Sed0013282 (gene) Chayote v1

Overview


Name	Sed0013282
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Location	LG06: 46324007 .. 46325107 (+)
RNA-Seq Expression	Sed0013282
Synteny	Sed0013282

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGAATCCACTCACTTAGTTGCCTGTGTAATCAAACCCATTCCAATTTCTTCTTCTTCCTCTGCTCTGATCACTCTCGTCGGCAGCCATGGAAGACGACTTCAAACTCAGTCAACATTCCGGCGACTCAGTCACCATCAACCTCCCCGGAATGGTCATCGCCGCCGCCATTTTTGTCTTCTTATTTGTCCTCGTATTTGTTCTTCTTCTCCAGCTCTACGCCAAATTGATATGGGCTTACATTGATGATCTCACCCCACTTCCGCCACAAACTCGCCCCCGCCGCCGATTCGAATTCTCCGCCGTCCAAGACCCCAATTCCGGAAAAGGGTTGGACGCCGCCGTCCTCCGATCACTCCCCGTTCTGATATTCCACTCCGATGACTTCAAAGATGCGCTTGAATGCGCTGTTTGCCTCTCCGAACTCGTCGACGGCGAAAAGGCGAAGCTGCTTCATGGTTGCTCCCATGGCTTCCATAGTGATTGTATCGATATGTGGTTTCAGTCCCATTCCACTTGCCCCCTCTGCCGGAACCCCGTCACCGCCGCCGTGGACCCCGACGAGTCGCCGGAGGAGGGTTCTGCACCTGGGTTGTCCTCGGAATCTCCAACTTTCCCTACAAATGTATTGATTTGGGGGAATCAAGTCCAGATCGCCTCCGCCGGAGCATCTTCATCGGCGCCGGCGCCGGAAAGTCAACCGGATGCAGAATTGGCAATTGATGTACAGAGCGATATTCAATTTCCGCCATCGGAGCTTAATGAGGATGGAAAGTTGCAAATTCCCACTAGATTGAGGTCATTGAAGAGGCTTTTGAGTAGGCAAAGAAGATTGAATCTTTGTAATTCAAATTCAGCCTGTGTTGAAATGGAACAATTGGCTTGACAGGCTAAGAACAGTTTTCAGCAGCTGCTCTGTTTTTTGTTTTTTACTATGTCACAAACAAGTTCAAACCTTCAAAACATTTTCAAATATCTTGTAATGAAAGGAAAAGTCTTGTTCAAGAGCTCTCTAATCTCTTCAGAATATGCTTACATTAAGAAATTTTCAATCCAGTCAAAAAGAGTATAGTTATTAGTTAGAGTGACATCATGTACGAC

mRNA sequence

ATTGAATCCACTCACTTAGTTGCCTGTGTAATCAAACCCATTCCAATTTCTTCTTCTTCCTCTGCTCTGATCACTCTCGTCGGCAGCCATGGAAGACGACTTCAAACTCAGTCAACATTCCGGCGACTCAGTCACCATCAACCTCCCCGGAATGGTCATCGCCGCCGCCATTTTTGTCTTCTTATTTGTCCTCGTATTTGTTCTTCTTCTCCAGCTCTACGCCAAATTGATATGGGCTTACATTGATGATCTCACCCCACTTCCGCCACAAACTCGCCCCCGCCGCCGATTCGAATTCTCCGCCGTCCAAGACCCCAATTCCGGAAAAGGGTTGGACGCCGCCGTCCTCCGATCACTCCCCGTTCTGATATTCCACTCCGATGACTTCAAAGATGCGCTTGAATGCGCTGTTTGCCTCTCCGAACTCGTCGACGGCGAAAAGGCGAAGCTGCTTCATGGTTGCTCCCATGGCTTCCATAGTGATTGTATCGATATGTGGTTTCAGTCCCATTCCACTTGCCCCCTCTGCCGGAACCCCGTCACCGCCGCCGTGGACCCCGACGAGTCGCCGGAGGAGGGTTCTGCACCTGGGTTGTCCTCGGAATCTCCAACTTTCCCTACAAATGTATTGATTTGGGGGAATCAAGTCCAGATCGCCTCCGCCGGAGCATCTTCATCGGCGCCGGCGCCGGAAAGTCAACCGGATGCAGAATTGGCAATTGATGTACAGAGCGATATTCAATTTCCGCCATCGGAGCTTAATGAGGATGGAAAGTTGCAAATTCCCACTAGATTGAGGTCATTGAAGAGGCTTTTGAGTAGGCAAAGAAGATTGAATCTTTGTAATTCAAATTCAGCCTGTGTTGAAATGGAACAATTGGCTTGACAGGCTAAGAACAGTTTTCAGCAGCTGCTCTGTTTTTTGTTTTTTACTATGTCACAAACAAGTTCAAACCTTCAAAACATTTTCAAATATCTTGTAATGAAAGGAAAAGTCTTGTTCAAGAGCTCTCTAATCTCTTCAGAATATGCTTACATTAAGAAATTTTCAATCCAGTCAAAAAGAGTATAGTTATTAGTTAGAGTGACATCATGTACGAC

Coding sequence (CDS)

ATGGAAGACGACTTCAAACTCAGTCAACATTCCGGCGACTCAGTCACCATCAACCTCCCCGGAATGGTCATCGCCGCCGCCATTTTTGTCTTCTTATTTGTCCTCGTATTTGTTCTTCTTCTCCAGCTCTACGCCAAATTGATATGGGCTTACATTGATGATCTCACCCCACTTCCGCCACAAACTCGCCCCCGCCGCCGATTCGAATTCTCCGCCGTCCAAGACCCCAATTCCGGAAAAGGGTTGGACGCCGCCGTCCTCCGATCACTCCCCGTTCTGATATTCCACTCCGATGACTTCAAAGATGCGCTTGAATGCGCTGTTTGCCTCTCCGAACTCGTCGACGGCGAAAAGGCGAAGCTGCTTCATGGTTGCTCCCATGGCTTCCATAGTGATTGTATCGATATGTGGTTTCAGTCCCATTCCACTTGCCCCCTCTGCCGGAACCCCGTCACCGCCGCCGTGGACCCCGACGAGTCGCCGGAGGAGGGTTCTGCACCTGGGTTGTCCTCGGAATCTCCAACTTTCCCTACAAATGTATTGATTTGGGGGAATCAAGTCCAGATCGCCTCCGCCGGAGCATCTTCATCGGCGCCGGCGCCGGAAAGTCAACCGGATGCAGAATTGGCAATTGATGTACAGAGCGATATTCAATTTCCGCCATCGGAGCTTAATGAGGATGGAAAGTTGCAAATTCCCACTAGATTGAGGTCATTGAAGAGGCTTTTGAGTAGGCAAAGAAGATTGAATCTTTGTAATTCAAATTCAGCCTGTGTTGAAATGGAACAATTGGCTTGA

Protein sequence

MEDDFKLSQHSGDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDLTPLPPQTRPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEKAKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAVDPDESPEEGSAPGLSSESPTFPTNVLIWGNQVQIASAGASSSAPAPESQPDAELAIDVQSDIQFPPSELNEDGKLQIPTRLRSLKRLLSRQRRLNLCNSNSACVEMEQLA

Homology

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BLAST of Sed0013282 vs. NCBI nr
Match: KAG7018248.1 (RING-H2 finger protein ATL3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 387.5 bits (994), Expect = 9.3e-104
Identity = 203/281 (72.24%), Postives = 226/281 (80.43%), Query Frame = 0


Query: 1   MEDDFKLSQHSGDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDLTPLPP 60
           MEDD+KLSQHSGDSVTI LPGMVI  AI VFL VLVFVLLLQLYA+ +W+ I+D +PLP 
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  QT--RPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEK 120
           +T  R RRRFEFSA+QDPNSG+GLD  +LRSLPVLIFH DDFKD LECAVCLS+LV+GEK
Sbjct: 61  ETRRRRRRRFEFSAIQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAVDPDESPEEGSAPGLSSESPTFPT 180
           AKLLH C HGFHSDCIDMWF+SHSTCPLCRNPVTAA D  E  +E SA GLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFESHSTCPLCRNPVTAAADSGELQDEDSASGLSSESPTFPT 180

Query: 181 NVLIWGNQVQIASAGA--------------SSSAPAPESQPDAELAIDVQSDIQFPPSEL 240
           NVLIWGNQ Q+ SAGA              ++S+ A  S P AEL IDVQ+D+QFPP   
Sbjct: 181 NVLIWGNQEQVTSAGACLEVEEGSSQNPFPATSSSASSSNPAAELVIDVQNDLQFPPLAP 240

Query: 241 NEDGKLQIPTRLRSLKRLLSRQRRLNLCNSNSACVEMEQLA 266
           NEDGKL + TRLRSLKRLLSRQRR+N C+ NSA VEMEQLA
Sbjct: 241 NEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQLA 281

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BLAST of Sed0013282 vs. NCBI nr
Match: XP_022955893.1 (RING-H2 finger protein ATL3-like [Cucurbita moschata])

HSP 1 Score: 386.7 bits (992), Expect = 1.6e-103
Identity = 205/281 (72.95%), Postives = 225/281 (80.07%), Query Frame = 0


Query: 1   MEDDFKLSQHSGDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDLTPLPP 60
           MEDD+KLSQHSGDSVTI LPGMVI  AI VFL VLVFVLLLQLYA+ +W+ I+D +PLP 
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  QT--RPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEK 120
           +T  R RRRFEFSA+QDPNSG+GLD  +LRSLPVLIFH DDFKD LECAVCLS+LV+GEK
Sbjct: 61  ETRRRRRRRFEFSAIQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAVDPDESPEEGSAPGLSSESPTFPT 180
           AKLLH C HGFHSDCIDMWF+SHSTCPLCRNPVTAA D  E  +E SA GLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFESHSTCPLCRNPVTAAADSGELQDEDSASGLSSESPTFPT 180

Query: 181 NVLIWGNQVQIASAGA-------SSSAPAP-------ESQPDAELAIDVQSDIQFPPSEL 240
           NVLIWGNQ Q+ SAGA       SS  P P        S P AEL IDVQ+D+QFPP   
Sbjct: 181 NVLIWGNQEQVTSAGACLEVKEGSSQNPFPAACSSASSSNPAAELVIDVQNDLQFPPLTP 240

Query: 241 NEDGKLQIPTRLRSLKRLLSRQRRLNLCNSNSACVEMEQLA 266
           NEDGKL + TRLRSLKRLLSRQRR+N C+ NSA VEMEQLA
Sbjct: 241 NEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQLA 281

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BLAST of Sed0013282 vs. NCBI nr
Match: XP_023527880.1 (RING-H2 finger protein ATL3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386.7 bits (992), Expect = 1.6e-103
Identity = 203/281 (72.24%), Postives = 225/281 (80.07%), Query Frame = 0


Query: 1   MEDDFKLSQHSGDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDLTPLPP 60
           MEDD+KLSQHSGDSVTI LPGMVI  AI VFL VLVFVLLLQLYA+ +W+ I+D +PLP 
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  QT--RPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEK 120
           +T  R RRRFEFSA+ DPNSG+GLD  +LRSLPVLIFH DDFKD LECAVCLS+LV+GEK
Sbjct: 61  ETRRRRRRRFEFSAIHDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAVDPDESPEEGSAPGLSSESPTFPT 180
           AKLLH C HGFHSDCIDMWFQSHSTCPLCRNPVTAA D  E  +E SA GLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAADSGELQDEDSATGLSSESPTFPT 180

Query: 181 NVLIWGNQVQIASAGA--------------SSSAPAPESQPDAELAIDVQSDIQFPPSEL 240
           NVLIWGNQ Q+ SAGA              ++S+ A  S P AEL IDVQ+D+QFPP   
Sbjct: 181 NVLIWGNQEQVTSAGACLEVEESSSQNPFPATSSSASSSNPAAELVIDVQNDLQFPPLAP 240

Query: 241 NEDGKLQIPTRLRSLKRLLSRQRRLNLCNSNSACVEMEQLA 266
           NEDGKL + TRLRSLKRLLSRQRR+N C+ NSA VEMEQLA
Sbjct: 241 NEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQLA 281

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BLAST of Sed0013282 vs. NCBI nr
Match: KAG6581797.1 (RING-H2 finger protein ATL3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 384.8 bits (987), Expect = 6.0e-103
Identity = 202/281 (71.89%), Postives = 225/281 (80.07%), Query Frame = 0


Query: 1   MEDDFKLSQHSGDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDLTPLPP 60
           MEDD+KLSQHSGDSVTI LPGMVI  AI VFL VLVFVLLLQLYA+ +W+ I+D +PLP 
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  QT--RPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEK 120
           +T  R RRRFEFSA+QDPNSG+GLD  +LRSLPVLIFH DDFKD LECAVCLS+LV+GEK
Sbjct: 61  ETRRRRRRRFEFSAIQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAVDPDESPEEGSAPGLSSESPTFPT 180
           AKLLH C HGFHSDCIDMWF+SHSTCPLCRNPVTAA D     +E SA GLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFESHSTCPLCRNPVTAAADSGGLQDEDSASGLSSESPTFPT 180

Query: 181 NVLIWGNQVQIASAGA--------------SSSAPAPESQPDAELAIDVQSDIQFPPSEL 240
           NVLIWGNQ Q+ SAGA              ++S+ A  S P AEL IDVQ+D+QFPP   
Sbjct: 181 NVLIWGNQEQVTSAGACLEVEEGSSQNPFPATSSSASSSNPAAELVIDVQNDLQFPPLAP 240

Query: 241 NEDGKLQIPTRLRSLKRLLSRQRRLNLCNSNSACVEMEQLA 266
           NEDGKL + TRLRSLKRLLSRQRR+N C+ NSA VEMEQLA
Sbjct: 241 NEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQLA 281

[Close]

BLAST of Sed0013282 vs. NCBI nr
Match: XP_022980687.1 (RING-H2 finger protein ATL60-like [Cucurbita maxima])

HSP 1 Score: 384.4 bits (986), Expect = 7.8e-103
Identity = 203/281 (72.24%), Postives = 224/281 (79.72%), Query Frame = 0


Query: 1   MEDDFKLSQHSGDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDLTPLPP 60
           MEDD+KLSQHSGDSV+I LPGMVI  AI VFL VLVFVLLLQLYA+ +W+ I+D TPLP 
Sbjct: 1   MEDDYKLSQHSGDSVSIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60

Query: 61  QT--RPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEK 120
           +T  R RRRFEFSAVQDPNSG+GLD  +LRSLPVLIFH DDFKD LECAVCLS+LV+GEK
Sbjct: 61  ETRRRRRRRFEFSAVQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAVDPDESPEEGSAPGLSSESPTFPT 180
           AKLLH C HGFHSDCIDMWFQSHSTCPLCRNPVTAA D  E  +E SA GLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAADSGELQDEDSATGLSSESPTFPT 180

Query: 181 NVLIWGNQVQIASAGA--------------SSSAPAPESQPDAELAIDVQSDIQFPPSEL 240
           NVLIWGNQ Q+ SAGA              ++S+ A  S   AEL IDVQ+D+QFPP   
Sbjct: 181 NVLIWGNQEQVTSAGACLEVEEGSSQNPFPATSSSASSSNQAAELVIDVQNDLQFPPLAP 240

Query: 241 NEDGKLQIPTRLRSLKRLLSRQRRLNLCNSNSACVEMEQLA 266
           NEDGKL + TRLRSLKRLLSRQRR+N C+ NS  VEMEQLA
Sbjct: 241 NEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSGNVEMEQLA 281

[Close]

BLAST of Sed0013282 vs. ExPASy Swiss-Prot
Match: Q9XF63 (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.0e-42
Identity = 118/312 (37.82%), Postives = 155/312 (49.68%), Query Frame = 0


Query: 4   DFKLSQHS---GDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDL----- 63
           D   S HS   GD  T  +   +I  AI V    ++FVL+L LYAKL W  ID L     
Sbjct: 2   DDNRSTHSSMFGDLSTEEVTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQ 61

Query: 64  ---------------TPLPPQTRPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDF 123
                           P     R RRRF F   QD  S  GL +  L SLP++ F  D  
Sbjct: 62  QQQQEQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQDSC 121

Query: 124 KDALECAVCLSELVDGEKAKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAVD---- 183
           KD LEC++CLSELV G+KA+LL  C+H FH +CIDMWFQSHSTCP+CRN V         
Sbjct: 122 KDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSK 181

Query: 184 -----PDESPEEGSAPG-------LSSESPTFPTNVLIWGNQVQIASAGAS------SSA 243
                PD +   G+          LS+ SP FPTNVL+WG Q Q+++   +       +A
Sbjct: 182 RVEQVPDNAENAGTTNNNHDALSQLSTSSPEFPTNVLVWGRQDQVSTGNTNVGTQEDGAA 241

Query: 244 PAPESQPDAELAIDV-------------QSDIQFPPSELNEDGKLQIPTRLRSLKRLLSR 258
               SQ    + +D+              S ++F   E  E+ K  + TRLRSL+R LSR
Sbjct: 242 GNGASQSQEAVVLDISDSSSRNHNVSSSSSSMRFIVEE--EEAKSPMTTRLRSLRRFLSR 301

[Close]

BLAST of Sed0013282 vs. ExPASy Swiss-Prot
Match: P0C035 (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.6e-37
Identity = 107/286 (37.41%), Postives = 146/286 (51.05%), Query Frame = 0


Query: 21  GMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYI------------DDLTPLPPQTRPRRRF 80
           G V+  +I      ++F+LLL LYA+L W  +            D  + +  +   RRRF
Sbjct: 22  GKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRRRRF 81

Query: 81  EFSAVQ-DPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEKAKLLHGCSH 140
            F+  Q DP    GLD+ +L+S+ V++F   DFKD LECAVCLS+LVDG+KA++L  C+H
Sbjct: 82  VFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPRCNH 141

Query: 141 GFHSDCIDMWFQSHSTCPLCRNPVTAAVDPDESPEEGSAPG------------------- 200
           GFH DCIDMWFQSHSTCPLCRN V +  D      EG                       
Sbjct: 142 GFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTHGGSEGLPQNQNFESGHSTNQHNPSQDQS 201

Query: 201 ----LSSESPTFPTNVLIWGNQVQIASAGASSSAPAP------------------ESQPD 251
                S+E  +FPTNVL+WG+Q Q+ SAG   +  +P                   SQ  
Sbjct: 202 FVHEFSTEPLSFPTNVLVWGDQNQVRSAGLVVTEESPSGNFAASYNDHQQESSSTRSQEV 261

[Close]

BLAST of Sed0013282 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-22
Identity = 60/146 (41.10%), Postives = 84/146 (57.53%), Query Frame = 0


Query: 14  SVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYI-DDLTPLPPQTRPRRRFEFSA 73
           S T  + G ++ +AI +  FV++ ++ L LYA+  W  +      L  ++R RR      
Sbjct: 21  SKTYAMSGKIMLSAIVILFFVVILMVFLHLYAR--WYLLRARRRHLRRRSRNRRATMVFF 80

Query: 74  VQDPN-------SGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEKAKLLHGC 133
             DP+       + +GLD  V++SLPV  F  +  KD +ECAVCLSE  + E  ++L  C
Sbjct: 81  TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNC 140

Query: 134 SHGFHSDCIDMWFQSHSTCPLCRNPV 152
            H FH DCIDMWF SHSTCPLCR+ V
Sbjct: 141 QHTFHVDCIDMWFHSHSTCPLCRSLV 164

[Close]

BLAST of Sed0013282 vs. ExPASy Swiss-Prot
Match: Q9LRB7 (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.1e-21
Identity = 83/247 (33.60%), Postives = 123/247 (49.80%), Query Frame = 0


Query: 24  IAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDLTPLPPQTRPRRRFEFSAVQDPNSGKGLD 83
           +AA + VF  + +  +LLQ Y       +   +      RPR R    +  D  +G G+D
Sbjct: 41  VAAVLIVFAALTLAFVLLQCYCDERRRAVTTTSTSGRGRRPRPRRRSGSGGDGGTGGGVD 100

Query: 84  AAVLRSLPVLIF-----------HSDDFKDALECAVCLSELVDGEKAKLLHGCSHGFHSD 143
             VLRSLPV ++             ++  D +ECAVCL+EL DGE+A+ L  C HGFH++
Sbjct: 101 PEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAE 160

Query: 144 CIDMWFQSHSTCPLCRNPVTAAVDPDESPEEGSAPGLSSESPTFPTNVLIWGNQVQIASA 203
           C+DMW  SHSTCPLCR  +T  V P   P     P  +S + + P +VL+      ++  
Sbjct: 161 CVDMWLGSHSTCPLCR--LTVVVPPPPLPPVPPEPP-ASYTVSLPASVLL-----GLSDH 220

Query: 204 GASSSAPAPESQPDAELAIDV-QSDIQFPPSELNEDGKLQIPTRLRSLKRLLSRQRRLNL 259
           GA +     E +  + L I++ +S     P +        +  RLRSL+RL S  R+   
Sbjct: 221 GAGAVTMTAEGR--STLVIEIPESAASTTPRDAAARSSPSL-ARLRSLRRLWSFGRQ-GA 275

[Close]

BLAST of Sed0013282 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.3e-19
Identity = 57/164 (34.76%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 23  VIAAAIFVFLFVLVFVLLLQLYAKLIWA-YIDDLTPLPPQTRPRRR-------------- 82
           V+ AA+   L V++FVLLL  YA+  W+    D +      R RRR              
Sbjct: 29  VLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRRRRNRRRTVTTTRIIPS 88

Query: 83  ---------FEFSAVQDPNSGKGLDAAVLRSLPVLIF--HSDDFKDALECAVCLSELVDG 142
                        A       KGLD++V+ S+P+ ++  + ++  +  EC +CL     G
Sbjct: 89  LPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAG 148

Query: 143 EKAKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAVDPDES 161
           +  + L  C HGFH +CIDMW  SHSTCPLCR+PV AAV  +E+
Sbjct: 149 DFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

[Close]

BLAST of Sed0013282 vs. ExPASy TrEMBL
Match: A0A6J1GV98 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111457742 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 7.7e-104
Identity = 205/281 (72.95%), Postives = 225/281 (80.07%), Query Frame = 0


Query: 1   MEDDFKLSQHSGDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDLTPLPP 60
           MEDD+KLSQHSGDSVTI LPGMVI  AI VFL VLVFVLLLQLYA+ +W+ I+D +PLP 
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  QT--RPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEK 120
           +T  R RRRFEFSA+QDPNSG+GLD  +LRSLPVLIFH DDFKD LECAVCLS+LV+GEK
Sbjct: 61  ETRRRRRRRFEFSAIQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAVDPDESPEEGSAPGLSSESPTFPT 180
           AKLLH C HGFHSDCIDMWF+SHSTCPLCRNPVTAA D  E  +E SA GLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFESHSTCPLCRNPVTAAADSGELQDEDSASGLSSESPTFPT 180

Query: 181 NVLIWGNQVQIASAGA-------SSSAPAP-------ESQPDAELAIDVQSDIQFPPSEL 240
           NVLIWGNQ Q+ SAGA       SS  P P        S P AEL IDVQ+D+QFPP   
Sbjct: 181 NVLIWGNQEQVTSAGACLEVKEGSSQNPFPAACSSASSSNPAAELVIDVQNDLQFPPLTP 240

Query: 241 NEDGKLQIPTRLRSLKRLLSRQRRLNLCNSNSACVEMEQLA 266
           NEDGKL + TRLRSLKRLLSRQRR+N C+ NSA VEMEQLA
Sbjct: 241 NEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQLA 281

[Close]

BLAST of Sed0013282 vs. ExPASy TrEMBL
Match: A0A6J1IRZ5 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111479984 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.8e-103
Identity = 203/281 (72.24%), Postives = 224/281 (79.72%), Query Frame = 0


Query: 1   MEDDFKLSQHSGDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDLTPLPP 60
           MEDD+KLSQHSGDSV+I LPGMVI  AI VFL VLVFVLLLQLYA+ +W+ I+D TPLP 
Sbjct: 1   MEDDYKLSQHSGDSVSIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60

Query: 61  QT--RPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEK 120
           +T  R RRRFEFSAVQDPNSG+GLD  +LRSLPVLIFH DDFKD LECAVCLS+LV+GEK
Sbjct: 61  ETRRRRRRRFEFSAVQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAVDPDESPEEGSAPGLSSESPTFPT 180
           AKLLH C HGFHSDCIDMWFQSHSTCPLCRNPVTAA D  E  +E SA GLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAADSGELQDEDSATGLSSESPTFPT 180

Query: 181 NVLIWGNQVQIASAGA--------------SSSAPAPESQPDAELAIDVQSDIQFPPSEL 240
           NVLIWGNQ Q+ SAGA              ++S+ A  S   AEL IDVQ+D+QFPP   
Sbjct: 181 NVLIWGNQEQVTSAGACLEVEEGSSQNPFPATSSSASSSNQAAELVIDVQNDLQFPPLAP 240

Query: 241 NEDGKLQIPTRLRSLKRLLSRQRRLNLCNSNSACVEMEQLA 266
           NEDGKL + TRLRSLKRLLSRQRR+N C+ NS  VEMEQLA
Sbjct: 241 NEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSGNVEMEQLA 281

[Close]

BLAST of Sed0013282 vs. ExPASy TrEMBL
Match: A0A5A7UJD5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G001230 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.8e-100
Identity = 200/281 (71.17%), Postives = 221/281 (78.65%), Query Frame = 0


Query: 1   MEDDFKLSQHSGDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDLTPLPP 60
           MED++KLSQHSGDSVTI LPGMVI  AI VF  VLVFVLLLQLYAK +W+ I+D TPLP 
Sbjct: 1   MEDEYKLSQHSGDSVTIELPGMVIITAILVFFLVLVFVLLLQLYAKWLWSRIEDPTPLPL 60

Query: 61  QT--RPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEK 120
           +T  R RRRFEFSAV DPNS +GLD  VLRSLPV+IFH DDFKD LECAVCLS+LV+GEK
Sbjct: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAV-DPDESPEEGSAPGLSSESPTFP 180
           AKLLH C HGFHSDCIDMWFQSHSTCPLCRNPVT AV D  E  +E S  GLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAVADTAELHDEDSTSGLSSESPTFP 180

Query: 181 TNVLIWGNQVQIASAGA--------------SSSAPAPESQPDAELAIDVQSDIQFPPSE 240
           TNVLIWGNQ Q+ SAGA              ++S+ A  + PDAEL IDVQ+++QFPP  
Sbjct: 181 TNVLIWGNQGQVTSAGALLEVEEGPSQNHFPAASSSASTTYPDAELVIDVQNEVQFPPLT 240

Query: 241 LNEDGKLQIPTRLRSLKRLLSRQRRLNLCNSNSACVEMEQL 265
            NEDGKL + TRLRSLKRLLSRQRR+N CNSNSA  E EQL
Sbjct: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQL 281

[Close]

BLAST of Sed0013282 vs. ExPASy TrEMBL
Match: A0A1S3CCE4 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499208 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.8e-100
Identity = 200/281 (71.17%), Postives = 221/281 (78.65%), Query Frame = 0


Query: 1   MEDDFKLSQHSGDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDLTPLPP 60
           MED++KLSQHSGDSVTI LPGMVI  AI VF  VLVFVLLLQLYAK +W+ I+D TPLP 
Sbjct: 1   MEDEYKLSQHSGDSVTIELPGMVIITAILVFFLVLVFVLLLQLYAKWLWSRIEDPTPLPL 60

Query: 61  QT--RPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEK 120
           +T  R RRRFEFSAV DPNS +GLD  VLRSLPV+IFH DDFKD LECAVCLS+LV+GEK
Sbjct: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAV-DPDESPEEGSAPGLSSESPTFP 180
           AKLLH C HGFHSDCIDMWFQSHSTCPLCRNPVT AV D  E  +E S  GLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAVADTAELHDEDSTSGLSSESPTFP 180

Query: 181 TNVLIWGNQVQIASAGA--------------SSSAPAPESQPDAELAIDVQSDIQFPPSE 240
           TNVLIWGNQ Q+ SAGA              ++S+ A  + PDAEL IDVQ+++QFPP  
Sbjct: 181 TNVLIWGNQGQVTSAGALLEVEEGPSQNHFPAASSSASTTYPDAELVIDVQNEVQFPPLT 240

Query: 241 LNEDGKLQIPTRLRSLKRLLSRQRRLNLCNSNSACVEMEQL 265
            NEDGKL + TRLRSLKRLLSRQRR+N CNSNSA  E EQL
Sbjct: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQL 281

[Close]

BLAST of Sed0013282 vs. ExPASy TrEMBL
Match: A0A0A0L962 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G646670 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 7.4e-99
Identity = 197/281 (70.11%), Postives = 219/281 (77.94%), Query Frame = 0


Query: 1   MEDDFKLSQHSGDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDLTPLPP 60
           MED++KLSQHS DSV+I LPGMVI  AI VF  +LVFVLLLQLYAK +W+ I+D TPLP 
Sbjct: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60

Query: 61  QT--RPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEK 120
           +T  R RRRFEFSAV DPNS +GLD  VLRSLPV+IFH DDFKD LECAVCLS+LV+GEK
Sbjct: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPV-TAAVDPDESPEEGSAPGLSSESPTFP 180
           AKLLH C HGFHSDCIDMWFQSHSTCPLCRNPV TAA D  E  +E S  GLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180

Query: 181 TNVLIWGNQVQIASAGA--------------SSSAPAPESQPDAELAIDVQSDIQFPPSE 240
           TNVLIWGNQ Q+ SAGA              ++S+ A  + PDAEL IDVQ+D+QF P  
Sbjct: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240

Query: 241 LNEDGKLQIPTRLRSLKRLLSRQRRLNLCNSNSACVEMEQL 265
            NEDGKL + TRLRSLKRLLSRQRR+N CNSNSA  E EQL
Sbjct: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQL 281

[Close]

BLAST of Sed0013282 vs. TAIR 10
Match: AT1G72310.1 (RING/U-box superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 5.7e-43
Identity = 118/312 (37.82%), Postives = 155/312 (49.68%), Query Frame = 0


Query: 4   DFKLSQHS---GDSVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYIDDL----- 63
           D   S HS   GD  T  +   +I  AI V    ++FVL+L LYAKL W  ID L     
Sbjct: 2   DDNRSTHSSMFGDLSTEEVTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQ 61

Query: 64  ---------------TPLPPQTRPRRRFEFSAVQDPNSGKGLDAAVLRSLPVLIFHSDDF 123
                           P     R RRRF F   QD  S  GL +  L SLP++ F  D  
Sbjct: 62  QQQQEQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQDSC 121

Query: 124 KDALECAVCLSELVDGEKAKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAVD---- 183
           KD LEC++CLSELV G+KA+LL  C+H FH +CIDMWFQSHSTCP+CRN V         
Sbjct: 122 KDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSK 181

Query: 184 -----PDESPEEGSAPG-------LSSESPTFPTNVLIWGNQVQIASAGAS------SSA 243
                PD +   G+          LS+ SP FPTNVL+WG Q Q+++   +       +A
Sbjct: 182 RVEQVPDNAENAGTTNNNHDALSQLSTSSPEFPTNVLVWGRQDQVSTGNTNVGTQEDGAA 241

Query: 244 PAPESQPDAELAIDV-------------QSDIQFPPSELNEDGKLQIPTRLRSLKRLLSR 258
               SQ    + +D+              S ++F   E  E+ K  + TRLRSL+R LSR
Sbjct: 242 GNGASQSQEAVVLDISDSSSRNHNVSSSSSSMRFIVEE--EEAKSPMTTRLRSLRRFLSR 301

[Close]

BLAST of Sed0013282 vs. TAIR 10
Match: AT1G53820.1 (RING/U-box superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 3.2e-38
Identity = 107/286 (37.41%), Postives = 146/286 (51.05%), Query Frame = 0


Query: 21  GMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYI------------DDLTPLPPQTRPRRRF 80
           G V+  +I      ++F+LLL LYA+L W  +            D  + +  +   RRRF
Sbjct: 22  GKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRRRRF 81

Query: 81  EFSAVQ-DPNSGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEKAKLLHGCSH 140
            F+  Q DP    GLD+ +L+S+ V++F   DFKD LECAVCLS+LVDG+KA++L  C+H
Sbjct: 82  VFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPRCNH 141

Query: 141 GFHSDCIDMWFQSHSTCPLCRNPVTAAVDPDESPEEGSAPG------------------- 200
           GFH DCIDMWFQSHSTCPLCRN V +  D      EG                       
Sbjct: 142 GFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTHGGSEGLPQNQNFESGHSTNQHNPSQDQS 201

Query: 201 ----LSSESPTFPTNVLIWGNQVQIASAGASSSAPAP------------------ESQPD 251
                S+E  +FPTNVL+WG+Q Q+ SAG   +  +P                   SQ  
Sbjct: 202 FVHEFSTEPLSFPTNVLVWGDQNQVRSAGLVVTEESPSGNFAASYNDHQQESSSTRSQEV 261

[Close]

BLAST of Sed0013282 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 108.6 bits (270), Expect = 7.7e-24
Identity = 60/146 (41.10%), Postives = 84/146 (57.53%), Query Frame = 0


Query: 14  SVTINLPGMVIAAAIFVFLFVLVFVLLLQLYAKLIWAYI-DDLTPLPPQTRPRRRFEFSA 73
           S T  + G ++ +AI +  FV++ ++ L LYA+  W  +      L  ++R RR      
Sbjct: 21  SKTYAMSGKIMLSAIVILFFVVILMVFLHLYAR--WYLLRARRRHLRRRSRNRRATMVFF 80

Query: 74  VQDPN-------SGKGLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEKAKLLHGC 133
             DP+       + +GLD  V++SLPV  F  +  KD +ECAVCLSE  + E  ++L  C
Sbjct: 81  TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNC 140

Query: 134 SHGFHSDCIDMWFQSHSTCPLCRNPV 152
            H FH DCIDMWF SHSTCPLCR+ V
Sbjct: 141 QHTFHVDCIDMWFHSHSTCPLCRSLV 164

[Close]

BLAST of Sed0013282 vs. TAIR 10
Match: AT3G14320.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 99.0 bits (245), Expect = 6.1e-21
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 81  GLDAAVLRSLPVLIFHSDDFKDALECAVCLSELVDGEKAKLLHGCSHGFHSDCIDMWFQS 140
           G+   VLRS+P++ F++ DFK  LEC VCLSEL DG+KA++L  C H FH +CID W QS
Sbjct: 63  GIKPYVLRSIPIVDFNTKDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQS 122

Query: 141 HSTCPLCRNPV 152
           +STCP+CR  V
Sbjct: 123 NSTCPICRKRV 133

[Close]

BLAST of Sed0013282 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 97.1 bits (240), Expect = 2.3e-20
Identity = 57/164 (34.76%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 23  VIAAAIFVFLFVLVFVLLLQLYAKLIWA-YIDDLTPLPPQTRPRRR-------------- 82
           V+ AA+   L V++FVLLL  YA+  W+    D +      R RRR              
Sbjct: 29  VLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRRRRNRRRTVTTTRIIPS 88

Query: 83  ---------FEFSAVQDPNSGKGLDAAVLRSLPVLIF--HSDDFKDALECAVCLSELVDG 142
                        A       KGLD++V+ S+P+ ++  + ++  +  EC +CL     G
Sbjct: 89  LPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAG 148

Query: 143 EKAKLLHGCSHGFHSDCIDMWFQSHSTCPLCRNPVTAAVDPDES 161
           +  + L  C HGFH +CIDMW  SHSTCPLCR+PV AAV  +E+
Sbjct: 149 DFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

The following BLAST results are available for this feature:

BLAST of Sed0013282 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018248.1	9.3e-104	72.24	RING-H2 finger protein ATL3, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022955893.1	1.6e-103	72.95	RING-H2 finger protein ATL3-like [Cucurbita moschata]	[more]
XP_023527880.1	1.6e-103	72.24	RING-H2 finger protein ATL3-like [Cucurbita pepo subsp. pepo]	[more]
KAG6581797.1	6.0e-103	71.89	RING-H2 finger protein ATL3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022980687.1	7.8e-103	72.24	RING-H2 finger protein ATL60-like [Cucurbita maxima]	[more]

BLAST of Sed0013282 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF63	8.0e-42	37.82	RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1	[more]
P0C035	4.6e-37	37.41	RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1	[more]
Q8L9T5	1.1e-22	41.10	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9LRB7	2.1e-21	33.60	E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5....	[more]
Q9LUZ9	3.3e-19	34.76	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]

BLAST of Sed0013282 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GV98	7.7e-104	72.95	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111457742...	[more]
A0A6J1IRZ5	3.8e-103	72.24	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111479984 P...	[more]
A0A5A7UJD5	1.8e-100	71.17	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CCE4	1.8e-100	71.17	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499208 PE=3 ...	[more]
A0A0A0L962	7.4e-99	70.11	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G646670 PE...	[more]

BLAST of Sed0013282 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72310.1	5.7e-43	37.82	RING/U-box superfamily protein	[more]
AT1G53820.1	3.2e-38	37.41	RING/U-box superfamily protein	[more]
AT3G16720.1	7.7e-24	41.10	TOXICOS EN LEVADURA 2	[more]
AT3G14320.1	6.1e-21	57.75	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT5G58580.1	2.3e-20	34.76	TOXICOS EN LEVADURA 63	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 106..147 e-value: 1.5E-6 score: 37.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 105..148 e-value: 7.6E-13 score: 48.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 106..148 score: 12.282736
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 69..154 e-value: 1.3E-19 score: 71.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..173
None	No IPR available	PANTHER	PTHR45676:SF132	RING-H2 FINGER PROTEIN ATL3	coord: 5..262
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 105..148 e-value: 4.36469E-18 score: 73.4983
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 86..154
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 5..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013282.1	Sed0013282.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane