Sed0013393 (gene) Chayote v1

Overview


Name	Sed0013393
Type	gene
Organism	Sechium edule (Chayote v1)
Description	UPF0161 protein At3g09310
Location	LG14: 4912829 .. 4915625 (-)
RNA-Seq Expression	Sed0013393
Synteny	Sed0013393

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGGAAGAACCAACAGTAGCAAAGTGACAATGGCGGTTCTTCCCTCCACAAACTGCCACAGAGCCCCAAACCAGAACCCAATCTTCTCCGCCGCCCGCCGCCGTCAGATTCACCACTCCGCCGCCGCCGCCGCTATTCAATTTAATGGCCGCCCAACGCTCCGTCGGCCGTTAATCCAAAGCCAAACGCGCGCAAAATCGAATTCAAGCACGAACGGCGACCAAGGTACTCCACCTCTTCTTCACTCCATTTTTTGATTCAATCAACGCACAGACTATGATGAATTAGGTCATTTGAATCCTGTTCATAGATGGCGAAGTGGACAATCTAGGAGTTAAAGCAGCATTATCCATGCTTAAATTCTACAAACGTAAGTAGAATGGTGTTATTTGTTCGAATTTCGATCGGAATCGAAGGTAATACGAATCGTTGAGTACTGATTTTGCGTAACAGGAGAAATTTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGAGTATTCGATGCAAGCTTACAAGAAATATGGTGTTGCAAAGGGTACTGTCTTGACTGCTTGGCGTCTCTGCCGATGTAATCCCCTTGGTAATTACATTGCTCTTGTTCAAAACACCAAGATGAATTTGAGAATGGAATTTTTCCGTACTTTTTCTTTGATGTTTGTTTCTGCATAATACTGATTCTTGTGTTAGAGTAATTACCATGATGAAGGTGTTTGGATGGGGAATTGTAGAGGGTTATTTTGGGTGATTAAAAATTTGAGTTTTAGTAATAACTCGTTTGGGTGAAGACTTGGGCTTTGAAGGCATAAGGTCCCAGTTCGAGACTCGCCTATGACATTGCTTCTTCGAAAAGAAAAATTCGTTTGGATGTGGTTATTTGTAGAGAGGTTAAAGAGAATAGCTCGTTTGAATTTTTCGTAGAGGGGTTATAGACAATAGCTGGTTTGGATGTGATTAGAAATGAGTGATTATTTTGAAGGGTTAAAATTGAGTGGATAGAAATGAGTAATTATTTTGAGTGGTTAGAAATGAGTGATGATTTTGGGTGATTACAATAGCTCGTTTAGATGTGATTGTTTAAAGAGTAGTTGAAGCTCATTTGTAATAATTCGTTTATTATGTCAAACAAACATCTCCAGATTAGTAGTATAGCATTTGTATTAGATTAATATTAGCTACTTTGTGTTCTTGTCATATTGTATAAGGTCTATTGGGCTCATTAGGTTTACATTTGGTTGTTTAGTGTGCGGTACACAGGGTGCAGCCACCACCACCATCGTAATCAATATAATTTCTCTCTACATTCTCATGTATCATTGGCTTCCAATATACATTTCTTTATTATATTACTTTGTAGGTGGATCAGGGTTTGATCCTCCGCGTTGGTTTGATGAAGAAAGCTTGCCAGAACCAGAAGATTGACATTTTCAAATATTCTGTAAGTACCAAGAATTTACGTTTACTGCTGCATTTTTTCTGCCTTGGTTTTGGTAGACATGAAAGTAATTTTCAGACTACAGATTATTTAAGGGTTTTGATATTTGGGGTAAAGAGTTGTAGAAGCCAGGAAGATTGTGTTGATGTGAAAGTGGTTAAGTTTCCCATTGAAATGGGTGCAACTCATGTATAAGTACATTTTGCAATGTATATGATTAATGATTACACATTAGCTACATGTCAAACATTCCAACCTTAACATGTTTTACTGTTTTACCAAAGTAAGTCAAATTTCTGTCTTTGAATGATGCAAAAAGATTATGATCAGCAATCCTTCTATAATTAGTACGGTTAATCAAATCTTGTAGTACATTATGTGTGTTGAGATTGCCCGATCTATACGATGTTGACTTCTTAAAGGATATATGAAGGGGAAACATCTTCACACTTGTTGCTCGTCTTTGGTCGTTCTCAAAATATGATCGCAGATGGTTGTTTGATAATCGTTTAGTTTTTTAATTATGTTTGTTTTCTCATCATTCTTCTACCCTGTCATCTTTCTCAAGAAAACATTTTAAGTTTTTTGCCGATTTCCAAAAAAAAGTAAAACATGTTCTGAGATGGTTGTATGATAACCATTTGGTTTTTGAATTGTGTTTGTTTTACATCATTTTTCTACCATGTCATCTTTCTTAGAAAAACGTTGAAGTTTTTTGCCAATTTCCAAAAAATAAAAACGTTTTTGAAAACTACTCTTTTTTACTTTTCAAAACCTAATTTAATATTTGAAAACATAGGTAAAATATTAAAATGTAGTTAACAAAGCTAAGAAACCCATACGAGAAAGTGGTGTTTATAAGCCTAAAACAAAAAATCATATGGGGACTTAAAGTTAGAGCTAGTTTATGATTTAAGATCTTTTTAATGCTCATGTTGAATCACTGGATCAAAAGTTTAAGCTATTGGGGTGGGGTAAATCCATATTTTCTTTCCACTTTTCTGCTGTTTTGAGGGTGAGTTTCTGTTCTGTAATTTGAGTTAGTTTAGTTCATTTGTTGAAGATTCTTTCAACCCATTACACTGATTTTATGCAGGTTGTGTTGGGGATCTGACCAGTGGAGAGTTAAGATTATTGTAGATATTATTATAGAAATACCGAATGGGTCAGGAGTGCAATGATTTCATTGTTTGGTTGTAAATCAGTTCAAGACCAGTGTCATAGGTTCGATCTCGAGAATCGGTATTTTGCAAGTTAGAAATCACATTTATTGTATAATTTCTAATTTTGAGTATAATTATTATTTTTATCATTTTAGTTTAACCAACATAGGAATGTGAAAGGTTGGTG

mRNA sequence

CACGGAAGAACCAACAGTAGCAAAGTGACAATGGCGGTTCTTCCCTCCACAAACTGCCACAGAGCCCCAAACCAGAACCCAATCTTCTCCGCCGCCCGCCGCCGTCAGATTCACCACTCCGCCGCCGCCGCCGCTATTCAATTTAATGGCCGCCCAACGCTCCGTCGGCCGTTAATCCAAAGCCAAACGCGCGCAAAATCGAATTCAAGCACGAACGGCGACCAAGATGGCGAAGTGGACAATCTAGGAGTTAAAGCAGCATTATCCATGCTTAAATTCTACAAACGAGAAATTTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGAGTATTCGATGCAAGCTTACAAGAAATATGGTGTTGCAAAGGGTACTGTCTTGACTGCTTGGCGTCTCTGCCGATGTAATCCCCTTGGTGGATCAGGGTTTGATCCTCCGCGTTGGTTTGATGAAGAAAGCTTGCCAGAACCAGAAGATTGACATTTTCAAATATTCTGTTGTGTTGGGGATCTGACCAGTGGAGAGTTAAGATTATTGTAGATATTATTATAGAAATACCGAATGGGTCAGGAGTGCAATGATTTCATTGTTTGGTTGTAAATCAGTTCAAGACCAGTGTCATAGGTTCGATCTCGAGAATCGGTATTTTGCAAGTTAGAAATCACATTTATTGTATAATTTCTAATTTTGAGTATAATTATTATTTTTATCATTTTAGTTTAACCAACATAGGAATGTGAAAGGTTGGTG

Coding sequence (CDS)

ATGGCGGTTCTTCCCTCCACAAACTGCCACAGAGCCCCAAACCAGAACCCAATCTTCTCCGCCGCCCGCCGCCGTCAGATTCACCACTCCGCCGCCGCCGCCGCTATTCAATTTAATGGCCGCCCAACGCTCCGTCGGCCGTTAATCCAAAGCCAAACGCGCGCAAAATCGAATTCAAGCACGAACGGCGACCAAGATGGCGAAGTGGACAATCTAGGAGTTAAAGCAGCATTATCCATGCTTAAATTCTACAAACGAGAAATTTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGAGTATTCGATGCAAGCTTACAAGAAATATGGTGTTGCAAAGGGTACTGTCTTGACTGCTTGGCGTCTCTGCCGATGTAATCCCCTTGGTGGATCAGGGTTTGATCCTCCGCGTTGGTTTGATGAAGAAAGCTTGCCAGAACCAGAAGATTGA

Protein sequence

MAVLPSTNCHRAPNQNPIFSAARRRQIHHSAAAAAIQFNGRPTLRRPLIQSQTRAKSNSSTNGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVLTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

Homology

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BLAST of Sed0013393 vs. NCBI nr
Match: XP_022931846.1 (UPF0161 protein At3g09310 [Cucurbita moschata])

HSP 1 Score: 265.4 bits (677), Expect = 3.1e-67
Identity = 129/153 (84.31%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   MAVLPSTNCHRAPNQNPIFSAARRRQIHHSAAAAAIQFNGRPTLRRPLIQSQTRAKSNSS 60
           MAVLP+TNCH+  NQNPIF A   ++ H SAAA +I+FNG+  LRRPLI S+TRA SNSS
Sbjct: 1   MAVLPTTNCHKLQNQNPIFFAGGCQKSHRSAAAFSIRFNGQ-KLRRPLIISETRATSNSS 60

Query: 61  TNGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTV 120
            NGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+
Sbjct: 61  ANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTI 120

Query: 121 LTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 154
           LTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Sbjct: 121 LTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]

BLAST of Sed0013393 vs. NCBI nr
Match: KAG7027339.1 (UPF0161 protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257.7 bits (657), Expect = 6.4e-65
Identity = 128/153 (83.66%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MAVLPSTNCHRAPNQNPIFSAARRRQIHHSAAAAAIQFNGRPTLRRPLIQSQTRAKSNSS 60
           MAVLP+TNCH+   Q PIF A   +Q H SAAA +I+FNG+  LRRPLI S+TRA SNSS
Sbjct: 1   MAVLPTTNCHKL--QKPIFFAGGCQQRHRSAAAFSIRFNGQ-KLRRPLIISETRATSNSS 60

Query: 61  TNGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTV 120
            NGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+
Sbjct: 61  ANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTI 120

Query: 121 LTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 154
           LTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Sbjct: 121 LTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 150

[Close]

BLAST of Sed0013393 vs. NCBI nr
Match: XP_023518310.1 (UPF0161 protein At3g09310 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.5 bits (654), Expect = 1.4e-64
Identity = 126/153 (82.35%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 1   MAVLPSTNCHRAPNQNPIFSAARRRQIHHSAAAAAIQFNGRPTLRRPLIQSQTRAKSNSS 60
           MAVLP+TNCH+  NQNPIF A R  Q   SAAA +I+FNG+  LRRPLI S++RA SNSS
Sbjct: 1   MAVLPTTNCHKLQNQNPIFFAGRCHQSRRSAAAFSIRFNGQ-KLRRPLIISESRATSNSS 60

Query: 61  TNGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTV 120
            N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+
Sbjct: 61  ANRDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTI 120

Query: 121 LTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 154
           LTAWRLCRCNP G SGFDPPRWFDEE LPEPED
Sbjct: 121 LTAWRLCRCNPFGVSGFDPPRWFDEERLPEPED 152

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BLAST of Sed0013393 vs. NCBI nr
Match: XP_038882937.1 (UPF0161 protein At3g09310 isoform X3 [Benincasa hispida])

HSP 1 Score: 256.1 bits (653), Expect = 1.9e-64
Identity = 127/153 (83.01%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 1   MAVLPSTNCHRAPNQNPIFSAARRRQIHHSAAAAAIQFNGRPTLRRPLIQSQTRAKSNSS 60
           MAVL +TNCH+  NQNP F A R  Q   SAA  +IQ+N R  LRRPLI S+TRA SNSS
Sbjct: 1   MAVLSTTNCHKLQNQNPSFFAGRCHQRPFSAADFSIQYN-RRNLRRPLILSKTRATSNSS 60

Query: 61  TNGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTV 120
           +N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+
Sbjct: 61  SNSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTI 120

Query: 121 LTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 154
           LTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
Sbjct: 121 LTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 152

[Close]

BLAST of Sed0013393 vs. NCBI nr
Match: XP_022966116.1 (UPF0161 protein At3g09310 [Cucurbita maxima] >XP_022966117.1 UPF0161 protein At3g09310 [Cucurbita maxima])

HSP 1 Score: 254.2 bits (648), Expect = 7.1e-64
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 1   MAVLPSTNCHRAPNQNPIFSAARRRQIHHSAAAAAIQFNGRPTLRRPLIQSQTRAKSNSS 60
           MAVLP+TNCH+   Q PIF A   +Q H SAAA +I+FNG+  LRRPLI S+TRA SNSS
Sbjct: 1   MAVLPTTNCHKL--QKPIFFAGGCQQTHRSAAAFSIRFNGQ-KLRRPLIISETRATSNSS 60

Query: 61  TNGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTV 120
            N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRY+PTCSEYSMQAYKKYGVAKGT+
Sbjct: 61  ANEDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYVPTCSEYSMQAYKKYGVAKGTI 120

Query: 121 LTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 154
           LTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Sbjct: 121 LTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 150

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BLAST of Sed0013393 vs. ExPASy Swiss-Prot
Match: Q9SR32 (UPF0161 protein At3g09310 OS=Arabidopsis thaliana OX=3702 GN=At3g09310 PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 2.2e-36
Identity = 77/138 (55.80%), Postives = 95/138 (68.84%), Query Frame = 0


Query: 14  NQNPIFSAARRRQIHHSAAAAAIQFNGRP--TLRRPLIQSQTRAKSNSSTNGDQDG-EVD 73
           N+NP+       + H     + ++F+  P  T  +    S     S       QDG E++
Sbjct: 19  NRNPL-------KPHRQFNESCLRFDHLPRNTKNQLRCLSAKSTPSKPDPASPQDGEELE 78

Query: 74  NLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVLTAWRLCRCN 133
           ++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+AYKKYGV KGTVLT WRLCRCN
Sbjct: 79  SVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSMEAYKKYGVLKGTVLTTWRLCRCN 138

Query: 134 PLGGSGFDPPRWFDEESL 149
           PLGGSGFDPPRWF E  +
Sbjct: 139 PLGGSGFDPPRWFGESGI 149

[Close]

BLAST of Sed0013393 vs. ExPASy Swiss-Prot
Match: Q2S3T2 (Putative membrane protein insertion efficiency factor OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=SRU_1017 PE=3 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-18
Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 78  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVLTAWRLCRCNPLGGSGF 137
           + +++ Y+  +SP L  +CR+ PTCS Y++QA+++YG  KG VLT  RL RC+P GG G+
Sbjct: 17  IGLVRLYQLVLSPHLGRTCRFHPTCSAYAIQAFREYGALKGLVLTVHRLLRCHPWGGHGY 76

Query: 138 DPPRWFDEE 147
           DPPRWFDEE
Sbjct: 77  DPPRWFDEE 85

[Close]

BLAST of Sed0013393 vs. ExPASy Swiss-Prot
Match: B0T0Z8 (Putative membrane protein insertion efficiency factor OS=Caulobacter sp. (strain K31) OX=366602 GN=Caul_4526 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16
Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 0


Query: 81  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVLTAWRLCRCNPLGGSGFDPP 140
           LK YK  +SP +   CRYLPTCSEY+ QA K +G  KG+ L   R+CRCNPLGGSG+DPP
Sbjct: 12  LKAYKTTLSPFIGRQCRYLPTCSEYAAQALKDHGPLKGSWLAVGRICRCNPLGGSGYDPP 71

[Close]

BLAST of Sed0013393 vs. ExPASy Swiss-Prot
Match: Q11SD8 (Putative membrane protein insertion efficiency factor OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=CHU_2420 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-15
Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 81  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVLTAWRLCRCNPLGGSGFDP 140
           +K Y+  ISPLLP +CRY PTCSEY +QA +KYG  KG  L   R+C CNP GGSG+DP
Sbjct: 19  VKIYQYSISPLLPGACRYTPTCSEYCVQAIEKYGPLKGIWLGTKRICSCNPWGGSGYDP 77

[Close]

BLAST of Sed0013393 vs. ExPASy Swiss-Prot
Match: B0K8I2 (Putative membrane protein insertion efficiency factor OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=Teth39_2293 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-15
Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 80  MLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVLTAWRLCRCNPLGGSGFDP 139
           ++K Y+R ISP+ P SCR+ PTCS+YS++A  KYG+ KG +++ WR+ RCNP    G+DP
Sbjct: 8   LIKLYQRYISPMKPRSCRFYPTCSQYSIEAISKYGLLKGGIMSIWRILRCNPFNPGGYDP 67

[Close]

BLAST of Sed0013393 vs. ExPASy TrEMBL
Match: A0A6J1EUS1 (UPF0161 protein At3g09310 OS=Cucurbita moschata OX=3662 GN=LOC111438132 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67
Identity = 129/153 (84.31%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   MAVLPSTNCHRAPNQNPIFSAARRRQIHHSAAAAAIQFNGRPTLRRPLIQSQTRAKSNSS 60
           MAVLP+TNCH+  NQNPIF A   ++ H SAAA +I+FNG+  LRRPLI S+TRA SNSS
Sbjct: 1   MAVLPTTNCHKLQNQNPIFFAGGCQKSHRSAAAFSIRFNGQ-KLRRPLIISETRATSNSS 60

Query: 61  TNGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTV 120
            NGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+
Sbjct: 61  ANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTI 120

Query: 121 LTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 154
           LTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Sbjct: 121 LTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]

BLAST of Sed0013393 vs. ExPASy TrEMBL
Match: A0A6J1HNH0 (UPF0161 protein At3g09310 OS=Cucurbita maxima OX=3661 GN=LOC111465896 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.4e-64
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 1   MAVLPSTNCHRAPNQNPIFSAARRRQIHHSAAAAAIQFNGRPTLRRPLIQSQTRAKSNSS 60
           MAVLP+TNCH+   Q PIF A   +Q H SAAA +I+FNG+  LRRPLI S+TRA SNSS
Sbjct: 1   MAVLPTTNCHKL--QKPIFFAGGCQQTHRSAAAFSIRFNGQ-KLRRPLIISETRATSNSS 60

Query: 61  TNGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTV 120
            N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRY+PTCSEYSMQAYKKYGVAKGT+
Sbjct: 61  ANEDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYVPTCSEYSMQAYKKYGVAKGTI 120

Query: 121 LTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 154
           LTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Sbjct: 121 LTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 150

[Close]

BLAST of Sed0013393 vs. ExPASy TrEMBL
Match: A0A0A0KXI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296120 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.3e-63
Identity = 126/153 (82.35%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MAVLPSTNCHRAPNQNPIFSAARRRQIHHSAAAAAIQFNGRPTLRRPLIQSQTRAKSNSS 60
           MAVLP+TNCH + N NPIF A R  Q   SAA  +I+FN R  LRR LI S+TRA SNSS
Sbjct: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCR-KLRRSLILSETRATSNSS 60

Query: 61  TNGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTV 120
            N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+
Sbjct: 61  ANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTI 120

Query: 121 LTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 154
           LTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Sbjct: 121 LTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]

BLAST of Sed0013393 vs. ExPASy TrEMBL
Match: A0A1S3BJN3 (UPF0161 protein At3g09310 OS=Cucumis melo OX=3656 GN=LOC103490314 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.5e-62
Identity = 124/153 (81.05%), Postives = 129/153 (84.31%), Query Frame = 0


Query: 1   MAVLPSTNCHRAPNQNPIFSAARRRQIHHSAAAAAIQFNGRPTLRRPLIQSQTRAKSNSS 60
           MAVLP+TNC+   N NPIF   R  Q    AA  +I+FN R  LRRPLI S+TRA S SS
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCR-KLRRPLILSETRATSKSS 60

Query: 61  TNGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTV 120
            N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTV
Sbjct: 61  ANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTV 120

Query: 121 LTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 154
           LTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Sbjct: 121 LTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]

BLAST of Sed0013393 vs. ExPASy TrEMBL
Match: A0A6J1CPK9 (UPF0161 protein At3g09310 OS=Momordica charantia OX=3673 GN=LOC111013566 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 119/153 (77.78%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 1   MAVLPSTNCHRAPNQNPIFSAARRRQIHHSAAAAAIQFNGRPTLRRPLIQSQTRAKSNSS 60
           MAVLP+TNCHR  NQNPIF   +     H +A  AI+FNGR  LRRPLI  ++RAK NSS
Sbjct: 1   MAVLPTTNCHRPQNQNPIFFTHQ----SHCSAGFAIRFNGR-KLRRPLILCESRAKRNSS 60

Query: 61  TNGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTV 120
            N +QDGEVDNLG++AALS+LKFYKREISPLLP SCRYLPTCSEYSMQAYKKYGV KGT+
Sbjct: 61  ANSEQDGEVDNLGIRAALSVLKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTI 120

Query: 121 LTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 154
           LTAWRLCRCNPLGGSGFDPPRWFDEES PEPED
Sbjct: 121 LTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED 148

[Close]

BLAST of Sed0013393 vs. TAIR 10
Match: AT3G09310.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast hits to 5781 proteins in 1903 species: Archae - 0; Bacteria - 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3; Other Eukaryotes - 1778 (source: NCBI BLink). )

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-37
Identity = 77/138 (55.80%), Postives = 95/138 (68.84%), Query Frame = 0


Query: 14  NQNPIFSAARRRQIHHSAAAAAIQFNGRP--TLRRPLIQSQTRAKSNSSTNGDQDG-EVD 73
           N+NP+       + H     + ++F+  P  T  +    S     S       QDG E++
Sbjct: 19  NRNPL-------KPHRQFNESCLRFDHLPRNTKNQLRCLSAKSTPSKPDPASPQDGEELE 78

Query: 74  NLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVLTAWRLCRCN 133
           ++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+AYKKYGV KGTVLT WRLCRCN
Sbjct: 79  SVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSMEAYKKYGVLKGTVLTTWRLCRCN 138

Query: 134 PLGGSGFDPPRWFDEESL 149
           PLGGSGFDPPRWF E  +
Sbjct: 139 PLGGSGFDPPRWFGESGI 149

The following BLAST results are available for this feature:

BLAST of Sed0013393 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931846.1	3.1e-67	84.31	UPF0161 protein At3g09310 [Cucurbita moschata]	[more]
KAG7027339.1	6.4e-65	83.66	UPF0161 protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023518310.1	1.4e-64	82.35	UPF0161 protein At3g09310 [Cucurbita pepo subsp. pepo]	[more]
XP_038882937.1	1.9e-64	83.01	UPF0161 protein At3g09310 isoform X3 [Benincasa hispida]	[more]
XP_022966116.1	7.1e-64	82.35	UPF0161 protein At3g09310 [Cucurbita maxima] >XP_022966117.1 UPF0161 protein At3...	[more]

BLAST of Sed0013393 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR32	2.2e-36	55.80	UPF0161 protein At3g09310 OS=Arabidopsis thaliana OX=3702 GN=At3g09310 PE=2 SV=2	[more]
Q2S3T2	2.7e-18	53.62	Putative membrane protein insertion efficiency factor OS=Salinibacter ruber (str...	[more]
B0T0Z8	1.1e-16	61.67	Putative membrane protein insertion efficiency factor OS=Caulobacter sp. (strain...	[more]
Q11SD8	1.3e-15	61.02	Putative membrane protein insertion efficiency factor OS=Cytophaga hutchinsonii ...	[more]
B0K8I2	1.3e-15	51.67	Putative membrane protein insertion efficiency factor OS=Thermoanaerobacter pseu...	[more]

BLAST of Sed0013393 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EUS1	1.5e-67	84.31	UPF0161 protein At3g09310 OS=Cucurbita moschata OX=3662 GN=LOC111438132 PE=3 SV=...	[more]
A0A6J1HNH0	3.4e-64	82.35	UPF0161 protein At3g09310 OS=Cucurbita maxima OX=3661 GN=LOC111465896 PE=3 SV=1	[more]
A0A0A0KXI4	1.3e-63	82.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296120 PE=3 SV=1	[more]
A0A1S3BJN3	5.5e-62	81.05	UPF0161 protein At3g09310 OS=Cucumis melo OX=3656 GN=LOC103490314 PE=3 SV=1	[more]
A0A6J1CPK9	1.2e-61	77.78	UPF0161 protein At3g09310 OS=Momordica charantia OX=3673 GN=LOC111013566 PE=3 SV...	[more]

BLAST of Sed0013393 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09310.1	1.6e-37	55.80	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002696	Putative membrane protein insertion efficiency factor	SMART	SM01234	Haemolytic_2	coord: 73..140 e-value: 6.3E-35 score: 132.0
IPR002696	Putative membrane protein insertion efficiency factor	PFAM	PF01809	YidD	coord: 76..139 e-value: 9.0E-26 score: 89.5
IPR002696	Putative membrane protein insertion efficiency factor	TIGRFAM	TIGR00278	TIGR00278	coord: 79..140 e-value: 7.0E-21 score: 71.9
IPR002696	Putative membrane protein insertion efficiency factor	PANTHER	PTHR33383	MEMBRANE PROTEIN INSERTION EFFICIENCY FACTOR-RELATED	coord: 28..149
IPR002696	Putative membrane protein insertion efficiency factor	HAMAP	MF_00386	UPF0161_YidD	coord: 73..141 score: 20.660767

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013393.1	Sed0013393.1	mRNA
Sed0013393.2	Sed0013393.2	mRNA