Sed0013307 (gene) Chayote v1

Overview
NameSed0013307
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUBN2_3 domain-containing protein
LocationLG09: 35438298 .. 35443524 (-)
RNA-Seq ExpressionSed0013307
SyntenySed0013307
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAACCAGAAGTCTTGAGCTCTATCGATTCCGCAACAATCGAAGCACAGATGAACCCTTATTCTTTGCATCATTCCTTTAGCGCCACCGCCACCCTCGTTTCTCAGCCGCTCACTGGAGCCGCCAACTACGTTTCATGGAAACGTGCTATGAGCATAGCTCTCTCCGGCAAGAACAAAGAGGGGTTTGTGAATGGCACCATCAAGAAACCTGCAGCAAATTCGAAACTAGCGGCGTCTTGGAAATGTAACAACGACGTTATTTGTTCTTGGATAATGAATTATGTATCCAAAGAAATTGCTGCAAGTATCGTTTACAATGGAAGTGTGCAAGAAATCTGGGAAGAATTGGGGGAAAGATTCAAGGAATCTAATGGTCCACGCATCTTTCAACTTCGTAAAGAACTTGTGACCACTGTGCAAGGTTCTTCCTCGGTAGAAACCTTCTTCACTAAGATGAAAACTCTTTGGCAAGAATTGAGTGAGTTCAGGCCCGAGAATGAGTGTTCTTGTGGCGAATTAAAACCTTTTCTTGCACATTTAGATTCAGAATATGTCATGCTTTTTCTTATGGGGCTCAATGACTCATATGCTGCTGTTCGATCTCAGATTCTTCTTATGGAGCCAATGCCTTCCATTAGCAAGGTTTTTAGCCTTATATCCCAAGAAGAAAGACAACGTCAGGCTGGAATGACAATGCAGCCCCCCCTTGATCCTATTGCCTTGTTTGCTGGTGATTTCAAACAGAAGATTGACTCGGTCGCTAGTTCTTCACGCCGCAACAATGACAATAGATCTCGATGCACACATTGTGGTTATAGAGGACATACGAGAGACACCTGCTATAAGATTCATGGATATCCTCTTGGTTATAAGCCTCGAAATCCCTCTATTAATACCAAGAATGTACAGAATTCTCCTATAAATGCCAATGTTGCAGTAGCACAACAGCCAAGTTTCTTTTCTAGCCTAAATGGAGATCAATATACCCAACTTCTGGAGTTATTGAACACGCACGTCCATGGTGTAAAGGGAGACAATATCAGTGCAATGGCACATACCACAGGTATTTTCACTATTACCTCTTCTTCTAATTTTAAATCAAATATGTGGATCATTGATTCTGGTGCATCCCGACATATCTGCCATGATTATAAGATGATTTACAATTGGAAGAAAGTATATGATTTATCTGTGATTTTGCCTACTTCACAAAAGGTTTCTATAGAATATATTGGTGATGTTGTTGTATCAAAGGACTTAGATGTGCTATATGTTCCTGGATTTTCATTCAATCTACTATCAGTAAGCTGCCTATTGAAGGCTAATGACAGTTATGTGAATTTCTACAATAATCAATGTTTAATTCAGGACAAGGCATCATTGAAGACGATTGGCAGGGGTAGCTTGTACAATGGCTTGTATCTTCTAACCATGCCATTGATTCATTCGAAGACAGAAGACAAATTGGTAGGCACCAAAATGGAGGATCCCTTCGCTGGCGTAGTTACTACTGATATTTGGCATAGTCGTCTAGGACATGTCTCTTTCAAACGTCTCTCGTGTATGAAGAATATTTTGAATTGTAGTTCTAATATTTCTTTTAGCTGTGATGTATGCCCATTGGCAAAACAAAGAAGGATAGTCTTTCCTTTTAACAATAAAGTCGCATCCGAAATTTTCGATCTTATCCATTGTGATATTTGGGGTCCCATGAAAGTTCCTTCCTTACTTGGTTATAGATACTTTCTTACCATTGTGGATGACTGTTCTAGATATACATGGGTGTTTATGATGCGATCAAAGTCTGATGTTTTAAACATAATTCCAAGATTCTTTAAGCTAGTCGAAACTCAACATAAAAAGGTTATCAAAATTTTTCGCTCGACGATAATGCTCACGAGCTACGCTTTCTGAATTTTTGCAACAACGGGCACAATGCATCAATTTTCATGCGTCGAAACTCCGCAACAAAACTCTGTCGTTGAACGAAAACATCAACATTTGTTGAATGTGGCACGCGCTTTGTATTTTCAATCTTGTGTACCCCTCTACCTTTGGAGTGAATGTGTCTTAACTGCAGCATATATTGTTAATCGAATTCCCATGCCATTGCTGTCCAATGCCACCCCCTTTTCAATTTTGCACAAAGATACTGTCGACTATAGCGGTATGCGGACTTTTGGTTGTAAATGTTTTGCTTCCACATTAGCTTCAAAACGCACTAAGTTTAAACCTCGTGCAAAAGAGTATGTTTTTGTTGGCTACCCCGTAGGCATAAAAGGATACAAATTGTTTGATTGCTCCTCACAACAGTTTATTGTTTCCCGCGACGTTGTCTTTAATGAAAAGAGTTATCCATTTAAGGATAATGCTCAATTGAATATAGAAGCCCATGATCCTTTTCCTGATGTGATCTTGCCATGTCTAGCTTCTGAACCTCTTGGTCAGCTTTTTCAGCCAGTACAGGAAGATCTACTCATGATTGTCCAATTTTGGAGACTAATCAGCATATATCAGATGATGATCATGAAGTTCTTGTTGATAACACTCACGAAGATGAACTATCCCAAGAAGAAACAACAGCTCCTATTGTTGAAAACACTCCTCTATGCAGCGAGCAAAGTGTTTCTTCTACAGGAGCACTCTCTCCTAATATCTTTGAACATCCTGAAAATCAGTCCAGCTCTCGACAAACTACTGATGCAAGTGTCAGGCAATGGTTCTGTTGAACAAAATGTTGACCCGCCAAGCGACTCCCGTGTTTTACCGGAGGTCCGACGGTCTACAGGGCAACGTAATCCTCCTTCTTTTTTGAAAGATTATCACTGTCATCTCCTTGAAAATTCTTCTTTAGGAAGCACTCATCCTCACTCGATAGGAAATGTTTTGTCCTATGATCGATTTTCTGAGGAACAAAGGAGATATATTCTAAATATATCTGTTGTTTTTTAACCAACCTATTATCACCAAGCTATAAAATATCCTCAATGGAAGAATGCTATGAATAAAGAAATTGAAGCCATGGAAAGAACAAATACTTGGACTTTGGTTCCATTACCCCTTGGACATCACATTGTTGGATGCAAATGGATCTACAAAGTAAAGTATGGAGCCGATGGAAACATTTCCAGGTACAAAGCACGCCTCGTCGCTAAGGGATATAGCCAAATAGAAGGAGTTGATTACCTTGACACCTTTTCACCTGTTGCTAAGGTTGTTTCTGTCAAGGTGGTGTTAAGTCTTGCTGCTTCTCACGGCTGGTCCATATCTCAGTTGGACGTCAACAACGCCTTTTTAAATGGCGACCTTTTTGAAGAAGTTTACATGAGTCTCCCACAGGGCTACTATTCTGATAAACAAACTACCAGCCCTTCTCCCCTTGTTTGTAAACTAAATAGATCCATCTATGGTCTCAAGCAAGCATCACGGCAATGGTTTTCGAAATTCTCTCAAGTTCTCCTTCAAAATGGCTTTACTCAATCCAAGGCTGATTATTCCTTGTTTACGAAGGGCATCGGTGACAGTTTTGTAGCATTACTGGTTTATGTAGACGACATTTTAGTAACTGGTCCTTCGTTGACACATGTTAACACTGTTAAAACCCTCTTGAAGTCTCGCTTTATGTTAAAAGACTTGGGGAATGCTAAATACTTCTTAGGTCTCGAGTTCTCTCGCTCTAAAAATGGCTTATACCTATCACAAAGGAAGTATTGCCTTCAGTTACTAGAAGATTATGGTGTTCTTGGTGCAAAAGTGGTTAGTTCACCCATGATTCCAAATGCAAAACTCATTGCTACTTGTGGTTCTCTCTTCTTATCTTTGAAAAGGCAATCGAATATAGGAGATTGATAGGTCGACTACTTTACCTCCAAGTGACACGGCCTGATATATCATTCCCTGTTCACAAACTCAGTCAGTTTGTGTCTTCTCCACGGGATGACCATTTCCTCAGCCATCTATCTTTTAAAATATTTAAAAGGAAGTGTCGGCCAAGGAATCTTTCATGATCGATTAATTCCTTTCAACTTAAAGCCTTAAATCGACTCGATTGGGTTTGCTTGTATGGATTCAAGACGATCCAGAATCGGCTTTTGTATCTTTTGGGTGATTCCTTGGTATCTTGGAAGACAAAGAAACAAGCCATCAGATCTCGCTCCTCCTCGGTGAAGCCGAATACCGTGCCTTAGCAAATGTAACTTGTGAGATCACTTGGCTATACTCATTGTTCAAAGATCTCCATATCAAAAGTCCCTCACCTGCTCTTGTCTATTGCGACAATTTGGCTGCCATTGCAATAGCCAATAACCCTGTTTTCCACGAACGAACCAAGCACATCGAAGTCGATTGTCATTTCGTACGAGACAAACTTGAAGAAGGCCTTTTAAAGTTGCTACCGATTCGATCAGCTGCTCAATTAGCGGACATGTTTACCAAATCCCTCCCTACTGCCACCCTTCAGGAGTTCATGATCAAGATGGGAATTATCAATCTTCATGATTGTCCATCTTGAAGGGGGGGTATCAAGAATATTTCTATCAAGAATATTTCCCTTTCTTCTTCATTCTGTTTTAGGTTAGTTTGTTAGTTCTTATTCTGTTAAAGAACGATTTCTTGTAAAAGCTCCTCTTATTTACCTTCCTCTATTTAAGAGAGGCTCCATGGATAAATAAAACACTTGAAACTTTTCCTCTCAACCTTGTTAAACCTAGCACATGTTTATTACTAAGAAGCTAGAATCCACACAAAAAAATAAATAAATAAAAGAAGTAAAGACCTTCCAAACCATGAAGGAACGAAGTCTCTTTCGAATGAAACACATGCTATTTTAGAATTTCCTTTGTCAATCAATTTTTCTTGTTACCACAATAACTGAAGAACATAACGGATCAAGACTCTTACAATAAAATTAAACAAAACATTAAGATAGGTTTTGAAAGTGAAACCACTTCTAAATTATTTTTAATTGTCCAAGAGTTGTCCAATTCTCGAACAAACCACTTTATAATTTTCATGATAAATGGCACTCCCAGTCTGTAGGGTGGCCTGGTGGACAAGAACCACAATATTCAATATCTTTGTCAATCAATTCGGGGCAATGGGTTTTTATCTCATAAATCAGCTTTTCCATAATGATTTTATAGATTTTGGATTTTTTTTTTTGAAAATCGGGAAATCGGAGGTTCGCTCCCCTATACCCGGAATACTACTGACCCGTCACTAG

mRNA sequence

ATGGCAGAACCAGAAGTCTTGAGCTCTATCGATTCCGCAACAATCGAAGCACAGATGAACCCTTATTCTTTGCATCATTCCTTTAGCGCCACCGCCACCCTCGTTTCTCAGCCGCTCACTGGAGCCGCCAACTACGTTTCATGGAAACGTGCTATGAGCATAGCTCTCTCCGGTTCTTCCTCGGTAGAAACCTTCTTCACTAAGATGAAAACTCTTTGGCAAGAATTGAACACCTGCTATAAGATTCATGGATATCCTCTTGGTTATAAGCCTCGAAATCCCTCTATTAATACCAAGAATGTACAGAATTCTCCTATAAATGCCAATGTTGCAGTAGCACAACAGCCAAGTTTCTTTTCTAGCCTAAATGGAGATCAATATACCCAACTTCTGGAGTTATTGAACACGCACGTCCATGCCTTAAATCGACTCGATTGGGTTTGCTTGTATGGATTCAAGACGATCCAGAATCGGCTTTTGTATCTTTTGGGTGATTCCTTGGTATCTTGGAAGACAAAGAAACAAGCCATCAGATCTCGCTCCTCCTCGGTGAAGCCGAATACCCTCCTCTTATTTACCTTCCTCTATTTAAGAGAGGCTCCATGGATAAATAAAACACTTGAAACTTTTCCTCTCAACCTTCTTTTCCATAATGATTTTATAGATTTTGGATTTTTTTTTTTGAAAATCGGGAAATCGGAGGTTCGCTCCCCTATACCCGGAATACTACTGACCCGTCACTAG

Coding sequence (CDS)

ATGGCAGAACCAGAAGTCTTGAGCTCTATCGATTCCGCAACAATCGAAGCACAGATGAACCCTTATTCTTTGCATCATTCCTTTAGCGCCACCGCCACCCTCGTTTCTCAGCCGCTCACTGGAGCCGCCAACTACGTTTCATGGAAACGTGCTATGAGCATAGCTCTCTCCGGTTCTTCCTCGGTAGAAACCTTCTTCACTAAGATGAAAACTCTTTGGCAAGAATTGAACACCTGCTATAAGATTCATGGATATCCTCTTGGTTATAAGCCTCGAAATCCCTCTATTAATACCAAGAATGTACAGAATTCTCCTATAAATGCCAATGTTGCAGTAGCACAACAGCCAAGTTTCTTTTCTAGCCTAAATGGAGATCAATATACCCAACTTCTGGAGTTATTGAACACGCACGTCCATGCCTTAAATCGACTCGATTGGGTTTGCTTGTATGGATTCAAGACGATCCAGAATCGGCTTTTGTATCTTTTGGGTGATTCCTTGGTATCTTGGAAGACAAAGAAACAAGCCATCAGATCTCGCTCCTCCTCGGTGAAGCCGAATACCCTCCTCTTATTTACCTTCCTCTATTTAAGAGAGGCTCCATGGATAAATAAAACACTTGAAACTTTTCCTCTCAACCTTCTTTTCCATAATGATTTTATAGATTTTGGATTTTTTTTTTTGAAAATCGGGAAATCGGAGGTTCGCTCCCCTATACCCGGAATACTACTGACCCGTCACTAG

Protein sequence

MAEPEVLSSIDSATIEAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSSSVETFFTKMKTLWQELNTCYKIHGYPLGYKPRNPSINTKNVQNSPINANVAVAQQPSFFSSLNGDQYTQLLELLNTHVHALNRLDWVCLYGFKTIQNRLLYLLGDSLVSWKTKKQAIRSRSSSVKPNTLLLFTFLYLREAPWINKTLETFPLNLLFHNDFIDFGFFFLKIGKSEVRSPIPGILLTRH
Homology
[Close]
BLAST of Sed0013307 vs. NCBI nr
Match: KAA0035612.1 (No apical meristem (NAM) protein [Cucumis melo var. makuwa] >TYK30930.1 No apical meristem (NAM) protein [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 2.8e-09
Identity = 63/232 (27.16%), Postives = 78/232 (33.62%), Query Frame = 0 

Query: 19  MNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSS------------------ 78
           +NPY +HHS   TA +V QPLTGA NY+SW RAM +A+SG +                  
Sbjct: 20  INPYFIHHSLGPTAAIVMQPLTGAINYISWSRAMLMAISGRNKAGFITGKIQKPSDGVLL 79

Query: 79  ----------------------SVETFFTKMKT----------------LWQE------- 138
                                 +    +T   T                L QE       
Sbjct: 80  DAWICNNDILASWILNSVSKEIAASIIYTGSSTNSPYATFTFNQHCISLLIQEEQQRSAG 139

Query: 139 ---------------------------------------------LNTCYKIHGYPLGYK 141
                                                         + CYK HGYP GYK
Sbjct: 140 ILTPPIDPVALFTTQNIAPTMAISTDRNRKKERPTCCYCGIKGHIADKCYKKHGYPPGYK 199

[Close]
BLAST of Sed0013307 vs. NCBI nr
Match: KAA0065480.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK08721.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 65.9 bits (159), Expect = 5.8e-07
Identity = 74/326 (22.70%), Postives = 95/326 (29.14%), Query Frame = 0 

Query: 16  EAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSS--------------- 75
           +AQ+NPY +HHS   TA +V+QPLTGA NY SW RAM +A+SG +               
Sbjct: 23  DAQLNPYFIHHSLGPTAAIVTQPLTGAINYTSWSRAMLMAISGRNKAGFITGKIQKPSDG 82

Query: 76  ------------------------------------------------------------ 135
                                                                       
Sbjct: 83  VLLDAWICNNDILASWILNSVSKEIAASIIYIGSIKEIWDELRQRFKQSNGPSIYQLRKE 142

Query: 136 ---------SVETFFTKMKTLWQELN---------------------------------- 141
                    ++ET++TK+KT+WQ LN                                  
Sbjct: 143 FVTLRQGNLTIETYYTKLKTIWQNLNEYRFTNDCTCGGLKPFIDHLESEYIMAFLMGLND 202

[Close]
BLAST of Sed0013307 vs. NCBI nr
Match: XP_031745063.1 (uncharacterized protein LOC116405242 [Cucumis sativus])

HSP 1 Score: 65.1 bits (157), Expect = 9.8e-07
Identity = 39/105 (37.14%), Postives = 52/105 (49.52%), Query Frame = 0 

Query: 10  IDSATIEAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSG----------- 69
           I S+ ++ Q+NP+ LHHS + T  LVS PL G+ NY SW RAM +ALSG           
Sbjct: 18  ITSSNLDVQLNPFMLHHSITPTTNLVSTPLAGSNNYSSWSRAMMLALSGKNKVGFITGLI 77

Query: 70  -----SSSVETFFTKMKTLWQELNTCYKIHGYPLGYKPRNPSINT 99
                 SS   F   +K +W EL   YK    P  Y+ +   + T
Sbjct: 78  KKPSEDSSKPRFNGNIKEMWDELKERYKQSNGPHIYQLQKDLVTT 122

[Close]
BLAST of Sed0013307 vs. NCBI nr
Match: XP_008463248.1 (PREDICTED: uncharacterized protein LOC103501452 [Cucumis melo])

HSP 1 Score: 65.1 bits (157), Expect = 9.8e-07
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 0 

Query: 79  CYKIHGYPLGYKPRNPSINT----KNVQNSPINANVAVA-QQPSFFSSLNGDQYTQLLEL 138
           CY  HGYPLGYKPRN +  T     +  N   N N A A   P FFSSLN +QY+QL+ +
Sbjct: 89  CYNKHGYPLGYKPRNSNPITTAPDTSKTNKVANTNSAAANHSPDFFSSLNSEQYSQLMTI 148

Query: 139 LNTHVHA 141
           LN H+ A
Sbjct: 149 LNNHLQA 155

[Close]
BLAST of Sed0013307 vs. NCBI nr
Match: KAA0057703.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27489.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 9.8e-07
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 0 

Query: 79  CYKIHGYPLGYKPRNPSINT----KNVQNSPINANVAVA-QQPSFFSSLNGDQYTQLLEL 138
           CY  HGYPLGYKPRN +  T     +  N   N N A A   P FFSSLN +QY+QL+ +
Sbjct: 93  CYNKHGYPLGYKPRNSNPITTAPDTSKTNKVANTNSAAANHSPDFFSSLNSEQYSQLMTI 152

Query: 139 LNTHVHA 141
           LN H+ A
Sbjct: 153 LNNHLQA 159

[Close]
BLAST of Sed0013307 vs. ExPASy TrEMBL
Match: A0A5D3E5P0 (No apical meristem (NAM) protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001460 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09
Identity = 63/232 (27.16%), Postives = 78/232 (33.62%), Query Frame = 0 

Query: 19  MNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSS------------------ 78
           +NPY +HHS   TA +V QPLTGA NY+SW RAM +A+SG +                  
Sbjct: 20  INPYFIHHSLGPTAAIVMQPLTGAINYISWSRAMLMAISGRNKAGFITGKIQKPSDGVLL 79

Query: 79  ----------------------SVETFFTKMKT----------------LWQE------- 138
                                 +    +T   T                L QE       
Sbjct: 80  DAWICNNDILASWILNSVSKEIAASIIYTGSSTNSPYATFTFNQHCISLLIQEEQQRSAG 139

Query: 139 ---------------------------------------------LNTCYKIHGYPLGYK 141
                                                         + CYK HGYP GYK
Sbjct: 140 ILTPPIDPVALFTTQNIAPTMAISTDRNRKKERPTCCYCGIKGHIADKCYKKHGYPPGYK 199

[Close]
BLAST of Sed0013307 vs. ExPASy TrEMBL
Match: A0A803NFI1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-07
Identity = 49/149 (32.89%), Postives = 63/149 (42.28%), Query Frame = 0 

Query: 15  IEAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSSSV------------ 74
           +E   +PY LHH+ +    LVSQ LTG  NY+SW RAM +A+S  + +            
Sbjct: 41  LEDPSDPYYLHHADNLGNVLVSQLLTGQDNYMSWSRAMQLAISVKNKLGFLDGDKINPNK 100

Query: 75  --------------ETFFTKMKTLWQELNTCYKIHGYPLGY-KPRNPSINTKNVQNSPIN 134
                           F T    L   +  CYKIHGYP GY K +        +Q S   
Sbjct: 101 QDSNAQKTQSQRRNRPFCTHCNILGHTIEKCYKIHGYPPGYNKNKGKEAAVNQIQTSSEG 160

Query: 135 ANVAVAQQPSFFSSLNGDQYTQLLELLNT 137
           AN +     +    L   QY QLL LL T
Sbjct: 161 AN-SSNDNSTLLPQLTSAQYQQLLNLLAT 188

[Close]
BLAST of Sed0013307 vs. ExPASy TrEMBL
Match: A0A5A7VE66 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00250 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.8e-07
Identity = 74/326 (22.70%), Postives = 95/326 (29.14%), Query Frame = 0 

Query: 16  EAQMNPYSLHHSFSATATLVSQPLTGAANYVSWKRAMSIALSGSS--------------- 75
           +AQ+NPY +HHS   TA +V+QPLTGA NY SW RAM +A+SG +               
Sbjct: 23  DAQLNPYFIHHSLGPTAAIVTQPLTGAINYTSWSRAMLMAISGRNKAGFITGKIQKPSDG 82

Query: 76  ------------------------------------------------------------ 135
                                                                       
Sbjct: 83  VLLDAWICNNDILASWILNSVSKEIAASIIYIGSIKEIWDELRQRFKQSNGPSIYQLRKE 142

Query: 136 ---------SVETFFTKMKTLWQELN---------------------------------- 141
                    ++ET++TK+KT+WQ LN                                  
Sbjct: 143 FVTLRQGNLTIETYYTKLKTIWQNLNEYRFTNDCTCGGLKPFIDHLESEYIMAFLMGLND 202

[Close]
BLAST of Sed0013307 vs. ExPASy TrEMBL
Match: A0A5D3DVP4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00430 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.8e-07
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 0 

Query: 79  CYKIHGYPLGYKPRNPSINT----KNVQNSPINANVAVA-QQPSFFSSLNGDQYTQLLEL 138
           CY  HGYPLGYKPRN +  T     +  N   N N A A   P FFSSLN +QY+QL+ +
Sbjct: 93  CYNKHGYPLGYKPRNSNPITTAPDTSKTNKVANTNSAAANHSPDFFSSLNSEQYSQLMTI 152

Query: 139 LNTHVHA 141
           LN H+ A
Sbjct: 153 LNNHLQA 159

[Close]
BLAST of Sed0013307 vs. ExPASy TrEMBL
Match: A0A1S3CJ63 (uncharacterized protein LOC103501452 OS=Cucumis melo OX=3656 GN=LOC103501452 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.8e-07
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 0 

Query: 79  CYKIHGYPLGYKPRNPSINT----KNVQNSPINANVAVA-QQPSFFSSLNGDQYTQLLEL 138
           CY  HGYPLGYKPRN +  T     +  N   N N A A   P FFSSLN +QY+QL+ +
Sbjct: 89  CYNKHGYPLGYKPRNSNPITTAPDTSKTNKVANTNSAAANHSPDFFSSLNSEQYSQLMTI 148

Query: 139 LNTHVHA 141
           LN H+ A
Sbjct: 149 LNNHLQA 155

The following BLAST results are available for this feature:
BLAST of Sed0013307 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0035612.12.8e-0927.16No apical meristem (NAM) protein [Cucumis melo var. makuwa] >TYK30930.1 No apica... [more]
KAA0065480.15.8e-0722.70Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >T... [more]
XP_031745063.19.8e-0737.14uncharacterized protein LOC116405242 [Cucumis sativus][more]
XP_008463248.19.8e-0750.75PREDICTED: uncharacterized protein LOC103501452 [Cucumis melo][more]
KAA0057703.19.8e-0750.75putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27489.1 putative m... [more]
BLAST of Sed0013307 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0013307 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E5P01.3e-0927.16No apical meristem (NAM) protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A803NFI11.6e-0732.89Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A5A7VE662.8e-0722.70Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A5D3DVP44.8e-0750.75Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3CJ634.8e-0750.75uncharacterized protein LOC103501452 OS=Cucumis melo OX=3656 GN=LOC103501452 PE=... [more]
BLAST of Sed0013307 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029472Retrotransposon Copia-like, N-terminalPFAMPF14244Retrotran_gag_3coord: 25..58
e-value: 6.3E-7
score: 29.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0013307.1Sed0013307.1mRNA