGTCTTCACGATAACTTCAGAAGATGAGTTGGACAATATTAATGATTTACAAAGGAACATTGAAGATCCAGTCATAGAACCCAATGCAAGCCTAACCTCCACTTCAACAGAGTTATCATGTGTTATCTGTTGGACAGATTTTAGTTCGACAAGGGGAGTTTTGCCTTGTGGGCACCGGTTTTGTTATTCATGCATTCAAAACTGGGCAGATCACATGGCTTCGAACAGAAAGGTTTCAACTTGCCCTTTGTGCAAAGCCAGTTTTGTGAGCATCACAAAGGTTGAAGATGCTGCCTCTTCGGATCAGAAGATTTACTCCCAAACAATTCCATGTGGTTCATCACTATCGGACATTTACATTCTTCCTGATGAAAGAATTCTCAACAGCAGTGTTCAGCCCTCTGTAGCAGCTGTTTGTAGTGCATGCCGATGTCGTGAACCAGAGGATCTGCTCATGAGCTGCCATCTTTGCCAGTTTCGACATATTCACTCATACTGTTTGGACCCGCCTTTGTTACCATGGACTTGTATTCACTGTAAGGATTTGCAGGCAATCTACCATCGAAGATATTAA

Protein sequence

MGDQPHRLSCPNRHSGRPIDGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKQGRRVPEGPYILQSGQSAGPLSMKLPLAVEGSVSTKKYDVLSENLDNCRNVEDQRIKNICSFGDSIVPHSCLLDKDLYSDFRKSNDTARKPKYKLQKGISKHDDPSSSSSRNHFQELGPSGFLAIERGSSSNLVRDARIGENSNQNPVKSSRRQRLVNKNSSEDHNELDVCNFVPESYQLGTRKHGNSVTVSSSLLDEETDIEVVNIGGTSDRAQLCEKRGLASDSFEDETCQNETTSRDMNLPVENASSVFTITSEDELDNINDLQRNIEDPVIEPNASLTSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTCPLCKASFVSITKVEDAASSDQKIYSQTIPCGSSLSDIYILPDERILNSSVQPSVAAVCSACRCREPEDLLMSCHLCQFRHIHSYCLDPPLLPWTCIHCKDLQAIYHRRY

Homology

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BLAST of Sed0013505 vs. NCBI nr
Match: XP_038887153.1 (uncharacterized protein LOC120077302 [Benincasa hispida])

HSP 1 Score: 811.6 bits (2095), Expect = 4.0e-231
Identity = 414/529 (78.26%), Postives = 457/529 (86.39%), Query Frame = 0


Query: 8   LSCPNRHSGRPIDGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWEL 67
           LSCPNR  G PI+GMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWEL
Sbjct: 14  LSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWEL 73

Query: 68  EGRKFNLAKKFKTIIVNHRWLEDCIKQGRRVPEGPYILQSGQSAGPLSMKLPLAVEGSVS 127
           +GRKFNLAKKF+TIIVNHRWLEDCIK G+RVPEGPY+LQSGQ AGPLSMKLPLA +GSVS
Sbjct: 74  QGRKFNLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYVLQSGQLAGPLSMKLPLAEKGSVS 133

Query: 128 TKKYDVLSENLDNCRNVEDQRIKNICSFGDSIVPHSCLLDKDLYSDFRKSNDTARKPKYK 187
           TKK ++L E L N  NV+DQ IK+ICSF DSI+PHS LLDKDLYSDFR S+ TA K K  
Sbjct: 134 TKKNNLLCEKLHNYGNVDDQSIKDICSFDDSILPHSSLLDKDLYSDFRNSDVTAHKAKDI 193

Query: 188 LQKGISKHDDPSSSSSRNHFQELGPSGFLAIERGSSSNLVRDARIGENSNQ-NPVKSSRR 247
           L++ ISK +D SSSSSRNHF+E  PSGF AIERGSSS L RD R GE+SNQ + V SSRR
Sbjct: 194 LRRRISKQEDSSSSSSRNHFEEPTPSGFFAIERGSSSRLARDERKGESSNQDSTVNSSRR 253

Query: 248 -QRLVNKNSSEDHNELDVCNFVPESYQLGTRKHGNSVTVSSSLLDEETDIEVVNIGGTSD 307
            +RLVNKNS+EDHN+ D+ NF      LGTR   NS+T  SS  D+ET+IEVVNIGGTSD
Sbjct: 254 CRRLVNKNSTEDHNKADIWNFDLRRNHLGTR---NSLTGPSSHWDDETNIEVVNIGGTSD 313

Query: 308 RAQLCEKRGLASDSFED-ETCQNETTSRDMNLPVENASSVFTITSEDELDNINDLQRNIE 367
           R QL ++RGL+SDSFE  E C++++TSRD NL VENA    +ITSEDEL NIN+LQ+NIE
Sbjct: 314 RDQLWDERGLSSDSFEGIEACEDQSTSRDTNLQVENAPRGSSITSEDELHNINNLQKNIE 373

Query: 368 DPVIEPNASLTSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTC 427
           DPVIE NASL STSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMA +RK+STC
Sbjct: 374 DPVIELNASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMALSRKISTC 433

Query: 428 PLCKASFVSITKVEDAASSDQKIYSQTIPCGSSLSDIYILPDERILNSSVQPSVAAVCSA 487
           PLCKA+F+SITKVEDAA+SDQKIYSQTIPCG SL DIYILPDER LN+ VQPSVAAVCSA
Sbjct: 434 PLCKATFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTLNNVVQPSVAAVCSA 493

Query: 488 CRCREPEDLLMSCHLCQFRHIHSYCLDPPLLPWTCIHCKDLQAIYHRRY 534
           CRCREPEDLLMSCHLCQ RHIHSYCLDPPLLPWTCIHCKDLQ +YHR +
Sbjct: 494 CRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWTCIHCKDLQILYHRSH 539

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BLAST of Sed0013505 vs. NCBI nr
Match: XP_022983591.1 (E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima] >XP_022983592.1 E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima])

HSP 1 Score: 809.7 bits (2090), Expect = 1.5e-230
Identity = 409/527 (77.61%), Postives = 452/527 (85.77%), Query Frame = 0


Query: 10  CPNRHSGRPIDGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELEG 69
           CPNR +G PI+GMESVVATVSGYHGTERFNLIKMISYTGASYVG MSRSITHLICWELEG
Sbjct: 15  CPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSRSITHLICWELEG 74

Query: 70  RKFNLAKKFKTIIVNHRWLEDCIKQGRRVPEGPYILQSGQSAGPLSMKLPLAVEGSVSTK 129
           RKFNLAKKFKTIIVNHRWLEDCIKQG RVPE PYILQSGQSAGPLSMKLP + +GSVSTK
Sbjct: 75  RKFNLAKKFKTIIVNHRWLEDCIKQGMRVPEDPYILQSGQSAGPLSMKLPFSDKGSVSTK 134

Query: 130 KYDVLSENLDNCRNVEDQRIKNICSFGDSIVPHSCLLDKDLYSDFRKSNDTARKPKYKLQ 189
           KY V SE L NC NVEDQRIK +CSFGDSI+PHS LLDK++Y DFR S+DTA K K+KL+
Sbjct: 135 KYKVPSEKLHNCGNVEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNSDDTAHKQKHKLR 194

Query: 190 KGISKHDDPSSSSSRNHFQELGPSGFLAIERGSSSNLVRDARIGENSNQN-PVKSSRR-Q 249
           K ISK ++PSSSSS+NHF+E  PS F AI  GSSS+L RD   G+  N+N  V+SSRR +
Sbjct: 195 KRISKLEEPSSSSSKNHFKEPTPSDFFAIGCGSSSSLARDETKGKRYNENSTVRSSRRWR 254

Query: 250 RLVNKNSSEDHNELDVCNFVPESYQLGTRKHGNSVTVSSSLLDEETDIEVVNIGGTSDRA 309
           RLV KNSSEDHN+ DV NF PE Y L TR   NS+TV SS  D+ETD EVVN+GGT+DR 
Sbjct: 255 RLVKKNSSEDHNDPDVWNFDPEQYHLATR---NSLTVLSSHCDDETDTEVVNVGGTADRD 314

Query: 310 QLCEKRGLASDSFED-ETCQNETTSRDMNLPVENASSVFTITSEDELDNINDLQRNIEDP 369
           QLC++RGLASDSFE  E C+N++TSR  NL VENA  + T+TSEDEL    DLQ+ IEDP
Sbjct: 315 QLCDERGLASDSFEGVEACENQSTSRHTNLLVENAPRILTVTSEDELH--KDLQKIIEDP 374

Query: 370 VIEPNASLTSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTCPL 429
           VIE N S+ ST+TELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAS+RK+STCPL
Sbjct: 375 VIELNESIPSTTTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASSRKISTCPL 434

Query: 430 CKASFVSITKVEDAASSDQKIYSQTIPCGSSLSDIYILPDERILNSSVQPSVAAVCSACR 489
           CKASF+SITKVEDAA+SDQKIYSQTIPCG SL DIYILPDER L+S VQPSVAAVCS CR
Sbjct: 435 CKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTLDSVVQPSVAAVCSICR 494

Query: 490 CREPEDLLMSCHLCQFRHIHSYCLDPPLLPWTCIHCKDLQAIYHRRY 534
           C+EPEDLLMSCHLCQ RHIHSYCLDPPLLPW CIHCKDLQ +YHRR+
Sbjct: 495 CQEPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

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BLAST of Sed0013505 vs. NCBI nr
Match: XP_011651366.1 (uncharacterized protein LOC101213123 [Cucumis sativus] >XP_011651367.1 uncharacterized protein LOC101213123 [Cucumis sativus] >XP_031739474.1 uncharacterized protein LOC101213123 [Cucumis sativus] >KGN57738.1 hypothetical protein Csa_011190 [Cucumis sativus])

HSP 1 Score: 807.7 bits (2085), Expect = 5.8e-230
Identity = 411/529 (77.69%), Postives = 457/529 (86.39%), Query Frame = 0


Query: 8   LSCPNRHSGRPIDGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWEL 67
           LSCPNR  G PI+GMESVV TVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWEL
Sbjct: 17  LSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWEL 76

Query: 68  EGRKFNLAKKFKTIIVNHRWLEDCIKQGRRVPEGPYILQSGQSAGPLSMKLPLAVEGSVS 127
           +GRKF+LA+KF+TIIVNHRWLEDCIK G+RVPEGPYILQSGQS GPLSMKLPLA +G VS
Sbjct: 77  QGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSIGPLSMKLPLADKGYVS 136

Query: 128 TKKYDVLSENLDNCRNVEDQRIKNICSFGDSIVPHSCLLDKDLYSDFRKSNDTARKPKYK 187
            KKY++LSE L N  NVEDQ IK+ICSFGDSI+P S LLDKDL SDFRKS+DTA K K+K
Sbjct: 137 AKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLSSDFRKSDDTAHKRKHK 196

Query: 188 LQKGISKHDDPSSSSSRNHFQELGPSGFLAIERGSSSNLVRDARIGENSNQ-NPVKSSRR 247
           ++K ISK +DPSSSSSRN F+E   +G  AIE GS S+L RD R GE+SNQ + VKSSRR
Sbjct: 197 VRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDERKGESSNQDSTVKSSRR 256

Query: 248 QR-LVNKNSSEDHNELDVCNFVPESYQLGTRKHGNSVTVSSSLLDEETDIEVVNIGGTSD 307
           +R LV+ NS EDHN+ D+ NF PE Y+LGTR   NS+TV S L D ETDIEVVNIGGTSD
Sbjct: 257 RRLLVSNNSREDHNKPDISNFDPELYRLGTR---NSLTVPSVLWDAETDIEVVNIGGTSD 316

Query: 308 RAQLCEKRGLASDSFED-ETCQNETTSRDMNLPVENASSVFTITSEDELDNINDLQRNIE 367
           R QLC++RGLAS  FE  E C+N++TS+D NL V+NA  V +ITSEDEL N+NDLQ+NIE
Sbjct: 317 REQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDELHNMNDLQKNIE 376

Query: 368 DPVIEPNASLTSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTC 427
           DPVIE +ASL STSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMA +RK+STC
Sbjct: 377 DPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMALSRKISTC 436

Query: 428 PLCKASFVSITKVEDAASSDQKIYSQTIPCGSSLSDIYILPDERILNSSVQPSVAAVCSA 487
           PLCKASF+SITKVE AA+SDQKIYSQTIPCGSSL DIY+L DER LN+ VQPSVAAVCSA
Sbjct: 437 PLCKASFLSITKVEYAATSDQKIYSQTIPCGSSLLDIYLLSDERTLNNVVQPSVAAVCSA 496

Query: 488 CRCREPEDLLMSCHLCQFRHIHSYCLDPPLLPWTCIHCKDLQAIYHRRY 534
           CRCREPEDLLMSCHLCQ R IHSYCLDPPLLPWTCIHCKDLQ +YHR +
Sbjct: 497 CRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 542

[Close]

BLAST of Sed0013505 vs. NCBI nr
Match: XP_022935568.1 (uncharacterized protein LOC111442404 [Cucurbita moschata] >XP_022935569.1 uncharacterized protein LOC111442404 [Cucurbita moschata])

HSP 1 Score: 804.3 bits (2076), Expect = 6.4e-229
Identity = 409/527 (77.61%), Postives = 447/527 (84.82%), Query Frame = 0


Query: 10  CPNRHSGRPIDGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELEG 69
           CPNR +G PI+GMESVVATVSGYHGTERFNLIKMISYTGASYVG MSRSITHLICWELEG
Sbjct: 15  CPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSRSITHLICWELEG 74

Query: 70  RKFNLAKKFKTIIVNHRWLEDCIKQGRRVPEGPYILQSGQSAGPLSMKLPLAVEGSVSTK 129
           RKFNLAKKFKTIIVNHRWLEDCIK G+RVPE PYILQSGQSAGPLSMKLP + +GSVSTK
Sbjct: 75  RKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMKLPFSDQGSVSTK 134

Query: 130 KYDVLSENLDNCRNVEDQRIKNICSFGDSIVPHSCLLDKDLYSDFRKSNDTARKPKYKLQ 189
           KY V SE L NC N+EDQRIK +CSFGDSI+PHS LLDK++Y DFR S+DTA K K+KL+
Sbjct: 135 KYTVPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNSDDTAHKQKHKLR 194

Query: 190 KGISKHDDPSSSSSRNHFQELGPSGFLAIERGSSSNLVRDARIGENSNQN-PVKSSRR-Q 249
           K ISK ++PSSSSS+NHF+E  PS F AI  GSSS+L RD   G+  N+N  V+SSRR +
Sbjct: 195 KRISKLEEPSSSSSKNHFKEPTPSDFFAIGCGSSSSLARDETKGKRYNENSTVRSSRRWR 254

Query: 250 RLVNKNSSEDHNELDVCNFVPESYQLGTRKHGNSVTVSSSLLDEETDIEVVNIGGTSDRA 309
           RLV KNSSEDHNE DV NF PE Y L  R   NS TV SS  D+ETDIE VNIGGT+D  
Sbjct: 255 RLVKKNSSEDHNEPDVWNFDPEQYHLVIR---NSPTVLSSHCDDETDIEAVNIGGTADCD 314

Query: 310 QLCEKRGLASDSFED-ETCQNETTSRDMNLPVENASSVFTITSEDELDNINDLQRNIEDP 369
           QLC++RGLASDSFE  E C N++TSR  NL VENA  + T TSEDEL   N LQ+NIED 
Sbjct: 315 QLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSEDELH--NGLQKNIEDS 374

Query: 370 VIEPNASLTSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTCPL 429
           VIE N S+ STSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAS RK+STCPL
Sbjct: 375 VIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASRRKISTCPL 434

Query: 430 CKASFVSITKVEDAASSDQKIYSQTIPCGSSLSDIYILPDERILNSSVQPSVAAVCSACR 489
           CKASF+SITKVEDAA+SDQKIYSQTIPCG+SL DIYILPDER L+S VQPSVAAVCS CR
Sbjct: 435 CKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSVVQPSVAAVCSVCR 494

Query: 490 CREPEDLLMSCHLCQFRHIHSYCLDPPLLPWTCIHCKDLQAIYHRRY 534
           CREPEDLLMSCHLCQ RHIHSYCLDPPLLPW CIHCKDLQ +YHRR+
Sbjct: 495 CREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

[Close]

BLAST of Sed0013505 vs. NCBI nr
Match: XP_022148261.1 (uncharacterized protein LOC111016967 isoform X1 [Momordica charantia] >XP_022148263.1 uncharacterized protein LOC111016967 isoform X1 [Momordica charantia])

HSP 1 Score: 803.1 bits (2073), Expect = 1.4e-228
Identity = 403/528 (76.33%), Postives = 452/528 (85.61%), Query Frame = 0


Query: 8   LSCPNRHSGRPIDGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWEL 67
           LSCPNRH G PI+GMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICW+L
Sbjct: 13  LSCPNRHYGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWKL 72

Query: 68  EGRKFNLAKKFKTIIVNHRWLEDCIKQGRRVPEGPYILQSGQSAGPLSMKLPLAVEGSVS 127
           EGRKF+LAKKFKTIIVNHRWLEDCI+QG+RVPEGPYILQSGQSAGPLS++LPLA + SVS
Sbjct: 73  EGRKFSLAKKFKTIIVNHRWLEDCIRQGKRVPEGPYILQSGQSAGPLSIELPLAAKDSVS 132

Query: 128 TKKYDVLSENLDNCRNVEDQRIKNICSFGDSIVPHSCLLDKDLYSDFRKSNDTARKPKYK 187
           T KY+VLSE   NC NVE+Q IK+I SFG +I P SCLLDKDL+SDF KS+DT+ K K+K
Sbjct: 133 TTKYNVLSEKSQNCGNVEEQSIKSIYSFG-AIWPRSCLLDKDLFSDFGKSDDTSHKSKHK 192

Query: 188 LQKGISKHDDPSSSSSRNHFQELGPSGFLAIERGSSSNLVRDARIGENSNQNP-VKSSRR 247
           L+K ISK +DPS+SSSRN+FQE  PS FL IERGSSS+L RD R GENSN +P VKSSRR
Sbjct: 193 LRKKISKQEDPSNSSSRNNFQEPTPSEFLEIERGSSSSLARDERKGENSNLSPTVKSSRR 252

Query: 248 QRLVNKNSSEDHNELDVCNFVPESYQLGTRKHGNSVTVSSSLLDEETDIEVVNIGGTSDR 307
           +RL+N+N+SEDH + DV +F PE Y LGTR HGN+ TV S  L+ E DIEVV IGG+SD 
Sbjct: 253 RRLLNRNTSEDHCKPDVWDFDPECYHLGTRNHGNNFTVLSCHLNNERDIEVVGIGGSSDH 312

Query: 308 AQLCEKRGLASDSFED-ETCQNETTSRDMNLPVENASSVFTITSEDELDNINDLQRNIED 367
             LC++ G+ SDSFE  E  +N+ TS+D NLPVENA  V  I+SEDEL NI+ LQ+ IED
Sbjct: 313 GLLCDEGGIVSDSFEGVEARENQFTSKDANLPVENAPGVLMISSEDELSNIDTLQKEIED 372

Query: 368 PVIEPNASLTSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTCP 427
           P +E NASL  TS ELSCVICWTDFSS RGVLPCGHRFCYSCIQNWADHMAS+RK+STCP
Sbjct: 373 PAVEHNASL-PTSAELSCVICWTDFSSMRGVLPCGHRFCYSCIQNWADHMASSRKISTCP 432

Query: 428 LCKASFVSITKVEDAASSDQKIYSQTIPCGSSLSDIYILPDERILNSSVQPSVAAVCSAC 487
           LCKASF+SITKVE+AA+SDQKIYSQTIPCG SL DI+ILPDER LNS VQ SV  VCSAC
Sbjct: 433 LCKASFLSITKVEEAATSDQKIYSQTIPCGPSLLDIFILPDERTLNSGVQASVGGVCSAC 492

Query: 488 RCREPEDLLMSCHLCQFRHIHSYCLDPPLLPWTCIHCKDLQAIYHRRY 534
           RCREPEDLLMSCHLCQ RHIHSYCLDPPLLPWTCIHCKDLQ +YHR +
Sbjct: 493 RCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 538

[Close]

BLAST of Sed0013505 vs. ExPASy Swiss-Prot
Match: O04251 (BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana OX=3702 GN=At4g02110 PE=4 SV=3)

HSP 1 Score: 80.5 bits (197), Expect = 6.4e-14
Identity = 35/87 (40.23%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 19  IDGMESVVATVSGYHGTERFNLIKMISYTGASYVGAM-SRSITHLICWELEGRKFNLAKK 78
           I G +++V  ++GY G +R ++++M+   G  +   + +  +THLIC++ EG K+ LAK+
Sbjct: 106 IPGSKALVVCLTGYQGHDREDIMRMVELMGGQFSKPLVANRVTHLICYKFEGEKYELAKR 165

Query: 79  FKTI-IVNHRWLEDCIKQGRRVPEGPY 104
            K I +VNHRWLEDC+K  + +PE  Y
Sbjct: 166 IKRIKLVNHRWLEDCLKNWKLLPEVDY 192

[Close]

BLAST of Sed0013505 vs. ExPASy TrEMBL
Match: A0A6J1J2R6 (E3 ubiquitin-protein ligase rnf8-A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482151 PE=4 SV=1)

HSP 1 Score: 809.7 bits (2090), Expect = 7.4e-231
Identity = 409/527 (77.61%), Postives = 452/527 (85.77%), Query Frame = 0


Query: 10  CPNRHSGRPIDGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELEG 69
           CPNR +G PI+GMESVVATVSGYHGTERFNLIKMISYTGASYVG MSRSITHLICWELEG
Sbjct: 15  CPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSRSITHLICWELEG 74

Query: 70  RKFNLAKKFKTIIVNHRWLEDCIKQGRRVPEGPYILQSGQSAGPLSMKLPLAVEGSVSTK 129
           RKFNLAKKFKTIIVNHRWLEDCIKQG RVPE PYILQSGQSAGPLSMKLP + +GSVSTK
Sbjct: 75  RKFNLAKKFKTIIVNHRWLEDCIKQGMRVPEDPYILQSGQSAGPLSMKLPFSDKGSVSTK 134

Query: 130 KYDVLSENLDNCRNVEDQRIKNICSFGDSIVPHSCLLDKDLYSDFRKSNDTARKPKYKLQ 189
           KY V SE L NC NVEDQRIK +CSFGDSI+PHS LLDK++Y DFR S+DTA K K+KL+
Sbjct: 135 KYKVPSEKLHNCGNVEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNSDDTAHKQKHKLR 194

Query: 190 KGISKHDDPSSSSSRNHFQELGPSGFLAIERGSSSNLVRDARIGENSNQN-PVKSSRR-Q 249
           K ISK ++PSSSSS+NHF+E  PS F AI  GSSS+L RD   G+  N+N  V+SSRR +
Sbjct: 195 KRISKLEEPSSSSSKNHFKEPTPSDFFAIGCGSSSSLARDETKGKRYNENSTVRSSRRWR 254

Query: 250 RLVNKNSSEDHNELDVCNFVPESYQLGTRKHGNSVTVSSSLLDEETDIEVVNIGGTSDRA 309
           RLV KNSSEDHN+ DV NF PE Y L TR   NS+TV SS  D+ETD EVVN+GGT+DR 
Sbjct: 255 RLVKKNSSEDHNDPDVWNFDPEQYHLATR---NSLTVLSSHCDDETDTEVVNVGGTADRD 314

Query: 310 QLCEKRGLASDSFED-ETCQNETTSRDMNLPVENASSVFTITSEDELDNINDLQRNIEDP 369
           QLC++RGLASDSFE  E C+N++TSR  NL VENA  + T+TSEDEL    DLQ+ IEDP
Sbjct: 315 QLCDERGLASDSFEGVEACENQSTSRHTNLLVENAPRILTVTSEDELH--KDLQKIIEDP 374

Query: 370 VIEPNASLTSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTCPL 429
           VIE N S+ ST+TELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAS+RK+STCPL
Sbjct: 375 VIELNESIPSTTTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASSRKISTCPL 434

Query: 430 CKASFVSITKVEDAASSDQKIYSQTIPCGSSLSDIYILPDERILNSSVQPSVAAVCSACR 489
           CKASF+SITKVEDAA+SDQKIYSQTIPCG SL DIYILPDER L+S VQPSVAAVCS CR
Sbjct: 435 CKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTLDSVVQPSVAAVCSICR 494

Query: 490 CREPEDLLMSCHLCQFRHIHSYCLDPPLLPWTCIHCKDLQAIYHRRY 534
           C+EPEDLLMSCHLCQ RHIHSYCLDPPLLPW CIHCKDLQ +YHRR+
Sbjct: 495 CQEPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

[Close]

BLAST of Sed0013505 vs. ExPASy TrEMBL
Match: A0A0A0L7F3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271310 PE=4 SV=1)

HSP 1 Score: 807.7 bits (2085), Expect = 2.8e-230
Identity = 411/529 (77.69%), Postives = 457/529 (86.39%), Query Frame = 0


Query: 8   LSCPNRHSGRPIDGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWEL 67
           LSCPNR  G PI+GMESVV TVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWEL
Sbjct: 17  LSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWEL 76

Query: 68  EGRKFNLAKKFKTIIVNHRWLEDCIKQGRRVPEGPYILQSGQSAGPLSMKLPLAVEGSVS 127
           +GRKF+LA+KF+TIIVNHRWLEDCIK G+RVPEGPYILQSGQS GPLSMKLPLA +G VS
Sbjct: 77  QGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSIGPLSMKLPLADKGYVS 136

Query: 128 TKKYDVLSENLDNCRNVEDQRIKNICSFGDSIVPHSCLLDKDLYSDFRKSNDTARKPKYK 187
            KKY++LSE L N  NVEDQ IK+ICSFGDSI+P S LLDKDL SDFRKS+DTA K K+K
Sbjct: 137 AKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLSSDFRKSDDTAHKRKHK 196

Query: 188 LQKGISKHDDPSSSSSRNHFQELGPSGFLAIERGSSSNLVRDARIGENSNQ-NPVKSSRR 247
           ++K ISK +DPSSSSSRN F+E   +G  AIE GS S+L RD R GE+SNQ + VKSSRR
Sbjct: 197 VRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDERKGESSNQDSTVKSSRR 256

Query: 248 QR-LVNKNSSEDHNELDVCNFVPESYQLGTRKHGNSVTVSSSLLDEETDIEVVNIGGTSD 307
           +R LV+ NS EDHN+ D+ NF PE Y+LGTR   NS+TV S L D ETDIEVVNIGGTSD
Sbjct: 257 RRLLVSNNSREDHNKPDISNFDPELYRLGTR---NSLTVPSVLWDAETDIEVVNIGGTSD 316

Query: 308 RAQLCEKRGLASDSFED-ETCQNETTSRDMNLPVENASSVFTITSEDELDNINDLQRNIE 367
           R QLC++RGLAS  FE  E C+N++TS+D NL V+NA  V +ITSEDEL N+NDLQ+NIE
Sbjct: 317 REQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDELHNMNDLQKNIE 376

Query: 368 DPVIEPNASLTSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTC 427
           DPVIE +ASL STSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMA +RK+STC
Sbjct: 377 DPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMALSRKISTC 436

Query: 428 PLCKASFVSITKVEDAASSDQKIYSQTIPCGSSLSDIYILPDERILNSSVQPSVAAVCSA 487
           PLCKASF+SITKVE AA+SDQKIYSQTIPCGSSL DIY+L DER LN+ VQPSVAAVCSA
Sbjct: 437 PLCKASFLSITKVEYAATSDQKIYSQTIPCGSSLLDIYLLSDERTLNNVVQPSVAAVCSA 496

Query: 488 CRCREPEDLLMSCHLCQFRHIHSYCLDPPLLPWTCIHCKDLQAIYHRRY 534
           CRCREPEDLLMSCHLCQ R IHSYCLDPPLLPWTCIHCKDLQ +YHR +
Sbjct: 497 CRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 542

[Close]

BLAST of Sed0013505 vs. ExPASy TrEMBL
Match: A0A6J1FAW6 (uncharacterized protein LOC111442404 OS=Cucurbita moschata OX=3662 GN=LOC111442404 PE=4 SV=1)

HSP 1 Score: 804.3 bits (2076), Expect = 3.1e-229
Identity = 409/527 (77.61%), Postives = 447/527 (84.82%), Query Frame = 0


Query: 10  CPNRHSGRPIDGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELEG 69
           CPNR +G PI+GMESVVATVSGYHGTERFNLIKMISYTGASYVG MSRSITHLICWELEG
Sbjct: 15  CPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSRSITHLICWELEG 74

Query: 70  RKFNLAKKFKTIIVNHRWLEDCIKQGRRVPEGPYILQSGQSAGPLSMKLPLAVEGSVSTK 129
           RKFNLAKKFKTIIVNHRWLEDCIK G+RVPE PYILQSGQSAGPLSMKLP + +GSVSTK
Sbjct: 75  RKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMKLPFSDQGSVSTK 134

Query: 130 KYDVLSENLDNCRNVEDQRIKNICSFGDSIVPHSCLLDKDLYSDFRKSNDTARKPKYKLQ 189
           KY V SE L NC N+EDQRIK +CSFGDSI+PHS LLDK++Y DFR S+DTA K K+KL+
Sbjct: 135 KYTVPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNSDDTAHKQKHKLR 194

Query: 190 KGISKHDDPSSSSSRNHFQELGPSGFLAIERGSSSNLVRDARIGENSNQN-PVKSSRR-Q 249
           K ISK ++PSSSSS+NHF+E  PS F AI  GSSS+L RD   G+  N+N  V+SSRR +
Sbjct: 195 KRISKLEEPSSSSSKNHFKEPTPSDFFAIGCGSSSSLARDETKGKRYNENSTVRSSRRWR 254

Query: 250 RLVNKNSSEDHNELDVCNFVPESYQLGTRKHGNSVTVSSSLLDEETDIEVVNIGGTSDRA 309
           RLV KNSSEDHNE DV NF PE Y L  R   NS TV SS  D+ETDIE VNIGGT+D  
Sbjct: 255 RLVKKNSSEDHNEPDVWNFDPEQYHLVIR---NSPTVLSSHCDDETDIEAVNIGGTADCD 314

Query: 310 QLCEKRGLASDSFED-ETCQNETTSRDMNLPVENASSVFTITSEDELDNINDLQRNIEDP 369
           QLC++RGLASDSFE  E C N++TSR  NL VENA  + T TSEDEL   N LQ+NIED 
Sbjct: 315 QLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSEDELH--NGLQKNIEDS 374

Query: 370 VIEPNASLTSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTCPL 429
           VIE N S+ STSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAS RK+STCPL
Sbjct: 375 VIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASRRKISTCPL 434

Query: 430 CKASFVSITKVEDAASSDQKIYSQTIPCGSSLSDIYILPDERILNSSVQPSVAAVCSACR 489
           CKASF+SITKVEDAA+SDQKIYSQTIPCG+SL DIYILPDER L+S VQPSVAAVCS CR
Sbjct: 435 CKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSVVQPSVAAVCSVCR 494

Query: 490 CREPEDLLMSCHLCQFRHIHSYCLDPPLLPWTCIHCKDLQAIYHRRY 534
           CREPEDLLMSCHLCQ RHIHSYCLDPPLLPW CIHCKDLQ +YHRR+
Sbjct: 495 CREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

[Close]

BLAST of Sed0013505 vs. ExPASy TrEMBL
Match: A0A6J1D4V1 (uncharacterized protein LOC111016967 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016967 PE=4 SV=1)

HSP 1 Score: 803.1 bits (2073), Expect = 6.9e-229
Identity = 403/528 (76.33%), Postives = 452/528 (85.61%), Query Frame = 0


Query: 8   LSCPNRHSGRPIDGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWEL 67
           LSCPNRH G PI+GMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICW+L
Sbjct: 13  LSCPNRHYGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWKL 72

Query: 68  EGRKFNLAKKFKTIIVNHRWLEDCIKQGRRVPEGPYILQSGQSAGPLSMKLPLAVEGSVS 127
           EGRKF+LAKKFKTIIVNHRWLEDCI+QG+RVPEGPYILQSGQSAGPLS++LPLA + SVS
Sbjct: 73  EGRKFSLAKKFKTIIVNHRWLEDCIRQGKRVPEGPYILQSGQSAGPLSIELPLAAKDSVS 132

Query: 128 TKKYDVLSENLDNCRNVEDQRIKNICSFGDSIVPHSCLLDKDLYSDFRKSNDTARKPKYK 187
           T KY+VLSE   NC NVE+Q IK+I SFG +I P SCLLDKDL+SDF KS+DT+ K K+K
Sbjct: 133 TTKYNVLSEKSQNCGNVEEQSIKSIYSFG-AIWPRSCLLDKDLFSDFGKSDDTSHKSKHK 192

Query: 188 LQKGISKHDDPSSSSSRNHFQELGPSGFLAIERGSSSNLVRDARIGENSNQNP-VKSSRR 247
           L+K ISK +DPS+SSSRN+FQE  PS FL IERGSSS+L RD R GENSN +P VKSSRR
Sbjct: 193 LRKKISKQEDPSNSSSRNNFQEPTPSEFLEIERGSSSSLARDERKGENSNLSPTVKSSRR 252

Query: 248 QRLVNKNSSEDHNELDVCNFVPESYQLGTRKHGNSVTVSSSLLDEETDIEVVNIGGTSDR 307
           +RL+N+N+SEDH + DV +F PE Y LGTR HGN+ TV S  L+ E DIEVV IGG+SD 
Sbjct: 253 RRLLNRNTSEDHCKPDVWDFDPECYHLGTRNHGNNFTVLSCHLNNERDIEVVGIGGSSDH 312

Query: 308 AQLCEKRGLASDSFED-ETCQNETTSRDMNLPVENASSVFTITSEDELDNINDLQRNIED 367
             LC++ G+ SDSFE  E  +N+ TS+D NLPVENA  V  I+SEDEL NI+ LQ+ IED
Sbjct: 313 GLLCDEGGIVSDSFEGVEARENQFTSKDANLPVENAPGVLMISSEDELSNIDTLQKEIED 372

Query: 368 PVIEPNASLTSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTCP 427
           P +E NASL  TS ELSCVICWTDFSS RGVLPCGHRFCYSCIQNWADHMAS+RK+STCP
Sbjct: 373 PAVEHNASL-PTSAELSCVICWTDFSSMRGVLPCGHRFCYSCIQNWADHMASSRKISTCP 432

Query: 428 LCKASFVSITKVEDAASSDQKIYSQTIPCGSSLSDIYILPDERILNSSVQPSVAAVCSAC 487
           LCKASF+SITKVE+AA+SDQKIYSQTIPCG SL DI+ILPDER LNS VQ SV  VCSAC
Sbjct: 433 LCKASFLSITKVEEAATSDQKIYSQTIPCGPSLLDIFILPDERTLNSGVQASVGGVCSAC 492

Query: 488 RCREPEDLLMSCHLCQFRHIHSYCLDPPLLPWTCIHCKDLQAIYHRRY 534
           RCREPEDLLMSCHLCQ RHIHSYCLDPPLLPWTCIHCKDLQ +YHR +
Sbjct: 493 RCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 538

[Close]

BLAST of Sed0013505 vs. ExPASy TrEMBL
Match: A0A6J1D3H7 (uncharacterized protein LOC111016967 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016967 PE=4 SV=1)

HSP 1 Score: 778.9 bits (2010), Expect = 1.4e-221
Identity = 392/514 (76.26%), Postives = 440/514 (85.60%), Query Frame = 0


Query: 22  MESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELEGRKFNLAKKFKTI 81
           MESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICW+LEGRKF+LAKKFKTI
Sbjct: 1   MESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWKLEGRKFSLAKKFKTI 60

Query: 82  IVNHRWLEDCIKQGRRVPEGPYILQSGQSAGPLSMKLPLAVEGSVSTKKYDVLSENLDNC 141
           IVNHRWLEDCI+QG+RVPEGPYILQSGQSAGPLS++LPLA + SVST KY+VLSE   NC
Sbjct: 61  IVNHRWLEDCIRQGKRVPEGPYILQSGQSAGPLSIELPLAAKDSVSTTKYNVLSEKSQNC 120

Query: 142 RNVEDQRIKNICSFGDSIVPHSCLLDKDLYSDFRKSNDTARKPKYKLQKGISKHDDPSSS 201
            NVE+Q IK+I SFG +I P SCLLDKDL+SDF KS+DT+ K K+KL+K ISK +DPS+S
Sbjct: 121 GNVEEQSIKSIYSFG-AIWPRSCLLDKDLFSDFGKSDDTSHKSKHKLRKKISKQEDPSNS 180

Query: 202 SSRNHFQELGPSGFLAIERGSSSNLVRDARIGENSNQNP-VKSSRRQRLVNKNSSEDHNE 261
           SSRN+FQE  PS FL IERGSSS+L RD R GENSN +P VKSSRR+RL+N+N+SEDH +
Sbjct: 181 SSRNNFQEPTPSEFLEIERGSSSSLARDERKGENSNLSPTVKSSRRRRLLNRNTSEDHCK 240

Query: 262 LDVCNFVPESYQLGTRKHGNSVTVSSSLLDEETDIEVVNIGGTSDRAQLCEKRGLASDSF 321
            DV +F PE Y LGTR HGN+ TV S  L+ E DIEVV IGG+SD   LC++ G+ SDSF
Sbjct: 241 PDVWDFDPECYHLGTRNHGNNFTVLSCHLNNERDIEVVGIGGSSDHGLLCDEGGIVSDSF 300

Query: 322 ED-ETCQNETTSRDMNLPVENASSVFTITSEDELDNINDLQRNIEDPVIEPNASLTSTST 381
           E  E  +N+ TS+D NLPVENA  V  I+SEDEL NI+ LQ+ IEDP +E NASL  TS 
Sbjct: 301 EGVEARENQFTSKDANLPVENAPGVLMISSEDELSNIDTLQKEIEDPAVEHNASL-PTSA 360

Query: 382 ELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTCPLCKASFVSITKVED 441
           ELSCVICWTDFSS RGVLPCGHRFCYSCIQNWADHMAS+RK+STCPLCKASF+SITKVE+
Sbjct: 361 ELSCVICWTDFSSMRGVLPCGHRFCYSCIQNWADHMASSRKISTCPLCKASFLSITKVEE 420

Query: 442 AASSDQKIYSQTIPCGSSLSDIYILPDERILNSSVQPSVAAVCSACRCREPEDLLMSCHL 501
           AA+SDQKIYSQTIPCG SL DI+ILPDER LNS VQ SV  VCSACRCREPEDLLMSCHL
Sbjct: 421 AATSDQKIYSQTIPCGPSLLDIFILPDERTLNSGVQASVGGVCSACRCREPEDLLMSCHL 480

Query: 502 CQFRHIHSYCLDPPLLPWTCIHCKDLQAIYHRRY 534
           CQ RHIHSYCLDPPLLPWTCIHCKDLQ +YHR +
Sbjct: 481 CQIRHIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 512

[Close]

BLAST of Sed0013505 vs. TAIR 10
Match: AT1G67180.1 (zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein )

HSP 1 Score: 360.9 bits (925), Expect = 1.7e-99
Identity = 210/517 (40.62%), Postives = 297/517 (57.45%), Query Frame = 0


Query: 22  MESVVATVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELEGRKFNLAKKFKTI 81
           ME+VVATVSGYHG++RF LIK+IS++GASYVGAMSRSITHL+CW+ EG+K++LAKKF T+
Sbjct: 1   MENVVATVSGYHGSDRFKLIKLISHSGASYVGAMSRSITHLVCWKFEGKKYDLAKKFGTV 60

Query: 82  IVNHRWLEDCIKQGRRVPEGPYILQSGQSAGPLSMKLPLAVEGSVSTKKYDVLSENLDN- 141
           +VNHRW+E+C+K+GRRV E PY+  SG+  GPL ++LP   E +  TKK +  SE  D  
Sbjct: 61  VVNHRWVEECVKEGRRVSETPYMFDSGEEVGPLMIELPAVSEEAKVTKKVNKASETFDKY 120

Query: 142 CRNVEDQRIKNICSFGDSIVPHSCLLDKDLYSDFRKSNDTARKPKYKLQKGISKHDDPSS 201
             N  + R         S    +  ++K++ ++        ++P   L+   +K +   +
Sbjct: 121 FSNGGENR-------SGSTSELATWMEKNVEANRHSVRLRTKRPSSILE---NKENSGVA 180

Query: 202 SSSRNHFQELGPSGFLAIERGSSSNLVRDARIGENSNQNPVKSSRRQRLVNKNSSEDHNE 261
            SSR   + +       +++ S  NL+ D    E S+ N   +S      N+N ++DH E
Sbjct: 181 ESSRKGKKRV-------VKQRSYRNLI-DLESDEESDNNHHDNSDE----NQNETQDHRE 240

Query: 262 ---LDVCNFVPESYQLGTRKHGNSVTVSSSLLDEETDIEVVNIGGTSDRAQLCEKRGLAS 321
               +V  FV E  +    +H   +   +  +DE  + E  +      R +         
Sbjct: 241 PADENVRGFVFEQGETSALRHPGDLATPNWDVDEIEESENWSHSAVFKRPRSFSPEIKPQ 300

Query: 322 DSFEDETCQNETTSRDMNLPVENASSVFTITSEDELDNINDLQRNIEDPVIEPNASLTST 381
           D  +DE+ + ET + +                                            
Sbjct: 301 D--DDESTREETEATE------------------------------------------KA 360

Query: 382 STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTCPLCKASFVSITKV 441
             ++SC+ICWT+FSS+RG+LPCGHRFCYSCIQ WAD + S RK +TCPLCK++F++ITK+
Sbjct: 361 PAQVSCIICWTEFSSSRGILPCGHRFCYSCIQKWADRLVSERKKTTCPLCKSNFITITKI 420

Query: 442 EDAASSDQKIYSQTIPCGSSLSDI-YILPDERILNSSVQP-SVAAVCSACRCREPEDLLM 501
           EDA SSDQKIYSQT+P  SS ++I  +LP+E     ++ P + A+ CS C   EPE+LL+
Sbjct: 421 EDADSSDQKIYSQTVPDLSSTNNILVVLPEEEEQRQTLNPLTRASGCSRCYLTEPEELLI 451

Query: 502 SCHLCQFRHIHSYCLDPPLLPWTCIHCKDLQAIYHRR 533
            CHLC FR IHSYCLDP LLPWTC HC DLQ +YHRR
Sbjct: 481 RCHLCNFRRIHSYCLDPYLLPWTCNHCNDLQMMYHRR 451

[Close]

BLAST of Sed0013505 vs. TAIR 10
Match: AT4G02110.1 (transcription coactivators )

HSP 1 Score: 80.5 bits (197), Expect = 4.5e-15
Identity = 35/87 (40.23%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 19  IDGMESVVATVSGYHGTERFNLIKMISYTGASYVGAM-SRSITHLICWELEGRKFNLAKK 78
           I G +++V  ++GY G +R ++++M+   G  +   + +  +THLIC++ EG K+ LAK+
Sbjct: 106 IPGSKALVVCLTGYQGHDREDIMRMVELMGGQFSKPLVANRVTHLICYKFEGEKYELAKR 165

Query: 79  FKTI-IVNHRWLEDCIKQGRRVPEGPY 104
            K I +VNHRWLEDC+K  + +PE  Y
Sbjct: 166 IKRIKLVNHRWLEDCLKNWKLLPEVDY 192

[Close]

BLAST of Sed0013505 vs. TAIR 10
Match: AT1G77320.1 (transcription coactivators )

HSP 1 Score: 52.8 bits (125), Expect = 1.0e-06
Identity = 28/82 (34.15%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 18  PIDGMESVVATVSGYHGTERFNLIKMISYT-GASYVGAMSRSITHLICWELEGRKFNLAK 77
           P+ G ES +   S  H  +   L++ +S   GA +V  ++R +THLIC   +G K+  A 
Sbjct: 660 PLPGFES-LCICSSQHNEKNVELLRNLSVVLGADFVERLTRKVTHLICNFAKGDKYVRAS 719

Query: 78  KFKTIIVNHRWLEDCIKQGRRV 99
           K+  I V   WL +C++Q + V
Sbjct: 720 KWGIISVTPDWLYECVRQNQVV 740

[Close]

BLAST of Sed0013505 vs. TAIR 10
Match: AT1G77320.2 (transcription coactivators )

HSP 1 Score: 52.8 bits (125), Expect = 1.0e-06
Identity = 28/82 (34.15%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 18  PIDGMESVVATVSGYHGTERFNLIKMISYT-GASYVGAMSRSITHLICWELEGRKFNLAK 77
           P+ G ES +   S  H  +   L++ +S   GA +V  ++R +THLIC   +G K+  A 
Sbjct: 643 PLPGFES-LCICSSQHNEKNVELLRNLSVVLGADFVERLTRKVTHLICNFAKGDKYVRAS 702

Query: 78  KFKTIIVNHRWLEDCIKQGRRV 99
           K+  I V   WL +C++Q + V
Sbjct: 703 KWGIISVTPDWLYECVRQNQVV 723

[Close]

BLAST of Sed0013505 vs. TAIR 10
Match: AT5G24870.1 (RING/U-box superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 3.6e-04
Identity = 33/113 (29.20%), Postives = 50/113 (44.25%), Query Frame = 0


Query: 332 RDMNLPVENAS------------SVFTITSEDELDNINDLQRNIEDPVIEPNASLTSTST 391
           RDM L ++N S            +V T  SE+ L  +  L+ +I  P  E +    +   
Sbjct: 407 RDMRLDIDNMSYEELLALEEKMGTVSTALSEEAL--LKSLKSSIYRPNDESDDICLNKDD 466

Query: 392 ELSCVICWTDF--SSTRGVLPCGHRFCYSCIQNWADHMASNRKVSTCPLCKAS 431
           ++ C IC  ++      G LPC H++  SC Q W       R  + CP+CK S
Sbjct: 467 DVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWL------RMKNWCPICKTS 511

The following BLAST results are available for this feature:

BLAST of Sed0013505 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887153.1	4.0e-231	78.26	uncharacterized protein LOC120077302 [Benincasa hispida]	[more]
XP_022983591.1	1.5e-230	77.61	E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima] >XP_022983592.1...	[more]
XP_011651366.1	5.8e-230	77.69	uncharacterized protein LOC101213123 [Cucumis sativus] >XP_011651367.1 uncharact...	[more]
XP_022935568.1	6.4e-229	77.61	uncharacterized protein LOC111442404 [Cucurbita moschata] >XP_022935569.1 unchar...	[more]
XP_022148261.1	1.4e-228	76.33	uncharacterized protein LOC111016967 isoform X1 [Momordica charantia] >XP_022148...	[more]

BLAST of Sed0013505 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04251	6.4e-14	40.23	BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana OX=3702 GN=At4g...	[more]

BLAST of Sed0013505 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J2R6	7.4e-231	77.61	E3 ubiquitin-protein ligase rnf8-A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0L7F3	2.8e-230	77.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271310 PE=4 SV=1	[more]
A0A6J1FAW6	3.1e-229	77.61	uncharacterized protein LOC111442404 OS=Cucurbita moschata OX=3662 GN=LOC1114424...	[more]
A0A6J1D4V1	6.9e-229	76.33	uncharacterized protein LOC111016967 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1D3H7	1.4e-221	76.26	uncharacterized protein LOC111016967 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Sed0013505 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67180.1	1.7e-99	40.62	zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing pro...	[more]
AT4G02110.1	4.5e-15	40.23	transcription coactivators	[more]
AT1G77320.1	1.0e-06	34.15	transcription coactivators	[more]
AT1G77320.2	1.0e-06	34.15	transcription coactivators	[more]
AT5G24870.1	3.6e-04	29.20	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 371..415 e-value: 7.3E-8 score: 42.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 370..416 e-value: 4.4E-10 score: 39.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 371..416 score: 13.374458
IPR001357	BRCT domain	SMART	SM00292	BRCT_7	coord: 4..83 e-value: 1.1E-12 score: 58.2
IPR001357	BRCT domain	PFAM	PF12738	PTCB-BRCT	coord: 13..75 e-value: 4.6E-18 score: 64.9
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 2..93 score: 17.095301
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 327..441 e-value: 4.8E-15 score: 57.2
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 7..98 e-value: 7.8E-25 score: 89.1
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 6..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..190
None	No IPR available	PANTHER	PTHR47776	F5A8.9 PROTEIN	coord: 6..519
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 370..424
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 387..396
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 467..513

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013505.1	Sed0013505.1	mRNA
Sed0013505.2	Sed0013505.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0046872	metal ion binding