Sed0013348 (gene) Chayote v1

Overview


Name	Sed0013348
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein TIC 21, chloroplastic
Location	LG05: 37694599 .. 37700479 (+)
RNA-Seq Expression	Sed0013348
Synteny	Sed0013348

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGTTACAGATTTTAGAACCCTGCAAAACGCTTACAATTGTAGGATCCATCCACCATAGCATCTCCTCCCCCTGCAGATGCAGTCGCTTCTCTCGCCGGTAGCTCGCGGCGCCGCCGCCGTGTTTTCATCGGATTCACACCTCAGCCGCTTCCATCGCCACCCTTTCTCCGCACGCCAAGACATCAATCCCAATTCCCTCCCTTCACTTACTGCCATTTCATCATCTTCTTCTTCGTTGTTTCTTTTGAAGAAATTTGGTACTTTGAAGCATAGAATAAGAGCACGATTTTGGTCGGAAACGCGCGCTTCTTCTAGTTTCATTTCGCCGACGGCTCCCCAAAATGATGAGGGTGAAAGGGCCAAACTCGCTCAGGTTCTCTTTCTTTCCATTCTCTATGCTGTTTTTTACTCAATCCTTTTGATGACTATTGTGACCGGGAAATGTAGTATTGAAATTAGGTTCACCTTGCTTTTAGGCTCAGGTTTTGTTTCTTTTCATTCCCCAAGTCTAGGAGAGTGCCGTGAAGAATTTTTTATGTTGGTGTACTCATTGAATGAATTTTTGTGTTTATTAGTTTCAGAATCTTCTTTGTTCTCTAATTTGATTGACTCTGGATGTTGTCTATCTTACATTCCTTCCTACTGAAGGTTTTAGGGTTTAATCTCTTTACCTCTCCCTGATAAAACAGAATAAGTGAACAGATAAATTACATTTGCAATTGACAGCTACGGAGGAGCAGAAGCTAGGTATATGTTTTTTTTTTTAAAACTGGGAAATCAGTGCTTCACCCCAATATACCCGGGGTATCCATGCCCGTCCCTAGGTCGGGCATTGGGAGACATTAAAAAAATGGAGACAAGAGAGGTGTCTACAAATTAAGCCTTCGACCATTGCGCCACTCCTTGGGGATGAAAGCTAGGTATATGTATTAGATACTGATTGCCCCTAAGGGGTGGCACATTGGTTGAAGATTTGGGTTTTAAAGGTATGCTTCTCTCAAGGTTCCAGGTTTGAGACTCACCGACACCTATGACATTACTCCTTTGATATCTCCTGGTGCATGGCCTAGGGAGGGGCATGGTTACCCTTGTTTCAAAAAAGAAAAAAAGATTTTGGTAACGGAAAAGAACATTGAACTTTTAGTAGAAGGATGATTTTTCTCCCCTGGAGATTCGTAGAGAACACATATAGAACCTTTGTTTAGGAATCTGAAGGTGGATTTACAAGGAGAGTCTGTGATTGTCCTAATTGACTGTGACTCAATACCCAAATTCTTTGCAATCTGAAACATATTAGTATGGGGTCTTATTGGTGTTAGATAATGCAATTTGGAGAAATGAGTGTGCTGTGCATAGGAGTCAACTCTTCTTAGCTGTAGGGAATTGAGGTTTATTTCCCTTTTGAGCTGGGTAATTCTAATATTATACTTGAAATAGTGGTTAAGCATGGGAAGAACTGTGCTGCTAGTAATATGAGTCAGAACCATGACTCTCTCCTCCTTTTTCTCTCCTGCTTCTCTCTTCCCTGCCACCATTCCTTTCGTTCATCATGATGACTTTCCAGCCTGTTCCTCAGACATGACCCTTTCCACCTTTTTCTTTCCTGCTTCTCTCTTCTACCATTGAGCACAAGGCCTATGCCATCGACCCAAGATTAGAGGCAGCCAGATAAAACTTATTGAAACAACAAAAGATAGAGCTTTCTTCATCGCCCTACAATGGTCATCTCTGCCATGTCTGATTAAGAGCTTCTATGGTCTTCTTAATGTCTTCTTGAACCACAATTTCTTCACCGAAATCAGAATAGATGACTAGTTCCAAGGTATCTCTTTTCATTTCTTTCCTTTCCCCCAAAAGAACCAATATAGTGTGATTGGGGGACATTAAGGAGAGCTGATGAAAATTTACGAGCATGTAGTTACTGATTCATATTTGAAGGGGATTGGAAAGTTGGTTCGGAATAATGTATCAAATTGTATATTTGTCAACATCACAAGCATGTAGTGATGTTCAAACTAGCCCATTGCTGCTGCCAAACTATCTGACAGTTATTATGGGATTCTCTTTACTTTGGACTTCATTCAGAATTGCTCAAGTATGAGAGAATGAACTCAATTTTGATGGTAGGTTATTGATCGATGAAACATACTCATTCCCTTGCTCTCAATCATCATTATACTGTAATGTAGTTTCTGTAGCTTCTTTGTTTCCGTTGCTGACCTAAGTAGCTCCACGAGCAGGAGCTAAAGAAGAAAAGAAAAGTAGCTCCACGGCAAACCTATGGAAATAAATATTCAAACTACTGGGTATTTTTCTGAAGCACAACACATTATACCATATTCAAATGGATAATAATTGGGGGTTGTAGACAAGGTGCTTTGCAAAGTTCACAGCATGGGGCATGGGCAATTGGCTGTCAAGGGTCGAGTATTAGTTCAATACCTTGTACTACGTAACTCCAAACTCTACCATTTTCAACTCGTGGTTTGTTAAGGTCTGTTAAGACCCTAATATCTTAACAAGCACAATAGAACTAATATTGAAAAGATGATAAACGGAACAAACAAGAACACTATATTGATAATAGATAGAGGGTTACAATACCATACCCTTAGCCTTTCGAGAGGGCTACACTCTCCCACCTTGTTGAACAAGACAACAAGGCAATACCAAAATATTTTTCTTCTTACAAAAGACCCTAAGACTCCTATTTATACTAAAACCCTTACATGCTAATTACTATTCTACCCTTACATATAATATACCCATCCTACCCTTAGTACTCTATCAAGGTCATCTCTTGTCAACTTATGTAAAGGCTGCCTATTGTCAACTTTTGTATCAATGCATTGGGAGAATGATAAGAGTAGAAATTCACCTGTGCATTTAACATATTTTAAGAAGATTTATCGCTAGTTAAGTAGGGAATGTGGAGATATTTCTAAAGGGAGCTACTTGAGTAGAGAGCAGCTGAGAAAGTGATGCAAGTGTGAGAATGTAAACATGTCATGTGTGAACGTGAGCTCACTTCACCGTTTATAGTAAACAGGAAGAGCTGAAGCTTAGGTGGCTTAGATACCGAGCATAAGTAGTTCATGCATAAAACTATAAAAGGACGTATTTAGTATGCATCACTATAGAGTATCTTAGCATTTTGGATCAACTTTCTTCAATTTATATGTATATGTAATGAAATGGAAGAAACTTTAAAGATTTTATGATGCTCGAATTGTTTTCTAAACTGTCGTAGCCTCTTCACTACTGCAAATGAGCAGTTTGTTCAGATCTTTAAAATATTTCTCCATTAAAATAAAAGTAGAATGAAACAGACTTAATTGGCAAAGTGATAAATTTGTTTGAACTTCAAAAATACTACTTTCTTAGGACTCTCAAAAAGTGAAACTATCTGATGCAGTGCCTTCCAGGCTAATATTATATTTCACATGTTTAGTTAGTTACCTTGTTTCATATCTTTACCTTCCTTGTTTAGTGGATTAGGTAGTTTGTTGTTTGTTAAGTGCTGTGTTATTGTAGGTTAATTGGCATTAAGTGCTTTGCCTTTGTATGCATTCACTACTTTTGAATTGAATAATGATTTCTTGCGAGTGTTCTTCGAGAGGCTCCTTGATTGCATTACTGTCATTATTGTCAAGTGAATCAAGTTTCTTCAATGGTTTAGGTGGCAAAAAGATTAGAGAAGACATCAAGGTACTTTAAGAGGTTGGGTAATCTTGGATTTTGGGGACAGTTGGTGTGCACTATCGTATCTGCAGTAATTCTTTCATTTTCTGTTGTCATCACCGGTAAAATCACATCCCCTGCCACCTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTATTCTGGTCCTTCGGTTACATTCGGCTTGCGGATAAGCTTCAACGGACTGCAAATCAACCCTCCAAGGTATATTATAATCCTACATTCTGTGTTTTCTGATTGTTCCCTCATCCTTTTATATGAAAACGACAAAATGTCATTCATTCATCCAATTTTATTGGGTTATCCTATTAAAAATAGAACTTATGTTATGTTATGAGATTCATCTATTTGACAATGAAAAAAGAAGACATGGATATTGCCACTTGATTCTTTCGTATTTTGTAATGACTTTAAAAGGTTTCAATCTTCATCACATTTCATAGTAGTATTGTTCTATCCTAAGATAAATATGGTAAAATTCAGGATCTGCCATTTTGGTGCCTCACCGAGAGTTTGGACATGGTAAATCCTCGGGAATTACTAACATCTGCGAATTTATATGCTACTATTTATTTCTTTACTCAATAAAATTCAACCTTTTGACTCAAAAAAAAAAAAAAAAAATAGTAATCAACCTTTCCTTACACAGTTATTTGTTTAACAATTTAGTTCTTAGAATGCAACTTTGTCTGTATTCAGCTTTTAACATGCTTCCTTTCCTTAGTTCCTCTATCATTTATTTTTACGTAGTTTTGCTGCTAAACATGAGCATGTGTCGAATAAAGTAGAAAATTGACAAACTCATGTCTCCACATTTTATTTGTTAATCCCAATTTCAGGCTCCTCCTCGAGCGGATGTTGTGAATAGCCTTAAAAATGGAATAGTTGTGAATATTCTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACAGTGGGGTTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAGTTCCATATTACCAGGGAGCCTCTCCTGGGAATAGCCCTGTTCTTGCTTTGGATGTATTCTTAGTACAGGTATGTTTTTCTTCTCAAGGATTATTATTTTTCTGAAGAACGTAAAAGATCCTCTGATTTTGGACTCGGTGATACCGTGATAGACTGTACATGCAAAAAATAAGGTTGAAACTTGGTAGAACTGGTATGCTAAAAAAGGGTCTGTTGTTGAATTCCAATGCTGCCTTTAATTGATAGAATATGTTAAATAGGTCTTAGGCTGCAATTTAGAGTGCTTTTAACATTGACAAAGTGAATGTAAGATAATTTGTATTGATTGCTAGAGCATATCCTTTTACTTCTTCTGTAACTACTGGAAATCAGGGTAGTGTAAAGGTATTTACGTTCTTTTAGAAAGAACAATACGAGCAAGGCTATTATTATTATGGTAGGTGAAGATTGGGAGCAACCAAGAACAGGAAAGCTGGTAGAGGCCTAGATGCATATCAAAATGTGCCTTCGGAAAGGTGACCTTGTTGGTCAAGTGAGCTTAATTGTAAAATTTCTTATAGTCTCCGAGGTTCGGGCTCCGGGACGGGCGCGAGTGTTCCGAATATGTAGTGGGGCGAAGTTTGGATTCCCGGTTATAAAAAAAATGTGCATTCATTCTTGATGAGAGCATATTAGTTTGCCATTTAATGAATTTTTAACTTTCCTTTTTGCAGGCATCTGCGAACACTATCCTCTCTCATTTCCTGGGGCTCATTTTCTCATTGGAGCTACTACGCTCGGTGACGTTACCTGCTGCTGAGAGCATTCCTAATCCCCAAATAGCATGACCTCCACGTTGCCTTCAGCGGCGGCATCCGAGGCAACACGGTACGAGTCTTTTGCTCGTTTAGTGTCCATTTCGAGTATAATCAATGCCATTTGTTTTTGTGTTGTGACTATTCACTTTCATCTGATAGGGGTACTCTATTTTCTAGCGTGGGTGGAAAATCAAAAGCCTTTCTTGGTAGGGGGCTTAAATAGTTGCAGAGGTTCTTGAAGGTGTTTCCTGCGGGTAGATAAAATAAAAGTTTCTTGTATTGTATTAGAAGACTGCGTTATACATTTTTAATCTGTTCTCCATTTTAATATTTGTAATTTTTTTTAATGAAAAATAGATATATATTCTGTTTTC

mRNA sequence

GTTGGTTACAGATTTTAGAACCCTGCAAAACGCTTACAATTGTAGGATCCATCCACCATAGCATCTCCTCCCCCTGCAGATGCAGTCGCTTCTCTCGCCGGTAGCTCGCGGCGCCGCCGCCGTGTTTTCATCGGATTCACACCTCAGCCGCTTCCATCGCCACCCTTTCTCCGCACGCCAAGACATCAATCCCAATTCCCTCCCTTCACTTACTGCCATTTCATCATCTTCTTCTTCGTTGTTTCTTTTGAAGAAATTTGGTACTTTGAAGCATAGAATAAGAGCACGATTTTGGTCGGAAACGCGCGCTTCTTCTAGTTTCATTTCGCCGACGGCTCCCCAAAATGATGAGGGTGAAAGGGCCAAACTCGCTCAGGTGGCAAAAAGATTAGAGAAGACATCAAGGTACTTTAAGAGGTTGGGTAATCTTGGATTTTGGGGACAGTTGGTGTGCACTATCGTATCTGCAGTAATTCTTTCATTTTCTGTTGTCATCACCGGTAAAATCACATCCCCTGCCACCTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTATTCTGGTCCTTCGGTTACATTCGGCTTGCGGATAAGCTTCAACGGACTGCAAATCAACCCTCCAAGGCTCCTCCTCGAGCGGATGTTGTGAATAGCCTTAAAAATGGAATAGTTGTGAATATTCTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACAGTGGGGTTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAGTTCCATATTACCAGGGAGCCTCTCCTGGGAATAGCCCTGTTCTTGCTTTGGATGTATTCTTAGTACAGGCATCTGCGAACACTATCCTCTCTCATTTCCTGGGGCTCATTTTCTCATTGGAGCTACTACGCTCGGTGACGTTACCTGCTGCTGAGAGCATTCCTAATCCCCAAATAGCATGACCTCCACGTTGCCTTCAGCGGCGGCATCCGAGGCAACACGGGGTACTCTATTTTCTAGCGTGGGTGGAAAATCAAAAGCCTTTCTTGGTAGGGGGCTTAAATAGTTGCAGAGGTTCTTGAAGGTGTTTCCTGCGGGTAGATAAAATAAAAGTTTCTTGTATTGTATTAGAAGACTGCGTTATACATTTTTAATCTGTTCTCCATTTTAATATTTGTAATTTTTTTTAATGAAAAATAGATATATATTCTGTTTTC

Coding sequence (CDS)

ATGCAGTCGCTTCTCTCGCCGGTAGCTCGCGGCGCCGCCGCCGTGTTTTCATCGGATTCACACCTCAGCCGCTTCCATCGCCACCCTTTCTCCGCACGCCAAGACATCAATCCCAATTCCCTCCCTTCACTTACTGCCATTTCATCATCTTCTTCTTCGTTGTTTCTTTTGAAGAAATTTGGTACTTTGAAGCATAGAATAAGAGCACGATTTTGGTCGGAAACGCGCGCTTCTTCTAGTTTCATTTCGCCGACGGCTCCCCAAAATGATGAGGGTGAAAGGGCCAAACTCGCTCAGGTGGCAAAAAGATTAGAGAAGACATCAAGGTACTTTAAGAGGTTGGGTAATCTTGGATTTTGGGGACAGTTGGTGTGCACTATCGTATCTGCAGTAATTCTTTCATTTTCTGTTGTCATCACCGGTAAAATCACATCCCCTGCCACCTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTATTCTGGTCCTTCGGTTACATTCGGCTTGCGGATAAGCTTCAACGGACTGCAAATCAACCCTCCAAGGCTCCTCCTCGAGCGGATGTTGTGAATAGCCTTAAAAATGGAATAGTTGTGAATATTCTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACAGTGGGGTTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAGTTCCATATTACCAGGGAGCCTCTCCTGGGAATAGCCCTGTTCTTGCTTTGGATGTATTCTTAGTACAGGCATCTGCGAACACTATCCTCTCTCATTTCCTGGGGCTCATTTTCTCATTGGAGCTACTACGCTCGGTGACGTTACCTGCTGCTGAGAGCATTCCTAATCCCCAAATAGCATGA

Protein sequence

MQSLLSPVARGAAAVFSSDSHLSRFHRHPFSARQDINPNSLPSLTAISSSSSSLFLLKKFGTLKHRIRARFWSETRASSSFISPTAPQNDEGERAKLAQVAKRLEKTSRYFKRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLADKLQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKALTSSAVPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPNPQIA

Homology

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BLAST of Sed0013348 vs. NCBI nr
Match: XP_038888764.1 (protein TIC 21, chloroplastic [Benincasa hispida])

HSP 1 Score: 451.8 bits (1161), Expect = 4.4e-123
Identity = 251/300 (83.67%), Postives = 268/300 (89.33%), Query Frame = 0


Query: 1   MQSLLSPVAR-----GAAAVFSSDSHLSRFHRHPFSARQDIN----PNSLPSLTAI-SSS 60
           MQSLLSPVAR      AAAV+SSD HLSRFHR PFS R   N    PNSL S  A+ SSS
Sbjct: 1   MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSVRHSSNLNSPPNSLSSFNAVRSSS 60

Query: 61  SSSLFLLKKFGTLKHRIRARFWSETRASSSFISPTAPQNDEGERAKLAQVAKRLEKTSRY 120
           SSSL LLK FGTL+HR R +F+SET ASSS ISP  P NDE ++AKLAQVAKRLEKTS+Y
Sbjct: 61  SSSLLLLKTFGTLEHR-RGQFFSETHASSSPISPAVPPNDEADKAKLAQVAKRLEKTSKY 120

Query: 121 FKRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI 180
           FKRLG+LGFWGQLVCTIV+AVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI
Sbjct: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI 180

Query: 181 RLADKLQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKALTSSA 240
           RL+DKLQRTANQPSKAPPRADVVNSL+NGIVVN+LGMGAAILGMQATVGLLVAKALTSSA
Sbjct: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240

Query: 241 VPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPNPQIA 291
           +PYYQGASPGNSPVLALDVFLVQASANTILSHFLGL+FSLELLRSVTLPA +SIP P+IA
Sbjct: 241 IPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRIA 299

[Close]

BLAST of Sed0013348 vs. NCBI nr
Match: XP_022148850.1 (protein TIC 21, chloroplastic [Momordica charantia])

HSP 1 Score: 447.6 bits (1150), Expect = 8.3e-122
Identity = 255/304 (83.88%), Postives = 267/304 (87.83%), Query Frame = 0


Query: 1   MQSLLSPVA----RGAAAVFSSDSHLSRFHRHPFSARQDIN----PNSLPSLTAI----- 60
           MQSLLSPVA      AAAV+SSD HLSRFHR P S R   N    PNS+PS+ AI     
Sbjct: 1   MQSLLSPVAPAGPYSAAAVYSSDLHLSRFHRLPLSLRHASNLNSPPNSIPSVNAIRSSYS 60

Query: 61  -SSSSSSLFLLKKFGTLKHRIRARFWSETRASSSFISPTAPQNDEGERAKLAQVAKRLEK 120
            SSSSSSL +LK FGTL +R R  F SETRASSS ISPTAP NDE E+AKLAQVAKRLEK
Sbjct: 61  SSSSSSSLLILKAFGTLGNR-RGLFCSETRASSSPISPTAPPNDEAEKAKLAQVAKRLEK 120

Query: 121 TSRYFKRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWS 180
           TSRYFKRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAG IVAAFISVFWS
Sbjct: 121 TSRYFKRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGSIVAAFISVFWS 180

Query: 181 FGYIRLADKLQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKAL 240
           FGYIRL+DKL RTANQPSKAPPRADVVNSL+NGIVVN+LGMGAAILGMQATVGLLVAKAL
Sbjct: 181 FGYIRLSDKLLRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKAL 240

Query: 241 TSSAVPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPN 291
           TSSA+PYYQGASPGNSPVLALDVFLVQASANTILSHFLGL+FSLELLRSVTLPAAESIP 
Sbjct: 241 TSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPAAESIPI 300

[Close]

BLAST of Sed0013348 vs. NCBI nr
Match: XP_022952785.1 (protein TIC 21, chloroplastic [Cucurbita moschata])

HSP 1 Score: 444.9 bits (1143), Expect = 5.4e-121
Identity = 249/299 (83.28%), Postives = 265/299 (88.63%), Query Frame = 0


Query: 1   MQSLLSPVARG----AAAVFSSDSHLSRFHRHPFSARQDIN----PNSLPSLTAISSSSS 60
           MQSLLSPV RG     AAV++S+ HLS F+R PFS R   N    PNSLPS +AI   SS
Sbjct: 1   MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSS 60

Query: 61  -SLFLLKKFGTLKHRIRARFWSETRASSSFISPTAPQNDEGERAKLAQVAKRLEKTSRYF 120
            SL LLK FGTL+HR R +F S+T ASSS ISPT P NDE E+AKLAQVAKRLEKTSRYF
Sbjct: 61  FSLLLLKNFGTLEHR-RGQFCSDTCASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120

Query: 121 KRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
           KRLGNLGFWGQLVCTIV+AVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180

Query: 181 LADKLQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKALTSSAV 240
           L+DKLQRTANQPSKAPPRADVVNSLKNGIVVN+LGMGAAILGMQATVGLLVAKALTSSA+
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240

Query: 241 PYYQGASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPNPQIA 291
           PYYQGASPGNSPVLALDVFLVQASANTILSHFLGL+FSLELLRSVTLPA ESIP P+IA
Sbjct: 241 PYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRIA 298

[Close]

BLAST of Sed0013348 vs. NCBI nr
Match: XP_004136957.1 (protein TIC 21, chloroplastic [Cucumis sativus] >KGN43879.1 hypothetical protein Csa_017075 [Cucumis sativus])

HSP 1 Score: 443.4 bits (1139), Expect = 1.6e-120
Identity = 246/295 (83.39%), Postives = 261/295 (88.47%), Query Frame = 0


Query: 1   MQSLLSPVAR-----GAAAVFSSDSHLSRFHRHPFSARQDINPNSLPSLTAISSSSSSLF 60
           MQSLLSPVAR       AAV+SSD HLSRFHR P S R     NSLP  +AI SSSSSL 
Sbjct: 1   MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSF--NSLPPFSAIPSSSSSLL 60

Query: 61  LLKKFGTLKHRIRARFWSETRASSSFISPTAPQNDEGERAKLAQVAKRLEKTSRYFKRLG 120
           LLK FGTLKH  R +  SETRASSS ISPT   NDE E+AKLAQVAKRLEKTS+YFKRLG
Sbjct: 61  LLKTFGTLKHS-RGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFKRLG 120

Query: 121 NLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLADK 180
           +LGFWGQLVCTIV+AVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRL+DK
Sbjct: 121 SLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDK 180

Query: 181 LQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKALTSSAVPYYQ 240
           LQRTANQPSKAPPRADVVNSL+NGIVVN+LGMGAAILGMQATVGLLVAKALTSSA+PYYQ
Sbjct: 181 LQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQ 240

Query: 241 GASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPNPQIA 291
            ASPGNSPVLALDVFLVQASANTILSHFLGL+FSLELLRSVTLPA +SIP P++A
Sbjct: 241 AASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 292

[Close]

BLAST of Sed0013348 vs. NCBI nr
Match: XP_008454999.1 (PREDICTED: protein TIC 21, chloroplastic [Cucumis melo] >KAA0031341.1 protein TIC 21 [Cucumis melo var. makuwa] >TYK06794.1 protein TIC 21 [Cucumis melo var. makuwa])

HSP 1 Score: 441.8 bits (1135), Expect = 4.5e-120
Identity = 249/303 (82.18%), Postives = 263/303 (86.80%), Query Frame = 0


Query: 1   MQSLLSPVAR-----GAAAVFSSDSHLSRFHRHPFSARQDINPNSLPSLTAI-------- 60
           MQSLLSPVAR       AAV+SSD HLSR HR PFS R     NSLP  +AI        
Sbjct: 1   MQSLLSPVARTGPFPPTAAVYSSDFHLSRLHRRPFSVRHSF--NSLPQFSAISSSSSSSS 60

Query: 61  SSSSSSLFLLKKFGTLKHRIRARFWSETRASSSFISPTAPQNDEGERAKLAQVAKRLEKT 120
           SSSSSSL LLK FGTL+HR R +  SETRASSS ISPT P NDE E+AKLAQVAKRLEKT
Sbjct: 61  SSSSSSLLLLKTFGTLEHR-RGQLCSETRASSSPISPTVPPNDEAEKAKLAQVAKRLEKT 120

Query: 121 SRYFKRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSF 180
           SRYFKRLG+LGFWGQLVCTIV+AVILSFSVVITGKI SPATFYATAGGIVAAFISVFWSF
Sbjct: 121 SRYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKIASPATFYATAGGIVAAFISVFWSF 180

Query: 181 GYIRLADKLQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKALT 240
           GYIRL+DKLQRTANQPSKAPPRADVVNSL+NGIVVN+LGMGAAILGMQATVGLLVAKALT
Sbjct: 181 GYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALT 240

Query: 241 SSAVPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPNP 291
           SSA+PYYQ ASPGNSPVLALDVFLVQASANTILSHFLGL+FSLELLRSVTLPA +SIP P
Sbjct: 241 SSAIPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIP 300

[Close]

BLAST of Sed0013348 vs. ExPASy Swiss-Prot
Match: Q9SHU7 (Protein TIC 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC21 PE=1 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.5e-81
Identity = 182/296 (61.49%), Postives = 219/296 (73.99%), Query Frame = 0


Query: 1   MQSLLSPVA--RGAAAVFSSDSHLSRFHRHPFSARQ--DINPNSL-PSLTAISSSSSSLF 60
           MQSLL P A   G +AV         F+    S R     NP  L P      SS  S  
Sbjct: 1   MQSLLLPPASSSGVSAVALRPGFQHSFNHQSLSTRSLPLFNPLLLAPKKKTTISSYQSPP 60

Query: 61  LLKKFGTLKHRIRARFWSETRASSSFISPTA-PQNDEGERAKLAQVAKRLEKTSRYFKRL 120
            L  +G      +  F   T A S   SP++ P ++E ++AKLAQVAKRLEKTSRYFKRL
Sbjct: 61  SLSVYGFQIGGSKPSFTPSTVAFSYPTSPSSVPGDNEVDKAKLAQVAKRLEKTSRYFKRL 120

Query: 121 GNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLAD 180
           G++GFWGQLV T+V+AVILSFS+V+TGK TSPATFYATA GI AAF+SVFWSFGYIRL++
Sbjct: 121 GSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAFVSVFWSFGYIRLSE 180

Query: 181 KLQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKALTSSAVPYY 240
           +L+RT+  P+KAPPRADVV  L++GI+VNILGMG+A+LGMQATVG LVAKALT+SA P+Y
Sbjct: 181 RLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGFLVAKALTTSANPFY 240

Query: 241 QGASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPNPQIA 291
           QG S G SPVLALDVFLVQASANT+LSHFLGL+ SLELLRSVT+P +ES+  P++A
Sbjct: 241 QGVSQGYSPVLALDVFLVQASANTLLSHFLGLVCSLELLRSVTVPNSESVVVPKVA 296

[Close]

BLAST of Sed0013348 vs. ExPASy TrEMBL
Match: A0A6J1D437 (protein TIC 21, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017409 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 4.0e-122
Identity = 255/304 (83.88%), Postives = 267/304 (87.83%), Query Frame = 0


Query: 1   MQSLLSPVA----RGAAAVFSSDSHLSRFHRHPFSARQDIN----PNSLPSLTAI----- 60
           MQSLLSPVA      AAAV+SSD HLSRFHR P S R   N    PNS+PS+ AI     
Sbjct: 1   MQSLLSPVAPAGPYSAAAVYSSDLHLSRFHRLPLSLRHASNLNSPPNSIPSVNAIRSSYS 60

Query: 61  -SSSSSSLFLLKKFGTLKHRIRARFWSETRASSSFISPTAPQNDEGERAKLAQVAKRLEK 120
            SSSSSSL +LK FGTL +R R  F SETRASSS ISPTAP NDE E+AKLAQVAKRLEK
Sbjct: 61  SSSSSSSLLILKAFGTLGNR-RGLFCSETRASSSPISPTAPPNDEAEKAKLAQVAKRLEK 120

Query: 121 TSRYFKRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWS 180
           TSRYFKRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAG IVAAFISVFWS
Sbjct: 121 TSRYFKRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGSIVAAFISVFWS 180

Query: 181 FGYIRLADKLQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKAL 240
           FGYIRL+DKL RTANQPSKAPPRADVVNSL+NGIVVN+LGMGAAILGMQATVGLLVAKAL
Sbjct: 181 FGYIRLSDKLLRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKAL 240

Query: 241 TSSAVPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPN 291
           TSSA+PYYQGASPGNSPVLALDVFLVQASANTILSHFLGL+FSLELLRSVTLPAAESIP 
Sbjct: 241 TSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPAAESIPI 300

[Close]

BLAST of Sed0013348 vs. ExPASy TrEMBL
Match: A0A6J1GMQ4 (protein TIC 21, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455377 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.6e-121
Identity = 249/299 (83.28%), Postives = 265/299 (88.63%), Query Frame = 0


Query: 1   MQSLLSPVARG----AAAVFSSDSHLSRFHRHPFSARQDIN----PNSLPSLTAISSSSS 60
           MQSLLSPV RG     AAV++S+ HLS F+R PFS R   N    PNSLPS +AI   SS
Sbjct: 1   MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSS 60

Query: 61  -SLFLLKKFGTLKHRIRARFWSETRASSSFISPTAPQNDEGERAKLAQVAKRLEKTSRYF 120
            SL LLK FGTL+HR R +F S+T ASSS ISPT P NDE E+AKLAQVAKRLEKTSRYF
Sbjct: 61  FSLLLLKNFGTLEHR-RGQFCSDTCASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120

Query: 121 KRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
           KRLGNLGFWGQLVCTIV+AVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180

Query: 181 LADKLQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKALTSSAV 240
           L+DKLQRTANQPSKAPPRADVVNSLKNGIVVN+LGMGAAILGMQATVGLLVAKALTSSA+
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240

Query: 241 PYYQGASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPNPQIA 291
           PYYQGASPGNSPVLALDVFLVQASANTILSHFLGL+FSLELLRSVTLPA ESIP P+IA
Sbjct: 241 PYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRIA 298

[Close]

BLAST of Sed0013348 vs. ExPASy TrEMBL
Match: A0A0A0K4J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071680 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 7.5e-121
Identity = 246/295 (83.39%), Postives = 261/295 (88.47%), Query Frame = 0


Query: 1   MQSLLSPVAR-----GAAAVFSSDSHLSRFHRHPFSARQDINPNSLPSLTAISSSSSSLF 60
           MQSLLSPVAR       AAV+SSD HLSRFHR P S R     NSLP  +AI SSSSSL 
Sbjct: 1   MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSF--NSLPPFSAIPSSSSSLL 60

Query: 61  LLKKFGTLKHRIRARFWSETRASSSFISPTAPQNDEGERAKLAQVAKRLEKTSRYFKRLG 120
           LLK FGTLKH  R +  SETRASSS ISPT   NDE E+AKLAQVAKRLEKTS+YFKRLG
Sbjct: 61  LLKTFGTLKHS-RGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFKRLG 120

Query: 121 NLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLADK 180
           +LGFWGQLVCTIV+AVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRL+DK
Sbjct: 121 SLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDK 180

Query: 181 LQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKALTSSAVPYYQ 240
           LQRTANQPSKAPPRADVVNSL+NGIVVN+LGMGAAILGMQATVGLLVAKALTSSA+PYYQ
Sbjct: 181 LQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQ 240

Query: 241 GASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPNPQIA 291
            ASPGNSPVLALDVFLVQASANTILSHFLGL+FSLELLRSVTLPA +SIP P++A
Sbjct: 241 AASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 292

[Close]

BLAST of Sed0013348 vs. ExPASy TrEMBL
Match: A0A5A7SP50 (Protein TIC 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00960 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 2.2e-120
Identity = 249/303 (82.18%), Postives = 263/303 (86.80%), Query Frame = 0


Query: 1   MQSLLSPVAR-----GAAAVFSSDSHLSRFHRHPFSARQDINPNSLPSLTAI-------- 60
           MQSLLSPVAR       AAV+SSD HLSR HR PFS R     NSLP  +AI        
Sbjct: 1   MQSLLSPVARTGPFPPTAAVYSSDFHLSRLHRRPFSVRHSF--NSLPQFSAISSSSSSSS 60

Query: 61  SSSSSSLFLLKKFGTLKHRIRARFWSETRASSSFISPTAPQNDEGERAKLAQVAKRLEKT 120
           SSSSSSL LLK FGTL+HR R +  SETRASSS ISPT P NDE E+AKLAQVAKRLEKT
Sbjct: 61  SSSSSSLLLLKTFGTLEHR-RGQLCSETRASSSPISPTVPPNDEAEKAKLAQVAKRLEKT 120

Query: 121 SRYFKRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSF 180
           SRYFKRLG+LGFWGQLVCTIV+AVILSFSVVITGKI SPATFYATAGGIVAAFISVFWSF
Sbjct: 121 SRYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKIASPATFYATAGGIVAAFISVFWSF 180

Query: 181 GYIRLADKLQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKALT 240
           GYIRL+DKLQRTANQPSKAPPRADVVNSL+NGIVVN+LGMGAAILGMQATVGLLVAKALT
Sbjct: 181 GYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALT 240

Query: 241 SSAVPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPNP 291
           SSA+PYYQ ASPGNSPVLALDVFLVQASANTILSHFLGL+FSLELLRSVTLPA +SIP P
Sbjct: 241 SSAIPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIP 300

[Close]

BLAST of Sed0013348 vs. ExPASy TrEMBL
Match: A0A1S3C0L3 (protein TIC 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495279 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 2.2e-120
Identity = 249/303 (82.18%), Postives = 263/303 (86.80%), Query Frame = 0


Query: 1   MQSLLSPVAR-----GAAAVFSSDSHLSRFHRHPFSARQDINPNSLPSLTAI-------- 60
           MQSLLSPVAR       AAV+SSD HLSR HR PFS R     NSLP  +AI        
Sbjct: 1   MQSLLSPVARTGPFPPTAAVYSSDFHLSRLHRRPFSVRHSF--NSLPQFSAISSSSSSSS 60

Query: 61  SSSSSSLFLLKKFGTLKHRIRARFWSETRASSSFISPTAPQNDEGERAKLAQVAKRLEKT 120
           SSSSSSL LLK FGTL+HR R +  SETRASSS ISPT P NDE E+AKLAQVAKRLEKT
Sbjct: 61  SSSSSSLLLLKTFGTLEHR-RGQLCSETRASSSPISPTVPPNDEAEKAKLAQVAKRLEKT 120

Query: 121 SRYFKRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSF 180
           SRYFKRLG+LGFWGQLVCTIV+AVILSFSVVITGKI SPATFYATAGGIVAAFISVFWSF
Sbjct: 121 SRYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKIASPATFYATAGGIVAAFISVFWSF 180

Query: 181 GYIRLADKLQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKALT 240
           GYIRL+DKLQRTANQPSKAPPRADVVNSL+NGIVVN+LGMGAAILGMQATVGLLVAKALT
Sbjct: 181 GYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALT 240

Query: 241 SSAVPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPNP 291
           SSA+PYYQ ASPGNSPVLALDVFLVQASANTILSHFLGL+FSLELLRSVTLPA +SIP P
Sbjct: 241 SSAIPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIP 300

[Close]

BLAST of Sed0013348 vs. TAIR 10
Match: AT2G15290.1 (translocon at inner membrane of chloroplasts 21 )

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-82
Identity = 182/296 (61.49%), Postives = 219/296 (73.99%), Query Frame = 0


Query: 1   MQSLLSPVA--RGAAAVFSSDSHLSRFHRHPFSARQ--DINPNSL-PSLTAISSSSSSLF 60
           MQSLL P A   G +AV         F+    S R     NP  L P      SS  S  
Sbjct: 1   MQSLLLPPASSSGVSAVALRPGFQHSFNHQSLSTRSLPLFNPLLLAPKKKTTISSYQSPP 60

Query: 61  LLKKFGTLKHRIRARFWSETRASSSFISPTA-PQNDEGERAKLAQVAKRLEKTSRYFKRL 120
            L  +G      +  F   T A S   SP++ P ++E ++AKLAQVAKRLEKTSRYFKRL
Sbjct: 61  SLSVYGFQIGGSKPSFTPSTVAFSYPTSPSSVPGDNEVDKAKLAQVAKRLEKTSRYFKRL 120

Query: 121 GNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLAD 180
           G++GFWGQLV T+V+AVILSFS+V+TGK TSPATFYATA GI AAF+SVFWSFGYIRL++
Sbjct: 121 GSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAFVSVFWSFGYIRLSE 180

Query: 181 KLQRTANQPSKAPPRADVVNSLKNGIVVNILGMGAAILGMQATVGLLVAKALTSSAVPYY 240
           +L+RT+  P+KAPPRADVV  L++GI+VNILGMG+A+LGMQATVG LVAKALT+SA P+Y
Sbjct: 181 RLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGFLVAKALTTSANPFY 240

Query: 241 QGASPGNSPVLALDVFLVQASANTILSHFLGLIFSLELLRSVTLPAAESIPNPQIA 291
           QG S G SPVLALDVFLVQASANT+LSHFLGL+ SLELLRSVT+P +ES+  P++A
Sbjct: 241 QGVSQGYSPVLALDVFLVQASANTLLSHFLGLVCSLELLRSVTVPNSESVVVPKVA 296

The following BLAST results are available for this feature:

BLAST of Sed0013348 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888764.1	4.4e-123	83.67	protein TIC 21, chloroplastic [Benincasa hispida]	[more]
XP_022148850.1	8.3e-122	83.88	protein TIC 21, chloroplastic [Momordica charantia]	[more]
XP_022952785.1	5.4e-121	83.28	protein TIC 21, chloroplastic [Cucurbita moschata]	[more]
XP_004136957.1	1.6e-120	83.39	protein TIC 21, chloroplastic [Cucumis sativus] >KGN43879.1 hypothetical protein...	[more]
XP_008454999.1	4.5e-120	82.18	PREDICTED: protein TIC 21, chloroplastic [Cucumis melo] >KAA0031341.1 protein TI...	[more]

BLAST of Sed0013348 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHU7	2.5e-81	61.49	Protein TIC 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC21 PE=1 SV=1	[more]

BLAST of Sed0013348 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D437	4.0e-122	83.88	protein TIC 21, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017409 PE=...	[more]
A0A6J1GMQ4	2.6e-121	83.28	protein TIC 21, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455377 PE=4...	[more]
A0A0A0K4J8	7.5e-121	83.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071680 PE=4 SV=1	[more]
A0A5A7SP50	2.2e-120	82.18	Protein TIC 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00960 ...	[more]
A0A1S3C0L3	2.2e-120	82.18	protein TIC 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495279 PE=4 SV=1	[more]

BLAST of Sed0013348 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15290.1	1.8e-82	61.49	translocon at inner membrane of chloroplasts 21	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022051	Protein of unknown function DUF3611	PFAM	PF12263	DUF3611	coord: 102..276 e-value: 1.7E-54 score: 184.4
IPR022051	Protein of unknown function DUF3611	PANTHER	PTHR34548	PROTEIN TIC 21, CHLOROPLASTIC	coord: 1..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013348.1	Sed0013348.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane