Sed0013488 (gene) Chayote v1

Overview


Name	Sed0013488
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pectin lyase-like superfamily protein
Location	LG06: 4679926 .. 4684416 (+)
RNA-Seq Expression	Sed0013488
Synteny	Sed0013488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCTCTTTATCAATCTTTTTCTGCCTTTATTTGATATGGAGATGGGTGGAAAGAATTTAAAATGTCTTGCAACTATTGCTTTCATTTGTGTTTTTGTTTGGTCATTTAGTTTGGAAAATTGTCATGCTAGAGAGGGCAGGCAATGGGGGGCACATAGAAAAACCGGAGGCTACCGACACGGCCGCGTTCATCGCGGTTCGTTGAGGCTGACGGGCGGTGGTGATGTTGTGGGAGCCTCACTGGCAAGTCAAGGTGGTGCTAGTAAGGGTGGTCCTGGTAGTTTTAATGTGTTGGACTTTGGAGCTAAAGGCGATGGAGAGACAGATGACACTAAGGTGAATTTAGGCTTTGCTTATTATTTTCATTACATAGAAATAGCACAATCATTTATACTTGACAGAATTGAAAGCTAACAAAAATGCTTGACAATGTATGCATACCAGGCATTTCAAGCAGCTTGGGAATCAGCTTGTAATGCAGAGGGATCAACTGTGGAGGTTCCCTCAGGTTCCGAGTTCCTCGTCGGCCCCATTTCATTCTCCGGTCCTAATTGTCAACCAAACATTGTGTTTCAGGTCAATACCTTCTTTTTATTTTTCGATTTAACAATATTTGAGAAAGAGAATTTGTACCTGTAACCTCATATTTACTAGACAGTACATGATACACCACTTAAGCTATGCAGCTTTTGGCGTGTTTGATGTCAAAATCAAAACACAGAATCCTGTTTAGAAGTTAAAAAATTCTTTTAAGTTCACAGTAACTAATGTTTTAAAAGAAGTCTGATCAGTTTTATGTATATTTCTTGATGACATTTTTTAAAAAAACTACATCTCCTATTTGACATGCAGTTGGATGGCAAAATCATTGCTCCTACAAGCTCTAGTGCTTGGGGTTCAGGTCTCTTGCAATGGATTGAATTCACTAAACTTAAAGGGATTACAGTTAAAGGTACAGGTACTATTGATGGACAAGGTTCCGTTTGGTGGAACCACTCACCCACAGACAACCCTACCGACGAAAATTTGGTAATTTCGTAAATCAACTGAGATTCTGCCGAAAGTTAGAATTTAGTCCTATGGTTTTAAAAACTAGAATTTAGTCTCTTTGGTGAAATAGTCATTCTTGTCCATAATTCATGACGAATTAAGTATGTGGAGGGGTAACTGTTCATGTATAAATGATGTGGTTTAAAAAAAAATCAAATCAGTCATTTAACTCACACCGTCATTATTGACACATGAATAACTAACTTTCACAATTTACTTTGTCAAAATGATTATGAATGATAATGACTATTTTTTTAAATTTTATCAAACCATCTAAATTCTATTTTCTAAAACCATAGAGATTAAATTCTAACTTTCTTGAAGTAATCACGACAAAACGTATAATTTACCCAAAAATAAACTTCACATTCCAATTCAAACAGTTACCTAATCACAACTTTAATCTCATGCAACAGGACAAGGAAAGCAGTAATGGAAGACTTCCAAGCACCAAACCAACAGTACAGGCTTGGCTTAAACTTGACAATAGCAGAACATATGGATCAAAAAGAGTTTTCTGTTTCTGATTCTGATATTTTTTGTGCAGGCACTTAGGTTCTATGGAAGTGATGGAGTGACAGTTAGTGGAATAACAATTCAAAACAGCCAACAAGCTCACCTGAAATTTGATAGTTGCACATCAGTTCAGGTTTCTTCATTAACCATTTCATCCCCGGGCGACAGCCCGAACACAGATGGAATTCACTTGCAGAACTCTCAGAATGTGATCATTTCAAACAGCAATCTAGCTTGTGGTAATTCCCAATTCTGAGTATTAACTGCAAAGATGGATTTGTTTAGTATGAGAATTTAGCTTTAAAAAGTAATATTCCAACTTTACATAAGCAGATAAATTAAATAGAAGGTAATCCAATTGGTTAAAAGTCAGTAAGGTGGACTTCCAGCAGCAAGTCATTTAAAGGTGGTTTTGGATTTGTTTTTTGCATAACAGTTATGAGAACTTTGTTTTATTTAATCTGTTTGTAGAAGTAGAATAAGGTTCTAAGCATGATGTTGGTTGGGGAAAGTAGAATGAGTATGACTACAAGGAGAATAGTTCACTAACCCACATTTGAGCCACCGACAACCATTCTCCCCACGATCAATATTCATTCCTACACAATCACTATTCATTTCTCCCCCATAACCACTTTTTATTCATCCATAATTTCTTTTTCCCTATAGTCAATATTCATTCATCCATAATCACTATTTATTCCCCCCTAACCATATTTCGTTCTCCCCGTAACCACTTTTCATTCTCTCCATAATAATTTTTTCATTCTCGCAATAACCAGTTCCCATTCACCTCATACTCTCTATTTCTTCCTCTATAATCATTCTTTACACTCCAAATACAGGTAATGGTTCTCTCCAGAATCATTTCATGCACCCTAAACATGGGTATCGATTTCCTCCATAATCATTCTCTTCACCCTAAACATAGATTATCATTCTCTCCCATAGTCTCATTCTCCATAATTATTCTTATTCTCTTGCCCCAAACGCTCCCTTGATTTTCTCAATCCCCAACCTCTACTTTGAGCAATACTTAAGTAAGGGTGGATAAGTATTTTGAGAGCCACATATTTTAACTTTTTTAAAAAAAAATTGGCTTTGATTAATAGAAAGAGAAGTACAAAAAAGTAAAATTTTGTGATTTTAAGGATGGGTAAATATTTCCAAAATACTTACCCACCCTTACCTAAGTATTGCTCCCTGTACTTTTGATGGAAGATCGAATTCAGTTGCCTTGAAAAAAGCAAGACCATGAAAACAGATTTTTAAACATCTAATTGAAAATGTATCCACTAAAAACAAAGAAGATCCTTTAAATTCAACTGTCAGGTAGAACCTTATTCCCTAAAAAACTTAAACAGGTCTGACCACAAATTTCACTCTTGTGACAAAGGAAAAAATTCTTGCAGCTATTGAATATAAATAATTAGTAGCATTATGAAACATATCTAAATAAAAATCAAACTACAGGTGATGATTGTATATCCATACAAACTGGAAGCTCATCCATATACATACACGACGTCAACTGTGGACCGGGCCACGGAATTAGCATCGGAGGACTAGGCCGAGATCAAACAAAAGCATGTGTTTCCAATGTCACAGTCCGTGATGTTAAACTGCATAACACAATGAATGGGGTCAGAATAAAAACATGGCAGGTATAAAACCTTTCTTTTTTTCTTTTTTCTTTTTGAGTACATATTGGGGAAGGGGGGACAAATACCGATTCTCGGGATCGAACCTGTAACGCAAGTGTTGAACTGATTTACAACCAAATAATGAAACTATTGCACCACTAACTCACTGGTATAAAACCTTTCTCTTCTAGTTTTGACTCCAACATAGTAATAAATGTATTTTAGTAAAAGTAGAAAAAAAGAAAAAGAAAACACATCAATGAATCCCGTTTTTATTTAGGCATACTTTTTTGCTTATGAATTGTTTGCCAAAACCCCTATTTTTCAAACCAACCTAAATTATAAAAGTTAGAATTTAGTCTCTATAGTCTAGATAAAGTTTGTATTTAGTCCTTATAATTTTAAAAATTAGAATTTAGTCCCCATGGTTTGATAAAATATAAGAAATAGTACACGTCGTTGGTAATCGCTAGCGAATGAAGTACGTGCAAGTAACTATCCATGCGTAAATGATATATTTGTCCAATCCATCACTTAACTTACACCATCATCACTGACACATGAACAACCAACTTCCACGTATTGAATTTGCCAACGATTACAAGCGAAAGTGGCTATTTTTTAAGTTTTATCAAACCGTAGGAACTAAGAGTCTAACATTCTCCAAAACATAGGAACTAAATTCCAACTTTCTCCCCATTTCAGGGAGGTTCAGGCCAAGTACAGGGAATACTATTCTCAAACATTCAAGTTTCAGAGGTTCAAACTCCAATAATGATAGACCAATACTACTGCGATGGAGGTAGATGCCATAATGGATCTTCAGCAGTGGCAATTTCAGGAGTAAACTATGTAAACATTAGAGGTACATACACCTCGACGCCGGTCCATTTCGCCTGCAGCGACAGCCTTCCGTGCACTGGTGTGACATTAGACACCATTCAGCTTACAGGGAGTAGCACCTCAAACCAACCATTCTGTTGGAAAACATTTGGTGAACTGAAAACCTCCACTGTCCCTCCCCTCGACTGCTTGCAGTCCGGCAATCCATCGAAACCTCAGGCTCGCGATACTTGCTAAGCACACATGCTACATATTAAGTAGTTTATAGATAGATATGTGCTGTCATTAATGGAAAATTAGGATGAAGTTTACATGGTAGATATATGCTATTAAATGGGGTGCTATATATATTGATGTATGCAGTCACTTGTATGGAGAGTTGGGAAAAAATGTGCATGGTAGACTGCTTAGAATTAGAAGTGTTTGCTTAAAGAGAGA

mRNA sequence

TTCTCTCTTTATCAATCTTTTTCTGCCTTTATTTGATATGGAGATGGGTGGAAAGAATTTAAAATGTCTTGCAACTATTGCTTTCATTTGTGTTTTTGTTTGGTCATTTAGTTTGGAAAATTGTCATGCTAGAGAGGGCAGGCAATGGGGGGCACATAGAAAAACCGGAGGCTACCGACACGGCCGCGTTCATCGCGGTTCGTTGAGGCTGACGGGCGGTGGTGATGTTGTGGGAGCCTCACTGGCAAGTCAAGGTGGTGCTAGTAAGGGTGGTCCTGGTAGTTTTAATGTGTTGGACTTTGGAGCTAAAGGCGATGGAGAGACAGATGACACTAAGGCATTTCAAGCAGCTTGGGAATCAGCTTGTAATGCAGAGGGATCAACTGTGGAGGTTCCCTCAGGTTCCGAGTTCCTCGTCGGCCCCATTTCATTCTCCGGTCCTAATTGTCAACCAAACATTGTGTTTCAGTTGGATGGCAAAATCATTGCTCCTACAAGCTCTAGTGCTTGGGGTTCAGGTCTCTTGCAATGGATTGAATTCACTAAACTTAAAGGGATTACAGTTAAAGGTACAGGTACTATTGATGGACAAGGTTCCGTTTGGTGGAACCACTCACCCACAGACAACCCTACCGACGAAAATTTGGACAAGGAAAGCAGTAATGGAAGACTTCCAAGCACCAAACCAACAGCACTTAGGTTCTATGGAAGTGATGGAGTGACAGTTAGTGGAATAACAATTCAAAACAGCCAACAAGCTCACCTGAAATTTGATAGTTGCACATCAGTTCAGGTTTCTTCATTAACCATTTCATCCCCGGGCGACAGCCCGAACACAGATGGAATTCACTTGCAGAACTCTCAGAATGTGATCATTTCAAACAGCAATCTAGCTTGTGGTGATGATTGTATATCCATACAAACTGGAAGCTCATCCATATACATACACGACGTCAACTGTGGACCGGGCCACGGAATTAGCATCGGAGGACTAGGCCGAGATCAAACAAAAGCATGTGTTTCCAATGTCACAGTCCGTGATGTTAAACTGCATAACACAATGAATGGGGTCAGAATAAAAACATGGCAGGGAGGTTCAGGCCAAGTACAGGGAATACTATTCTCAAACATTCAAGTTTCAGAGGTTCAAACTCCAATAATGATAGACCAATACTACTGCGATGGAGGTAGATGCCATAATGGATCTTCAGCAGTGGCAATTTCAGGAGTAAACTATGTAAACATTAGAGGTACATACACCTCGACGCCGGTCCATTTCGCCTGCAGCGACAGCCTTCCGTGCACTGGTGTGACATTAGACACCATTCAGCTTACAGGGAGTAGCACCTCAAACCAACCATTCTGTTGGAAAACATTTGGTGAACTGAAAACCTCCACTGTCCCTCCCCTCGACTGCTTGCAGTCCGGCAATCCATCGAAACCTCAGGCTCGCGATACTTGCTAAGCACACATGCTACATATTAAGTAGTTTATAGATAGATATGTGCTGTCATTAATGGAAAATTAGGATGAAGTTTACATGGTAGATATATGCTATTAAATGGGGTGCTATATATATTGATGTATGCAGTCACTTGTATGGAGAGTTGGGAAAAAATGTGCATGGTAGACTGCTTAGAATTAGAAGTGTTTGCTTAAAGAGAGA

Coding sequence (CDS)

ATGGAGATGGGTGGAAAGAATTTAAAATGTCTTGCAACTATTGCTTTCATTTGTGTTTTTGTTTGGTCATTTAGTTTGGAAAATTGTCATGCTAGAGAGGGCAGGCAATGGGGGGCACATAGAAAAACCGGAGGCTACCGACACGGCCGCGTTCATCGCGGTTCGTTGAGGCTGACGGGCGGTGGTGATGTTGTGGGAGCCTCACTGGCAAGTCAAGGTGGTGCTAGTAAGGGTGGTCCTGGTAGTTTTAATGTGTTGGACTTTGGAGCTAAAGGCGATGGAGAGACAGATGACACTAAGGCATTTCAAGCAGCTTGGGAATCAGCTTGTAATGCAGAGGGATCAACTGTGGAGGTTCCCTCAGGTTCCGAGTTCCTCGTCGGCCCCATTTCATTCTCCGGTCCTAATTGTCAACCAAACATTGTGTTTCAGTTGGATGGCAAAATCATTGCTCCTACAAGCTCTAGTGCTTGGGGTTCAGGTCTCTTGCAATGGATTGAATTCACTAAACTTAAAGGGATTACAGTTAAAGGTACAGGTACTATTGATGGACAAGGTTCCGTTTGGTGGAACCACTCACCCACAGACAACCCTACCGACGAAAATTTGGACAAGGAAAGCAGTAATGGAAGACTTCCAAGCACCAAACCAACAGCACTTAGGTTCTATGGAAGTGATGGAGTGACAGTTAGTGGAATAACAATTCAAAACAGCCAACAAGCTCACCTGAAATTTGATAGTTGCACATCAGTTCAGGTTTCTTCATTAACCATTTCATCCCCGGGCGACAGCCCGAACACAGATGGAATTCACTTGCAGAACTCTCAGAATGTGATCATTTCAAACAGCAATCTAGCTTGTGGTGATGATTGTATATCCATACAAACTGGAAGCTCATCCATATACATACACGACGTCAACTGTGGACCGGGCCACGGAATTAGCATCGGAGGACTAGGCCGAGATCAAACAAAAGCATGTGTTTCCAATGTCACAGTCCGTGATGTTAAACTGCATAACACAATGAATGGGGTCAGAATAAAAACATGGCAGGGAGGTTCAGGCCAAGTACAGGGAATACTATTCTCAAACATTCAAGTTTCAGAGGTTCAAACTCCAATAATGATAGACCAATACTACTGCGATGGAGGTAGATGCCATAATGGATCTTCAGCAGTGGCAATTTCAGGAGTAAACTATGTAAACATTAGAGGTACATACACCTCGACGCCGGTCCATTTCGCCTGCAGCGACAGCCTTCCGTGCACTGGTGTGACATTAGACACCATTCAGCTTACAGGGAGTAGCACCTCAAACCAACCATTCTGTTGGAAAACATTTGGTGAACTGAAAACCTCCACTGTCCCTCCCCTCGACTGCTTGCAGTCCGGCAATCCATCGAAACCTCAGGCTCGCGATACTTGCTAA

Protein sequence

MEMGGKNLKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTGGYRHGRVHRGSLRLTGGGDVVGASLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESACNAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFTKLKGITVKGTGTIDGQGSVWWNHSPTDNPTDENLDKESSNGRLPSTKPTALRFYGSDGVTVSGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSSSIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQGILFSNIQVSEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVHFACSDSLPCTGVTLDTIQLTGSSTSNQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQARDTC

Homology

[Close]

BLAST of Sed0013488 vs. NCBI nr
Match: XP_022935210.1 (polygalacturonase At1g48100-like [Cucurbita moschata])

HSP 1 Score: 868.6 bits (2243), Expect = 2.5e-248
Identity = 430/485 (88.66%), Postives = 449/485 (92.58%), Query Frame = 0


Query: 1   MEMGGKNLKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTGGYRHGRVHR-----GS 60
           MEMGGKNLKCLATIAFIC FVWSFSL+NC AREG+ W AHRKTGGYRHGR+HR     GS
Sbjct: 1   MEMGGKNLKCLATIAFICAFVWSFSLQNCQAREGKHW-AHRKTGGYRHGRIHRDRGGSGS 60

Query: 61  LRLTGGG-----DVVGASLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESAC 120
            RLTG G     DVVGASLAS+G ASKGG G+FNVLDFGAKGDG  DDTKAFQAAWESAC
Sbjct: 61  SRLTGSGHVGSEDVVGASLASKGDASKGGSGNFNVLDFGAKGDGRADDTKAFQAAWESAC 120

Query: 121 NAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFTK 180
           +AE STVEVPSGSEFLVGPISFSGPNC+PNIVFQLDGKIIAPTS SAWGSGLLQWIEFTK
Sbjct: 121 SAEKSTVEVPSGSEFLVGPISFSGPNCKPNIVFQLDGKIIAPTSPSAWGSGLLQWIEFTK 180

Query: 181 LKGITVKGTGTIDGQGSVWWNHSPTDNPTDENLDKESSNGRLPSTKPTALRFYGSDGVTV 240
           LKGITVKGTGTIDGQGSVWWN SPT +PTDENLDKESS+G+LPSTKPTALRFYGSDGVTV
Sbjct: 181 LKGITVKGTGTIDGQGSVWWNDSPTYDPTDENLDKESSSGKLPSTKPTALRFYGSDGVTV 240

Query: 241 SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD 300
           SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD
Sbjct: 241 SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD 300

Query: 301 CISIQTGSSSIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTW 360
           CISIQTGSS++YIH+VNCGPGHGISIGGLGRDQTKACVSNVTVRDVKL NTMNGVRIKTW
Sbjct: 301 CISIQTGSSAVYIHNVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLQNTMNGVRIKTW 360

Query: 361 QGGSGQVQGILFSNIQVSEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTST 420
           QGGSG VQGILFSNIQVS+V+TPIMIDQYYCDGG CHNGSSAVAISGVNYVNIRGTYTST
Sbjct: 361 QGGSGLVQGILFSNIQVSDVKTPIMIDQYYCDGGSCHNGSSAVAISGVNYVNIRGTYTST 420

Query: 421 PVHFACSDSLPCTGVTLDTIQLTGSSTSNQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQ 476
           PVH ACSDSLPCTGVTLDTIQL GS  SN+PFCWK +GELKTSTVP +DCLQSGNP K Q
Sbjct: 421 PVHLACSDSLPCTGVTLDTIQLEGSGHSNEPFCWKAYGELKTSTVPAIDCLQSGNPGKAQ 480

[Close]

BLAST of Sed0013488 vs. NCBI nr
Match: XP_023527919.1 (polygalacturonase At1g48100-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 856.7 bits (2212), Expect = 9.7e-245
Identity = 425/485 (87.63%), Postives = 443/485 (91.34%), Query Frame = 0


Query: 1   MEMGGKNLKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTGGYRHGRVHR---GSLR 60
           MEMGGKNLKCLATIAFIC FVWSFSL+NC AR G+ W AHRKTGGYRHG +HR   GS  
Sbjct: 1   MEMGGKNLKCLATIAFICAFVWSFSLQNCQARGGKHW-AHRKTGGYRHGHIHRHRGGSSS 60

Query: 61  L-------TGGGDVVGASLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESAC 120
                    G  DVVGASLAS+G ASKGG G+FNVLDFGAKGDG  DDTKAFQAAWESAC
Sbjct: 61  SGLMDSGHVGSEDVVGASLASKGDASKGGSGNFNVLDFGAKGDGRADDTKAFQAAWESAC 120

Query: 121 NAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFTK 180
           NAE STVEVPSGSEFLVGPISFSGPNC+PNIVFQLDGKIIAPTS SAWGSGLLQWIEFTK
Sbjct: 121 NAEKSTVEVPSGSEFLVGPISFSGPNCKPNIVFQLDGKIIAPTSPSAWGSGLLQWIEFTK 180

Query: 181 LKGITVKGTGTIDGQGSVWWNHSPTDNPTDENLDKESSNGRLPSTKPTALRFYGSDGVTV 240
           LKGITVKGTGTIDGQGSVWWN SPT +PTDENLDKESS+G+LPSTKPTALRFYGSDGVTV
Sbjct: 181 LKGITVKGTGTIDGQGSVWWNDSPTYDPTDENLDKESSSGKLPSTKPTALRFYGSDGVTV 240

Query: 241 SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD 300
           SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD
Sbjct: 241 SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD 300

Query: 301 CISIQTGSSSIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTW 360
           CISIQTGSS++YIH+VNCGPGHGISIGGLGRDQTKACVSNVTVRDVKL NTMNGVRIKTW
Sbjct: 301 CISIQTGSSAVYIHNVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLQNTMNGVRIKTW 360

Query: 361 QGGSGQVQGILFSNIQVSEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTST 420
           QGGSG VQGILFSNIQVS+V+TPIMIDQYYCDGG CHNGSSAVAISGVNYVNIRGTYTST
Sbjct: 361 QGGSGLVQGILFSNIQVSDVKTPIMIDQYYCDGGSCHNGSSAVAISGVNYVNIRGTYTST 420

Query: 421 PVHFACSDSLPCTGVTLDTIQLTGSSTSNQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQ 476
           PVH ACSDSLPCTGVTLDTIQL GS  SN+PFCWK +GELKTSTVP +DCLQSGNP K Q
Sbjct: 421 PVHLACSDSLPCTGVTLDTIQLEGSGRSNEPFCWKAYGELKTSTVPAIDCLQSGNPGKAQ 480

[Close]

BLAST of Sed0013488 vs. NCBI nr
Match: XP_022983321.1 (polygalacturonase At1g48100-like [Cucurbita maxima])

HSP 1 Score: 855.1 bits (2208), Expect = 2.8e-244
Identity = 424/485 (87.42%), Postives = 445/485 (91.75%), Query Frame = 0


Query: 1   MEMGGKNLKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTGGYRHGRVHR-----GS 60
           MEMGGKNLKCLATIAFIC FVWSFSL+NC AR G+ W AHRKTGGYRHGR+HR      S
Sbjct: 1   MEMGGKNLKCLATIAFICAFVWSFSLQNCQARGGKHW-AHRKTGGYRHGRIHRHRGGSSS 60

Query: 61  LRLTGGG-----DVVGASLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESAC 120
           L LT  G     DVVGASLAS+G ASKGG G+FNVLDFGAKGDG  DDTKAFQAAWESAC
Sbjct: 61  LGLTDSGHVGSEDVVGASLASKGDASKGGSGNFNVLDFGAKGDGRADDTKAFQAAWESAC 120

Query: 121 NAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFTK 180
           NAE STVEVPSGSEFLVGPISFSGPNC+PNIVFQLDGKIIAPTS SAWGSGLLQWIEFTK
Sbjct: 121 NAEKSTVEVPSGSEFLVGPISFSGPNCKPNIVFQLDGKIIAPTSPSAWGSGLLQWIEFTK 180

Query: 181 LKGITVKGTGTIDGQGSVWWNHSPTDNPTDENLDKESSNGRLPSTKPTALRFYGSDGVTV 240
           LKGITVKGTGTIDGQGSVWWN SPT +PTDENLDKESS+ +LPSTKPTALRFYGSDGVTV
Sbjct: 181 LKGITVKGTGTIDGQGSVWWNDSPTYDPTDENLDKESSSRKLPSTKPTALRFYGSDGVTV 240

Query: 241 SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD 300
           SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD
Sbjct: 241 SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD 300

Query: 301 CISIQTGSSSIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTW 360
           CISIQTGSS++YIH+VNCGPGHGISIGGLGRDQTKACVSNVTVRDVKL NTMNGVRIKTW
Sbjct: 301 CISIQTGSSAVYIHNVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLQNTMNGVRIKTW 360

Query: 361 QGGSGQVQGILFSNIQVSEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTST 420
           QGGSG VQGILFSNIQVS+V+TPIMIDQYYCDGG CHNGSSAVAISGVNYVNIRGTYTST
Sbjct: 361 QGGSGLVQGILFSNIQVSDVKTPIMIDQYYCDGGSCHNGSSAVAISGVNYVNIRGTYTST 420

Query: 421 PVHFACSDSLPCTGVTLDTIQLTGSSTSNQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQ 476
           PVH ACSDSLPCTGVTLDTIQL GS  SN+PFCWK +GELKTSTVP ++CLQSGNP K Q
Sbjct: 421 PVHLACSDSLPCTGVTLDTIQLEGSGRSNEPFCWKAYGELKTSTVPAIECLQSGNPGKAQ 480

[Close]

BLAST of Sed0013488 vs. NCBI nr
Match: XP_038905486.1 (polygalacturonase At1g48100 [Benincasa hispida])

HSP 1 Score: 853.2 bits (2203), Expect = 1.1e-243
Identity = 420/485 (86.60%), Postives = 444/485 (91.55%), Query Frame = 0


Query: 1   MEMGGKNLKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTGGYRHGRVHR-----GS 60
           MEMGGKNLKCLA IAFICVFVWSFSL+N HAREG+ W AHR+TGGYRH  VHR     GS
Sbjct: 1   MEMGGKNLKCLAIIAFICVFVWSFSLQNSHAREGKHW-AHRQTGGYRHRHVHRHRGSSGS 60

Query: 61  LRLTGGG-----DVVGASLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESAC 120
            RL G G     DVVG SLAS+G  SK G G+FNVLDFGAKGDG+ DDTKAFQ+AW+SAC
Sbjct: 61  SRLKGNGHVGSEDVVGTSLASEGSDSKSGSGNFNVLDFGAKGDGKADDTKAFQSAWQSAC 120

Query: 121 NAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFTK 180
           NAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTS S WGS LLQWIEFTK
Sbjct: 121 NAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSPSVWGSSLLQWIEFTK 180

Query: 181 LKGITVKGTGTIDGQGSVWWNHSPTDNPTDENLDKESSNGRLPSTKPTALRFYGSDGVTV 240
           LKGITVKGTGTIDGQGSVWWN SPT +PTDENLDKESS+G+LPSTKPTALRFYGSDGV V
Sbjct: 181 LKGITVKGTGTIDGQGSVWWNDSPTYDPTDENLDKESSSGKLPSTKPTALRFYGSDGVIV 240

Query: 241 SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD 300
           SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIIS+SNLACGDD
Sbjct: 241 SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISHSNLACGDD 300

Query: 301 CISIQTGSSSIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTW 360
           CISIQTGSSS+YIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKL NTM GVRIKTW
Sbjct: 301 CISIQTGSSSVYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLQNTMTGVRIKTW 360

Query: 361 QGGSGQVQGILFSNIQVSEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTST 420
           QGGSG VQGILFSN+QVS+V+TPI+IDQYYCDGGRCHNGSSAVAISGV+YVNI+GTYTST
Sbjct: 361 QGGSGSVQGILFSNVQVSDVRTPIIIDQYYCDGGRCHNGSSAVAISGVSYVNIKGTYTST 420

Query: 421 PVHFACSDSLPCTGVTLDTIQLTGSSTSNQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQ 476
           PVHFACSDSLPCTGVTLDTIQL GS  SN+PFCWK +GELKTST+PP+DCLQSGNP K Q
Sbjct: 421 PVHFACSDSLPCTGVTLDTIQLEGSGRSNEPFCWKAYGELKTSTIPPVDCLQSGNPMKAQ 480

[Close]

BLAST of Sed0013488 vs. NCBI nr
Match: XP_022928201.1 (polygalacturonase At1g48100 [Cucurbita moschata])

HSP 1 Score: 852.8 bits (2202), Expect = 1.4e-243
Identity = 425/476 (89.29%), Postives = 438/476 (92.02%), Query Frame = 0


Query: 1   MEMGGKNLKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTGGYRHGRVHRGSLRLTG 60
           M+M GKNLKCLATIAFICVFVWSFSLENCH REGR+WGAHRKTGGYRH  VH  S     
Sbjct: 1   MKMCGKNLKCLATIAFICVFVWSFSLENCHGREGRRWGAHRKTGGYRHHHVHVDS----- 60

Query: 61  GGDVVGASLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESACNAEGSTVEVP 120
             DVVGASLAS+GG+     GSFNVLDFGAKGDGE DDTKAFQAAWESACNAEGS VEVP
Sbjct: 61  -EDVVGASLASEGGS-----GSFNVLDFGAKGDGEEDDTKAFQAAWESACNAEGSMVEVP 120

Query: 121 SGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFTKLKGITVKGTG 180
           SG EFLVGPISFSGPNCQPNIVFQLDGKIIAPTS SAWGSGLLQWIEFTKLKGITVKGTG
Sbjct: 121 SGYEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSPSAWGSGLLQWIEFTKLKGITVKGTG 180

Query: 181 TIDGQGSVWW-NHSPTDNPTDENLDKESSNGRLPSTKPTALRFYGSDGVTVSGITIQNSQ 240
           TIDGQGSVWW + SPTD+PTDENLDKESS+GRLP TK TALRFYGSDGVTV+GITIQNSQ
Sbjct: 181 TIDGQGSVWWTDDSPTDDPTDENLDKESSSGRLPRTKLTALRFYGSDGVTVTGITIQNSQ 240

Query: 241 QAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSS 300
           QAHLKFDSCTSV VSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSS
Sbjct: 241 QAHLKFDSCTSVPVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSS 300

Query: 301 SIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQG 360
           SIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKL NTMNGVRIKTWQGGSG VQG
Sbjct: 301 SIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLQNTMNGVRIKTWQGGSGSVQG 360

Query: 361 ILFSNIQVSEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVHFACSDS 420
           ILFSNIQVS+V TP+MIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVH ACSDS
Sbjct: 361 ILFSNIQVSDVGTPVMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVHLACSDS 420

Query: 421 LPCTGVTLDTIQLTGSSTSNQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQARDTC 476
           LPCTGVTLDTIQL GSS SN+PFCWK +GELKTSTVPP+DCLQSGNPSK QA   C
Sbjct: 421 LPCTGVTLDTIQLEGSSRSNEPFCWKAYGELKTSTVPPIDCLQSGNPSKAQAHGFC 465

[Close]

BLAST of Sed0013488 vs. ExPASy Swiss-Prot
Match: Q949Z1 (Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.0e-100
Identity = 184/398 (46.23%), Postives = 247/398 (62.06%), Query Frame = 0


Query: 83  FNVLDFGAKGDGETDDTKAFQAAWESACNAEGSTVEVPSGSEFLVGPISFSGPNCQPNIV 142
           F+V  FGA GDG  DDT AFQ AW++AC  E   V  P G  F +    FSGP C+P +V
Sbjct: 80  FDVTSFGAVGDGSCDDTAAFQDAWKAACAVESGVVLAPEGGVFKITSTIFSGP-CKPGLV 139

Query: 143 FQLDGKIIAPTSSSAW--GSGLLQWIEFTKLKGITVKGTGTIDGQGSVWWNHSPTDNPTD 202
           FQLDG ++ P     W       QW+ F +L G T  G GT++G G  WW     D P  
Sbjct: 140 FQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWW-----DLPCK 199

Query: 203 ENLDKESSNGRLPSTKPTALRFYGSDGVTVSGITIQNSQQAHLKFDSCTSVQVSSLTISS 262
            +   + S+   P   PT +RF+ S+ + V G+ IQNS Q H+KFD C  V ++ + ISS
Sbjct: 200 PHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISS 259

Query: 263 PGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSSSIYIHDVNCGPGHGISIGGLG 322
           P  SPNTDGIHL N+++V I NS ++ GDDCISI TG S + I  V CGP HGISIG LG
Sbjct: 260 PKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLG 319

Query: 323 RDQTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQGILFSNIQVSEVQTPIMIDQYY 382
              ++ACVSN+TVR+  + ++ NG+R+KTWQGG+G V  +LF NIQ+  V   I++DQYY
Sbjct: 320 VHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYY 379

Query: 383 CDGGRCHNGSSAVAISGVNYVNIRGTY--TSTPVHFACSDSLPCTGVTLDTIQLTGSSTS 442
           C    C N +SAV +  V Y NI+GTY   S P+HFACSD++ CT +T+  ++L      
Sbjct: 380 CQSKDCRNETSAVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNITMSEVELLPEEGE 439

Query: 443 --NQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQARDT 475
             + PFCW  +G+ +T T+PP+DCL  G+P   +A D+
Sbjct: 440 LVDDPFCWNAYGKQETLTIPPIDCLLDGSPVVEEAYDS 471

[Close]

BLAST of Sed0013488 vs. ExPASy Swiss-Prot
Match: P35336 (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 5.4e-81
Identity = 161/352 (45.74%), Postives = 216/352 (61.36%), Query Frame = 0


Query: 84  NVLDFGAKGDGETDDTKAFQAAWESACNAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVF 143
           NV DFGAKGDG  DDTKAF+ AW++AC++  S V +     +LV PISFSGP C+  +  
Sbjct: 91  NVDDFGAKGDGR-DDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSGP-CKSGLTM 150

Query: 144 QLDGKIIAPTSSSAWGSGLLQWIEFTKLKGITVKGTGTIDGQGSVWWNHSPTDNPTDENL 203
           Q+ G I A    S +      W+ F  ++ + V+G GTI+G G +WW +S          
Sbjct: 151 QIYGTIEASDDRSDYRKDGRHWLVFDSVQNLRVEGGGTINGNGKIWWQNSC--------- 210

Query: 204 DKESSNGRLP-STKPTALRFYGSDGVTVSGITIQNSQQAHLKFDSCTSVQVSSLTISSPG 263
               +N  LP    PTAL FY S  V V  + I+N+QQ H+ FD+C +VQ S+L +++P 
Sbjct: 211 ---KTNKALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPE 270

Query: 264 DSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSSSIYIHDVNCGPGHGISIGGLGRD 323
           +SPNTDGIH+  +QN+ IS+  +  GDDCISI  GS  + ++D+ CGPGHGISIG LG  
Sbjct: 271 NSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYG 330

Query: 324 QTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQGILFSNIQVSEVQTPIMIDQYYCD 383
            ++A VS+V V   KL  T NGVRIKTWQGGSG    I F N+++  V+ PI+IDQ YCD
Sbjct: 331 NSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCD 390

Query: 384 GGR-CHNGSSAVAISGVNYVNIRGTYTS-TPVHFACSDSLPCTGVTLDTIQL 433
             + C   SSAV +  V Y NI+GT  S   + F CS   PC G+ L+ + L
Sbjct: 391 QDKPCQEQSSAVQVKNVVYQNIKGTCASNVAITFDCSKRFPCQGIVLEDVDL 428

[Close]

BLAST of Sed0013488 vs. ExPASy Swiss-Prot
Match: Q8RY29 (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 302.0 bits (772), Expect = 1.2e-80
Identity = 166/381 (43.57%), Postives = 231/381 (60.63%), Query Frame = 0


Query: 63  DVVGASLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESACNAEGS-TVEVPS 122
           D+ G  L S   AS   P + +V DFGAKGDG+TDDT+AF  AW+ AC++ G+  + VP 
Sbjct: 50  DITG--LRSFVRASLRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPK 109

Query: 123 GSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFTKLKGITVKG--T 182
           G+ +L+  I  +GP C   +  Q+ G + A    S +   + +WI F  +  ++V G  T
Sbjct: 110 GNTYLLKSIQLTGP-CNSILTVQIFGTLSASQKRSDY-KDISKWIMFDGVNNLSVDGGDT 169

Query: 183 GTIDGQGSVWWNHSPTDNPTDENLDKESSNGRLPSTK-PTALRFYGSDGVTVSGITIQNS 242
           G +DG G  WW +S   N               P TK PTAL FY S  + V  + ++N+
Sbjct: 170 GVVDGNGETWWQNSCKRNKAK------------PCTKAPTALTFYNSKSLIVKNLKVRNA 229

Query: 243 QQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGS 302
           QQ  +  + C++VQVS++ +++P DSPNTDGIH+ N+QN+ +S S +  GDDCISI++GS
Sbjct: 230 QQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGS 289

Query: 303 SSIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQ 362
            ++ I+D+ CGPGHGISIG LG D +KA VS VTV   KL  T NGVRIKT+QGGSG   
Sbjct: 290 QNVQINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTAS 349

Query: 363 GILFSNIQVSEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTS-TPVHFACS 422
            I+F NIQ+  V+ PI+IDQ YCD  +C    SAV +  V Y +I GT  S   + F CS
Sbjct: 350 NIIFQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAVQVKNVVYRDISGTSASENAITFNCS 409

Query: 423 DSLPCTGVTLDTIQLTGSSTS 439
            + PC G+ LD + + G   +
Sbjct: 410 KNYPCQGIVLDRVNIKGGKAT 414

[Close]

BLAST of Sed0013488 vs. ExPASy Swiss-Prot
Match: Q94AJ5 (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 2.5e-78
Identity = 157/380 (41.32%), Postives = 225/380 (59.21%), Query Frame = 0


Query: 84  NVLDFGAKGDGETDDTKAFQAAWESACNAEGST-VEVPSGSEFLVGPISFSGPNCQPNIV 143
           +V +FGAKG+G TDDTKAF  AW++AC+++  T + VP     L+ PI  SGP C+  + 
Sbjct: 54  HVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVPENYTCLLRPIDLSGP-CKARLT 113

Query: 144 FQLDGKIIAPTSSSAW-GSGLLQWIEFTKLKGITVKGTGTIDGQGSVWWNHSPTDNPTDE 203
            Q+ G IIAP     W G    +W+ F  L  +TV+G GT++G G  WW  S   N ++ 
Sbjct: 114 LQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKHNHSNP 173

Query: 204 NLDKESSNGRLPSTKPTALRFYGSDGVTVSGITIQNSQQAHLKFDSCTSVQVSSLTISSP 263
                          PTAL F+    + V  + + +SQQ H+   SC  V +S L + +P
Sbjct: 174 -----------CRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAP 233

Query: 264 GDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSSSIYIHDVNCGPGHGISIGGLGR 323
             SPNTDGIH+  S+ ++I N+ ++ GDDCISI   S+ I I ++ CGPGHGISIG LG+
Sbjct: 234 ATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGK 293

Query: 324 DQTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQGILFSNIQVSEVQTPIMIDQYYC 383
            ++   V ++TV    + +T NGVRIKTWQGGSG V  I+F NI+++ V  PI+IDQYYC
Sbjct: 294 SKSWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYC 353

Query: 384 DGGR-CHNGSSAVAISGVNYVNIRGTYTS-TPVHFACSDSLPCTGVTLDTIQLTGSSTS- 443
           D  + C N +SA++I  +++V++RGT  S   +  +CSDS PC  + L  I L  S+   
Sbjct: 354 DSRKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNGDG 413

Query: 444 -NQPFCWKTFGELKTSTVPP 458
             + FCW+ +G       PP
Sbjct: 414 FTESFCWEAYGSSSGQVYPP 421

[Close]

BLAST of Sed0013488 vs. ExPASy Swiss-Prot
Match: P43212 (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 3.6e-77
Identity = 151/352 (42.90%), Postives = 216/352 (61.36%), Query Frame = 0


Query: 83  FNVLDFGAKGDGETDDTKAFQAAWESACNAEGSTVEVPSGSEFLVGPISFSGPNCQPNIV 142
           FNV  +GA GDG+ D T+AF  AW++AC    + + VP   +F+V  + F+GP CQP+  
Sbjct: 59  FNVEKYGAVGDGKHDCTEAFSTAWQAACKKPSAMLLVPGNKKFVVNNLFFNGP-CQPHFT 118

Query: 143 FQLDGKIIAPTSSSAWGSGLLQWIEFTKLKGITVKGTGTIDGQGSVWWNHSPTDNPTDEN 202
           F++DG I A  + ++W +  + W++F KL G T+ G G IDGQG  WW            
Sbjct: 119 FKVDGIIAAYQNPASWKNNRI-WLQFAKLTGFTLMGKGVIDGQGKQWW-----AGQCKWV 178

Query: 203 LDKESSNGRLPSTKPTALRFYGSDGVTVSGITIQNSQQAHLKFDSCTSVQVSSLTISSPG 262
             +E  N R    +PTA++F  S G+ + G+ + NS + HL F +C  V++  ++I++P 
Sbjct: 179 NGREICNDR---DRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPR 238

Query: 263 DSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSSSIYIHDVNCGPGHGISIGGLGRD 322
           DSPNTDGI +  S+N  +  + +  GDDC++I TGSS+I I D+ CGPGHGISIG LGR+
Sbjct: 239 DSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRE 298

Query: 323 QTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQGILFSNIQVSEVQTPIMIDQYYC- 382
            ++A VS V V   K  +T NG+RIKTWQGGSG    I++ N+++   + PI+I+Q+YC 
Sbjct: 299 NSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCT 358

Query: 383 DGGRCHNGSSAVAISGVNYVNIRGT-YTSTPVHFACSDSLPCTGVTLDTIQL 433
               C N  SAV I  V Y NIRGT  T+  +   CSDS+PC  + L  I L
Sbjct: 359 SASACQNQRSAVQIQDVTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDISL 400

[Close]

BLAST of Sed0013488 vs. ExPASy TrEMBL
Match: A0A6J1F9Z9 (polygalacturonase At1g48100-like OS=Cucurbita moschata OX=3662 GN=LOC111442159 PE=3 SV=1)

HSP 1 Score: 868.6 bits (2243), Expect = 1.2e-248
Identity = 430/485 (88.66%), Postives = 449/485 (92.58%), Query Frame = 0


Query: 1   MEMGGKNLKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTGGYRHGRVHR-----GS 60
           MEMGGKNLKCLATIAFIC FVWSFSL+NC AREG+ W AHRKTGGYRHGR+HR     GS
Sbjct: 1   MEMGGKNLKCLATIAFICAFVWSFSLQNCQAREGKHW-AHRKTGGYRHGRIHRDRGGSGS 60

Query: 61  LRLTGGG-----DVVGASLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESAC 120
            RLTG G     DVVGASLAS+G ASKGG G+FNVLDFGAKGDG  DDTKAFQAAWESAC
Sbjct: 61  SRLTGSGHVGSEDVVGASLASKGDASKGGSGNFNVLDFGAKGDGRADDTKAFQAAWESAC 120

Query: 121 NAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFTK 180
           +AE STVEVPSGSEFLVGPISFSGPNC+PNIVFQLDGKIIAPTS SAWGSGLLQWIEFTK
Sbjct: 121 SAEKSTVEVPSGSEFLVGPISFSGPNCKPNIVFQLDGKIIAPTSPSAWGSGLLQWIEFTK 180

Query: 181 LKGITVKGTGTIDGQGSVWWNHSPTDNPTDENLDKESSNGRLPSTKPTALRFYGSDGVTV 240
           LKGITVKGTGTIDGQGSVWWN SPT +PTDENLDKESS+G+LPSTKPTALRFYGSDGVTV
Sbjct: 181 LKGITVKGTGTIDGQGSVWWNDSPTYDPTDENLDKESSSGKLPSTKPTALRFYGSDGVTV 240

Query: 241 SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD 300
           SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD
Sbjct: 241 SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD 300

Query: 301 CISIQTGSSSIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTW 360
           CISIQTGSS++YIH+VNCGPGHGISIGGLGRDQTKACVSNVTVRDVKL NTMNGVRIKTW
Sbjct: 301 CISIQTGSSAVYIHNVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLQNTMNGVRIKTW 360

Query: 361 QGGSGQVQGILFSNIQVSEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTST 420
           QGGSG VQGILFSNIQVS+V+TPIMIDQYYCDGG CHNGSSAVAISGVNYVNIRGTYTST
Sbjct: 361 QGGSGLVQGILFSNIQVSDVKTPIMIDQYYCDGGSCHNGSSAVAISGVNYVNIRGTYTST 420

Query: 421 PVHFACSDSLPCTGVTLDTIQLTGSSTSNQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQ 476
           PVH ACSDSLPCTGVTLDTIQL GS  SN+PFCWK +GELKTSTVP +DCLQSGNP K Q
Sbjct: 421 PVHLACSDSLPCTGVTLDTIQLEGSGHSNEPFCWKAYGELKTSTVPAIDCLQSGNPGKAQ 480

[Close]

BLAST of Sed0013488 vs. ExPASy TrEMBL
Match: A0A6J1J1T6 (polygalacturonase At1g48100-like OS=Cucurbita maxima OX=3661 GN=LOC111481937 PE=3 SV=1)

HSP 1 Score: 855.1 bits (2208), Expect = 1.4e-244
Identity = 424/485 (87.42%), Postives = 445/485 (91.75%), Query Frame = 0


Query: 1   MEMGGKNLKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTGGYRHGRVHR-----GS 60
           MEMGGKNLKCLATIAFIC FVWSFSL+NC AR G+ W AHRKTGGYRHGR+HR      S
Sbjct: 1   MEMGGKNLKCLATIAFICAFVWSFSLQNCQARGGKHW-AHRKTGGYRHGRIHRHRGGSSS 60

Query: 61  LRLTGGG-----DVVGASLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESAC 120
           L LT  G     DVVGASLAS+G ASKGG G+FNVLDFGAKGDG  DDTKAFQAAWESAC
Sbjct: 61  LGLTDSGHVGSEDVVGASLASKGDASKGGSGNFNVLDFGAKGDGRADDTKAFQAAWESAC 120

Query: 121 NAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFTK 180
           NAE STVEVPSGSEFLVGPISFSGPNC+PNIVFQLDGKIIAPTS SAWGSGLLQWIEFTK
Sbjct: 121 NAEKSTVEVPSGSEFLVGPISFSGPNCKPNIVFQLDGKIIAPTSPSAWGSGLLQWIEFTK 180

Query: 181 LKGITVKGTGTIDGQGSVWWNHSPTDNPTDENLDKESSNGRLPSTKPTALRFYGSDGVTV 240
           LKGITVKGTGTIDGQGSVWWN SPT +PTDENLDKESS+ +LPSTKPTALRFYGSDGVTV
Sbjct: 181 LKGITVKGTGTIDGQGSVWWNDSPTYDPTDENLDKESSSRKLPSTKPTALRFYGSDGVTV 240

Query: 241 SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD 300
           SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD
Sbjct: 241 SGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDD 300

Query: 301 CISIQTGSSSIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTW 360
           CISIQTGSS++YIH+VNCGPGHGISIGGLGRDQTKACVSNVTVRDVKL NTMNGVRIKTW
Sbjct: 301 CISIQTGSSAVYIHNVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLQNTMNGVRIKTW 360

Query: 361 QGGSGQVQGILFSNIQVSEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTST 420
           QGGSG VQGILFSNIQVS+V+TPIMIDQYYCDGG CHNGSSAVAISGVNYVNIRGTYTST
Sbjct: 361 QGGSGLVQGILFSNIQVSDVKTPIMIDQYYCDGGSCHNGSSAVAISGVNYVNIRGTYTST 420

Query: 421 PVHFACSDSLPCTGVTLDTIQLTGSSTSNQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQ 476
           PVH ACSDSLPCTGVTLDTIQL GS  SN+PFCWK +GELKTSTVP ++CLQSGNP K Q
Sbjct: 421 PVHLACSDSLPCTGVTLDTIQLEGSGRSNEPFCWKAYGELKTSTVPAIECLQSGNPGKAQ 480

[Close]

BLAST of Sed0013488 vs. ExPASy TrEMBL
Match: A0A6J1EJN2 (polygalacturonase At1g48100 OS=Cucurbita moschata OX=3662 GN=LOC111435099 PE=3 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 6.8e-244
Identity = 425/476 (89.29%), Postives = 438/476 (92.02%), Query Frame = 0


Query: 1   MEMGGKNLKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTGGYRHGRVHRGSLRLTG 60
           M+M GKNLKCLATIAFICVFVWSFSLENCH REGR+WGAHRKTGGYRH  VH  S     
Sbjct: 1   MKMCGKNLKCLATIAFICVFVWSFSLENCHGREGRRWGAHRKTGGYRHHHVHVDS----- 60

Query: 61  GGDVVGASLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESACNAEGSTVEVP 120
             DVVGASLAS+GG+     GSFNVLDFGAKGDGE DDTKAFQAAWESACNAEGS VEVP
Sbjct: 61  -EDVVGASLASEGGS-----GSFNVLDFGAKGDGEEDDTKAFQAAWESACNAEGSMVEVP 120

Query: 121 SGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFTKLKGITVKGTG 180
           SG EFLVGPISFSGPNCQPNIVFQLDGKIIAPTS SAWGSGLLQWIEFTKLKGITVKGTG
Sbjct: 121 SGYEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSPSAWGSGLLQWIEFTKLKGITVKGTG 180

Query: 181 TIDGQGSVWW-NHSPTDNPTDENLDKESSNGRLPSTKPTALRFYGSDGVTVSGITIQNSQ 240
           TIDGQGSVWW + SPTD+PTDENLDKESS+GRLP TK TALRFYGSDGVTV+GITIQNSQ
Sbjct: 181 TIDGQGSVWWTDDSPTDDPTDENLDKESSSGRLPRTKLTALRFYGSDGVTVTGITIQNSQ 240

Query: 241 QAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSS 300
           QAHLKFDSCTSV VSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSS
Sbjct: 241 QAHLKFDSCTSVPVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSS 300

Query: 301 SIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQG 360
           SIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKL NTMNGVRIKTWQGGSG VQG
Sbjct: 301 SIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLQNTMNGVRIKTWQGGSGSVQG 360

Query: 361 ILFSNIQVSEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVHFACSDS 420
           ILFSNIQVS+V TP+MIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVH ACSDS
Sbjct: 361 ILFSNIQVSDVGTPVMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVHLACSDS 420

Query: 421 LPCTGVTLDTIQLTGSSTSNQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQARDTC 476
           LPCTGVTLDTIQL GSS SN+PFCWK +GELKTSTVPP+DCLQSGNPSK QA   C
Sbjct: 421 LPCTGVTLDTIQLEGSSRSNEPFCWKAYGELKTSTVPPIDCLQSGNPSKAQAHGFC 465

[Close]

BLAST of Sed0013488 vs. ExPASy TrEMBL
Match: A0A6J1JNK8 (polygalacturonase At1g48100 OS=Cucurbita maxima OX=3661 GN=LOC111486313 PE=3 SV=1)

HSP 1 Score: 849.4 bits (2193), Expect = 7.5e-243
Identity = 422/476 (88.66%), Postives = 437/476 (91.81%), Query Frame = 0


Query: 1   MEMGGKNLKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTGGYRHGRVHRGSLRLTG 60
           M+M GKNLKCLATIAFIC+FVWSFSLENCH REGR+WGAHRKTGGYRH  VH  S     
Sbjct: 1   MKMCGKNLKCLATIAFICIFVWSFSLENCHGREGRRWGAHRKTGGYRHHHVHVES----- 60

Query: 61  GGDVVGASLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESACNAEGSTVEVP 120
             DVVG+SLAS+GG+     GSFNVLDFGAKGDGE DDTKAFQAAWESACNAEGS VEVP
Sbjct: 61  -EDVVGSSLASEGGS-----GSFNVLDFGAKGDGEEDDTKAFQAAWESACNAEGSMVEVP 120

Query: 121 SGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFTKLKGITVKGTG 180
           SG EFLVGPISFSGPNCQPNIVFQLDGKIIAPTS SAWGSGLLQWIEFTKLKGITVKGTG
Sbjct: 121 SGYEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSPSAWGSGLLQWIEFTKLKGITVKGTG 180

Query: 181 TIDGQGSVWW-NHSPTDNPTDENLDKESSNGRLPSTKPTALRFYGSDGVTVSGITIQNSQ 240
           TIDGQGSVWW + SPTD+PTDENLDKESS+GRLP TKPTALRFYGSDGVTV+GITIQNSQ
Sbjct: 181 TIDGQGSVWWSDDSPTDDPTDENLDKESSSGRLPRTKPTALRFYGSDGVTVTGITIQNSQ 240

Query: 241 QAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSS 300
           QAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSS
Sbjct: 241 QAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSS 300

Query: 301 SIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQG 360
           SIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKL NTMNGVRIKTWQGGSG V G
Sbjct: 301 SIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLQNTMNGVRIKTWQGGSGSVLG 360

Query: 361 ILFSNIQVSEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVHFACSDS 420
           ILFSNIQVS+V TP+ IDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTS PVH ACSDS
Sbjct: 361 ILFSNIQVSDVGTPVKIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSRPVHLACSDS 420

Query: 421 LPCTGVTLDTIQLTGSSTSNQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQARDTC 476
           LPCTGVTLDTIQL GSS SN+PFCWK +GELKTSTVPP+DCLQSGNPSK QA   C
Sbjct: 421 LPCTGVTLDTIQLEGSSHSNEPFCWKAYGELKTSTVPPIDCLQSGNPSKAQAHGFC 465

[Close]

BLAST of Sed0013488 vs. ExPASy TrEMBL
Match: A0A1S3B8B8 (polygalacturonase At1g48100 OS=Cucumis melo OX=3656 GN=LOC103487102 PE=3 SV=1)

HSP 1 Score: 833.2 bits (2151), Expect = 5.5e-238
Identity = 414/486 (85.19%), Postives = 436/486 (89.71%), Query Frame = 0


Query: 1   MEMGGKNLKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTGGYRHGRVHR------G 60
           MEMG KNLKCL TIAFICVFVWSFSL NCHA         RKT GYRH +VHR       
Sbjct: 1   MEMGRKNLKCLTTIAFICVFVWSFSLHNCHA---------RKTVGYRHWQVHRHHQGSGR 60

Query: 61  SLRLTGGG-----DVVGASLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESA 120
           SLRLTG G     DVVG SLAS+G A+ GG G+FNVLDFGAKGDGETDDTKAFQ+AWESA
Sbjct: 61  SLRLTGSGHVGSEDVVGTSLASKGRATNGGSGNFNVLDFGAKGDGETDDTKAFQSAWESA 120

Query: 121 CNAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFT 180
           CN EGS VEVPSGS FLVGPISFSGPNCQPNI+FQLDGKIIAPTS SAWGSG+LQWIEFT
Sbjct: 121 CNVEGSVVEVPSGSNFLVGPISFSGPNCQPNIMFQLDGKIIAPTSPSAWGSGILQWIEFT 180

Query: 181 KLKGITVKGTGTIDGQGSVWWNHSPTDNPTDENLDKESSNGRLPSTKPTALRFYGSDGVT 240
           KLKGITVKGTGTIDGQGSVWWN SPT+NPTDENLDKESS G+LPSTKPTALRFYGSD VT
Sbjct: 181 KLKGITVKGTGTIDGQGSVWWNDSPTNNPTDENLDKESSGGKLPSTKPTALRFYGSDEVT 240

Query: 241 VSGITIQNSQQAHLKFDSCTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGD 300
           VSGITIQNSQ+AHLKFDSCT+VQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGD
Sbjct: 241 VSGITIQNSQKAHLKFDSCTAVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGD 300

Query: 301 DCISIQTGSSSIYIHDVNCGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKT 360
           DCISIQTGSS +YIH+VNCGPGHGISIGGLGRD+TKACVSN+TVRDVKL NTMNGVRIKT
Sbjct: 301 DCISIQTGSSGVYIHNVNCGPGHGISIGGLGRDETKACVSNITVRDVKLQNTMNGVRIKT 360

Query: 361 WQGGSGQVQGILFSNIQVSEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTS 420
           WQGGSG VQGILFSNIQV++V+ PIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTS
Sbjct: 361 WQGGSGSVQGILFSNIQVTDVRIPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTS 420

Query: 421 TPVHFACSDSLPCTGVTLDTIQLTGSSTSNQPFCWKTFGELKTSTVPPLDCLQSGNPSKP 476
           TPV FACSDSLPCTGVTLDTIQL GS  SN+PFCWK +GELKTSTVPP+DCLQSGNP K 
Sbjct: 421 TPVRFACSDSLPCTGVTLDTIQLEGSDGSNEPFCWKAYGELKTSTVPPVDCLQSGNPFKA 477

[Close]

BLAST of Sed0013488 vs. TAIR 10
Match: AT5G14650.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 560.1 bits (1442), Expect = 1.7e-159
Identity = 281/474 (59.28%), Postives = 338/474 (71.31%), Query Frame = 0


Query: 8   LKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTGGYRHGRVHRGSLRLTGGGDVVGA 67
           LKCL+    + + ++S     C AR    W  +R++                        
Sbjct: 6   LKCLSLNFLLLISLFSSRFGTCDARYSVYWKGNRRS------------------------ 65

Query: 68  SLASQGGASKGGPGSFNVLDFGAKGDGETDDTKAFQAAWESACNAEGSTVEVPSGSEFLV 127
              ++GG+S    G+ NVLD GAKGDG +DDTKAF+ AW+ AC    ST+ VPSGS FLV
Sbjct: 66  --IAEGGSS----GTINVLDHGAKGDGTSDDTKAFEDAWQVACKVAASTLLVPSGSTFLV 125

Query: 128 GPISFSGPNCQPNIVFQLDGKIIAPTSSSAWGSGLLQWIEFTKLKGITVKGTGTIDGQGS 187
           GP+SF G  C+  IVFQL+GKIIAPTS+SAWGSGLLQWIEF  L+GIT+KG G IDG+GS
Sbjct: 126 GPVSFLGKECKEKIVFQLEGKIIAPTSASAWGSGLLQWIEFKALQGITIKGKGIIDGRGS 185

Query: 188 VWWNHSPTDNPTDENLDKESSNGRLPSTKPTALRFYGSDGVTVSGITIQNSQQAHLKFDS 247
           VWWN              +    ++P TKPTALRFYGS+GVTVSGITIQNS Q HLKFD+
Sbjct: 186 VWWN--------------DMMGTKMPRTKPTALRFYGSNGVTVSGITIQNSPQTHLKFDN 245

Query: 248 CTSVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSSSIYIHDVN 307
           C S+QVS  T SSPGDSPNTDGIHLQNSQ+ +I  S LACGDDCISIQTG S+I IHDV+
Sbjct: 246 CISIQVSDFTTSSPGDSPNTDGIHLQNSQDAVIYRSTLACGDDCISIQTGCSNINIHDVD 305

Query: 308 CGPGHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQGILFSNIQV 367
           CGPGHGISIGGLG+D TKACVSN+TVRDV +H T NGVRIK+WQGGSG V+ ++FSNIQV
Sbjct: 306 CGPGHGISIGGLGKDNTKACVSNITVRDVTMHETTNGVRIKSWQGGSGSVKQVMFSNIQV 365

Query: 368 SEVQTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVHFACSDSLPCTGVTL 427
           S V  PI+IDQYYCDGG CHN +SAVA+S +NY+NI+GTYT  PV FACSDSLPCTG++L
Sbjct: 366 SNVANPIIIDQYYCDGGGCHNETSAVAVSNINYINIKGTYTKEPVRFACSDSLPCTGISL 425

Query: 428 DTIQL---TGSSTSNQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQAR---DTC 476
            TI+L   TG ++S  PFCWK  GELKT T+PP+ CL++    +  +R   D C
Sbjct: 426 STIELKPATGKASSLDPFCWKAHGELKTKTLPPIQCLKTEKSPEAASRSNNDAC 435

[Close]

BLAST of Sed0013488 vs. TAIR 10
Match: AT1G60590.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 529.3 bits (1362), Expect = 3.3e-150
Identity = 274/521 (52.59%), Postives = 338/521 (64.88%), Query Frame = 0


Query: 8   LKCLATIAFICVFVWSFSLENCHAREGRQWGAHRKTG----------------GYRHGRV 67
           L+ +  +  + + VWS +LE C AR GR W  H ++                    H   
Sbjct: 9   LRSITMMTLVTILVWSATLETCIARRGRHWRHHHRSSSSLSDSLSSKKPKSHENNHHHMS 68

Query: 68  HRG----SLRLTGGGDVVGASLASQGGASKGGP-------------------GSFNVLDF 127
           H+      ++        G+ + SQ    +  P                     FNVLDF
Sbjct: 69  HKSKPKPKMKTQPPKSNDGSPVVSQPPQVQQPPPPHVQPPPTPLPLQPVEDSQQFNVLDF 128

Query: 128 GAKGDGETDDTKAFQAAWESACNAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVFQLDGK 187
           GAKGDG +DDT+AF+AAW SAC  E ST+ +P    FLVGPISFSGP CQ NIVFQL+G 
Sbjct: 129 GAKGDGMSDDTQAFEAAWASACKVEASTMIIPPDYIFLVGPISFSGPYCQANIVFQLEGM 188

Query: 188 IIAPTSSSAWGSGLLQWIEFTKLKGITVKGTGTIDGQGSVWWNHS-PTDNPTDENLD--- 247
           I+APT + +WG GL+ WIEFTKL GIT++G G IDG+G+VWW     +D P D++     
Sbjct: 189 IVAPTDTESWGGGLMWWIEFTKLSGITIQGNGVIDGRGTVWWQQDYLSDYPIDDDFKLIV 248

Query: 248 --------------KESSNGRLPSTKPTALRFYGSDGVTVSGITIQNSQQAHLKFDSCTS 307
                         +   N R+PS KPTALRFYGS  VTV+GITIQNS Q HLKFD+C  
Sbjct: 249 PLNNSVQERPPMPIRSELNWRMPSIKPTALRFYGSIDVTVTGITIQNSPQCHLKFDNCVK 308

Query: 308 VQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSSSIYIHDVNCGP 367
           V V  + +SSPGDSPNTDGIHLQN+++V+I  + LACGDDCISIQTG S++Y+H+VNCGP
Sbjct: 309 VLVHDVNVSSPGDSPNTDGIHLQNTRDVMIHTTTLACGDDCISIQTGCSNVYVHNVNCGP 368

Query: 368 GHGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQGILFSNIQVSEV 427
           GHGISIG LG+D TKACVSN+TVRDV +HNTM GVRIKTWQGG G V+GILFSNIQ++EV
Sbjct: 369 GHGISIGSLGKDSTKACVSNITVRDVVMHNTMTGVRIKTWQGGIGSVKGILFSNIQLTEV 428

Query: 428 QTPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVHFACSDSLPCTGVTLDTI 469
           Q PI+IDQ+YCD  +C N +SAV++ GV Y  IRGTYT  PVHFACSDS PC  V L  I
Sbjct: 429 QLPIVIDQFYCDHSKCMNHTSAVSVEGVTYEKIRGTYTVKPVHFACSDSFPCIDVQLSGI 488

[Close]

BLAST of Sed0013488 vs. TAIR 10
Match: AT1G10640.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 512.3 bits (1318), Expect = 4.2e-145
Identity = 270/530 (50.94%), Postives = 338/530 (63.77%), Query Frame = 0


Query: 7   NLKCLATIAFICVFVWSFSLENCHAREGRQW-GAHRKTGGY----------RHGRVHRGS 66
           +L+ +  +  + V VWS +LE C AR GR W  +HR +              HG  H  S
Sbjct: 8   SLRSITMMILMAVLVWSVTLETCIARRGRHWRHSHRSSSDLSDSLSNKKPKSHGNSHHHS 67

Query: 67  LR-----------------------------LTGGGDVVGASLASQGGASKGGPGSFNVL 126
                                          ++G   V    L  Q G+       FNV+
Sbjct: 68  SHNNNHHHKSKPKPKPKLKTPPKAHDNNSPVVSGPPKVQPPPLPPQKGSQ-----VFNVM 127

Query: 127 DFGAKGDGETDDTKAFQAAWESACNAEGSTVEVPSGSEFLVGPISFSGPNCQPNIVFQLD 186
           DFGAKGDG+ DDTKAF+AAW +AC  E S + VP    +LVGPISFSGP CQ NIVFQLD
Sbjct: 128 DFGAKGDGKCDDTKAFEAAWVAACKIEASVMLVPPEYTYLVGPISFSGPYCQANIVFQLD 187

Query: 187 GKIIAPTSSSAWGSGLLQWIEFTKLKGITVKGTGTIDGQGSVWWNHS------------P 246
           G IIAPT S  WG GL+ WI+FTKLKGI V+G G IDG+GS WW               P
Sbjct: 188 GTIIAPTDSKTWGKGLMWWIDFTKLKGIKVQGKGVIDGRGSGWWQQDSPFIDSDTKLIVP 247

Query: 247 TDNPTDENLD---KESSNGRLPSTKPTALRFYGSDGVTVSGITIQNSQQAHLKFDSCTSV 306
            +N  ++N     +   + R+PS KPTALRF GS GV V+GITIQNS Q HLKFD C  V
Sbjct: 248 LNNSANQNPPMPIRSELDERMPSIKPTALRFSGSFGVEVTGITIQNSPQCHLKFDDCVGV 307

Query: 307 QVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSSSIYIHDVNCGPG 366
            V  + +SSPGDSPNTDGIHLQN+++V+I ++ LACGDDCISIQTG S++++H+VNCGPG
Sbjct: 308 VVHDIAVSSPGDSPNTDGIHLQNTKDVLIHSTTLACGDDCISIQTGCSNVFVHNVNCGPG 367

Query: 367 HGISIGGLGRDQTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQGILFSNIQVSEVQ 426
           HGISIG LG++ TKACVSN+TVRDV +HNTM GVRIKTWQGG G V+GI+FSNIQ+++VQ
Sbjct: 368 HGISIGSLGKEGTKACVSNITVRDVAMHNTMTGVRIKTWQGGVGSVKGIIFSNIQLNQVQ 427

Query: 427 TPIMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVHFACSDSLPCTGVTLDTIQ 476
            PI I+Q+YCD  +C N +SAVA+ GV Y  I+GTYT  PVHFACSD+ PC  V L +I+
Sbjct: 428 IPITINQFYCDHSKCKNQTSAVAVEGVTYERIKGTYTVKPVHFACSDNFPCVDVQLSSIE 487

[Close]

BLAST of Sed0013488 vs. TAIR 10
Match: AT3G26610.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 396.4 bits (1017), Expect = 3.3e-110
Identity = 194/396 (48.99%), Postives = 268/396 (67.68%), Query Frame = 0


Query: 81  GSFNVLDFGAKGDGETDDTKAFQAAWESACNAEGSTVEVPSGSEFLVGPISFSGPNCQPN 140
           G FN+  +GAKGDG +DD+KA   AW++AC   G  VE+P+G++FLV  ++  GP C+  
Sbjct: 65  GVFNIFSYGAKGDGVSDDSKALVGAWKAACKVVGGKVEIPAGTQFLVKAVTLQGP-CKEE 124

Query: 141 IVFQLDGKIIAPTSSSAW-GSGLLQWIEFTKLKGITVKGTGTIDGQGSVWWNHSPTDNPT 200
            V Q++G ++AP    +W  S L QW+ F  +  +T++G+GT++G+G  WWN        
Sbjct: 125 TVVQIEGILVAPEKIGSWPNSSLFQWLNFKWVSHLTIQGSGTLNGRGYNWWNL------- 184

Query: 201 DENLDKESSNGRLPSTKPTALRFYGSDGVTVSGITIQNSQQAHLKFDSCTSVQVSSLTIS 260
            +    ++ N  +P  KPTALRFY S+ VTV  I+I NS   HLKFD    V+V+++TIS
Sbjct: 185 -DTYQTQTRNKYIPPMKPTALRFYSSNNVTVRDISIVNSPLCHLKFDDSDGVKVNNITIS 244

Query: 261 SPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSSSIYIHDVNCGPGHGISIGGL 320
           SP +SPNTDGIHLQN++NV I +SN+ACGDDC+SIQTGSS+++IH +NCGPGHGISIGGL
Sbjct: 245 SPENSPNTDGIHLQNTRNVEIQHSNIACGDDCVSIQTGSSNVHIHHINCGPGHGISIGGL 304

Query: 321 GRDQTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQGILFSNIQVSEVQTPIMIDQY 380
           G+D++ ACVS++ V D+ + NT+ GVRIKTWQGG G V+ + FSNIQV +V+ PI+IDQY
Sbjct: 305 GKDKSVACVSDIIVEDISIQNTLAGVRIKTWQGGLGVVKNLTFSNIQVKDVKVPIVIDQY 364

Query: 381 YCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVHFACSDSLPCTGVTLDTIQLTGSS--- 440
           YCD  +C N + AV+ISGV Y NI G++T  PV  ACS+++PC  V L  I+L  S    
Sbjct: 365 YCDKSKCKNQTRAVSISGVKYNNIVGSFTVQPVRIACSNNVPCMDVDLMDIRLRPSGGIR 424

Query: 441 -----TSNQPFCWKTFGELKTSTVPPL--DCLQSGN 466
                   Q  CW ++G+ +   VP     CL+  N
Sbjct: 425 GLQTHQQQQALCWNSYGKTQGPLVPSSIGYCLRKSN 451

[Close]

BLAST of Sed0013488 vs. TAIR 10
Match: AT1G48100.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 368.6 bits (945), Expect = 7.4e-102
Identity = 184/398 (46.23%), Postives = 247/398 (62.06%), Query Frame = 0


Query: 83  FNVLDFGAKGDGETDDTKAFQAAWESACNAEGSTVEVPSGSEFLVGPISFSGPNCQPNIV 142
           F+V  FGA GDG  DDT AFQ AW++AC  E   V  P G  F +    FSGP C+P +V
Sbjct: 80  FDVTSFGAVGDGSCDDTAAFQDAWKAACAVESGVVLAPEGGVFKITSTIFSGP-CKPGLV 139

Query: 143 FQLDGKIIAPTSSSAW--GSGLLQWIEFTKLKGITVKGTGTIDGQGSVWWNHSPTDNPTD 202
           FQLDG ++ P     W       QW+ F +L G T  G GT++G G  WW     D P  
Sbjct: 140 FQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWW-----DLPCK 199

Query: 203 ENLDKESSNGRLPSTKPTALRFYGSDGVTVSGITIQNSQQAHLKFDSCTSVQVSSLTISS 262
            +   + S+   P   PT +RF+ S+ + V G+ IQNS Q H+KFD C  V ++ + ISS
Sbjct: 200 PHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISS 259

Query: 263 PGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSSSIYIHDVNCGPGHGISIGGLG 322
           P  SPNTDGIHL N+++V I NS ++ GDDCISI TG S + I  V CGP HGISIG LG
Sbjct: 260 PKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLG 319

Query: 323 RDQTKACVSNVTVRDVKLHNTMNGVRIKTWQGGSGQVQGILFSNIQVSEVQTPIMIDQYY 382
              ++ACVSN+TVR+  + ++ NG+R+KTWQGG+G V  +LF NIQ+  V   I++DQYY
Sbjct: 320 VHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYY 379

Query: 383 CDGGRCHNGSSAVAISGVNYVNIRGTY--TSTPVHFACSDSLPCTGVTLDTIQLTGSSTS 442
           C    C N +SAV +  V Y NI+GTY   S P+HFACSD++ CT +T+  ++L      
Sbjct: 380 CQSKDCRNETSAVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNITMSEVELLPEEGE 439

Query: 443 --NQPFCWKTFGELKTSTVPPLDCLQSGNPSKPQARDT 475
             + PFCW  +G+ +T T+PP+DCL  G+P   +A D+
Sbjct: 440 LVDDPFCWNAYGKQETLTIPPIDCLLDGSPVVEEAYDS 471

The following BLAST results are available for this feature:

BLAST of Sed0013488 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935210.1	2.5e-248	88.66	polygalacturonase At1g48100-like [Cucurbita moschata]	[more]
XP_023527919.1	9.7e-245	87.63	polygalacturonase At1g48100-like [Cucurbita pepo subsp. pepo]	[more]
XP_022983321.1	2.8e-244	87.42	polygalacturonase At1g48100-like [Cucurbita maxima]	[more]
XP_038905486.1	1.1e-243	86.60	polygalacturonase At1g48100 [Benincasa hispida]	[more]
XP_022928201.1	1.4e-243	89.29	polygalacturonase At1g48100 [Cucurbita moschata]	[more]

BLAST of Sed0013488 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949Z1	1.0e-100	46.23	Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV...	[more]
P35336	5.4e-81	45.74	Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1	[more]
Q8RY29	1.2e-80	43.57	Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2	[more]
Q94AJ5	2.5e-78	41.32	Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g8017...	[more]
P43212	3.6e-77	42.90	Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1	[more]

BLAST of Sed0013488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9Z9	1.2e-248	88.66	polygalacturonase At1g48100-like OS=Cucurbita moschata OX=3662 GN=LOC111442159 P...	[more]
A0A6J1J1T6	1.4e-244	87.42	polygalacturonase At1g48100-like OS=Cucurbita maxima OX=3661 GN=LOC111481937 PE=...	[more]
A0A6J1EJN2	6.8e-244	89.29	polygalacturonase At1g48100 OS=Cucurbita moschata OX=3662 GN=LOC111435099 PE=3 S...	[more]
A0A6J1JNK8	7.5e-243	88.66	polygalacturonase At1g48100 OS=Cucurbita maxima OX=3661 GN=LOC111486313 PE=3 SV=...	[more]
A0A1S3B8B8	5.5e-238	85.19	polygalacturonase At1g48100 OS=Cucumis melo OX=3656 GN=LOC103487102 PE=3 SV=1	[more]

BLAST of Sed0013488 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14650.1	1.7e-159	59.28	Pectin lyase-like superfamily protein	[more]
AT1G60590.1	3.3e-150	52.59	Pectin lyase-like superfamily protein	[more]
AT1G10640.1	4.2e-145	50.94	Pectin lyase-like superfamily protein	[more]
AT3G26610.1	3.3e-110	48.99	Pectin lyase-like superfamily protein	[more]
AT1G48100.1	7.4e-102	46.23	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 357..378 e-value: 6200.0 score: 1.6 coord: 225..274 e-value: 15.0 score: 14.5 coord: 275..296 e-value: 190.0 score: 10.8 coord: 328..349 e-value: 2.1 score: 17.3
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 115..439 e-value: 6.1E-87 score: 291.7
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 67..467 e-value: 1.3E-124 score: 418.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..216
None	No IPR available	PANTHER	PTHR31375:SF171	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 10..466
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 10..466
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 79..464

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013488.1	Sed0013488.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0009827	plant-type cell wall modification
cellular_component	GO:0009505	plant-type cell wall
molecular_function	GO:0047911	galacturan 1,4-alpha-galacturonidase activity
molecular_function	GO:0004650	polygalacturonase activity