Sed0013414 (gene) Chayote v1

Overview
NameSed0013414
Typegene
OrganismSechium edule (Chayote v1)
DescriptionZyxin-like
LocationLG12: 394874 .. 397063 (+)
RNA-Seq ExpressionSed0013414
SyntenySed0013414
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTCATAGCATAAGCCCTCTTCTGTGCTTTCCTATAAAAATAACCCTAAACACTCACATATCGTTCATCATCCGAGTTTTAGTTATCGCATTTGACTTTGTCTATTTCTTTCCTACAAAAAAAACAAACACTTATTATTTTCTTACTTTCGTAATGGCTGGTCGTTTTGGTCGTTCGATGTACCGTTTTTCTTCCGTTAACCGACCCGTTGCCCCTGGCGGCAATACTTCAAGCCAAGATTCGGCTCAATATGATCGTCGGCGATATCCTTCTGCCAATAAAGAGGCCTCGTTCGAACCTCGCTCGCCACCACTTTCACCGAAGAGAGGATCGTTACCTGTGTCTCCAACATATTCTGTCAAGAAGATTGCTTCACCGCCTTCATCTCCGTCGTATAGAGCTTCAACTGCACGGGTTGTTAACTCGCCGCCATTGAAGTCGGTAGATGAATACCCTAAGAAAAATCCTACCATTCAACCCAGGTTGGTCAAATTAACACTACAAAGCTTAAAATGTTTGTTCAATTTTTCTTGTAAAGGATACTTCATTAAAGAAACATAGGTAGCATACTTTTCAAAAAAAAGAAAAGAAACGTAGGTAACATAATTATAAATTTGAATTTAGGGAGCTTATAAATGATCTCCCATTTAAAGTTATGGAACAAAAGATTATAGTATTTGACTGTAAAAAAAATTCGTAAAAGATTAATTCTTAAATACGTGATCATCATAGATTGAGCAAGAAACGTGTAATTTTCCATTAAGCCTAACTTTCTACAGCAACAATAAAAATAGCATCTTCCAACCGCCATCGGATTCTTAAAACATTTGTTCTATTGTCTTCAAAAAATTATTTAAAGGTATAACTTTCTTAAATAGTCTTGCTTATTTTCTTTGATATATTATATTCTTTTTTTTTTATCTTTCCCCATAACAGATTCAAATTCTTAGTTAAATTTTTAAAAACATTGGCTTAAATTTTGTGTTTAGAAAGGTGCATACTTAGATAGCAAAATTAAAGGAAACATGAACGTACGTAAGTAACGTATAAAAGATTTAATTCTTGACAGGGTGAAGGTTGGAATCTTCTATCTCCAAATGTTACGTTTAAATAATGACTTTAAATTAGATAGGTTATGCATTTATATGGTAGGAATTAGAGAGAATATGAGGTTCCACCTCAAAATCAATTACCAATAAGTGGAGTAACTCATATCTCTTTTATATTGATGTTGGACTCCCAACTTTTTCAATGTGGGACAATTGAGATCTCAACATACCCTTTCAAGATAATGTCTCTTTTGGGCTCACCAATCTTGAATCATATCTCAATTTTATTCTTATTTAGACCGATACCCATTAGAGAGAATATAAAGTTCTACTTCAAAACCAATTGACAATCAGGCTAGTTATATTGTTTACTCACTTTTTTTTTTTTTTTGGGAAACTTGTTTACTCACTATTTAACTATGAATTAATTTAAGTTGGCTGACAGATTATGGTATGTTTGTTTTTAATTCACGCTCTTAACACAGATCACCCATAGCCGAGCCTAAGTCGATGGTCTACAAAGCCATGGAGAAGTTGACGAAGTCGGACCGACATGTCGAGTCGGGAAAAACGACGGCGTCTTCCCACAAGCAACCGCCGAATGCCATAAACATTGCAGGGGAAAATGTTGGGGCAGTAATGGAAATCGTTGAGTCAAAACAACAAGGTGGACATATCATAAAGAAGGATAAAAAAACTGAAGAAAATTCAAAGGGCCAAAAAGCACTTAATTCAGTGCCAGCAACCACTTTTTTGAACACCAATTTTCAGACCGTAAACAATTCCCTTATTTTCGAGGCTTCTTTGGGTCACCGTGACCCCGGTTTGCACCTTGCTTTCTCCCGGAACCCGACCAGTGACCGGTTCACTAAGGATGACAAGAAGAAACAACACGAGAAATACTAGACAAGGAAGAAAGAGAAATTAATGCTGGATAATTAATATATAATACCAGAAAATATATTATTATTATTATTATTATTATGAGAATAAAATGAGACGGTTTATGGTTTGAGTTTTAGTGGTTTCATTGGCCATTAATTTATTTCTGTTTGAATAACATAAGTTTGAGCCGGTTTCTATTGGTTTCTGTTTTCTCATGCATTTTGTGGCCAAAATCAATTTTAAGTGAATTCTTGC

mRNA sequence

GCCTCATAGCATAAGCCCTCTTCTGTGCTTTCCTATAAAAATAACCCTAAACACTCACATATCGTTCATCATCCGAGTTTTAGTTATCGCATTTGACTTTGTCTATTTCTTTCCTACAAAAAAAACAAACACTTATTATTTTCTTACTTTCGTAATGGCTGGTCGTTTTGGTCGTTCGATGTACCGTTTTTCTTCCGTTAACCGACCCGTTGCCCCTGGCGGCAATACTTCAAGCCAAGATTCGGCTCAATATGATCGTCGGCGATATCCTTCTGCCAATAAAGAGGCCTCGTTCGAACCTCGCTCGCCACCACTTTCACCGAAGAGAGGATCGTTACCTGTGTCTCCAACATATTCTGTCAAGAAGATTGCTTCACCGCCTTCATCTCCGTCGTATAGAGCTTCAACTGCACGGGTTGTTAACTCGCCGCCATTGAAGTCGGTAGATGAATACCCTAAGAAAAATCCTACCATTCAACCCAGATCACCCATAGCCGAGCCTAAGTCGATGGTCTACAAAGCCATGGAGAAGTTGACGAAGTCGGACCGACATGTCGAGTCGGGAAAAACGACGGCGTCTTCCCACAAGCAACCGCCGAATGCCATAAACATTGCAGGGGAAAATGTTGGGGCAGTAATGGAAATCGTTGAGTCAAAACAACAAGGTGGACATATCATAAAGAAGGATAAAAAAACTGAAGAAAATTCAAAGGGCCAAAAAGCACTTAATTCAGTGCCAGCAACCACTTTTTTGAACACCAATTTTCAGACCGTAAACAATTCCCTTATTTTCGAGGCTTCTTTGGGTCACCGTGACCCCGGTTTGCACCTTGCTTTCTCCCGGAACCCGACCAGTGACCGGTTCACTAAGGATGACAAGAAGAAACAACACGAGAAATACTAGACAAGGAAGAAAGAGAAATTAATGCTGGATAATTAATATATAATACCAGAAAATATATTATTATTATTATTATTATTATGAGAATAAAATGAGACGGTTTATGGTTTGAGTTTTAGTGGTTTCATTGGCCATTAATTTATTTCTGTTTGAATAACATAAGTTTGAGCCGGTTTCTATTGGTTTCTGTTTTCTCATGCATTTTGTGGCCAAAATCAATTTTAAGTGAATTCTTGC

Coding sequence (CDS)

ATGGCTGGTCGTTTTGGTCGTTCGATGTACCGTTTTTCTTCCGTTAACCGACCCGTTGCCCCTGGCGGCAATACTTCAAGCCAAGATTCGGCTCAATATGATCGTCGGCGATATCCTTCTGCCAATAAAGAGGCCTCGTTCGAACCTCGCTCGCCACCACTTTCACCGAAGAGAGGATCGTTACCTGTGTCTCCAACATATTCTGTCAAGAAGATTGCTTCACCGCCTTCATCTCCGTCGTATAGAGCTTCAACTGCACGGGTTGTTAACTCGCCGCCATTGAAGTCGGTAGATGAATACCCTAAGAAAAATCCTACCATTCAACCCAGATCACCCATAGCCGAGCCTAAGTCGATGGTCTACAAAGCCATGGAGAAGTTGACGAAGTCGGACCGACATGTCGAGTCGGGAAAAACGACGGCGTCTTCCCACAAGCAACCGCCGAATGCCATAAACATTGCAGGGGAAAATGTTGGGGCAGTAATGGAAATCGTTGAGTCAAAACAACAAGGTGGACATATCATAAAGAAGGATAAAAAAACTGAAGAAAATTCAAAGGGCCAAAAAGCACTTAATTCAGTGCCAGCAACCACTTTTTTGAACACCAATTTTCAGACCGTAAACAATTCCCTTATTTTCGAGGCTTCTTTGGGTCACCGTGACCCCGGTTTGCACCTTGCTTTCTCCCGGAACCCGACCAGTGACCGGTTCACTAAGGATGACAAGAAGAAACAACACGAGAAATACTAG

Protein sequence

MAGRFGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEPRSPPLSPKRGSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAEPKSMVYKAMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVESKQQGGHIIKKDKKTEENSKGQKALNSVPATTFLNTNFQTVNNSLIFEASLGHRDPGLHLAFSRNPTSDRFTKDDKKKQHEKY
Homology
BLAST of Sed0013414 vs. NCBI nr
Match: XP_022147459.1 (serine/arginine repetitive matrix protein 1-like [Momordica charantia])

HSP 1 Score: 300.8 bits (769), Expect = 1.1e-77
Identity = 173/273 (63.37%), Postives = 208/273 (76.19%), Query Frame = 0

Query: 1   MAGRFGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEP--RSPPLSPKR 60
           MAGR+GRS YRFSSVNRP+APGGNTS+QDSAQYD R+YPSA +++S EP  RSPP SP+R
Sbjct: 1   MAGRYGRSFYRFSSVNRPLAPGGNTSAQDSAQYDGRQYPSATRDSSVEPRARSPPFSPRR 60

Query: 61  GSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAEPKS 120
            S P SPTYSVKK ASPPSSP YRA  AR V+SPP + VDEYPK  PT QPRSP A+ K 
Sbjct: 61  ESYPASPTYSVKKAASPPSSPPYRAPAARTVSSPP-RLVDEYPKYKPTTQPRSPEADQKP 120

Query: 121 MVYKAMEK-LTKSDRHVESGKTTAS--SHKQPPNAINIAGENVGAVMEIVES-KQQGGHI 180
           ++YKA+EK  TKSDR+ E+GKTT+S    +Q PNAINI+GEN+GAVMEIV+S K++GGHI
Sbjct: 121 VIYKAIEKATTKSDRYPETGKTTSSQKQQQQKPNAINISGENLGAVMEIVQSPKREGGHI 180

Query: 181 IKK----------DKKTEENSKGQK--------ALNSVPATTFLNTNFQTVNNSLIFEAS 240
           I+K          + +  E+SK QK        + +S+PA TFLN+NFQ+VNNSL++ AS
Sbjct: 181 IRKKESRGSTLHSNDQNNEHSKDQKGKEATSSSSSSSLPANTFLNSNFQSVNNSLLYNAS 240

Query: 241 LGHRDPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
           L HRDPGLHLAF+RNP  DRF  DD KK H KY
Sbjct: 241 LAHRDPGLHLAFARNPAGDRFAADD-KKHHPKY 271

BLAST of Sed0013414 vs. NCBI nr
Match: XP_038879892.1 (uncharacterized protein At1g10890-like isoform X1 [Benincasa hispida])

HSP 1 Score: 268.9 bits (686), Expect = 4.5e-68
Identity = 161/269 (59.85%), Postives = 192/269 (71.38%), Query Frame = 0

Query: 1   MAGR-FGRSMYRFSSVNRPVAP-GGNTSSQDSAQYDRRRYPSANKEASFEPRS---PPLS 60
           MAGR FGR +YRFSS NRP+AP   NTS QDSAQYD R+Y SA ++ S EPR+   PPLS
Sbjct: 1   MAGRNFGR-LYRFSSANRPLAPSAANTSGQDSAQYDGRQYRSATRDTSLEPRARSPPPLS 60

Query: 61  PKRGS-LPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIA 120
           P+R   LP SPTYS+KK  SPP SP YRA  ARV++SPP K+VDEY K  PT QPRSP A
Sbjct: 61  PRRDQPLPASPTYSIKKATSPPPSPPYRAPAARVISSPP-KTVDEYSKYKPTTQPRSPEA 120

Query: 121 EPKSMVYKAMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVE-SKQQG-G 180
           + K  + K ++K+TKSDRH ES KT +S   Q PNAINI G+NVGAVMEIVE SK++G G
Sbjct: 121 KQKPAIQKTVDKVTKSDRHHESSKTVSSHKVQQPNAINIKGDNVGAVMEIVESSKREGAG 180

Query: 181 HIIKKDKKTEE------------NSKGQKALNSVPATTFLNTNFQTVNNSLIFEASLGHR 240
           H+IKK +   E            N   +   +S+P +TFLN+NFQ+VNNSL+F A+L HR
Sbjct: 181 HVIKKKETARELLNKDNFANDQYNEASKTPNSSMPKSTFLNSNFQSVNNSLLFNATLAHR 240

Query: 241 DPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
           DPGLHLAFS NPT DR T DDKK+ H KY
Sbjct: 241 DPGLHLAFSLNPTGDRLTVDDKKQHHTKY 267

BLAST of Sed0013414 vs. NCBI nr
Match: XP_008437848.1 (PREDICTED: uncharacterized protein LOC103483156 [Cucumis melo] >KAA0048861.1 zyxin-like [Cucumis melo var. makuwa] >TYK20813.1 zyxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 268.1 bits (684), Expect = 7.7e-68
Identity = 160/270 (59.26%), Postives = 191/270 (70.74%), Query Frame = 0

Query: 1   MAGR-FGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEPRSPP----LS 60
           MAGR FGR MYRFSS NRP+AP  NTS QDSAQYDRR+YPSA ++ S EPRS P    L 
Sbjct: 1   MAGRNFGR-MYRFSSANRPLAPATNTSGQDSAQYDRRQYPSATRDTSLEPRSSPPRISLR 60

Query: 61  PKRGSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAE 120
                LP SPTYS+KK  SPPSSP YR   AR ++SPP K VDEYPK  P  QPRSP A+
Sbjct: 61  KDDPPLPASPTYSIKKATSPPSSPPYRGMAAREISSPP-KMVDEYPKYKPITQPRSPEAK 120

Query: 121 PKSMVYK--AMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVE-SKQQGG 180
            K  ++K   +EK+TKSDR+ E  K  +S   Q PNAINI GENVGAVMEIVE SK++GG
Sbjct: 121 QKPGIHKTTTVEKVTKSDRYHEPSKAVSSHKGQQPNAINIKGENVGAVMEIVESSKREGG 180

Query: 181 HIIKKDKKT------------EENSKGQKALN-SVPATTFLNTNFQTVNNSLIFEASLGH 240
           H+IKK K+T            ++N++  K  N S+P  TFLN+NFQ+VNNSL++ A+L +
Sbjct: 181 HMIKKIKETARGILNNNDMANDQNNEASKTTNSSMPTNTFLNSNFQSVNNSLLYNANLTY 240

Query: 241 RDPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
           RDPGLHL+FSRNPT DRF  DDKK+ H KY
Sbjct: 241 RDPGLHLSFSRNPTGDRFPVDDKKQHHTKY 268

BLAST of Sed0013414 vs. NCBI nr
Match: XP_004133795.1 (DNA-directed RNA polymerase II subunit RPB1 [Cucumis sativus] >KGN56393.1 hypothetical protein Csa_011382 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 6.1e-65
Identity = 162/269 (60.22%), Postives = 192/269 (71.38%), Query Frame = 0

Query: 1   MAGR-FGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEPRSPP----LS 60
           MAGR FGR +YRFSS NRP+AP  NTS QDSAQYD RRYPS+ ++ S EPRS P    L 
Sbjct: 1   MAGRNFGR-LYRFSSANRPLAPVTNTSGQDSAQYDGRRYPSSARDTSLEPRSSPPRVALR 60

Query: 61  PKRGSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAE 120
                LP SPTYS+KK  SPPSSPSYRA  AR ++S P K+VDEYPK  P  QPRSP A+
Sbjct: 61  RDDQPLPASPTYSIKKATSPPSSPSYRAPAARGISS-PTKTVDEYPKYKPNTQPRSPEAK 120

Query: 121 PKSMVY--KAMEKLTKSDRHVESGKTTASSHK--QPPNAINIAGENVGAVMEIVE-SKQQ 180
            K  ++    +EK+TKSDR+ ES K T SSHK    PNAINI GENVGAVMEIVE SK++
Sbjct: 121 QKPGIFHKSTVEKVTKSDRYHESSK-TLSSHKGQLQPNAINIKGENVGAVMEIVESSKRE 180

Query: 181 GGHIIKKDKKT------------EENSKGQKALN-SVPATTFLNTNFQTVNNSLIFEASL 240
           GGH+IKK K+T            ++N++  KA N S+P  TFLN+NFQ+VNNSL++ A+L
Sbjct: 181 GGHMIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANL 240

Query: 241 GHRDPGLHLAFSRNPTSDRFTKDDKKKQH 247
            HRDPGLHLAFSRNPT +R   DD KKQH
Sbjct: 241 THRDPGLHLAFSRNPTGERSGVDDHKKQH 266

BLAST of Sed0013414 vs. NCBI nr
Match: XP_038879901.1 (uncharacterized protein LOC120071611 isoform X2 [Benincasa hispida])

HSP 1 Score: 252.7 bits (644), Expect = 3.3e-63
Identity = 156/269 (57.99%), Postives = 187/269 (69.52%), Query Frame = 0

Query: 1   MAGR-FGRSMYRFSSVNRPVAP-GGNTSSQDSAQYDRRRYPSANKEASFEPRS---PPLS 60
           MAGR FGR +YRFSS NRP+AP   NTS QDSAQYD R+Y SA ++ S EPR+   PPLS
Sbjct: 1   MAGRNFGR-LYRFSSANRPLAPSAANTSGQDSAQYDGRQYRSATRDTSLEPRARSPPPLS 60

Query: 61  PKRGS-LPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIA 120
           P+R   LP SPTYS+KK  SPP SP YRA  ARV++SPP K+VDEY K        SP A
Sbjct: 61  PRRDQPLPASPTYSIKKATSPPPSPPYRAPAARVISSPP-KTVDEYSK--------SPEA 120

Query: 121 EPKSMVYKAMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVE-SKQQG-G 180
           + K  + K ++K+TKSDRH ES KT +S   Q PNAINI G+NVGAVMEIVE SK++G G
Sbjct: 121 KQKPAIQKTVDKVTKSDRHHESSKTVSSHKVQQPNAINIKGDNVGAVMEIVESSKREGAG 180

Query: 181 HIIKKDKKTEE------------NSKGQKALNSVPATTFLNTNFQTVNNSLIFEASLGHR 240
           H+IKK +   E            N   +   +S+P +TFLN+NFQ+VNNSL+F A+L HR
Sbjct: 181 HVIKKKETARELLNKDNFANDQYNEASKTPNSSMPKSTFLNSNFQSVNNSLLFNATLAHR 240

Query: 241 DPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
           DPGLHLAFS NPT DR T DDKK+ H KY
Sbjct: 241 DPGLHLAFSLNPTGDRLTVDDKKQHHTKY 259

BLAST of Sed0013414 vs. ExPASy TrEMBL
Match: A0A6J1D126 (serine/arginine repetitive matrix protein 1-like OS=Momordica charantia OX=3673 GN=LOC111016379 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 5.2e-78
Identity = 173/273 (63.37%), Postives = 208/273 (76.19%), Query Frame = 0

Query: 1   MAGRFGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEP--RSPPLSPKR 60
           MAGR+GRS YRFSSVNRP+APGGNTS+QDSAQYD R+YPSA +++S EP  RSPP SP+R
Sbjct: 1   MAGRYGRSFYRFSSVNRPLAPGGNTSAQDSAQYDGRQYPSATRDSSVEPRARSPPFSPRR 60

Query: 61  GSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAEPKS 120
            S P SPTYSVKK ASPPSSP YRA  AR V+SPP + VDEYPK  PT QPRSP A+ K 
Sbjct: 61  ESYPASPTYSVKKAASPPSSPPYRAPAARTVSSPP-RLVDEYPKYKPTTQPRSPEADQKP 120

Query: 121 MVYKAMEK-LTKSDRHVESGKTTAS--SHKQPPNAINIAGENVGAVMEIVES-KQQGGHI 180
           ++YKA+EK  TKSDR+ E+GKTT+S    +Q PNAINI+GEN+GAVMEIV+S K++GGHI
Sbjct: 121 VIYKAIEKATTKSDRYPETGKTTSSQKQQQQKPNAINISGENLGAVMEIVQSPKREGGHI 180

Query: 181 IKK----------DKKTEENSKGQK--------ALNSVPATTFLNTNFQTVNNSLIFEAS 240
           I+K          + +  E+SK QK        + +S+PA TFLN+NFQ+VNNSL++ AS
Sbjct: 181 IRKKESRGSTLHSNDQNNEHSKDQKGKEATSSSSSSSLPANTFLNSNFQSVNNSLLYNAS 240

Query: 241 LGHRDPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
           L HRDPGLHLAF+RNP  DRF  DD KK H KY
Sbjct: 241 LAHRDPGLHLAFARNPAGDRFAADD-KKHHPKY 271

BLAST of Sed0013414 vs. ExPASy TrEMBL
Match: A0A5A7U5I8 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00740 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 3.7e-68
Identity = 160/270 (59.26%), Postives = 191/270 (70.74%), Query Frame = 0

Query: 1   MAGR-FGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEPRSPP----LS 60
           MAGR FGR MYRFSS NRP+AP  NTS QDSAQYDRR+YPSA ++ S EPRS P    L 
Sbjct: 1   MAGRNFGR-MYRFSSANRPLAPATNTSGQDSAQYDRRQYPSATRDTSLEPRSSPPRISLR 60

Query: 61  PKRGSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAE 120
                LP SPTYS+KK  SPPSSP YR   AR ++SPP K VDEYPK  P  QPRSP A+
Sbjct: 61  KDDPPLPASPTYSIKKATSPPSSPPYRGMAAREISSPP-KMVDEYPKYKPITQPRSPEAK 120

Query: 121 PKSMVYK--AMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVE-SKQQGG 180
            K  ++K   +EK+TKSDR+ E  K  +S   Q PNAINI GENVGAVMEIVE SK++GG
Sbjct: 121 QKPGIHKTTTVEKVTKSDRYHEPSKAVSSHKGQQPNAINIKGENVGAVMEIVESSKREGG 180

Query: 181 HIIKKDKKT------------EENSKGQKALN-SVPATTFLNTNFQTVNNSLIFEASLGH 240
           H+IKK K+T            ++N++  K  N S+P  TFLN+NFQ+VNNSL++ A+L +
Sbjct: 181 HMIKKIKETARGILNNNDMANDQNNEASKTTNSSMPTNTFLNSNFQSVNNSLLYNANLTY 240

Query: 241 RDPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
           RDPGLHL+FSRNPT DRF  DDKK+ H KY
Sbjct: 241 RDPGLHLSFSRNPTGDRFPVDDKKQHHTKY 268

BLAST of Sed0013414 vs. ExPASy TrEMBL
Match: A0A1S3AVL1 (uncharacterized protein LOC103483156 OS=Cucumis melo OX=3656 GN=LOC103483156 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 3.7e-68
Identity = 160/270 (59.26%), Postives = 191/270 (70.74%), Query Frame = 0

Query: 1   MAGR-FGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEPRSPP----LS 60
           MAGR FGR MYRFSS NRP+AP  NTS QDSAQYDRR+YPSA ++ S EPRS P    L 
Sbjct: 1   MAGRNFGR-MYRFSSANRPLAPATNTSGQDSAQYDRRQYPSATRDTSLEPRSSPPRISLR 60

Query: 61  PKRGSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAE 120
                LP SPTYS+KK  SPPSSP YR   AR ++SPP K VDEYPK  P  QPRSP A+
Sbjct: 61  KDDPPLPASPTYSIKKATSPPSSPPYRGMAAREISSPP-KMVDEYPKYKPITQPRSPEAK 120

Query: 121 PKSMVYK--AMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVE-SKQQGG 180
            K  ++K   +EK+TKSDR+ E  K  +S   Q PNAINI GENVGAVMEIVE SK++GG
Sbjct: 121 QKPGIHKTTTVEKVTKSDRYHEPSKAVSSHKGQQPNAINIKGENVGAVMEIVESSKREGG 180

Query: 181 HIIKKDKKT------------EENSKGQKALN-SVPATTFLNTNFQTVNNSLIFEASLGH 240
           H+IKK K+T            ++N++  K  N S+P  TFLN+NFQ+VNNSL++ A+L +
Sbjct: 181 HMIKKIKETARGILNNNDMANDQNNEASKTTNSSMPTNTFLNSNFQSVNNSLLYNANLTY 240

Query: 241 RDPGLHLAFSRNPTSDRFTKDDKKKQHEKY 250
           RDPGLHL+FSRNPT DRF  DDKK+ H KY
Sbjct: 241 RDPGLHLSFSRNPTGDRFPVDDKKQHHTKY 268

BLAST of Sed0013414 vs. ExPASy TrEMBL
Match: A0A0A0L3R5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 3.0e-65
Identity = 162/269 (60.22%), Postives = 192/269 (71.38%), Query Frame = 0

Query: 1   MAGR-FGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEPRSPP----LS 60
           MAGR FGR +YRFSS NRP+AP  NTS QDSAQYD RRYPS+ ++ S EPRS P    L 
Sbjct: 1   MAGRNFGR-LYRFSSANRPLAPVTNTSGQDSAQYDGRRYPSSARDTSLEPRSSPPRVALR 60

Query: 61  PKRGSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAE 120
                LP SPTYS+KK  SPPSSPSYRA  AR ++S P K+VDEYPK  P  QPRSP A+
Sbjct: 61  RDDQPLPASPTYSIKKATSPPSSPSYRAPAARGISS-PTKTVDEYPKYKPNTQPRSPEAK 120

Query: 121 PKSMVY--KAMEKLTKSDRHVESGKTTASSHK--QPPNAINIAGENVGAVMEIVE-SKQQ 180
            K  ++    +EK+TKSDR+ ES K T SSHK    PNAINI GENVGAVMEIVE SK++
Sbjct: 121 QKPGIFHKSTVEKVTKSDRYHESSK-TLSSHKGQLQPNAINIKGENVGAVMEIVESSKRE 180

Query: 181 GGHIIKKDKKT------------EENSKGQKALN-SVPATTFLNTNFQTVNNSLIFEASL 240
           GGH+IKK K+T            ++N++  KA N S+P  TFLN+NFQ+VNNSL++ A+L
Sbjct: 181 GGHMIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANL 240

Query: 241 GHRDPGLHLAFSRNPTSDRFTKDDKKKQH 247
            HRDPGLHLAFSRNPT +R   DD KKQH
Sbjct: 241 THRDPGLHLAFSRNPTGERSGVDDHKKQH 266

BLAST of Sed0013414 vs. ExPASy TrEMBL
Match: A0A6J1G1N7 (uncharacterized protein LOC111449843 OS=Cucurbita moschata OX=3662 GN=LOC111449843 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 133/243 (54.73%), Postives = 161/243 (66.26%), Query Frame = 0

Query: 1   MAGRFGRSMYRFSSVNRPVAPGGNTSSQDSAQYDRRRYPSANKEASFEP--RSPPLSPKR 60
           MAGR  RSM+R SS  RP   GG+ S QDS QYD  RYPS  KE+S EP  RSP LSPKR
Sbjct: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYD-GRYPSTRKESSMEPRARSPSLSPKR 60

Query: 61  GSLPVSPTYSVKKIASPPSSPSYRASTARVVNSPPLKSVDEYPKKNPTIQPRSPIAEPKS 120
            S+  SPTYSVKK+ASP  SPSY  S+  V++S P K+VDE  K  PT QPRSP  EPK+
Sbjct: 61  ESVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQP-KAVDEDLKDKPTTQPRSPETEPKA 120

Query: 121 MVYKAMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVESKQQGGHIIKKD 180
           +V KA +K+T SDR +ES KTT +SHK  PN I IAGEN GAVMEI E K + G +I+K 
Sbjct: 121 VVGKATKKVTDSDRRIESSKTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEEGDMIEKK 180

Query: 181 ---------KKTEENSKGQKALNSVPATTFLNTNFQTVNNSLIFEASLGHRDPGLHLAFS 233
                    K  ++N +G K  +    +T+LN+N Q VNNS+++ ASL H DPGLH A S
Sbjct: 181 ERFRRTLNRKAKDQNKEGCK--DQKGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALS 239

BLAST of Sed0013414 vs. TAIR 10
Match: AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08
Identity = 74/307 (24.10%), Postives = 117/307 (38.11%), Query Frame = 0

Query: 17  RPVAPGGNTSSQDSAQYDRRRY---PSANKEASFEPR--SPPLSPKRGSLPVSPTYSVKK 76
           +P+ P    +   S   +R  Y   PS +      P+  +PP  P R S    P+    +
Sbjct: 72  QPLTPPRQKAPPTSPPQERSPYHSPPSRHMSPPTPPKAATPPPPPPRSSYTSPPSPKEVQ 131

Query: 77  IASP---PSSPSYRASTARVVNSPPLK----SVDEYPKKNPTIQPRSPIAEPKSMVYKAM 136
            A P   P+SP   A ++R   S  +K    S  E  +K P+ +  SP + P S+++   
Sbjct: 132 EALPPRKPNSPPSPAHSSRSTTSESVKTRSPSESENHRKAPSPRVLSPYSLPASLLHSER 191

Query: 137 EKLTKSDRHVE-------------------------------------SGKTTASSHKQP 196
           E   K+    E                                      G      H+QP
Sbjct: 192 ETTQKNILTAEKTSQTHETNHHNQNHNHDYNQNHNYNQNHSYNQNQNHQGNNPKKMHRQP 251

Query: 197 PNA----------INIAGENVGAVMEIVESKQ--------------------QGGHIIKK 236
            ++          I IAGEN GAVMEI+ S Q                    +G  +   
Sbjct: 252 SSSDSENIMSTRVITIAGENKGAVMEILRSPQGNKTGGSGTHSSRVSHGTGEKGRRLQSS 311

BLAST of Sed0013414 vs. TAIR 10
Match: AT1G75260.1 (oxidoreductases, acting on NADH or NADPH )

HSP 1 Score: 43.9 bits (102), Expect = 2.2e-04
Identity = 34/125 (27.20%), Postives = 55/125 (44.00%), Query Frame = 0

Query: 118 SMVYKAMEKLTKSDRHVESGKTTASSHKQPPNAINIAGENVGAVMEIVESKQ-------- 177
           SM  K  E +      +  GK+      +  +   + GEN GA M I   K         
Sbjct: 315 SMSRKIKEDIRDGISKLTWGKSNGDD--KSVSVYTLTGENKGATMGIGSEKDKKDGEVHI 374

Query: 178 QGGHIIKKDKKTE------ENSKGQKALNSVPATTFLNTNFQTVNNSLIFEASLGHRDPG 229
           + G+    D+ +       EN K  +A      T ++N N Q +NNS++ E+S+   DPG
Sbjct: 375 RRGYRSNPDESSNTTATETENPKDDEAEEEASFTAYINGNTQGINNSIVVESSVSENDPG 434

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022147459.11.1e-7763.37serine/arginine repetitive matrix protein 1-like [Momordica charantia][more]
XP_038879892.14.5e-6859.85uncharacterized protein At1g10890-like isoform X1 [Benincasa hispida][more]
XP_008437848.17.7e-6859.26PREDICTED: uncharacterized protein LOC103483156 [Cucumis melo] >KAA0048861.1 zyx... [more]
XP_004133795.16.1e-6560.22DNA-directed RNA polymerase II subunit RPB1 [Cucumis sativus] >KGN56393.1 hypoth... [more]
XP_038879901.13.3e-6357.99uncharacterized protein LOC120071611 isoform X2 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D1265.2e-7863.37serine/arginine repetitive matrix protein 1-like OS=Momordica charantia OX=3673 ... [more]
A0A5A7U5I83.7e-6859.26Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00740 PE=... [more]
A0A1S3AVL13.7e-6859.26uncharacterized protein LOC103483156 OS=Cucumis melo OX=3656 GN=LOC103483156 PE=... [more]
A0A0A0L3R53.0e-6560.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1[more]
A0A6J1G1N71.1e-5154.73uncharacterized protein LOC111449843 OS=Cucurbita moschata OX=3662 GN=LOC1114498... [more]
Match NameE-valueIdentityDescription
AT2G46630.11.1e-0824.10unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXP... [more]
AT1G75260.12.2e-0427.20oxidoreductases, acting on NADH or NADPH [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 239..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..249
NoneNo IPR availablePANTHERPTHR33472:SF1EXTENSIN-RELATEDcoord: 136..246
NoneNo IPR availablePANTHERPTHR33472OS01G0106600 PROTEINcoord: 136..246

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0013414.1Sed0013414.1mRNA