Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTCATAGCATAAGCCCTCTTCTGTGCTTTCCTATAAAAATAACCCTAAACACTCACATATCGTTCATCATCCGAGTTTTAGTTATCGCATTTGACTTTGTCTATTTCTTTCCTACAAAAAAAACAAACACTTATTATTTTCTTACTTTCGTAATGGCTGGTCGTTTTGGTCGTTCGATGTACCGTTTTTCTTCCGTTAACCGACCCGTTGCCCCTGGCGGCAATACTTCAAGCCAAGATTCGGCTCAATATGATCGTCGGCGATATCCTTCTGCCAATAAAGAGGCCTCGTTCGAACCTCGCTCGCCACCACTTTCACCGAAGAGAGGATCGTTACCTGTGTCTCCAACATATTCTGTCAAGAAGATTGCTTCACCGCCTTCATCTCCGTCGTATAGAGCTTCAACTGCACGGGTTGTTAACTCGCCGCCATTGAAGTCGGTAGATGAATACCCTAAGAAAAATCCTACCATTCAACCCAGGTTGGTCAAATTAACACTACAAAGCTTAAAATGTTTGTTCAATTTTTCTTGTAAAGGATACTTCATTAAAGAAACATAGGTAGCATACTTTTCAAAAAAAAGAAAAGAAACGTAGGTAACATAATTATAAATTTGAATTTAGGGAGCTTATAAATGATCTCCCATTTAAAGTTATGGAACAAAAGATTATAGTATTTGACTGTAAAAAAAATTCGTAAAAGATTAATTCTTAAATACGTGATCATCATAGATTGAGCAAGAAACGTGTAATTTTCCATTAAGCCTAACTTTCTACAGCAACAATAAAAATAGCATCTTCCAACCGCCATCGGATTCTTAAAACATTTGTTCTATTGTCTTCAAAAAATTATTTAAAGGTATAACTTTCTTAAATAGTCTTGCTTATTTTCTTTGATATATTATATTCTTTTTTTTTTATCTTTCCCCATAACAGATTCAAATTCTTAGTTAAATTTTTAAAAACATTGGCTTAAATTTTGTGTTTAGAAAGGTGCATACTTAGATAGCAAAATTAAAGGAAACATGAACGTACGTAAGTAACGTATAAAAGATTTAATTCTTGACAGGGTGAAGGTTGGAATCTTCTATCTCCAAATGTTACGTTTAAATAATGACTTTAAATTAGATAGGTTATGCATTTATATGGTAGGAATTAGAGAGAATATGAGGTTCCACCTCAAAATCAATTACCAATAAGTGGAGTAACTCATATCTCTTTTATATTGATGTTGGACTCCCAACTTTTTCAATGTGGGACAATTGAGATCTCAACATACCCTTTCAAGATAATGTCTCTTTTGGGCTCACCAATCTTGAATCATATCTCAATTTTATTCTTATTTAGACCGATACCCATTAGAGAGAATATAAAGTTCTACTTCAAAACCAATTGACAATCAGGCTAGTTATATTGTTTACTCACTTTTTTTTTTTTTTTGGGAAACTTGTTTACTCACTATTTAACTATGAATTAATTTAAGTTGGCTGACAGATTATGGTATGTTTGTTTTTAATTCACGCTCTTAACACAGATCACCCATAGCCGAGCCTAAGTCGATGGTCTACAAAGCCATGGAGAAGTTGACGAAGTCGGACCGACATGTCGAGTCGGGAAAAACGACGGCGTCTTCCCACAAGCAACCGCCGAATGCCATAAACATTGCAGGGGAAAATGTTGGGGCAGTAATGGAAATCGTTGAGTCAAAACAACAAGGTGGACATATCATAAAGAAGGATAAAAAAACTGAAGAAAATTCAAAGGGCCAAAAAGCACTTAATTCAGTGCCAGCAACCACTTTTTTGAACACCAATTTTCAGACCGTAAACAATTCCCTTATTTTCGAGGCTTCTTTGGGTCACCGTGACCCCGGTTTGCACCTTGCTTTCTCCCGGAACCCGACCAGTGACCGGTTCACTAAGGATGACAAGAAGAAACAACACGAGAAATACTAGACAAGGAAGAAAGAGAAATTAATGCTGGATAATTAATATATAATACCAGAAAATATATTATTATTATTATTATTATTATGAGAATAAAATGAGACGGTTTATGGTTTGAGTTTTAGTGGTTTCATTGGCCATTAATTTATTTCTGTTTGAATAACATAAGTTTGAGCCGGTTTCTATTGGTTTCTGTTTTCTCATGCATTTTGTGGCCAAAATCAATTTTAAGTGAATTCTTGC
mRNA sequence
GCCTCATAGCATAAGCCCTCTTCTGTGCTTTCCTATAAAAATAACCCTAAACACTCACATATCGTTCATCATCCGAGTTTTAGTTATCGCATTTGACTTTGTCTATTTCTTTCCTACAAAAAAAACAAACACTTATTATTTTCTTACTTTCGTAATGGCTGGTCGTTTTGGTCGTTCGATGTACCGTTTTTCTTCCGTTAACCGACCCGTTGCCCCTGGCGGCAATACTTCAAGCCAAGATTCGGCTCAATATGATCGTCGGCGATATCCTTCTGCCAATAAAGAGGCCTCGTTCGAACCTCGCTCGCCACCACTTTCACCGAAGAGAGGATCGTTACCTGTGTCTCCAACATATTCTGTCAAGAAGATTGCTTCACCGCCTTCATCTCCGTCGTATAGAGCTTCAACTGCACGGGTTGTTAACTCGCCGCCATTGAAGTCGGTAGATGAATACCCTAAGAAAAATCCTACCATTCAACCCAGATCACCCATAGCCGAGCCTAAGTCGATGGTCTACAAAGCCATGGAGAAGTTGACGAAGTCGGACCGACATGTCGAGTCGGGAAAAACGACGGCGTCTTCCCACAAGCAACCGCCGAATGCCATAAACATTGCAGGGGAAAATGTTGGGGCAGTAATGGAAATCGTTGAGTCAAAACAACAAGGTGGACATATCATAAAGAAGGATAAAAAAACTGAAGAAAATTCAAAGGGCCAAAAAGCACTTAATTCAGTGCCAGCAACCACTTTTTTGAACACCAATTTTCAGACCGTAAACAATTCCCTTATTTTCGAGGCTTCTTTGGGTCACCGTGACCCCGGTTTGCACCTTGCTTTCTCCCGGAACCCGACCAGTGACCGGTTCACTAAGGATGACAAGAAGAAACAACACGAGAAATACTAGACAAGGAAGAAAGAGAAATTAATGCTGGATAATTAATATATAATACCAGAAAATATATTATTATTATTATTATTATTATGAGAATAAAATGAGACGGTTTATGGTTTGAGTTTTAGTGGTTTCATTGGCCATTAATTTATTTCTGTTTGAATAACATAAGTTTGAGCCGGTTTCTATTGGTTTCTGTTTTCTCATGCATTTTGTGGCCAAAATCAATTTTAAGTGAATTCTTGC
Coding sequence (CDS)
ATGGCTGGTCGTTTTGGTCGTTCGATGTACCGTTTTTCTTCCGTTAACCGACCCGTTGCCCCTGGCGGCAATACTTCAAGCCAAGATTCGGCTCAATATGATCGTCGGCGATATCCTTCTGCCAATAAAGAGGCCTCGTTCGAACCTCGCTCGCCACCACTTTCACCGAAGAGAGGATCGTTACCTGTGTCTCCAACATATTCTGTCAAGAAGATTGCTTCACCGCCTTCATCTCCGTCGTATAGAGCTTCAACTGCACGGGTTGTTAACTCGCCGCCATTGAAGTCGGTAGATGAATACCCTAAGAAAAATCCTACCATTCAACCCAGATCACCCATAGCCGAGCCTAAGTCGATGGTCTACAAAGCCATGGAGAAGTTGACGAAGTCGGACCGACATGTCGAGTCGGGAAAAACGACGGCGTCTTCCCACAAGCAACCGCCGAATGCCATAAACATTGCAGGGGAAAATGTTGGGGCAGTAATGGAAATCGTTGAGTCAAAACAACAAGGTGGACATATCATAAAGAAGGATAAAAAAACTGAAGAAAATTCAAAGGGCCAAAAAGCACTTAATTCAGTGCCAGCAACCACTTTTTTGAACACCAATTTTCAGACCGTAAACAATTCCCTTATTTTCGAGGCTTCTTTGGGTCACCGTGACCCCGGTTTGCACCTTGCTTTCTCCCGGAACCCGACCAGTGACCGGTTCACTAAGGATGACAAGAAGAAACAACACGAGAAATACTAG
Protein sequence
MAGRFGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEPRSPPLSPKRGSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAEPKSMVYKAMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVESKQQGGHIIKKDKKTEENSKGQKALNSVPATTFLNTNFQTVNNSLIFEASLGHRDPGLHLAFSRNPTSDRFTKDDKKKQHEKY
Homology
BLAST of Sed0013414 vs. NCBI nr
Match:
XP_022147459.1 (serine/arginine repetitive matrix protein 1-like [Momordica charantia])
HSP 1 Score: 300.8 bits (769), Expect = 1.1e-77
Identity = 173/273 (63.37%), Postives = 208/273 (76.19%), Query Frame = 0
Query: 1 MAGRFGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEP--RSPPLSPKR 60
MAGR+GRS YRFSSVNRP+APGGNTS+QDSAQYD R+YPSA +++S EP RSPP SP+R
Sbjct: 1 MAGRYGRSFYRFSSVNRPLAPGGNTSAQDSAQYDGRQYPSATRDSSVEPRARSPPFSPRR 60
Query: 61 GSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAEPKS 120
S P SPTYSVKK ASPPSSP YRA AR V+SPP + VDEYPK PT QPRSP A+ K
Sbjct: 61 ESYPASPTYSVKKAASPPSSPPYRAPAARTVSSPP-RLVDEYPKYKPTTQPRSPEADQKP 120
Query: 121 MVYKAMEK-LTKSDRHVESGKTTAS--SHKQPPNAINIAGENVGAVMEIVES-KQQGGHI 180
++YKA+EK TKSDR+ E+GKTT+S +Q PNAINI+GEN+GAVMEIV+S K++GGHI
Sbjct: 121 VIYKAIEKATTKSDRYPETGKTTSSQKQQQQKPNAINISGENLGAVMEIVQSPKREGGHI 180
Query: 181 IKK----------DKKTEENSKGQK--------ALNSVPATTFLNTNFQTVNNSLIFEAS 240
I+K + + E+SK QK + +S+PA TFLN+NFQ+VNNSL++ AS
Sbjct: 181 IRKKESRGSTLHSNDQNNEHSKDQKGKEATSSSSSSSLPANTFLNSNFQSVNNSLLYNAS 240
Query: 241 LGHRDPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
L HRDPGLHLAF+RNP DRF DD KK H KY
Sbjct: 241 LAHRDPGLHLAFARNPAGDRFAADD-KKHHPKY 271
BLAST of Sed0013414 vs. NCBI nr
Match:
XP_038879892.1 (uncharacterized protein At1g10890-like isoform X1 [Benincasa hispida])
HSP 1 Score: 268.9 bits (686), Expect = 4.5e-68
Identity = 161/269 (59.85%), Postives = 192/269 (71.38%), Query Frame = 0
Query: 1 MAGR-FGRSMYRFSSVNRPVAP-GGNTSSQDSAQYDRRRYPSANKEASFEPRS---PPLS 60
MAGR FGR +YRFSS NRP+AP NTS QDSAQYD R+Y SA ++ S EPR+ PPLS
Sbjct: 1 MAGRNFGR-LYRFSSANRPLAPSAANTSGQDSAQYDGRQYRSATRDTSLEPRARSPPPLS 60
Query: 61 PKRGS-LPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIA 120
P+R LP SPTYS+KK SPP SP YRA ARV++SPP K+VDEY K PT QPRSP A
Sbjct: 61 PRRDQPLPASPTYSIKKATSPPPSPPYRAPAARVISSPP-KTVDEYSKYKPTTQPRSPEA 120
Query: 121 EPKSMVYKAMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVE-SKQQG-G 180
+ K + K ++K+TKSDRH ES KT +S Q PNAINI G+NVGAVMEIVE SK++G G
Sbjct: 121 KQKPAIQKTVDKVTKSDRHHESSKTVSSHKVQQPNAINIKGDNVGAVMEIVESSKREGAG 180
Query: 181 HIIKKDKKTEE------------NSKGQKALNSVPATTFLNTNFQTVNNSLIFEASLGHR 240
H+IKK + E N + +S+P +TFLN+NFQ+VNNSL+F A+L HR
Sbjct: 181 HVIKKKETARELLNKDNFANDQYNEASKTPNSSMPKSTFLNSNFQSVNNSLLFNATLAHR 240
Query: 241 DPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
DPGLHLAFS NPT DR T DDKK+ H KY
Sbjct: 241 DPGLHLAFSLNPTGDRLTVDDKKQHHTKY 267
BLAST of Sed0013414 vs. NCBI nr
Match:
XP_008437848.1 (PREDICTED: uncharacterized protein LOC103483156 [Cucumis melo] >KAA0048861.1 zyxin-like [Cucumis melo var. makuwa] >TYK20813.1 zyxin-like [Cucumis melo var. makuwa])
HSP 1 Score: 268.1 bits (684), Expect = 7.7e-68
Identity = 160/270 (59.26%), Postives = 191/270 (70.74%), Query Frame = 0
Query: 1 MAGR-FGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEPRSPP----LS 60
MAGR FGR MYRFSS NRP+AP NTS QDSAQYDRR+YPSA ++ S EPRS P L
Sbjct: 1 MAGRNFGR-MYRFSSANRPLAPATNTSGQDSAQYDRRQYPSATRDTSLEPRSSPPRISLR 60
Query: 61 PKRGSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAE 120
LP SPTYS+KK SPPSSP YR AR ++SPP K VDEYPK P QPRSP A+
Sbjct: 61 KDDPPLPASPTYSIKKATSPPSSPPYRGMAAREISSPP-KMVDEYPKYKPITQPRSPEAK 120
Query: 121 PKSMVYK--AMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVE-SKQQGG 180
K ++K +EK+TKSDR+ E K +S Q PNAINI GENVGAVMEIVE SK++GG
Sbjct: 121 QKPGIHKTTTVEKVTKSDRYHEPSKAVSSHKGQQPNAINIKGENVGAVMEIVESSKREGG 180
Query: 181 HIIKKDKKT------------EENSKGQKALN-SVPATTFLNTNFQTVNNSLIFEASLGH 240
H+IKK K+T ++N++ K N S+P TFLN+NFQ+VNNSL++ A+L +
Sbjct: 181 HMIKKIKETARGILNNNDMANDQNNEASKTTNSSMPTNTFLNSNFQSVNNSLLYNANLTY 240
Query: 241 RDPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
RDPGLHL+FSRNPT DRF DDKK+ H KY
Sbjct: 241 RDPGLHLSFSRNPTGDRFPVDDKKQHHTKY 268
BLAST of Sed0013414 vs. NCBI nr
Match:
XP_004133795.1 (DNA-directed RNA polymerase II subunit RPB1 [Cucumis sativus] >KGN56393.1 hypothetical protein Csa_011382 [Cucumis sativus])
HSP 1 Score: 258.5 bits (659), Expect = 6.1e-65
Identity = 162/269 (60.22%), Postives = 192/269 (71.38%), Query Frame = 0
Query: 1 MAGR-FGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEPRSPP----LS 60
MAGR FGR +YRFSS NRP+AP NTS QDSAQYD RRYPS+ ++ S EPRS P L
Sbjct: 1 MAGRNFGR-LYRFSSANRPLAPVTNTSGQDSAQYDGRRYPSSARDTSLEPRSSPPRVALR 60
Query: 61 PKRGSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAE 120
LP SPTYS+KK SPPSSPSYRA AR ++S P K+VDEYPK P QPRSP A+
Sbjct: 61 RDDQPLPASPTYSIKKATSPPSSPSYRAPAARGISS-PTKTVDEYPKYKPNTQPRSPEAK 120
Query: 121 PKSMVY--KAMEKLTKSDRHVESGKTTASSHK--QPPNAINIAGENVGAVMEIVE-SKQQ 180
K ++ +EK+TKSDR+ ES K T SSHK PNAINI GENVGAVMEIVE SK++
Sbjct: 121 QKPGIFHKSTVEKVTKSDRYHESSK-TLSSHKGQLQPNAINIKGENVGAVMEIVESSKRE 180
Query: 181 GGHIIKKDKKT------------EENSKGQKALN-SVPATTFLNTNFQTVNNSLIFEASL 240
GGH+IKK K+T ++N++ KA N S+P TFLN+NFQ+VNNSL++ A+L
Sbjct: 181 GGHMIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANL 240
Query: 241 GHRDPGLHLAFSRNPTSDRFTKDDKKKQH 247
HRDPGLHLAFSRNPT +R DD KKQH
Sbjct: 241 THRDPGLHLAFSRNPTGERSGVDDHKKQH 266
BLAST of Sed0013414 vs. NCBI nr
Match:
XP_038879901.1 (uncharacterized protein LOC120071611 isoform X2 [Benincasa hispida])
HSP 1 Score: 252.7 bits (644), Expect = 3.3e-63
Identity = 156/269 (57.99%), Postives = 187/269 (69.52%), Query Frame = 0
Query: 1 MAGR-FGRSMYRFSSVNRPVAP-GGNTSSQDSAQYDRRRYPSANKEASFEPRS---PPLS 60
MAGR FGR +YRFSS NRP+AP NTS QDSAQYD R+Y SA ++ S EPR+ PPLS
Sbjct: 1 MAGRNFGR-LYRFSSANRPLAPSAANTSGQDSAQYDGRQYRSATRDTSLEPRARSPPPLS 60
Query: 61 PKRGS-LPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIA 120
P+R LP SPTYS+KK SPP SP YRA ARV++SPP K+VDEY K SP A
Sbjct: 61 PRRDQPLPASPTYSIKKATSPPPSPPYRAPAARVISSPP-KTVDEYSK--------SPEA 120
Query: 121 EPKSMVYKAMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVE-SKQQG-G 180
+ K + K ++K+TKSDRH ES KT +S Q PNAINI G+NVGAVMEIVE SK++G G
Sbjct: 121 KQKPAIQKTVDKVTKSDRHHESSKTVSSHKVQQPNAINIKGDNVGAVMEIVESSKREGAG 180
Query: 181 HIIKKDKKTEE------------NSKGQKALNSVPATTFLNTNFQTVNNSLIFEASLGHR 240
H+IKK + E N + +S+P +TFLN+NFQ+VNNSL+F A+L HR
Sbjct: 181 HVIKKKETARELLNKDNFANDQYNEASKTPNSSMPKSTFLNSNFQSVNNSLLFNATLAHR 240
Query: 241 DPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
DPGLHLAFS NPT DR T DDKK+ H KY
Sbjct: 241 DPGLHLAFSLNPTGDRLTVDDKKQHHTKY 259
BLAST of Sed0013414 vs. ExPASy TrEMBL
Match:
A0A6J1D126 (serine/arginine repetitive matrix protein 1-like OS=Momordica charantia OX=3673 GN=LOC111016379 PE=4 SV=1)
HSP 1 Score: 300.8 bits (769), Expect = 5.2e-78
Identity = 173/273 (63.37%), Postives = 208/273 (76.19%), Query Frame = 0
Query: 1 MAGRFGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEP--RSPPLSPKR 60
MAGR+GRS YRFSSVNRP+APGGNTS+QDSAQYD R+YPSA +++S EP RSPP SP+R
Sbjct: 1 MAGRYGRSFYRFSSVNRPLAPGGNTSAQDSAQYDGRQYPSATRDSSVEPRARSPPFSPRR 60
Query: 61 GSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAEPKS 120
S P SPTYSVKK ASPPSSP YRA AR V+SPP + VDEYPK PT QPRSP A+ K
Sbjct: 61 ESYPASPTYSVKKAASPPSSPPYRAPAARTVSSPP-RLVDEYPKYKPTTQPRSPEADQKP 120
Query: 121 MVYKAMEK-LTKSDRHVESGKTTAS--SHKQPPNAINIAGENVGAVMEIVES-KQQGGHI 180
++YKA+EK TKSDR+ E+GKTT+S +Q PNAINI+GEN+GAVMEIV+S K++GGHI
Sbjct: 121 VIYKAIEKATTKSDRYPETGKTTSSQKQQQQKPNAINISGENLGAVMEIVQSPKREGGHI 180
Query: 181 IKK----------DKKTEENSKGQK--------ALNSVPATTFLNTNFQTVNNSLIFEAS 240
I+K + + E+SK QK + +S+PA TFLN+NFQ+VNNSL++ AS
Sbjct: 181 IRKKESRGSTLHSNDQNNEHSKDQKGKEATSSSSSSSLPANTFLNSNFQSVNNSLLYNAS 240
Query: 241 LGHRDPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
L HRDPGLHLAF+RNP DRF DD KK H KY
Sbjct: 241 LAHRDPGLHLAFARNPAGDRFAADD-KKHHPKY 271
BLAST of Sed0013414 vs. ExPASy TrEMBL
Match:
A0A5A7U5I8 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00740 PE=4 SV=1)
HSP 1 Score: 268.1 bits (684), Expect = 3.7e-68
Identity = 160/270 (59.26%), Postives = 191/270 (70.74%), Query Frame = 0
Query: 1 MAGR-FGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEPRSPP----LS 60
MAGR FGR MYRFSS NRP+AP NTS QDSAQYDRR+YPSA ++ S EPRS P L
Sbjct: 1 MAGRNFGR-MYRFSSANRPLAPATNTSGQDSAQYDRRQYPSATRDTSLEPRSSPPRISLR 60
Query: 61 PKRGSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAE 120
LP SPTYS+KK SPPSSP YR AR ++SPP K VDEYPK P QPRSP A+
Sbjct: 61 KDDPPLPASPTYSIKKATSPPSSPPYRGMAAREISSPP-KMVDEYPKYKPITQPRSPEAK 120
Query: 121 PKSMVYK--AMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVE-SKQQGG 180
K ++K +EK+TKSDR+ E K +S Q PNAINI GENVGAVMEIVE SK++GG
Sbjct: 121 QKPGIHKTTTVEKVTKSDRYHEPSKAVSSHKGQQPNAINIKGENVGAVMEIVESSKREGG 180
Query: 181 HIIKKDKKT------------EENSKGQKALN-SVPATTFLNTNFQTVNNSLIFEASLGH 240
H+IKK K+T ++N++ K N S+P TFLN+NFQ+VNNSL++ A+L +
Sbjct: 181 HMIKKIKETARGILNNNDMANDQNNEASKTTNSSMPTNTFLNSNFQSVNNSLLYNANLTY 240
Query: 241 RDPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
RDPGLHL+FSRNPT DRF DDKK+ H KY
Sbjct: 241 RDPGLHLSFSRNPTGDRFPVDDKKQHHTKY 268
BLAST of Sed0013414 vs. ExPASy TrEMBL
Match:
A0A1S3AVL1 (uncharacterized protein LOC103483156 OS=Cucumis melo OX=3656 GN=LOC103483156 PE=4 SV=1)
HSP 1 Score: 268.1 bits (684), Expect = 3.7e-68
Identity = 160/270 (59.26%), Postives = 191/270 (70.74%), Query Frame = 0
Query: 1 MAGR-FGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEPRSPP----LS 60
MAGR FGR MYRFSS NRP+AP NTS QDSAQYDRR+YPSA ++ S EPRS P L
Sbjct: 1 MAGRNFGR-MYRFSSANRPLAPATNTSGQDSAQYDRRQYPSATRDTSLEPRSSPPRISLR 60
Query: 61 PKRGSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAE 120
LP SPTYS+KK SPPSSP YR AR ++SPP K VDEYPK P QPRSP A+
Sbjct: 61 KDDPPLPASPTYSIKKATSPPSSPPYRGMAAREISSPP-KMVDEYPKYKPITQPRSPEAK 120
Query: 121 PKSMVYK--AMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVE-SKQQGG 180
K ++K +EK+TKSDR+ E K +S Q PNAINI GENVGAVMEIVE SK++GG
Sbjct: 121 QKPGIHKTTTVEKVTKSDRYHEPSKAVSSHKGQQPNAINIKGENVGAVMEIVESSKREGG 180
Query: 181 HIIKKDKKT------------EENSKGQKALN-SVPATTFLNTNFQTVNNSLIFEASLGH 240
H+IKK K+T ++N++ K N S+P TFLN+NFQ+VNNSL++ A+L +
Sbjct: 181 HMIKKIKETARGILNNNDMANDQNNEASKTTNSSMPTNTFLNSNFQSVNNSLLYNANLTY 240
Query: 241 RDPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
RDPGLHL+FSRNPT DRF DDKK+ H KY
Sbjct: 241 RDPGLHLSFSRNPTGDRFPVDDKKQHHTKY 268
BLAST of Sed0013414 vs. ExPASy TrEMBL
Match:
A0A0A0L3R5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1)
HSP 1 Score: 258.5 bits (659), Expect = 3.0e-65
Identity = 162/269 (60.22%), Postives = 192/269 (71.38%), Query Frame = 0
Query: 1 MAGR-FGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEPRSPP----LS 60
MAGR FGR +YRFSS NRP+AP NTS QDSAQYD RRYPS+ ++ S EPRS P L
Sbjct: 1 MAGRNFGR-LYRFSSANRPLAPVTNTSGQDSAQYDGRRYPSSARDTSLEPRSSPPRVALR 60
Query: 61 PKRGSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAE 120
LP SPTYS+KK SPPSSPSYRA AR ++S P K+VDEYPK P QPRSP A+
Sbjct: 61 RDDQPLPASPTYSIKKATSPPSSPSYRAPAARGISS-PTKTVDEYPKYKPNTQPRSPEAK 120
Query: 121 PKSMVY--KAMEKLTKSDRHVESGKTTASSHK--QPPNAINIAGENVGAVMEIVE-SKQQ 180
K ++ +EK+TKSDR+ ES K T SSHK PNAINI GENVGAVMEIVE SK++
Sbjct: 121 QKPGIFHKSTVEKVTKSDRYHESSK-TLSSHKGQLQPNAINIKGENVGAVMEIVESSKRE 180
Query: 181 GGHIIKKDKKT------------EENSKGQKALN-SVPATTFLNTNFQTVNNSLIFEASL 240
GGH+IKK K+T ++N++ KA N S+P TFLN+NFQ+VNNSL++ A+L
Sbjct: 181 GGHMIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANL 240
Query: 241 GHRDPGLHLAFSRNPTSDRFTKDDKKKQH 247
HRDPGLHLAFSRNPT +R DD KKQH
Sbjct: 241 THRDPGLHLAFSRNPTGERSGVDDHKKQH 266
BLAST of Sed0013414 vs. ExPASy TrEMBL
Match:
A0A6J1G1N7 (uncharacterized protein LOC111449843 OS=Cucurbita moschata OX=3662 GN=LOC111449843 PE=4 SV=1)
HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 133/243 (54.73%), Postives = 161/243 (66.26%), Query Frame = 0
Query: 1 MAGRFGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEP--RSPPLSPKR 60
MAGR RSM+R SS RP GG+ S QDS QYD RYPS KE+S EP RSP LSPKR
Sbjct: 1 MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYD-GRYPSTRKESSMEPRARSPSLSPKR 60
Query: 61 GSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAEPKS 120
S+ SPTYSVKK+ASP SPSY S+ V++S P K+VDE K PT QPRSP EPK+
Sbjct: 61 ESVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQP-KAVDEDLKDKPTTQPRSPETEPKA 120
Query: 121 MVYKAMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVESKQQGGHIIKKD 180
+V KA +K+T SDR +ES KTT +SHK PN I IAGEN GAVMEI E K + G +I+K
Sbjct: 121 VVGKATKKVTDSDRRIESSKTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEEGDMIEKK 180
Query: 181 ---------KKTEENSKGQKALNSVPATTFLNTNFQTVNNSLIFEASLGHRDPGLHLAFS 233
K ++N +G K + +T+LN+N Q VNNS+++ ASL H DPGLH A S
Sbjct: 181 ERFRRTLNRKAKDQNKEGCK--DQKGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALS 239
BLAST of Sed0013414 vs. TAIR 10
Match:
AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). )
HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08
Identity = 74/307 (24.10%), Postives = 117/307 (38.11%), Query Frame = 0
Query: 17 RPVAPGGNTSSQDSAQYDRRRY---PSANKEASFEPR--SPPLSPKRGSLPVSPTYSVKK 76
+P+ P + S +R Y PS + P+ +PP P R S P+ +
Sbjct: 72 QPLTPPRQKAPPTSPPQERSPYHSPPSRHMSPPTPPKAATPPPPPPRSSYTSPPSPKEVQ 131
Query: 77 IASP---PSSPSYRASTARVVNSPPLK----SVDEYPKKNPTIQPRSPIAEPKSMVYKAM 136
A P P+SP A ++R S +K S E +K P+ + SP + P S+++
Sbjct: 132 EALPPRKPNSPPSPAHSSRSTTSESVKTRSPSESENHRKAPSPRVLSPYSLPASLLHSER 191
Query: 137 EKLTKSDRHVE-------------------------------------SGKTTASSHKQP 196
E K+ E G H+QP
Sbjct: 192 ETTQKNILTAEKTSQTHETNHHNQNHNHDYNQNHNYNQNHSYNQNQNHQGNNPKKMHRQP 251
Query: 197 PNA----------INIAGENVGAVMEIVESKQ--------------------QGGHIIKK 236
++ I IAGEN GAVMEI+ S Q +G +
Sbjct: 252 SSSDSENIMSTRVITIAGENKGAVMEILRSPQGNKTGGSGTHSSRVSHGTGEKGRRLQSS 311
BLAST of Sed0013414 vs. TAIR 10
Match:
AT1G75260.1 (oxidoreductases, acting on NADH or NADPH )
HSP 1 Score: 43.9 bits (102), Expect = 2.2e-04
Identity = 34/125 (27.20%), Postives = 55/125 (44.00%), Query Frame = 0
Query: 118 SMVYKAMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVESKQ-------- 177
SM K E + + GK+ + + + GEN GA M I K
Sbjct: 315 SMSRKIKEDIRDGISKLTWGKSNGDD--KSVSVYTLTGENKGATMGIGSEKDKKDGEVHI 374
Query: 178 QGGHIIKKDKKTE------ENSKGQKALNSVPATTFLNTNFQTVNNSLIFEASLGHRDPG 229
+ G+ D+ + EN K +A T ++N N Q +NNS++ E+S+ DPG
Sbjct: 375 RRGYRSNPDESSNTTATETENPKDDEAEEEASFTAYINGNTQGINNSIVVESSVSENDPG 434
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022147459.1 | 1.1e-77 | 63.37 | serine/arginine repetitive matrix protein 1-like [Momordica charantia] | [more] |
XP_038879892.1 | 4.5e-68 | 59.85 | uncharacterized protein At1g10890-like isoform X1 [Benincasa hispida] | [more] |
XP_008437848.1 | 7.7e-68 | 59.26 | PREDICTED: uncharacterized protein LOC103483156 [Cucumis melo] >KAA0048861.1 zyx... | [more] |
XP_004133795.1 | 6.1e-65 | 60.22 | DNA-directed RNA polymerase II subunit RPB1 [Cucumis sativus] >KGN56393.1 hypoth... | [more] |
XP_038879901.1 | 3.3e-63 | 57.99 | uncharacterized protein LOC120071611 isoform X2 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1D126 | 5.2e-78 | 63.37 | serine/arginine repetitive matrix protein 1-like OS=Momordica charantia OX=3673 ... | [more] |
A0A5A7U5I8 | 3.7e-68 | 59.26 | Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00740 PE=... | [more] |
A0A1S3AVL1 | 3.7e-68 | 59.26 | uncharacterized protein LOC103483156 OS=Cucumis melo OX=3656 GN=LOC103483156 PE=... | [more] |
A0A0A0L3R5 | 3.0e-65 | 60.22 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1 | [more] |
A0A6J1G1N7 | 1.1e-51 | 54.73 | uncharacterized protein LOC111449843 OS=Cucurbita moschata OX=3662 GN=LOC1114498... | [more] |
Match Name | E-value | Identity | Description | |
AT2G46630.1 | 1.1e-08 | 24.10 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXP... | [more] |
AT1G75260.1 | 2.2e-04 | 27.20 | oxidoreductases, acting on NADH or NADPH | [more] |