Sed0013421 (gene) Chayote v1

Overview


Name	Sed0013421
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Lateral organ boundaries (LOB) domain family protein
Location	LG08: 38024923 .. 38025435 (-)
RNA-Seq Expression	Sed0013421
Synteny	Sed0013421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCATCATCAACAGTAGTAACTCCAACAAGTCACTATTGCAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCGCACCCGGATGTATTTTTGCACCATATTTCCCACCAGAGGAACCTCAAAAATTCGCCAACGTTCACAAGGTTTTCGGAGCCAGCAACGTCGCCAAGCTCCTCAACGAAGTTCTGCCTCATCAGCGACCAGACGCGGTCGTTTCGCTTGCGTACGAGGCCGAGGCTAGAATCAGAGATCCCGTTTACGGCTGCGTTGGTGCGATTTCCTTCCTTCAAAAACAGGTCCAAAGGCTCCAAAAGGAACTTGATGCAGCTAAAGCTTGCCTTTTTCTCCACTATTGCAATGATTTTTCAGGTCCTTATTCATCACAGCCCCAAATTGTTTGCCCTCCTCTGATTTGGAACAACAACAACAATAATAATAATTATGATGTTAATTCTGCTAATTCTGCTAATTCTTCTGCTATGTATTTTAATGGAGGATTTTGA

mRNA sequence

ATGGCATCATCATCAACAGTAGTAACTCCAACAAGTCACTATTGCAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCGCACCCGGATGTATTTTTGCACCATATTTCCCACCAGAGGAACCTCAAAAATTCGCCAACGTTCACAAGGTTTTCGGAGCCAGCAACGTCGCCAAGCTCCTCAACGAAGTTCTGCCTCATCAGCGACCAGACGCGGTCGTTTCGCTTGCGTACGAGGCCGAGGCTAGAATCAGAGATCCCGTTTACGGCTGCGTTGGTGCGATTTCCTTCCTTCAAAAACAGGTCCAAAGGCTCCAAAAGGAACTTGATGCAGCTAAAGCTTGCCTTTTTCTCCACTATTGCAATGATTTTTCAGGTCCTTATTCATCACAGCCCCAAATTGTTTGCCCTCCTCTGATTTGGAACAACAACAACAATAATAATAATTATGATGTTAATTCTGCTAATTCTGCTAATTCTTCTGCTATGTATTTTAATGGAGGATTTTGA

Coding sequence (CDS)

ATGGCATCATCATCAACAGTAGTAACTCCAACAAGTCACTATTGCAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCGCACCCGGATGTATTTTTGCACCATATTTCCCACCAGAGGAACCTCAAAAATTCGCCAACGTTCACAAGGTTTTCGGAGCCAGCAACGTCGCCAAGCTCCTCAACGAAGTTCTGCCTCATCAGCGACCAGACGCGGTCGTTTCGCTTGCGTACGAGGCCGAGGCTAGAATCAGAGATCCCGTTTACGGCTGCGTTGGTGCGATTTCCTTCCTTCAAAAACAGGTCCAAAGGCTCCAAAAGGAACTTGATGCAGCTAAAGCTTGCCTTTTTCTCCACTATTGCAATGATTTTTCAGGTCCTTATTCATCACAGCCCCAAATTGTTTGCCCTCCTCTGATTTGGAACAACAACAACAATAATAATAATTATGATGTTAATTCTGCTAATTCTGCTAATTCTTCTGCTATGTATTTTAATGGAGGATTTTGA

Protein sequence

MASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLHYCNDFSGPYSSQPQIVCPPLIWNNNNNNNNYDVNSANSANSSAMYFNGGF

Homology

[Close]

BLAST of Sed0013421 vs. NCBI nr
Match: XP_022994675.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita maxima])

HSP 1 Score: 256.1 bits (653), Expect = 2.1e-64
Identity = 132/169 (78.11%), Postives = 142/169 (84.02%), Query Frame = 0


Query: 1   MASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAK 60
           M SSS   T TSHY SPCAACKFLRRKC  GC++APYFPPE+PQKFANVHKVFGASNVAK
Sbjct: 1   MGSSSR--TETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAK 60

Query: 61  LLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLH 120
           LLNEVLPHQR DAVVSLAYEAEARI+DPVYGCVGAISFLQKQVQRLQKELDAAKA L L 
Sbjct: 61  LLNEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISFLQKQVQRLQKELDAAKARLRLF 120

Query: 121 YCNDFSGPYSSQPQIVCPPLIWNNNNNNNNYDVNSANSANSSAMYFNGG 170
              DFS P+SSQPQI+ PP+IW    N+NNYD+  AN    S+MYFNGG
Sbjct: 121 SFTDFSAPFSSQPQIISPPMIW----NSNNYDIVYAN----SSMYFNGG 159

[Close]

BLAST of Sed0013421 vs. NCBI nr
Match: XP_023542328.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 131/169 (77.51%), Postives = 141/169 (83.43%), Query Frame = 0


Query: 1   MASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAK 60
           M SSS   T TSHY SPCAACKFLRRKC  GC++APYFPPE+PQKFANVHKVFGASNVAK
Sbjct: 1   MGSSSR--TETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAK 60

Query: 61  LLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLH 120
           LLNEVLPHQR DAVVSLAYEAEARI+DPVYGCVGAIS LQKQVQRLQKELDAAKA L L 
Sbjct: 61  LLNEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLF 120

Query: 121 YCNDFSGPYSSQPQIVCPPLIWNNNNNNNNYDVNSANSANSSAMYFNGG 170
              DFS P+SSQPQI+ PP+IW    N+NNYD+  AN    S+MYFNGG
Sbjct: 121 SFTDFSAPFSSQPQIISPPMIW----NSNNYDIVYAN----SSMYFNGG 159

[Close]

BLAST of Sed0013421 vs. NCBI nr
Match: KGN64334.1 (hypothetical protein Csa_013854 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 126/164 (76.83%), Postives = 139/164 (84.76%), Query Frame = 0


Query: 9   TPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPH 68
           T ++HY SPCAACKFLRRKC  GC+FAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPH
Sbjct: 5   TTSNHYYSPCAACKFLRRKCLAGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPH 64

Query: 69  QRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLHYCNDFSGP 128
           QR DAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKA LFL+ C DFS P
Sbjct: 65  QRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKARLFLYSCTDFSTP 124

Query: 129 YSSQPQIVCP---PLIWNNNNNNNNYDVNSANSANSSAMYFNGG 170
           +    QI+     P+IW   NNN+NY++N+ N  N+ +MYFNGG
Sbjct: 125 FLPHSQIINTPHHPVIW---NNNSNYNINNHNDINNPSMYFNGG 165

[Close]

BLAST of Sed0013421 vs. NCBI nr
Match: XP_022924080.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata] >KAG6584203.1 Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019799.1 Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 253.1 bits (645), Expect = 1.7e-63
Identity = 126/164 (76.83%), Postives = 138/164 (84.15%), Query Frame = 0


Query: 6   TVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEV 65
           ++ T T+HY SPCAACKFLRRKC  GCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEV
Sbjct: 5   SLATGTNHYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEV 64

Query: 66  LPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLHYCNDF 125
           LPHQR DAVVSLAY+AEARIRDPVYGCV AISFLQKQVQRLQ ELDAAKA L L+ C DF
Sbjct: 65  LPHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDF 124

Query: 126 SGPYSSQPQIVCPPLIWNNNNNNNNYDVNSANSANSSAMYFNGG 170
           S P+S QPQI+ PPL+WN+N      D+ SAN    S++YFNGG
Sbjct: 125 STPFSPQPQIISPPLLWNHN------DIVSAN----SSVYFNGG 158

[Close]

BLAST of Sed0013421 vs. NCBI nr
Match: XP_022954529.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata] >KAG7012263.1 Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 252.3 bits (643), Expect = 3.0e-63
Identity = 130/169 (76.92%), Postives = 141/169 (83.43%), Query Frame = 0


Query: 1   MASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAK 60
           M SSS   T TSHY SPCAAC+FLRRKC  GC++APYFPPE+PQKFANVHKVFGASNVAK
Sbjct: 1   MGSSSR--TETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAK 60

Query: 61  LLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLH 120
           LLNEVLPHQR DAVVSLAYEAEARI+DPVYGCVGAIS LQKQVQRLQKELDAAKA L L 
Sbjct: 61  LLNEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLF 120

Query: 121 YCNDFSGPYSSQPQIVCPPLIWNNNNNNNNYDVNSANSANSSAMYFNGG 170
              DFS P+SSQPQI+ PP+IW    N+NNYD+  AN    S+MYFNGG
Sbjct: 121 SFTDFSAPFSSQPQIISPPMIW----NSNNYDIVYAN----SSMYFNGG 159

[Close]

BLAST of Sed0013421 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.7e-48
Identity = 97/121 (80.17%), Postives = 103/121 (85.12%), Query Frame = 0


Query: 1   MASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAK 60
           MASSS      + Y SPCAACKFLRRKC PGCIFAPYFPPEEP KFANVHK+FGASNV K
Sbjct: 1   MASSS------NSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTK 60

Query: 61  LLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLH 120
           LLNE+LPHQR DAV SLAYEAEAR+RDPVYGCVGAIS+LQ+QV RLQKELDAA A L  H
Sbjct: 61  LLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL-AH 114

Query: 121 Y 122
           Y
Sbjct: 121 Y 114

[Close]

BLAST of Sed0013421 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 170.2 bits (430), Expect = 2.0e-41
Identity = 81/116 (69.83%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 16  SPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQRPDAVV 75
           SPCAACKFLRRKC   C+FAPYFPPEEP KFANVH++FGASNV+K+L+EV PHQR DAV 
Sbjct: 38  SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVN 97

Query: 76  SLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLHYCNDFSGPYSS 132
           SLAYEAEAR++DPVYGCVGAIS LQ+QV RLQ+EL+   A L + Y     G  +S
Sbjct: 98  SLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADL-MRYAGCLGGETTS 152

[Close]

BLAST of Sed0013421 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.1e-39
Identity = 81/115 (70.43%), Postives = 92/115 (80.00%), Query Frame = 0


Query: 1   MASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAK 60
           MASSST         SPCAACKFLRRKC P C+FAPYFPP++PQKFANVHKVFGASNV K
Sbjct: 1   MASSST--------NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTK 60

Query: 61  LLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKA 116
           LLNE+ P QR DAV SLAYEA+ R+RDPVYGCVG IS LQ Q+++LQ +L  AK+
Sbjct: 61  LLNELHPSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKS 107

[Close]

BLAST of Sed0013421 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.0e-37
Identity = 74/113 (65.49%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 2   ASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAKL 61
           +SSS          SPCAACKFLRRKC P C+FAPYFPP+ PQKF +VH+VFGASNV KL
Sbjct: 18  SSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKL 77

Query: 62  LNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAK 115
           LNE+ P QR DAV SLAYEA+ R+RDPVYGCVG IS LQ  +++LQ++L  AK
Sbjct: 78  LNELHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAK 130

[Close]

BLAST of Sed0013421 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.5e-37
Identity = 74/117 (63.25%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 1   MASSSTVVTPTSHYC---SPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASN 60
           +AS+S      +  C   SPCAACKFLRRKC P C+FAPYFPP+ PQKF +VH+VFGASN
Sbjct: 19  IASASASAAANTAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASN 78

Query: 61  VAKLLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAK 115
           V KLLNE+ P+QR DAV SLAYEA+ R+RDPVYGCV  IS LQ+ +++LQ++L  AK
Sbjct: 79  VTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAK 135

[Close]

BLAST of Sed0013421 vs. ExPASy TrEMBL
Match: A0A6J1K206 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita maxima OX=3661 GN=LOC111490317 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.0e-64
Identity = 132/169 (78.11%), Postives = 142/169 (84.02%), Query Frame = 0


Query: 1   MASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAK 60
           M SSS   T TSHY SPCAACKFLRRKC  GC++APYFPPE+PQKFANVHKVFGASNVAK
Sbjct: 1   MGSSSR--TETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAK 60

Query: 61  LLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLH 120
           LLNEVLPHQR DAVVSLAYEAEARI+DPVYGCVGAISFLQKQVQRLQKELDAAKA L L 
Sbjct: 61  LLNEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISFLQKQVQRLQKELDAAKARLRLF 120

Query: 121 YCNDFSGPYSSQPQIVCPPLIWNNNNNNNNYDVNSANSANSSAMYFNGG 170
              DFS P+SSQPQI+ PP+IW    N+NNYD+  AN    S+MYFNGG
Sbjct: 121 SFTDFSAPFSSQPQIISPPMIW----NSNNYDIVYAN----SSMYFNGG 159

[Close]

BLAST of Sed0013421 vs. ExPASy TrEMBL
Match: A0A0A0LTL0 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G046305 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.5e-64
Identity = 126/164 (76.83%), Postives = 139/164 (84.76%), Query Frame = 0


Query: 9   TPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPH 68
           T ++HY SPCAACKFLRRKC  GC+FAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPH
Sbjct: 5   TTSNHYYSPCAACKFLRRKCLAGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPH 64

Query: 69  QRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLHYCNDFSGP 128
           QR DAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKA LFL+ C DFS P
Sbjct: 65  QRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKARLFLYSCTDFSTP 124

Query: 129 YSSQPQIVCP---PLIWNNNNNNNNYDVNSANSANSSAMYFNGG 170
           +    QI+     P+IW   NNN+NY++N+ N  N+ +MYFNGG
Sbjct: 125 FLPHSQIINTPHHPVIW---NNNSNYNINNHNDINNPSMYFNGG 165

[Close]

BLAST of Sed0013421 vs. ExPASy TrEMBL
Match: A0A6J1EDS7 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111431618 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.5e-64
Identity = 126/164 (76.83%), Postives = 138/164 (84.15%), Query Frame = 0


Query: 6   TVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEV 65
           ++ T T+HY SPCAACKFLRRKC  GCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEV
Sbjct: 5   SLATGTNHYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEV 64

Query: 66  LPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLHYCNDF 125
           LPHQR DAVVSLAY+AEARIRDPVYGCV AISFLQKQVQRLQ ELDAAKA L L+ C DF
Sbjct: 65  LPHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDF 124

Query: 126 SGPYSSQPQIVCPPLIWNNNNNNNNYDVNSANSANSSAMYFNGG 170
           S P+S QPQI+ PPL+WN+N      D+ SAN    S++YFNGG
Sbjct: 125 STPFSPQPQIISPPLLWNHN------DIVSAN----SSVYFNGG 158

[Close]

BLAST of Sed0013421 vs. ExPASy TrEMBL
Match: A0A6J1GT86 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111456772 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.4e-63
Identity = 130/169 (76.92%), Postives = 141/169 (83.43%), Query Frame = 0


Query: 1   MASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAK 60
           M SSS   T TSHY SPCAAC+FLRRKC  GC++APYFPPE+PQKFANVHKVFGASNVAK
Sbjct: 1   MGSSSR--TETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAK 60

Query: 61  LLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLH 120
           LLNEVLPHQR DAVVSLAYEAEARI+DPVYGCVGAIS LQKQVQRLQKELDAAKA L L 
Sbjct: 61  LLNEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLF 120

Query: 121 YCNDFSGPYSSQPQIVCPPLIWNNNNNNNNYDVNSANSANSSAMYFNGG 170
              DFS P+SSQPQI+ PP+IW    N+NNYD+  AN    S+MYFNGG
Sbjct: 121 SFTDFSAPFSSQPQIISPPMIW----NSNNYDIVYAN----SSMYFNGG 159

[Close]

BLAST of Sed0013421 vs. ExPASy TrEMBL
Match: A0A6J1KEE2 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita maxima OX=3661 GN=LOC111495065 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.2e-63
Identity = 125/164 (76.22%), Postives = 137/164 (83.54%), Query Frame = 0


Query: 6   TVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEV 65
           ++ T T+HY SPCAACKFLRRKC  GCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEV
Sbjct: 5   SLATGTNHYYSPCAACKFLRRKCISGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEV 64

Query: 66  LPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLHYCNDF 125
           LPHQR DAVVSLAY+AEARIRDPVYGCV AISFLQKQVQRLQ ELDAAKA L L+ C DF
Sbjct: 65  LPHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDF 124

Query: 126 SGPYSSQPQIVCPPLIWNNNNNNNNYDVNSANSANSSAMYFNGG 170
           S P+S Q QI+ PPL+WN+N      D+ SAN    S++YFNGG
Sbjct: 125 STPFSPQSQIISPPLLWNHN------DIVSAN----SSVYFNGG 158

[Close]

BLAST of Sed0013421 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-49
Identity = 97/121 (80.17%), Postives = 103/121 (85.12%), Query Frame = 0


Query: 1   MASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAK 60
           MASSS      + Y SPCAACKFLRRKC PGCIFAPYFPPEEP KFANVHK+FGASNV K
Sbjct: 1   MASSS------NSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTK 60

Query: 61  LLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLH 120
           LLNE+LPHQR DAV SLAYEAEAR+RDPVYGCVGAIS+LQ+QV RLQKELDAA A L  H
Sbjct: 61  LLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL-AH 114

Query: 121 Y 122
           Y
Sbjct: 121 Y 114

[Close]

BLAST of Sed0013421 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-49
Identity = 97/121 (80.17%), Postives = 103/121 (85.12%), Query Frame = 0


Query: 1   MASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAK 60
           MASSS      + Y SPCAACKFLRRKC PGCIFAPYFPPEEP KFANVHK+FGASNV K
Sbjct: 1   MASSS------NSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTK 60

Query: 61  LLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLH 120
           LLNE+LPHQR DAV SLAYEAEAR+RDPVYGCVGAIS+LQ+QV RLQKELDAA A L  H
Sbjct: 61  LLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL-AH 114

Query: 121 Y 122
           Y
Sbjct: 121 Y 114

[Close]

BLAST of Sed0013421 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-49
Identity = 97/121 (80.17%), Postives = 103/121 (85.12%), Query Frame = 0


Query: 1   MASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAK 60
           MASSS      + Y SPCAACKFLRRKC PGCIFAPYFPPEEP KFANVHK+FGASNV K
Sbjct: 1   MASSS------NSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTK 60

Query: 61  LLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLH 120
           LLNE+LPHQR DAV SLAYEAEAR+RDPVYGCVGAIS+LQ+QV RLQKELDAA A L  H
Sbjct: 61  LLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL-AH 114

Query: 121 Y 122
           Y
Sbjct: 121 Y 114

[Close]

BLAST of Sed0013421 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-49
Identity = 97/121 (80.17%), Postives = 103/121 (85.12%), Query Frame = 0


Query: 1   MASSSTVVTPTSHYCSPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAK 60
           MASSS      + Y SPCAACKFLRRKC PGCIFAPYFPPEEP KFANVHK+FGASNV K
Sbjct: 1   MASSS------NSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTK 60

Query: 61  LLNEVLPHQRPDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLH 120
           LLNE+LPHQR DAV SLAYEAEAR+RDPVYGCVGAIS+LQ+QV RLQKELDAA A L  H
Sbjct: 61  LLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL-AH 114

Query: 121 Y 122
           Y
Sbjct: 121 Y 114

[Close]

BLAST of Sed0013421 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 170.2 bits (430), Expect = 1.4e-42
Identity = 81/116 (69.83%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 16  SPCAACKFLRRKCAPGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQRPDAVV 75
           SPCAACKFLRRKC   C+FAPYFPPEEP KFANVH++FGASNV+K+L+EV PHQR DAV 
Sbjct: 38  SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVN 97

Query: 76  SLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLHYCNDFSGPYSS 132
           SLAYEAEAR++DPVYGCVGAIS LQ+QV RLQ+EL+   A L + Y     G  +S
Sbjct: 98  SLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADL-MRYAGCLGGETTS 152

The following BLAST results are available for this feature:

BLAST of Sed0013421 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022994675.1	2.1e-64	78.11	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita maxima]	[more]
XP_023542328.1	1.3e-63	77.51	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo]	[more]
KGN64334.1	1.3e-63	76.83	hypothetical protein Csa_013854 [Cucumis sativus]	[more]
XP_022924080.1	1.7e-63	76.83	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata] >KAG6584203.1 Protein...	[more]
XP_022954529.1	3.0e-63	76.92	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata] >KAG7012263.1 Protein...	[more]

BLAST of Sed0013421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FML4	3.7e-48	80.17	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
Q8L8Q3	2.0e-41	69.83	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
O04479	3.1e-39	70.43	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	5.0e-37	65.49	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
A2WXT0	8.5e-37	63.25	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]

BLAST of Sed0013421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K206	1.0e-64	78.11	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita maxima OX=3661 GN=LOC11149031...	[more]
A0A0A0LTL0	6.5e-64	76.83	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G046305 PE=3 SV...	[more]
A0A6J1EDS7	8.5e-64	76.83	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111431...	[more]
A0A6J1GT86	1.4e-63	76.92	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111456...	[more]
A0A6J1KEE2	7.2e-63	76.22	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita maxima OX=3661 GN=LOC11149506...	[more]

BLAST of Sed0013421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63090.2	2.6e-49	80.17	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	2.6e-49	80.17	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	2.6e-49	80.17	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	2.6e-49	80.17	Lateral organ boundaries (LOB) domain family protein	[more]
AT3G27650.1	1.4e-42	69.83	LOB domain-containing protein 25	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 96..116
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 12..149
None	No IPR available	PANTHER	PTHR31301:SF91	PROTEIN LATERAL ORGAN BOUNDARIES	coord: 12..149
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 17..114 e-value: 2.1E-42 score: 143.7
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 16..117 score: 27.09691

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013421.1	Sed0013421.1	mRNA