Sed0013309 (gene) Chayote v1

Overview


Name	Sed0013309
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Sec-independent protein translocase protein TATC
Location	LG03: 10876186 .. 10877499 (-)
RNA-Seq Expression	Sed0013309
Synteny	Sed0013309

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATATCTCCAAATAAAATAATTAAAAAAGTAGCCGTTGCCGTTCAACAAGAACTATAAAGAGACCCATCCAAAACGAAACGCCCATTAAACCTTCTCATTCAAGAATCCCCAAATTTCATAATGGGTTGCTGAAAATCCTTTTGGATCAATTGGATATATAATAATTCATATATTAACTTCTCTGATTTTTCCTTTTTTGTTTTTTAAACAAATCCCACTTTTCAATTTTTTCCATTAATTTGGTTGTAAATTTTAACAGAAATTTTTCACTTAAATTGGGATTTTTTTTTTTTTTTTTCCTGGGGCTTGTTGATATTGTGTTTTATAATTTGAATTTTTCAGGTTCAGATCTTTGTAGCAATGAAGGCAGTTTTGATTCCATTTCCTCCCAAGCAATCTCGCAATTTAAAACCCCTTAATTTCTCTCCGGCTGCCGTGCACGGCGGTCTTCTCAAATCCCCTCCACCAGCCGTCGCGTTTAACACCCACCGCCACCGCCAGCAACCGCCTCTTCTCCCTTTTCCCCGCCGTCCCTTTCCTCCTCCGGTGGCCGGAGCTCAGCCGTCGTTCCGCTCAAAGGTTGTGAGATCCAGAGACCAATCTCTTACCCCCAAGAAGCAAAAACCAAATAAACGAATTAGCGTCCCACCGGAGGTGAAACCGCCGGCGGAGACGACGGCGGAGCTTGTGATCGTTGATTCTACGAACCGACTGGGGCCGGAACCTAACGATGTTCCTAAAGACTTATGGAAAGGTTTAGGACTACGGTCGCCGGCGCCGCCGTGTGAAGGTAGCAGGAATTTGGAAATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCGCCGAGCAGCTTGCCGCTTCCGAAATTCCCTCTGATGCGGAAGCTGAATTGTAATGTGGAGGCTGCTGCCGGAGTAGACGTCGGAGCCACCGTCAATCTCCGGCGACTTTTACGCCTCCGATGAAGTGGCAAGAATGGGCCGTTTGAAAAAAAAAAAAAAAAAATTTAAGCTTCCTTATGCTAGTTTGTTTGTGTTTGTTTTTTTTTTTTTTTTTGAAATGTCCTGTTTGTTTGTGATCACCACTTGGGTTTTTCTTTAAAATGGGGTGCACAAACTTGAGCTTGAACAAGATCTCCACTAGTTTTATCGTTGAAAGGAGATTGATTTATGTATAGATGTATTTAACTGTAACTGTGTAGTCCAGGAGATTAATTTGGTTATGCTTTTAGTAAAATGGAGTTTGTAAGTCTACCAATAATTTGGGTATTATTGTCATTTATGAAATTACCTAAAAGGGTTTTTCTT

mRNA sequence

AAAATATCTCCAAATAAAATAATTAAAAAAGTAGCCGTTGCCGTTCAACAAGAACTATAAAGAGACCCATCCAAAACGAAACGCCCATTAAACCTTCTCATTCAAGAATCCCCAAATTTCATAATGGGTTGCTGAAAATCCTTTTGGATCAATTGGATATATAATAATTCATATATTAACTTCTCTGATTTTTCCTTTTTTGTTTTTTAAACAAATCCCACTTTTCAATTTTTTCCATTAATTTGGTTGTAAATTTTAACAGAAATTTTTCACTTAAATTGGGATTTTTTTTTTTTTTTTTCCTGGGGCTTGTTGATATTGTGTTTTATAATTTGAATTTTTCAGGTTCAGATCTTTGTAGCAATGAAGGCAGTTTTGATTCCATTTCCTCCCAAGCAATCTCGCAATTTAAAACCCCTTAATTTCTCTCCGGCTGCCGTGCACGGCGGTCTTCTCAAATCCCCTCCACCAGCCGTCGCGTTTAACACCCACCGCCACCGCCAGCAACCGCCTCTTCTCCCTTTTCCCCGCCGTCCCTTTCCTCCTCCGGTGGCCGGAGCTCAGCCGTCGTTCCGCTCAAAGGTTGTGAGATCCAGAGACCAATCTCTTACCCCCAAGAAGCAAAAACCAAATAAACGAATTAGCGTCCCACCGGAGGTGAAACCGCCGGCGGAGACGACGGCGGAGCTTGTGATCGTTGATTCTACGAACCGACTGGGGCCGGAACCTAACGATGTTCCTAAAGACTTATGGAAAGGTTTAGGACTACGGTCGCCGGCGCCGCCGTGTGAAGGTAGCAGGAATTTGGAAATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCGCCGAGCAGCTTGCCGCTTCCGAAATTCCCTCTGATGCGGAAGCTGAATTGTAATGTGGAGGCTGCTGCCGGAGTAGACGTCGGAGCCACCGTCAATCTCCGGCGACTTTTACGCCTCCGATGAAGTGGCAAGAATGGGCCGTTTGAAAAAAAAAAAAAAAAAATTTAAGCTTCCTTATGCTAGTTTGTTTGTGTTTGTTTTTTTTTTTTTTTTTGAAATGTCCTGTTTGTTTGTGATCACCACTTGGGTTTTTCTTTAAAATGGGGTGCACAAACTTGAGCTTGAACAAGATCTCCACTAGTTTTATCGTTGAAAGGAGATTGATTTATGTATAGATGTATTTAACTGTAACTGTGTAGTCCAGGAGATTAATTTGGTTATGCTTTTAGTAAAATGGAGTTTGTAAGTCTACCAATAATTTGGGTATTATTGTCATTTATGAAATTACCTAAAAGGGTTTTTCTT

Coding sequence (CDS)

ATGAAGGCAGTTTTGATTCCATTTCCTCCCAAGCAATCTCGCAATTTAAAACCCCTTAATTTCTCTCCGGCTGCCGTGCACGGCGGTCTTCTCAAATCCCCTCCACCAGCCGTCGCGTTTAACACCCACCGCCACCGCCAGCAACCGCCTCTTCTCCCTTTTCCCCGCCGTCCCTTTCCTCCTCCGGTGGCCGGAGCTCAGCCGTCGTTCCGCTCAAAGGTTGTGAGATCCAGAGACCAATCTCTTACCCCCAAGAAGCAAAAACCAAATAAACGAATTAGCGTCCCACCGGAGGTGAAACCGCCGGCGGAGACGACGGCGGAGCTTGTGATCGTTGATTCTACGAACCGACTGGGGCCGGAACCTAACGATGTTCCTAAAGACTTATGGAAAGGTTTAGGACTACGGTCGCCGGCGCCGCCGTGTGAAGGTAGCAGGAATTTGGAAATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCGCCGAGCAGCTTGCCGCTTCCGAAATTCCCTCTGATGCGGAAGCTGAATTGTAATGTGGAGGCTGCTGCCGGAGTAGACGTCGGAGCCACCGTCAATCTCCGGCGACTTTTACGCCTCCGATGA

Protein sequence

MKAVLIPFPPKQSRNLKPLNFSPAAVHGGLLKSPPPAVAFNTHRHRQQPPLLPFPRRPFPPPVAGAQPSFRSKVVRSRDQSLTPKKQKPNKRISVPPEVKPPAETTAELVIVDSTNRLGPEPNDVPKDLWKGLGLRSPAPPCEGSRNLEMEFSGSAFSVSPPPSSLPLPKFPLMRKLNCNVEAAAGVDVGATVNLRRLLRLR

Homology

[Close]

BLAST of Sed0013309 vs. NCBI nr
Match: XP_023546813.1 (proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.8 bits (673), Expect = 1.2e-66
Identity = 140/202 (69.31%), Postives = 156/202 (77.23%), Query Frame = 0


Query: 1   MKAVLIPFPPKQSRNLKPLNFSPAAVHGGLLKSPPPAVAFNTHRHRQQPPLLPFPRRPFP 60
           M+AVLIPF  ++SR+LK  NFSPA VH GLL  PPPAV   +HRH QQPPLLP PRRPFP
Sbjct: 1   MEAVLIPFSAERSRSLKSCNFSPATVHDGLLNVPPPAVPNYSHRHHQQPPLLPLPRRPFP 60

Query: 61  PPVAGAQPSFRSKVVRSRDQSLTPKKQKPNKRISVPPEVKPPAETTAELVIVDSTNRLGP 120
           P   GA PS R K  +SRDQSLTPKK KP KR   PP +K    +TAE +IVDSTNRLGP
Sbjct: 61  PTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK----STAEFMIVDSTNRLGP 120

Query: 121 EPNDVPKDLWKGLGLRSPAPPCEGSRNLEMEFSGSAFSVSPPPSSLPLPKFPLMRKLNCN 180
           EP+ VPKDLW+ LGLRS APP EG R+ E EFSGS F VSPPPSS+PLPKF L R+++CN
Sbjct: 121 EPSHVPKDLWRVLGLRSSAPPREGGRSFETEFSGSGFGVSPPPSSVPLPKFNLRREVSCN 180

Query: 181 VEAAAGVDVGATVNLRRLLRLR 203
           VE AAGVD GAT NLRRLLRLR
Sbjct: 181 VE-AAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Sed0013309 vs. NCBI nr
Match: XP_022997633.1 (uncharacterized protein LOC111492508 [Cucurbita maxima])

HSP 1 Score: 260.0 bits (663), Expect = 1.7e-65
Identity = 138/202 (68.32%), Postives = 155/202 (76.73%), Query Frame = 0


Query: 1   MKAVLIPFPPKQSRNLKPLNFSPAAVHGGLLKSPPPAVAFNTHRHRQQPPLLPFPRRPFP 60
           M+AVLIPF  ++SR+LK  NFSPA VH G+L  PPPAV   +HRH QQPPLLP P RPFP
Sbjct: 1   MEAVLIPFSAERSRSLKSRNFSPATVHDGVLNIPPPAVPNYSHRHHQQPPLLPLPGRPFP 60

Query: 61  PPVAGAQPSFRSKVVRSRDQSLTPKKQKPNKRISVPPEVKPPAETTAELVIVDSTNRLGP 120
           P   G  PS R K  +SRDQSLTPKK KP KR   PP +K    +TAE +IVDSTNRLGP
Sbjct: 61  PTAVGVPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK----STAEFMIVDSTNRLGP 120

Query: 121 EPNDVPKDLWKGLGLRSPAPPCEGSRNLEMEFSGSAFSVSPPPSSLPLPKFPLMRKLNCN 180
           EP+ VPKDLW+ LGLRS APP EG R+ E EFSGSAF VSPPPSS+PLPKF L R+++CN
Sbjct: 121 EPSHVPKDLWRVLGLRSSAPPREGGRSFETEFSGSAFGVSPPPSSVPLPKFTLRREVSCN 180

Query: 181 VEAAAGVDVGATVNLRRLLRLR 203
           VE AAGVD GAT NLRRLLRLR
Sbjct: 181 VE-AAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Sed0013309 vs. NCBI nr
Match: XP_022962625.1 (uncharacterized protein LOC111463019 [Cucurbita moschata])

HSP 1 Score: 259.2 bits (661), Expect = 2.9e-65
Identity = 139/202 (68.81%), Postives = 154/202 (76.24%), Query Frame = 0


Query: 1   MKAVLIPFPPKQSRNLKPLNFSPAAVHGGLLKSPPPAVAFNTHRHRQQPPLLPFPRRPFP 60
           M+ VLIPF  ++SR+LK  NF PA VH GLL  PPPAV   +HR RQQPPLLP PRRPFP
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRLRQQPPLLPLPRRPFP 60

Query: 61  PPVAGAQPSFRSKVVRSRDQSLTPKKQKPNKRISVPPEVKPPAETTAELVIVDSTNRLGP 120
           P   GA PS R K  +SRDQSLTPKK KP KR   PP +K    +TAE +IVDSTNRLGP
Sbjct: 61  PTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK----STAEFMIVDSTNRLGP 120

Query: 121 EPNDVPKDLWKGLGLRSPAPPCEGSRNLEMEFSGSAFSVSPPPSSLPLPKFPLMRKLNCN 180
           EP+ VPKDLW+ LGLRS APP EG R  E EFSGSAF VSPPPSS+PLPKF L R+++CN
Sbjct: 121 EPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSSVPLPKFTLRREMSCN 180

Query: 181 VEAAAGVDVGATVNLRRLLRLR 203
           VE AAGVD GAT NLRRLLRLR
Sbjct: 181 VE-AAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Sed0013309 vs. NCBI nr
Match: XP_038884839.1 (uncharacterized protein LOC120075485 [Benincasa hispida])

HSP 1 Score: 256.1 bits (653), Expect = 2.5e-64
Identity = 143/207 (69.08%), Postives = 158/207 (76.33%), Query Frame = 0


Query: 1   MKAVLIPFPPKQSRNLKPLNFSPAAVHGGLLKSPPPAVAFNTHRHRQQPPLLPFPRRPFP 60
           M+AVL+PF   +SR+  P NFSPA VHGGL   PPPAV + +HRH QQPPLLP PRRPFP
Sbjct: 1   MEAVLVPF--SESRSFNPQNFSPATVHGGLFNFPPPAVTYFSHRHHQQPPLLPLPRRPFP 60

Query: 61  PPVAGAQPSFRSKVVRSRDQSLTPKKQKPNKRISVPPEVKPPAETTAELVIVDSTNRLGP 120
           PP  GA    R K  +SRDQSLTPKK KP KR    P   P  ++T E VIVDSTNRLGP
Sbjct: 61  PPETGATAFCRPK-CKSRDQSLTPKKSKPIKRSKGGP---PAVKSTVEFVIVDSTNRLGP 120

Query: 121 EPNDVPKDLWKGLGLRSPAPPCEGSRNL----EMEFSGSAFSVSPPPSSLPLPKFPLMRK 180
           EP+ VPKDLWK LGL+S APPCEGSR+L    EMEFSGSAFSVSPPPSS+PLPKF L RK
Sbjct: 121 EPSHVPKDLWKVLGLQSSAPPCEGSRSLGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRK 180

Query: 181 -LNCNVEAAAGVDVGATVNLRRLLRLR 203
            ++CNVE AAGVD GAT NLRRLLRLR
Sbjct: 181 VVSCNVE-AAGVDAGATDNLRRLLRLR 200

[Close]

BLAST of Sed0013309 vs. NCBI nr
Match: KAG6598509.1 (hypothetical protein SDJN03_08287, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255.0 bits (650), Expect = 5.5e-64
Identity = 137/202 (67.82%), Postives = 152/202 (75.25%), Query Frame = 0


Query: 1   MKAVLIPFPPKQSRNLKPLNFSPAAVHGGLLKSPPPAVAFNTHRHRQQPPLLPFPRRPFP 60
           M+ VLIPF  ++SR+LK  NF PA VH GLL  PPPAV   +HR RQQPPLLP PRRPFP
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPFP 60

Query: 61  PPVAGAQPSFRSKVVRSRDQSLTPKKQKPNKRISVPPEVKPPAETTAELVIVDSTNRLGP 120
           P   G  PS R K  +SRDQSLTPKK KP KR   PP +K    +TAE +IVDSTNRLGP
Sbjct: 61  PTAVGPPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK----STAEFMIVDSTNRLGP 120

Query: 121 EPNDVPKDLWKGLGLRSPAPPCEGSRNLEMEFSGSAFSVSPPPSSLPLPKFPLMRKLNCN 180
           EP+ VPKDLW+ LGLRS APP EG R  E EFSGSAF VSPPPS +PLPKF L R+++CN
Sbjct: 121 EPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRREVSCN 180

Query: 181 VEAAAGVDVGATVNLRRLLRLR 203
           VE AAGVD GAT NLRRLLRLR
Sbjct: 181 VE-AAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Sed0013309 vs. ExPASy TrEMBL
Match: A0A6J1KEH8 (uncharacterized protein LOC111492508 OS=Cucurbita maxima OX=3661 GN=LOC111492508 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 8.2e-66
Identity = 138/202 (68.32%), Postives = 155/202 (76.73%), Query Frame = 0


Query: 1   MKAVLIPFPPKQSRNLKPLNFSPAAVHGGLLKSPPPAVAFNTHRHRQQPPLLPFPRRPFP 60
           M+AVLIPF  ++SR+LK  NFSPA VH G+L  PPPAV   +HRH QQPPLLP P RPFP
Sbjct: 1   MEAVLIPFSAERSRSLKSRNFSPATVHDGVLNIPPPAVPNYSHRHHQQPPLLPLPGRPFP 60

Query: 61  PPVAGAQPSFRSKVVRSRDQSLTPKKQKPNKRISVPPEVKPPAETTAELVIVDSTNRLGP 120
           P   G  PS R K  +SRDQSLTPKK KP KR   PP +K    +TAE +IVDSTNRLGP
Sbjct: 61  PTAVGVPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK----STAEFMIVDSTNRLGP 120

Query: 121 EPNDVPKDLWKGLGLRSPAPPCEGSRNLEMEFSGSAFSVSPPPSSLPLPKFPLMRKLNCN 180
           EP+ VPKDLW+ LGLRS APP EG R+ E EFSGSAF VSPPPSS+PLPKF L R+++CN
Sbjct: 121 EPSHVPKDLWRVLGLRSSAPPREGGRSFETEFSGSAFGVSPPPSSVPLPKFTLRREVSCN 180

Query: 181 VEAAAGVDVGATVNLRRLLRLR 203
           VE AAGVD GAT NLRRLLRLR
Sbjct: 181 VE-AAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Sed0013309 vs. ExPASy TrEMBL
Match: A0A6J1HFM4 (uncharacterized protein LOC111463019 OS=Cucurbita moschata OX=3662 GN=LOC111463019 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.4e-65
Identity = 139/202 (68.81%), Postives = 154/202 (76.24%), Query Frame = 0


Query: 1   MKAVLIPFPPKQSRNLKPLNFSPAAVHGGLLKSPPPAVAFNTHRHRQQPPLLPFPRRPFP 60
           M+ VLIPF  ++SR+LK  NF PA VH GLL  PPPAV   +HR RQQPPLLP PRRPFP
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRLRQQPPLLPLPRRPFP 60

Query: 61  PPVAGAQPSFRSKVVRSRDQSLTPKKQKPNKRISVPPEVKPPAETTAELVIVDSTNRLGP 120
           P   GA PS R K  +SRDQSLTPKK KP KR   PP +K    +TAE +IVDSTNRLGP
Sbjct: 61  PTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALK----STAEFMIVDSTNRLGP 120

Query: 121 EPNDVPKDLWKGLGLRSPAPPCEGSRNLEMEFSGSAFSVSPPPSSLPLPKFPLMRKLNCN 180
           EP+ VPKDLW+ LGLRS APP EG R  E EFSGSAF VSPPPSS+PLPKF L R+++CN
Sbjct: 121 EPSHVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSSVPLPKFTLRREMSCN 180

Query: 181 VEAAAGVDVGATVNLRRLLRLR 203
           VE AAGVD GAT NLRRLLRLR
Sbjct: 181 VE-AAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Sed0013309 vs. ExPASy TrEMBL
Match: A0A5A7VG22 (Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001470 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.9e-56
Identity = 128/207 (61.84%), Postives = 143/207 (69.08%), Query Frame = 0


Query: 1   MKAVLIPFPPKQSRNLKPLNFSPAAVHGGLLKSPPPAVAFNTHRHRQQPPLLPFPRRPFP 60
           M+ VLIPF   QSR+  P N SPA VH GLL  P   + +N  RH QQPPLLP PRRP P
Sbjct: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60

Query: 61  PPVAGAQPSFRSKVVRSRDQSLTPKKQKPNKRISVPPEVKPPAETTAELVIVDSTNRLGP 120
           P   GA   FR K V+ RDQSL PKK KP KR   P    P A++T ELVI+DSTNRLGP
Sbjct: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGP----PAAKSTVELVIIDSTNRLGP 120

Query: 121 EPNDVPKDLWKGLGLRSPAPPCEGSRN----LEMEFSGSAFSVSPPPSSLPLPKFPLMRK 180
           EP  VPKDLW+ LGLR  AP C+ +R+     E+EFSGSA S SPPPSS+PLPKF L RK
Sbjct: 121 EPCHVPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRK 180

Query: 181 -LNCNVEAAAGVDVGATVNLRRLLRLR 203
            + CNVE  AGVD GAT NLRRLLRLR
Sbjct: 181 VVGCNVE-GAGVDAGATDNLRRLLRLR 202

[Close]

BLAST of Sed0013309 vs. ExPASy TrEMBL
Match: A0A0A0LN70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345930 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 8.5e-55
Identity = 127/207 (61.35%), Postives = 144/207 (69.57%), Query Frame = 0


Query: 1   MKAVLIPFPPKQSRNLKPLNFSPAAVHGGLLKSPPPAVAFNTHRHRQQPPLLPFPRRPFP 60
           M+ V IPF   QSR   P NFSPA VHGG L  P P +++N+ R  QQPPLLP PRRP P
Sbjct: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP 60

Query: 61  PPVAGAQPSFRSKVVRSRDQSLTPKKQKPNKRISVPPEVKPPAETTAELVIVDSTNRLGP 120
           P   GA  S R K +  RDQSLTPKK KP KR   P    P A++T ELVIVDSTNRLGP
Sbjct: 61  PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGP----PAAKSTVELVIVDSTNRLGP 120

Query: 121 EPNDVPKDLWKGLGLRSPAPPCEGSRN----LEMEFSGSAFSVSPPPSSLPLPKFPLMRK 180
           EP+ VPKDL   LGLR   P CE +R+     E+EFSGSA+S SPPPSS+PLPKF L RK
Sbjct: 121 EPSHVPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRK 180

Query: 181 -LNCNVEAAAGVDVGATVNLRRLLRLR 203
            + CNVE A+GVD GAT NLRRLLR+R
Sbjct: 181 VVGCNVE-ASGVDAGATDNLRRLLRIR 202

[Close]

BLAST of Sed0013309 vs. ExPASy TrEMBL
Match: A0A6J1GI76 (uncharacterized protein LOC111454434 OS=Cucurbita moschata OX=3662 GN=LOC111454434 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.6e-51
Identity = 130/211 (61.61%), Postives = 143/211 (67.77%), Query Frame = 0


Query: 1   MKAVLIPFPPKQSRNLKPLNFSPAAVHGGLLKSPPPAVAFNTH--RHRQQPPLLPFPRRP 60
           M+AVLIP            NFSPAA          PAV F +H  RHR+QPP  P PRR 
Sbjct: 1   MEAVLIPH-----------NFSPAA----------PAVTFYSHRRRHRRQPPRFPLPRRS 60

Query: 61  FPPPVAGAQPSFRSKVVRSRDQSLTPKKQKPNKRISVPPEVKPPAETTAELVIVDSTNRL 120
           FPP  A AQPS R K VR RDQSL PKK K  KR       + P E TAE +IVDSTNR+
Sbjct: 61  FPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCR-----ELPVEMTAEALIVDSTNRM 120

Query: 121 GPEPNDVPKDLWKGLGLRSP---APPCEGSRNL----EMEFSGSAFSVSPPPSSLPLPKF 180
           GPEP+ VPKDL   LGLR P   +PP EGSR+L    E+EFSGSAF+VSPPPSS+PLP F
Sbjct: 121 GPEPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNF 180

Query: 181 PLMRKLNCNVEAAAGVDVGATVNLRRLLRLR 203
           PLMRKLNCNVEAAAG+D GAT NLRRLLRLR
Sbjct: 181 PLMRKLNCNVEAAAGIDAGATDNLRRLLRLR 185

[Close]

BLAST of Sed0013309 vs. TAIR 10
Match: AT1G20070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 9.5e-06
Identity = 63/202 (31.19%), Postives = 83/202 (41.09%), Query Frame = 0


Query: 9   PPKQSRNLKPL-NFSPAAVHGGLLKSPPP-AVAFNTHRHRQQPPLLPFPRRPFPPPVAGA 68
           P KQ   L+P  N    +  G L +S    A+  N        P  P P     PP+   
Sbjct: 10  PGKQVSGLRPFKNPKRRSSRGSLSRSGGSLALPLNPTSSWGSSPAYPPPHSYSQPPLLPL 69

Query: 69  QPSFRSKVVRSRDQSLTPKKQKPNKRISVPPEVKPPAET---TAELVIVDSTNRLGPEPN 128
                S V   R  S  P+    N  ++   + K  +ET    AE +      R G  P 
Sbjct: 70  PRVNSSTVPLQRVNSSRPRVNN-NSSLNRVAQTKAISETHMKKAEFIESARLTRTGSVPI 129

Query: 129 DVP--KDLWKGL-GLRSPAPPCEGSRNLEMEFSGSAFSVSPPPSSLPLPKFPLMRKLNCN 188
                +D  +G  G   PA                   +SPPPSSLP+P+F +  KL CN
Sbjct: 130 QANQLRDFPEGFDGYPGPA----------------IMLLSPPPSSLPMPRFSIKPKLRCN 189

Query: 189 VEAAAGVDVGATVNLRRLLRLR 203
           VEAA   DV AT N+RR+L+LR
Sbjct: 190 VEAAGKSDV-ATNNIRRVLQLR 193

The following BLAST results are available for this feature:

BLAST of Sed0013309 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546813.1	1.2e-66	69.31	proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo]	[more]
XP_022997633.1	1.7e-65	68.32	uncharacterized protein LOC111492508 [Cucurbita maxima]	[more]
XP_022962625.1	2.9e-65	68.81	uncharacterized protein LOC111463019 [Cucurbita moschata]	[more]
XP_038884839.1	2.5e-64	69.08	uncharacterized protein LOC120075485 [Benincasa hispida]	[more]
KAG6598509.1	5.5e-64	67.82	hypothetical protein SDJN03_08287, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0013309 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0013309 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KEH8	8.2e-66	68.32	uncharacterized protein LOC111492508 OS=Cucurbita maxima OX=3661 GN=LOC111492508...	[more]
A0A6J1HFM4	1.4e-65	68.81	uncharacterized protein LOC111463019 OS=Cucurbita moschata OX=3662 GN=LOC1114630...	[more]
A0A5A7VG22	5.9e-56	61.84	Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0LN70	8.5e-55	61.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345930 PE=4 SV=1	[more]
A0A6J1GI76	2.6e-51	61.61	uncharacterized protein LOC111454434 OS=Cucurbita moschata OX=3662 GN=LOC1114544...	[more]

BLAST of Sed0013309 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20070.1	9.5e-06	31.19	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF15365	PNRC	coord: 152..171 e-value: 2.5E-5 score: 24.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..102
None	No IPR available	PANTHER	PTHR33670	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 29..202
None	No IPR available	PANTHER	PTHR33670:SF14	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 29..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013309.1	Sed0013309.1	mRNA