Sed0013283 (gene) Chayote v1

Overview


Name	Sed0013283
Type	gene
Organism	Sechium edule (Chayote v1)
Description	trafficking protein particle complex subunit 12
Location	LG14: 20176499 .. 20178007 (-)
RNA-Seq Expression	Sed0013283
Synteny	Sed0013283

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAAAGAGGGAGGTAATTCATCTTCTCTGCCTGTTCTGCGTCCGCCGGTGTACCAGATTCCGGCGACTGCTCGAATCTCCGATTCATCATCCTTCTTAATGGAAACCAAATCACCGCCGCCGTCACCGTCACCGGACTTTCACACTCACAGAACTTCCGATCCCGAAACCCCAACATCACCAATCTTAGAATCCACCATATCCTCCGATCCATTAACCATTCATTTCAGTTCCCTCAACGATCTCGCCCACGAGCTCGCCTCTCTTCAAGATCTCGCCAATCGCGGCTCATGGCGGTCAATTTCCGACAAGGTTTCTAGGGCAAGAAATCTCTCGCTTCTCCAAAACCCCCATGATCATCTCACTCATCTCTCTTACAACGTTCTTGCCCTAACTAAACTCCGTCGTTTCTCAGAAGCATTGGCAGAACTCGATTCGCTAGAAGATCTGGACAGCTCTCAATACAGGTACGAATCTTACCCAACTCTTTACCCTAATCGGACCGGATCTATGGTTCCCTTTTCACTCCGGTGGCTTCACGCCCTAATCCCCATCAAAATGGGGGAGCGTCAAGAAGGGTTGGACCGATTTTACCAACTTCTTGATTTTGTAAAGTCGAAATTGAACGATAAAGAAGGGAAAAACCTTGATGGGTCTGTCGATTTGTGGAAGAGAAGGGAAGTGTTTGTGGTTAATTGTATAATTGGTCATCATTTGAGTACTAAGGAATTTGGGGTTTGTTTGAGTTTGATTCATAACTTGCTTACTCGGGATTTTTCAGACCCTGCTATGATTTCGAAACTTGGGTATATACAGATGTACGTTGGTGATATTGATGGTGCTAAGCGTTCGTTTGATCTGATTGAGGAGATGGTTAAAGAAGGGAAGTGTAATGGGGTATTGAGTGAAGTTGAGATTAAGAATCTTGTGAATAGGAACAGGGCGTTTGTGTTCTTGATGGGTAAGGATTATGAATCAGCCGTGAAGGAATATGAGGAGTGCATTGAGAGGGATGGAATGGATGTGGTAGCCATTAACAACAAGGCTATTTGTTTGATGTACTTGAGGGATTTAGCTAACTCGATTAAGGTGCTTGAAAATGCTCTTGAAAGAGTTCCTGCTGTTGCTCTCAATGAAACTGTGGTGGTCAATCTGTGTAGTATGTACGAATTGGCTTACTTTAATCACTCCGAGATTAAGAGAACGCTCAATAACTGGATTTCTCGTGTCGCTCCAGATGATTTTGATTCTTCGAGTACTCGGATTTGAGGTACTTTTGAGTTTGTTTCTTGTATGAAAATCTATTCTTTTGTTCTTTTGTTTTTTGGGTGTTACGTGAAACTTATACATTATGAAGTTGATCATTCTTGTAGCTTATGAGTTTGCTTTTAGAATGGTCTGGTTTGTTGTAGTGCCATGAAAATGGTTATATTGATTTGTTTACTGGTTATGCTGGAATAAAGGAAGAACTTAAACTAAATTGTGGTTGATGGTTCTTGTTGTATGAG

mRNA sequence

CCAAAAAGAGGGAGGTAATTCATCTTCTCTGCCTGTTCTGCGTCCGCCGGTGTACCAGATTCCGGCGACTGCTCGAATCTCCGATTCATCATCCTTCTTAATGGAAACCAAATCACCGCCGCCGTCACCGTCACCGGACTTTCACACTCACAGAACTTCCGATCCCGAAACCCCAACATCACCAATCTTAGAATCCACCATATCCTCCGATCCATTAACCATTCATTTCAGTTCCCTCAACGATCTCGCCCACGAGCTCGCCTCTCTTCAAGATCTCGCCAATCGCGGCTCATGGCGGTCAATTTCCGACAAGGTTTCTAGGGCAAGAAATCTCTCGCTTCTCCAAAACCCCCATGATCATCTCACTCATCTCTCTTACAACGTTCTTGCCCTAACTAAACTCCGTCGTTTCTCAGAAGCATTGGCAGAACTCGATTCGCTAGAAGATCTGGACAGCTCTCAATACAGGTACGAATCTTACCCAACTCTTTACCCTAATCGGACCGGATCTATGGTTCCCTTTTCACTCCGGTGGCTTCACGCCCTAATCCCCATCAAAATGGGGGAGCGTCAAGAAGGGTTGGACCGATTTTACCAACTTCTTGATTTTGTAAAGTCGAAATTGAACGATAAAGAAGGGAAAAACCTTGATGGGTCTGTCGATTTGTGGAAGAGAAGGGAAGTGTTTGTGGTTAATTGTATAATTGGTCATCATTTGAGTACTAAGGAATTTGGGGTTTGTTTGAGTTTGATTCATAACTTGCTTACTCGGGATTTTTCAGACCCTGCTATGATTTCGAAACTTGGGTATATACAGATGTACGTTGGTGATATTGATGGTGCTAAGCGTTCGTTTGATCTGATTGAGGAGATGGTTAAAGAAGGGAAGTGTAATGGGGTATTGAGTGAAGTTGAGATTAAGAATCTTGTGAATAGGAACAGGGCGTTTGTGTTCTTGATGGGTAAGGATTATGAATCAGCCGTGAAGGAATATGAGGAGTGCATTGAGAGGGATGGAATGGATGTGGTAGCCATTAACAACAAGGCTATTTGTTTGATGTACTTGAGGGATTTAGCTAACTCGATTAAGGTGCTTGAAAATGCTCTTGAAAGAGTTCCTGCTGTTGCTCTCAATGAAACTGTGGTGGTCAATCTGTGTAGTATGTACGAATTGGCTTACTTTAATCACTCCGAGATTAAGAGAACGCTCAATAACTGGATTTCTCGTGTCGCTCCAGATGATTTTGATTCTTCGAGTACTCGGATTTGAGGTACTTTTGAGTTTGTTTCTTGTATGAAAATCTATTCTTTTGTTCTTTTGTTTTTTGGGTGTTACGTGAAACTTATACATTATGAAGTTGATCATTCTTGTAGCTTATGAGTTTGCTTTTAGAATGGTCTGGTTTGTTGTAGTGCCATGAAAATGGTTATATTGATTTGTTTACTGGTTATGCTGGAATAAAGGAAGAACTTAAACTAAATTGTGGTTGATGGTTCTTGTTGTATGAG

Coding sequence (CDS)

ATGGAAACCAAATCACCGCCGCCGTCACCGTCACCGGACTTTCACACTCACAGAACTTCCGATCCCGAAACCCCAACATCACCAATCTTAGAATCCACCATATCCTCCGATCCATTAACCATTCATTTCAGTTCCCTCAACGATCTCGCCCACGAGCTCGCCTCTCTTCAAGATCTCGCCAATCGCGGCTCATGGCGGTCAATTTCCGACAAGGTTTCTAGGGCAAGAAATCTCTCGCTTCTCCAAAACCCCCATGATCATCTCACTCATCTCTCTTACAACGTTCTTGCCCTAACTAAACTCCGTCGTTTCTCAGAAGCATTGGCAGAACTCGATTCGCTAGAAGATCTGGACAGCTCTCAATACAGGTACGAATCTTACCCAACTCTTTACCCTAATCGGACCGGATCTATGGTTCCCTTTTCACTCCGGTGGCTTCACGCCCTAATCCCCATCAAAATGGGGGAGCGTCAAGAAGGGTTGGACCGATTTTACCAACTTCTTGATTTTGTAAAGTCGAAATTGAACGATAAAGAAGGGAAAAACCTTGATGGGTCTGTCGATTTGTGGAAGAGAAGGGAAGTGTTTGTGGTTAATTGTATAATTGGTCATCATTTGAGTACTAAGGAATTTGGGGTTTGTTTGAGTTTGATTCATAACTTGCTTACTCGGGATTTTTCAGACCCTGCTATGATTTCGAAACTTGGGTATATACAGATGTACGTTGGTGATATTGATGGTGCTAAGCGTTCGTTTGATCTGATTGAGGAGATGGTTAAAGAAGGGAAGTGTAATGGGGTATTGAGTGAAGTTGAGATTAAGAATCTTGTGAATAGGAACAGGGCGTTTGTGTTCTTGATGGGTAAGGATTATGAATCAGCCGTGAAGGAATATGAGGAGTGCATTGAGAGGGATGGAATGGATGTGGTAGCCATTAACAACAAGGCTATTTGTTTGATGTACTTGAGGGATTTAGCTAACTCGATTAAGGTGCTTGAAAATGCTCTTGAAAGAGTTCCTGCTGTTGCTCTCAATGAAACTGTGGTGGTCAATCTGTGTAGTATGTACGAATTGGCTTACTTTAATCACTCCGAGATTAAGAGAACGCTCAATAACTGGATTTCTCGTGTCGCTCCAGATGATTTTGATTCTTCGAGTACTCGGATTTGA

Protein sequence

METKSPPPSPSPDFHTHRTSDPETPTSPILESTISSDPLTIHFSSLNDLAHELASLQDLANRGSWRSISDKVSRARNLSLLQNPHDHLTHLSYNVLALTKLRRFSEALAELDSLEDLDSSQYRYESYPTLYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYQLLDFVKSKLNDKEGKNLDGSVDLWKRREVFVVNCIIGHHLSTKEFGVCLSLIHNLLTRDFSDPAMISKLGYIQMYVGDIDGAKRSFDLIEEMVKEGKCNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEECIERDGMDVVAINNKAICLMYLRDLANSIKVLENALERVPAVALNETVVVNLCSMYELAYFNHSEIKRTLNNWISRVAPDDFDSSSTRI

Homology

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BLAST of Sed0013283 vs. NCBI nr
Match: XP_016899300.1 (PREDICTED: trafficking protein particle complex subunit 12 [Cucumis melo] >KAA0036282.1 trafficking protein particle complex subunit 12 [Cucumis melo var. makuwa] >TYK12676.1 trafficking protein particle complex subunit 12 [Cucumis melo var. makuwa])

HSP 1 Score: 638.6 bits (1646), Expect = 3.4e-179
Identity = 322/389 (82.78%), Postives = 356/389 (91.52%), Query Frame = 0


Query: 1   METKSPPPSPSPDFHTHRTSDPETPTSPILESTISSDPLTIHFSSLNDLAHELASLQDLA 60
           MET+S  PSPSPD H+H TSDPET T+ I   TISSDPLT  F SLNDLAH+L+SLQDLA
Sbjct: 1   METES--PSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLA 60

Query: 61  NRGSWRSISDKVSRARNLSLLQNPHDHLTHLSYNVLALTKLRRFSEALAELDSLEDLDSS 120
            RGSWRSI DKV+RAR LSLLQ PHDHLT+LSYNVLAL KLRRF+EALAELDSLEDL+SS
Sbjct: 61  TRGSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSS 120

Query: 121 QYRYESYPTLYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYQLLDFVKSKLNDKEG 180
           QYRYESYP++YPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFY+LLDFV+SKL DKE 
Sbjct: 121 QYRYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEE 180

Query: 181 KNLDGSVDLWKRREVFVVNCIIGHHLSTKEFGVCLSLIHNLLTRDFSDPAMISKLGYIQM 240
           K LD SV+LWK+REVFV+NCIIGHHLS KEFGVCL+LI+NLL+ DFSDPA+ISKLGYIQM
Sbjct: 181 KKLDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQM 240

Query: 241 YVGDIDGAKRSFDLIEEMVKEGKCNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEE 300
           + GDI+GAKRSF+ IEE+VKEGK +G LSEVEIKNLVNRN+A VFL+GKDY SAV+EYEE
Sbjct: 241 HAGDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEE 300

Query: 301 CIERDGMDVVAINNKAICLMYLRDLANSIKVLENALERVPAVALNETVVVNLCSMYELAY 360
           CIERD  D+VAINNKA+CLMYLRDLA+SIKVLENALERVP VALNETV+VNLCSMYELAY
Sbjct: 301 CIERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAY 360

Query: 361 FNHSEIKRTLNNWISRVAPDDFDSSSTRI 390
            NHSEIKRTLNNWI+RVAPDDFDSSSTRI
Sbjct: 361 VNHSEIKRTLNNWIARVAPDDFDSSSTRI 387

[Close]

BLAST of Sed0013283 vs. NCBI nr
Match: KAG6594864.1 (Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 637.1 bits (1642), Expect = 9.9e-179
Identity = 321/380 (84.47%), Postives = 350/380 (92.11%), Query Frame = 0


Query: 10  PSPDFHTHRTSDPETPTSPILESTISSDPLTIHFSSLNDLAHELASLQDLANRGSWRSIS 69
           PSPD  THRTSDPET TS I   TISSDPLT  FSSL+DLAHEL+SLQDLA RGSWRSI 
Sbjct: 6   PSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSWRSIL 65

Query: 70  DKVSRARNLSLLQNPHDHLTHLSYNVLALTKLRRFSEALAELDSLEDLDSSQYRYESYPT 129
           DKV+RAR+LSLLQ PHDHLT+LSYNVLAL KLRRF+E LAELDSLEDLDSSQYRYE+YP+
Sbjct: 66  DKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYETYPS 125

Query: 130 LYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYQLLDFVKSKLNDKEGKNLDGSVDL 189
           +YPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFY+LLDFV+SKL DK+ KNLD SVDL
Sbjct: 126 VYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKLKDKQEKNLDVSVDL 185

Query: 190 WKRREVFVVNCIIGHHLSTKEFGVCLSLIHNLLTRDFSDPAMISKLGYIQMYVGDIDGAK 249
           WK+REVFV+NCI+GHHLS KEFGVCLSLI NLL+RDFSDPA+ISKLGYIQM+VGDI+GAK
Sbjct: 186 WKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDIEGAK 245

Query: 250 RSFDLIEEMVKEGKCNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEECIERDGMDV 309
           RSF+ IE+MVKEGK +  LSEVEIKNLVNRN+A VFL+GKDY SAV+EYEECIERD  DV
Sbjct: 246 RSFNKIEDMVKEGKSSASLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDHTDV 305

Query: 310 VAINNKAICLMYLRDLANSIKVLENALERVPAVALNETVVVNLCSMYELAYFNHSEIKRT 369
           VAINNKA+CLMYLRDLA+SIKVLENALERVP VALNETV+VNLCSMYELAY NHSEIKRT
Sbjct: 306 VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRT 365

Query: 370 LNNWISRVAPDDFDSSSTRI 390
           LNNWI+RVAPDDFDSS TRI
Sbjct: 366 LNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of Sed0013283 vs. NCBI nr
Match: XP_022962944.1 (trafficking protein particle complex subunit 12 [Cucurbita moschata])

HSP 1 Score: 636.3 bits (1640), Expect = 1.7e-178
Identity = 321/381 (84.25%), Postives = 351/381 (92.13%), Query Frame = 0


Query: 9   SPSPDFHTHRTSDPETPTSPILESTISSDPLTIHFSSLNDLAHELASLQDLANRGSWRSI 68
           SPSPD  THRTSDPET TS I   TISSDPLT  FSSL+DLAHEL+SLQDLA RGSWRSI
Sbjct: 5   SPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSWRSI 64

Query: 69  SDKVSRARNLSLLQNPHDHLTHLSYNVLALTKLRRFSEALAELDSLEDLDSSQYRYESYP 128
            DKV+RAR+LSLLQ PHDHLT+LSYNVLAL KLRRF+E LAELDSLEDLDSSQYRYE+YP
Sbjct: 65  LDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYETYP 124

Query: 129 TLYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYQLLDFVKSKLNDKEGKNLDGSVD 188
           ++YPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFY+LLDFV+SK+ DK+ KNLD SVD
Sbjct: 125 SVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLDVSVD 184

Query: 189 LWKRREVFVVNCIIGHHLSTKEFGVCLSLIHNLLTRDFSDPAMISKLGYIQMYVGDIDGA 248
           LWK+REVFV+NCI+GHHLS KEFGVCLSLI NLL+RDFSDPA+ISKLGYIQM+VGDI+GA
Sbjct: 185 LWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDIEGA 244

Query: 249 KRSFDLIEEMVKEGKCNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEECIERDGMD 308
           KRSF+ IE+MVKEGK +  LSEVEIKNLVNRN+A VFL+GKDY SAV+EYEECIERD  D
Sbjct: 245 KRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDHTD 304

Query: 309 VVAINNKAICLMYLRDLANSIKVLENALERVPAVALNETVVVNLCSMYELAYFNHSEIKR 368
           VVAINNKA+CLMYLRDLA+SIKVLENALERVP VALNETV+VNLCSMYELAY NHSEIKR
Sbjct: 305 VVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKR 364

Query: 369 TLNNWISRVAPDDFDSSSTRI 390
           TLNNWI+RVAPDDFDSS TRI
Sbjct: 365 TLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of Sed0013283 vs. NCBI nr
Match: XP_038882977.1 (trafficking protein particle complex subunit 12 [Benincasa hispida])

HSP 1 Score: 635.2 bits (1637), Expect = 3.7e-178
Identity = 319/380 (83.95%), Postives = 351/380 (92.37%), Query Frame = 0


Query: 10  PSPDFHTHRTSDPETPTSPILESTISSDPLTIHFSSLNDLAHELASLQDLANRGSWRSIS 69
           PSP+ H+HRTSD ET TS I E TISSDPLT  F SLNDLAHEL+SLQDLA RGSWRSI 
Sbjct: 6   PSPESHSHRTSDSETLTSGIEELTISSDPLTSQFGSLNDLAHELSSLQDLAARGSWRSIL 65

Query: 70  DKVSRARNLSLLQNPHDHLTHLSYNVLALTKLRRFSEALAELDSLEDLDSSQYRYESYPT 129
           DKV+RAR+LSLLQ PHDHL +LSYNVLAL KLRRF+EALAELDSLEDLDSSQYRYESYP+
Sbjct: 66  DKVARARSLSLLQKPHDHLIYLSYNVLALVKLRRFAEALAELDSLEDLDSSQYRYESYPS 125

Query: 130 LYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYQLLDFVKSKLNDKEGKNLDGSVDL 189
           +YPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFY+LLDFV+SK+ DKE KNLD SV+L
Sbjct: 126 VYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKEEKNLDVSVNL 185

Query: 190 WKRREVFVVNCIIGHHLSTKEFGVCLSLIHNLLTRDFSDPAMISKLGYIQMYVGDIDGAK 249
           WK+R VFV+NCIIGHHLS KEFGVCL+L++NLL+ DFSDPA+ISKLGYIQM+VGDI+GAK
Sbjct: 186 WKKRVVFVINCIIGHHLSNKEFGVCLTLMNNLLSEDFSDPALISKLGYIQMHVGDIEGAK 245

Query: 250 RSFDLIEEMVKEGKCNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEECIERDGMDV 309
           RSF+ IEEMVKEGK +G LSEVEIKNLVNRN+A VFL+GKDY SAV+EYEECIERD  DV
Sbjct: 246 RSFNQIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDDSDV 305

Query: 310 VAINNKAICLMYLRDLANSIKVLENALERVPAVALNETVVVNLCSMYELAYFNHSEIKRT 369
           VAINNKA+CLMYLRDLA+SIKVLENALERVP VALNETV+VNLCSMYELAY NHSEIKRT
Sbjct: 306 VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRT 365

Query: 370 LNNWISRVAPDDFDSSSTRI 390
           LNNWI+RVAPDDFDSSSTRI
Sbjct: 366 LNNWIARVAPDDFDSSSTRI 385

[Close]

BLAST of Sed0013283 vs. NCBI nr
Match: KAG7026829.1 (Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 634.8 bits (1636), Expect = 4.9e-178
Identity = 320/380 (84.21%), Postives = 350/380 (92.11%), Query Frame = 0


Query: 10  PSPDFHTHRTSDPETPTSPILESTISSDPLTIHFSSLNDLAHELASLQDLANRGSWRSIS 69
           PSPD  THRTSDPET TS I   TISSDPLT  FSSL+DLAHEL+SLQDLA RGSWRSI 
Sbjct: 6   PSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSWRSIL 65

Query: 70  DKVSRARNLSLLQNPHDHLTHLSYNVLALTKLRRFSEALAELDSLEDLDSSQYRYESYPT 129
           DKV+RAR+LSLLQ PHDHLT+LSYNVLAL KLRRF+E LAELDSLEDLDSSQYRYE+YP+
Sbjct: 66  DKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYETYPS 125

Query: 130 LYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYQLLDFVKSKLNDKEGKNLDGSVDL 189
           +YPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFY+LLDFV+SK+ DK+ KNLD SVDL
Sbjct: 126 VYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLDVSVDL 185

Query: 190 WKRREVFVVNCIIGHHLSTKEFGVCLSLIHNLLTRDFSDPAMISKLGYIQMYVGDIDGAK 249
           WK+REVFV+NCI+GHHLS KEFGVCLSLI NLL+RDFSDPA+ISKLGYIQM+VGDI+GAK
Sbjct: 186 WKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDIEGAK 245

Query: 250 RSFDLIEEMVKEGKCNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEECIERDGMDV 309
           RSF+ IE+MVKEGK +  LSEVEIKNLVNRN+A VFL+GKDY SAV+EYEECIERD  DV
Sbjct: 246 RSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDHTDV 305

Query: 310 VAINNKAICLMYLRDLANSIKVLENALERVPAVALNETVVVNLCSMYELAYFNHSEIKRT 369
           VAINNKA+CLMYLRDLA+SIKVLENALERVP VALNETV+VNLCSMYELAY NHSEIKRT
Sbjct: 306 VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRT 365

Query: 370 LNNWISRVAPDDFDSSSTRI 390
           LNNWI+RVAPDDFDSS TRI
Sbjct: 366 LNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of Sed0013283 vs. ExPASy Swiss-Prot
Match: Q8K2L8 (Trafficking protein particle complex subunit 12 OS=Mus musculus OX=10090 GN=Trappc12 PE=1 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 4.2e-31
Identity = 103/366 (28.14%), Postives = 176/366 (48.09%), Query Frame = 0


Query: 47  NDLAHELASLQDLANRGSWRSISDKVSR---------ARNLSLLQNPHDHLTHLSYNVLA 106
           + +      L+ L +  +WR+  D   R          +N     +  D L      +  
Sbjct: 437 SSVEQSFVGLKQLISCRNWRAAVDLCGRLLTAHGQGYGKNGLPTSHTTDSLQLWFVRLAL 496

Query: 107 LTKLRRFSEALAELDSLEDLDSSQYRYESYPTLYPNRTGSMVPFSLRWLHALIPIKMGER 166
           L KL  F  A  E +   +LD     YE YP +YP R GSMVPFS+R LHA +   +G  
Sbjct: 497 LVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNP 556

Query: 167 QEGLDRFYQLLDFVKSKL-NDKEGKNLDG------------SVDLWKRREVFVVNCIIGH 226
           QE LDR +++       L N ++G   DG            SV LW+ R   V+  +   
Sbjct: 557 QESLDRLHRVKTVCSKILANLEQGLAEDGGLSSVTQESRQASVQLWRSRLGRVLYSMANC 616

Query: 227 HLSTKEFGVCLSLIHNLLT-RDFSDPAMISKLGYIQMYVGDIDGAKRSFDLIEEMVKEGK 286
            L  K++ + +     ++      +P ++S +G I + +GDI  A++ F  +E++ ++  
Sbjct: 617 LLLMKDYVLAVDAYLTVIKYYPEQEPQLLSGIGRILLQIGDIKTAEKYFQDVEKVTQK-- 676

Query: 287 CNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEECIERDGMDVVAINNKAICLMYLR 346
               L  ++ K +V  NRAF++L   ++  A K + E +  D  + VA NN A+CL+YL 
Sbjct: 677 ----LDGLQGKIMVLMNRAFLYLGQNNFAEAHKFFTEILRMDPTNAVANNNAAVCLLYLG 736

Query: 347 DLANSIKVLENALERVPAVALNETVVVNLCSMYELAYFNHSEIKRTLNNWISRVAPDDFD 390
            L +S++ LE  +++ P   L+E+V+ NL +MYEL      + K++L   ++    D F+
Sbjct: 737 KLKDSLRQLEAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQSLLEAVASKEGDSFN 796

[Close]

BLAST of Sed0013283 vs. ExPASy Swiss-Prot
Match: Q8WVT3 (Trafficking protein particle complex subunit 12 OS=Homo sapiens OX=9606 GN=TRAPPC12 PE=1 SV=3)

HSP 1 Score: 136.3 bits (342), Expect = 7.2e-31
Identity = 101/366 (27.60%), Postives = 176/366 (48.09%), Query Frame = 0


Query: 47  NDLAHELASLQDLANRGSWRSISDKVSR---------ARNLSLLQNPHDHLTHLSYNVLA 106
           + +      L+ L +  +WR+  D   R          ++  L  +  D L      +  
Sbjct: 375 DSVEQSFVGLKQLISCRNWRAAVDLCGRLLTAHGQGYGKSGLLTSHTTDSLQLWFVRLAL 434

Query: 107 LTKLRRFSEALAELDSLEDLDSSQYRYESYPTLYPNRTGSMVPFSLRWLHALIPIKMGER 166
           L KL  F  A  E +   +LD     YE YP +YP R GSMVPFS+R LHA +   +G  
Sbjct: 435 LVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNP 494

Query: 167 QEGLDRFYQLLDFVKSKL-NDKEGKNLDG------------SVDLWKRREVFVVNCIIGH 226
           QE LDR +++       L N ++G   DG            S+ LW+ R   V+  +   
Sbjct: 495 QESLDRLHKVKTVCSKILANLEQGLAEDGGMSSVTQEGRQASIRLWRSRLGRVMYSMANC 554

Query: 227 HLSTKEFGVCLSLIHNLLT-RDFSDPAMISKLGYIQMYVGDIDGAKRSFDLIEEMVKEGK 286
            L  K++ + +   H+++      +P ++S +G I + +GDI  A++ F  +E++ ++  
Sbjct: 555 LLLMKDYVLAVEAYHSVIKYYPEQEPQLLSGIGRISLQIGDIKTAEKYFQDVEKVTQK-- 614

Query: 287 CNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEECIERDGMDVVAINNKAICLMYLR 346
               L  ++ K +V  N AF+ L   ++  A + + E +  D  + VA NN A+CL+YL 
Sbjct: 615 ----LDGLQGKIMVLMNSAFLHLGQNNFAEAHRFFTEILRMDPRNAVANNNAAVCLLYLG 674

Query: 347 DLANSIKVLENALERVPAVALNETVVVNLCSMYELAYFNHSEIKRTLNNWISRVAPDDFD 390
            L +S++ LE  +++ P   L+E+V+ NL +MYEL      + K+ L   ++    D F+
Sbjct: 675 KLKDSLRQLEAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQALLEAVAGKEGDSFN 734

[Close]

BLAST of Sed0013283 vs. ExPASy TrEMBL
Match: A0A5A7SYI2 (Trafficking protein particle complex subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002640 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.6e-179
Identity = 322/389 (82.78%), Postives = 356/389 (91.52%), Query Frame = 0


Query: 1   METKSPPPSPSPDFHTHRTSDPETPTSPILESTISSDPLTIHFSSLNDLAHELASLQDLA 60
           MET+S  PSPSPD H+H TSDPET T+ I   TISSDPLT  F SLNDLAH+L+SLQDLA
Sbjct: 1   METES--PSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLA 60

Query: 61  NRGSWRSISDKVSRARNLSLLQNPHDHLTHLSYNVLALTKLRRFSEALAELDSLEDLDSS 120
            RGSWRSI DKV+RAR LSLLQ PHDHLT+LSYNVLAL KLRRF+EALAELDSLEDL+SS
Sbjct: 61  TRGSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSS 120

Query: 121 QYRYESYPTLYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYQLLDFVKSKLNDKEG 180
           QYRYESYP++YPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFY+LLDFV+SKL DKE 
Sbjct: 121 QYRYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEE 180

Query: 181 KNLDGSVDLWKRREVFVVNCIIGHHLSTKEFGVCLSLIHNLLTRDFSDPAMISKLGYIQM 240
           K LD SV+LWK+REVFV+NCIIGHHLS KEFGVCL+LI+NLL+ DFSDPA+ISKLGYIQM
Sbjct: 181 KKLDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQM 240

Query: 241 YVGDIDGAKRSFDLIEEMVKEGKCNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEE 300
           + GDI+GAKRSF+ IEE+VKEGK +G LSEVEIKNLVNRN+A VFL+GKDY SAV+EYEE
Sbjct: 241 HAGDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEE 300

Query: 301 CIERDGMDVVAINNKAICLMYLRDLANSIKVLENALERVPAVALNETVVVNLCSMYELAY 360
           CIERD  D+VAINNKA+CLMYLRDLA+SIKVLENALERVP VALNETV+VNLCSMYELAY
Sbjct: 301 CIERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAY 360

Query: 361 FNHSEIKRTLNNWISRVAPDDFDSSSTRI 390
            NHSEIKRTLNNWI+RVAPDDFDSSSTRI
Sbjct: 361 VNHSEIKRTLNNWIARVAPDDFDSSSTRI 387

[Close]

BLAST of Sed0013283 vs. ExPASy TrEMBL
Match: A0A1S4DUA2 (trafficking protein particle complex subunit 12 OS=Cucumis melo OX=3656 GN=LOC103484996 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.6e-179
Identity = 322/389 (82.78%), Postives = 356/389 (91.52%), Query Frame = 0


Query: 1   METKSPPPSPSPDFHTHRTSDPETPTSPILESTISSDPLTIHFSSLNDLAHELASLQDLA 60
           MET+S  PSPSPD H+H TSDPET T+ I   TISSDPLT  F SLNDLAH+L+SLQDLA
Sbjct: 1   METES--PSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLA 60

Query: 61  NRGSWRSISDKVSRARNLSLLQNPHDHLTHLSYNVLALTKLRRFSEALAELDSLEDLDSS 120
            RGSWRSI DKV+RAR LSLLQ PHDHLT+LSYNVLAL KLRRF+EALAELDSLEDL+SS
Sbjct: 61  TRGSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSS 120

Query: 121 QYRYESYPTLYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYQLLDFVKSKLNDKEG 180
           QYRYESYP++YPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFY+LLDFV+SKL DKE 
Sbjct: 121 QYRYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEE 180

Query: 181 KNLDGSVDLWKRREVFVVNCIIGHHLSTKEFGVCLSLIHNLLTRDFSDPAMISKLGYIQM 240
           K LD SV+LWK+REVFV+NCIIGHHLS KEFGVCL+LI+NLL+ DFSDPA+ISKLGYIQM
Sbjct: 181 KKLDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQM 240

Query: 241 YVGDIDGAKRSFDLIEEMVKEGKCNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEE 300
           + GDI+GAKRSF+ IEE+VKEGK +G LSEVEIKNLVNRN+A VFL+GKDY SAV+EYEE
Sbjct: 241 HAGDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEE 300

Query: 301 CIERDGMDVVAINNKAICLMYLRDLANSIKVLENALERVPAVALNETVVVNLCSMYELAY 360
           CIERD  D+VAINNKA+CLMYLRDLA+SIKVLENALERVP VALNETV+VNLCSMYELAY
Sbjct: 301 CIERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAY 360

Query: 361 FNHSEIKRTLNNWISRVAPDDFDSSSTRI 390
            NHSEIKRTLNNWI+RVAPDDFDSSSTRI
Sbjct: 361 VNHSEIKRTLNNWIARVAPDDFDSSSTRI 387

[Close]

BLAST of Sed0013283 vs. ExPASy TrEMBL
Match: A0A6J1HII0 (trafficking protein particle complex subunit 12 OS=Cucurbita moschata OX=3662 GN=LOC111463298 PE=4 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 8.1e-179
Identity = 321/381 (84.25%), Postives = 351/381 (92.13%), Query Frame = 0


Query: 9   SPSPDFHTHRTSDPETPTSPILESTISSDPLTIHFSSLNDLAHELASLQDLANRGSWRSI 68
           SPSPD  THRTSDPET TS I   TISSDPLT  FSSL+DLAHEL+SLQDLA RGSWRSI
Sbjct: 5   SPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSWRSI 64

Query: 69  SDKVSRARNLSLLQNPHDHLTHLSYNVLALTKLRRFSEALAELDSLEDLDSSQYRYESYP 128
            DKV+RAR+LSLLQ PHDHLT+LSYNVLAL KLRRF+E LAELDSLEDLDSSQYRYE+YP
Sbjct: 65  LDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYETYP 124

Query: 129 TLYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYQLLDFVKSKLNDKEGKNLDGSVD 188
           ++YPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFY+LLDFV+SK+ DK+ KNLD SVD
Sbjct: 125 SVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLDVSVD 184

Query: 189 LWKRREVFVVNCIIGHHLSTKEFGVCLSLIHNLLTRDFSDPAMISKLGYIQMYVGDIDGA 248
           LWK+REVFV+NCI+GHHLS KEFGVCLSLI NLL+RDFSDPA+ISKLGYIQM+VGDI+GA
Sbjct: 185 LWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDIEGA 244

Query: 249 KRSFDLIEEMVKEGKCNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEECIERDGMD 308
           KRSF+ IE+MVKEGK +  LSEVEIKNLVNRN+A VFL+GKDY SAV+EYEECIERD  D
Sbjct: 245 KRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDHTD 304

Query: 309 VVAINNKAICLMYLRDLANSIKVLENALERVPAVALNETVVVNLCSMYELAYFNHSEIKR 368
           VVAINNKA+CLMYLRDLA+SIKVLENALERVP VALNETV+VNLCSMYELAY NHSEIKR
Sbjct: 305 VVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKR 364

Query: 369 TLNNWISRVAPDDFDSSSTRI 390
           TLNNWI+RVAPDDFDSS TRI
Sbjct: 365 TLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of Sed0013283 vs. ExPASy TrEMBL
Match: A0A6J1KTF6 (trafficking protein particle complex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111497457 PE=4 SV=1)

HSP 1 Score: 633.3 bits (1632), Expect = 6.9e-178
Identity = 320/381 (83.99%), Postives = 349/381 (91.60%), Query Frame = 0


Query: 9   SPSPDFHTHRTSDPETPTSPILESTISSDPLTIHFSSLNDLAHELASLQDLANRGSWRSI 68
           SPSPD  THRTSDPET TS I   TISSDPLT  FSSL+DLAHEL+SLQDLA RGSWRSI
Sbjct: 5   SPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGSWRSI 64

Query: 69  SDKVSRARNLSLLQNPHDHLTHLSYNVLALTKLRRFSEALAELDSLEDLDSSQYRYESYP 128
            DKV+RAR+LSLLQ PHDHLT+LSYNVLAL KLRRF+E LAELDSLEDLDSSQYRYE+YP
Sbjct: 65  LDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRYETYP 124

Query: 129 TLYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYQLLDFVKSKLNDKEGKNLDGSVD 188
            +YPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFY+LLDFV+SK+ DK+ KNLD SVD
Sbjct: 125 IVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLDVSVD 184

Query: 189 LWKRREVFVVNCIIGHHLSTKEFGVCLSLIHNLLTRDFSDPAMISKLGYIQMYVGDIDGA 248
           LWK+REVFV+NCI+GHHLS KEFGVCLSLI NLL+RDFSDPA+ISKLGYIQM+VGDI+GA
Sbjct: 185 LWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGDIEGA 244

Query: 249 KRSFDLIEEMVKEGKCNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEECIERDGMD 308
           KRSF+ IE+MVKEGK +  LSEVEIKNLVNRN+A VFL+ KDY SAV+EYEECIERD  D
Sbjct: 245 KRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVSKDYLSAVREYEECIERDHTD 304

Query: 309 VVAINNKAICLMYLRDLANSIKVLENALERVPAVALNETVVVNLCSMYELAYFNHSEIKR 368
           VVAINNKA+CLMYLRDLA+SIKVLENALERVP VALNETV+VNLCSMYELAY NHSEIKR
Sbjct: 305 VVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKR 364

Query: 369 TLNNWISRVAPDDFDSSSTRI 390
           TLNNWI+RVAPDDFDSS TRI
Sbjct: 365 TLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of Sed0013283 vs. ExPASy TrEMBL
Match: A0A0A0KGA7 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500620 PE=4 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.9e-175
Identity = 316/389 (81.23%), Postives = 350/389 (89.97%), Query Frame = 0


Query: 1   METKSPPPSPSPDFHTHRTSDPETPTSPILESTISSDPLTIHFSSLNDLAHELASLQDLA 60
           MET+S  PSPSPD H+H TSDPET T+      ISSDPLT  F SLNDLAH+L SLQDLA
Sbjct: 1   METES--PSPSPDSHSHSTSDPETLTTGFENLAISSDPLTTQFGSLNDLAHDLFSLQDLA 60

Query: 61  NRGSWRSISDKVSRARNLSLLQNPHDHLTHLSYNVLALTKLRRFSEALAELDSLEDLDSS 120
            RGSWRSI DKV+RAR L+LLQ PHDHLT+LSYNVLAL KLRRF+EALAELDSLEDL+SS
Sbjct: 61  TRGSWRSILDKVARARALTLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSS 120

Query: 121 QYRYESYPTLYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYQLLDFVKSKLNDKEG 180
           QYRYESYP++YPNRTGSMVPFSLRWL ALIPIKMGERQ GLDRFY+LLDFV+SKL DKE 
Sbjct: 121 QYRYESYPSVYPNRTGSMVPFSLRWLQALIPIKMGERQHGLDRFYELLDFVQSKLKDKEE 180

Query: 181 KNLDGSVDLWKRREVFVVNCIIGHHLSTKEFGVCLSLIHNLLTRDFSDPAMISKLGYIQM 240
           K LD SV+LWK+R VFV+NCIIGHHLS KEFGVCL+LI+NLL+ DFSDPA+ISKLGYIQM
Sbjct: 181 KKLDVSVNLWKKRVVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQM 240

Query: 241 YVGDIDGAKRSFDLIEEMVKEGKCNGVLSEVEIKNLVNRNRAFVFLMGKDYESAVKEYEE 300
           + GDI+GAKRSF+ IEE+VKEGK +G LSEVE+KNLVNRN+A VFL+GKDY SAV+EYEE
Sbjct: 241 HAGDIEGAKRSFNRIEELVKEGKSSGSLSEVEMKNLVNRNKALVFLVGKDYLSAVREYEE 300

Query: 301 CIERDGMDVVAINNKAICLMYLRDLANSIKVLENALERVPAVALNETVVVNLCSMYELAY 360
           CIERD  D+VAINNKA+CLMYLRDLA+SIKVLENALERVP VALNETV+VNLCSMYELAY
Sbjct: 301 CIERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAY 360

Query: 361 FNHSEIKRTLNNWISRVAPDDFDSSSTRI 390
            NHSEIKRTLNNWI+RVAPDDFDSSSTRI
Sbjct: 361 VNHSEIKRTLNNWIARVAPDDFDSSSTRI 387

[Close]

BLAST of Sed0013283 vs. TAIR 10
Match: AT4G39820.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 467.6 bits (1202), Expect = 9.6e-132
Identity = 229/400 (57.25%), Postives = 305/400 (76.25%), Query Frame = 0


Query: 1   METKSPPPSPSPDFHTHRT--------SDPETPTSPILES---TISSDPLTIHFSSLNDL 60
           M+   P     P+F+   T        +D   PT+  L S   T  +D     F+SL++L
Sbjct: 9   MDPDLPESETRPEFNPSSTDSTAMAESTDAGEPTAFELASSQVTSVADLPPERFNSLDEL 68

Query: 61  AHELASLQDLANRGSWRSISDKVSRARNLSLLQNPHDHLTHLSYNVLALTKLRRFSEALA 120
            H+L SL +L+ RGSW++I +K+S+AR L LL  PH+HLT+L+Y V+AL KLRR  EA  
Sbjct: 69  THDLGSLHELSTRGSWQAILEKISQARALFLLTKPHEHLTYLTYQVMALAKLRRSDEASH 128

Query: 121 ELDSLEDLDSSQYRYESYPTLYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYQLLD 180
           EL+SL D D + YRYES+P +YPNR GSMVPFSLRWL+ALIP K+G RQEGLDR Y LLD
Sbjct: 129 ELNSLHDFDGTHYRYESFPEIYPNRRGSMVPFSLRWLYALIPTKLGNRQEGLDRLYVLLD 188

Query: 181 FVKSKLNDKEGKNLDGSVDLWKRREVFVVNCIIGHHLSTKEFGVCLSLIHNLLTRDFSDP 240
           FV+ ++ +KE ++L+ SV+LWK+RE FV+NC++G HL  KEFGV L L+  L+ RD  DP
Sbjct: 189 FVRDRIREKESQSLESSVELWKKRETFVMNCLLGFHLGHKEFGVSLDLMKELINRDPLDP 248

Query: 241 AMISKLGYIQMYVGDIDGAKRSFDLIEEMVKEGKCNGVLSEVEIKNLVNRNRAFVFLMGK 300
            +ISKLG +QM  GD++GAK +FD +E+M+ EGK NG+L+E++  NLV RN+A V+++ K
Sbjct: 249 VLISKLGSVQMQFGDVEGAKTTFDRVEKMLNEGKSNGLLNEIQFNNLVGRNKALVYVVAK 308

Query: 301 DYESAVKEYEECIERDGMDVVAINNKAICLMYLRDLANSIKVLENALERVPAVALNETVV 360
           DY SAV+EY++CIERD  D++A+NNKA+CLMYLRDL+++IKV+E+ALERVP  ALNE++V
Sbjct: 309 DYVSAVREYDKCIERDNSDIIAVNNKALCLMYLRDLSDAIKVMESALERVPTAALNESLV 368

Query: 361 VNLCSMYELAYFNHSEIKRTLNNWISRVAPDDFDSSSTRI 390
           VNLCSMYELAY NH+++KRTLNNWI+RVAPDDFDSS TR+
Sbjct: 369 VNLCSMYELAYVNHTDVKRTLNNWIARVAPDDFDSSCTRV 408

The following BLAST results are available for this feature:

BLAST of Sed0013283 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899300.1	3.4e-179	82.78	PREDICTED: trafficking protein particle complex subunit 12 [Cucumis melo] >KAA00...	[more]
KAG6594864.1	9.9e-179	84.47	Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma...	[more]
XP_022962944.1	1.7e-178	84.25	trafficking protein particle complex subunit 12 [Cucurbita moschata]	[more]
XP_038882977.1	3.7e-178	83.95	trafficking protein particle complex subunit 12 [Benincasa hispida]	[more]
KAG7026829.1	4.9e-178	84.21	Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma...	[more]

BLAST of Sed0013283 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8K2L8	4.2e-31	28.14	Trafficking protein particle complex subunit 12 OS=Mus musculus OX=10090 GN=Trap...	[more]
Q8WVT3	7.2e-31	27.60	Trafficking protein particle complex subunit 12 OS=Homo sapiens OX=9606 GN=TRAPP...	[more]

BLAST of Sed0013283 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYI2	1.6e-179	82.78	Trafficking protein particle complex subunit 12 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S4DUA2	1.6e-179	82.78	trafficking protein particle complex subunit 12 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1HII0	8.1e-179	84.25	trafficking protein particle complex subunit 12 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KTF6	6.9e-178	83.99	trafficking protein particle complex subunit 12 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0KGA7	1.9e-175	81.23	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500620 ...	[more]

BLAST of Sed0013283 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39820.1	9.6e-132	57.25	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 275..308 e-value: 40.0 score: 9.6 coord: 309..342 e-value: 3.4 score: 16.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 204..374 e-value: 7.8E-12 score: 47.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 222..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR21581:SF28	F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED	coord: 37..388
None	No IPR available	PANTHER	PTHR21581	D-ALANYL-D-ALANINE CARBOXYPEPTIDASE	coord: 37..388

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013283.1	Sed0013283.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity