Sed0013263 (gene) Chayote v1

Overview


Name	Sed0013263
Type	gene
Organism	Sechium edule (Chayote v1)
Description	mediator of RNA polymerase II transcription subunit 19a-like
Location	LG09: 33861501 .. 33867768 (-)
RNA-Seq Expression	Sed0013263
Synteny	Sed0013263

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAAAGGGTTATTTGTACTCTTCTCTTCCCCCGATCTCAATTTCCCCTCCCTCTCTCCTCCGCCGTTCACGGCCGCCGGAGCTGCCCCTTCACTCCCCTCACACCCCCTTCTCCGCCCGATTCTCCGCTCAATTTCATCTCATTCTTCGATTCGATCCTCTCAAACCCTATTCCTCGATCGCGCTCTCGATTTCCTCCCATTTTCCGGCGCCTCTTCGCCGTCTTCTTCTTCCCTTCGCCGCCGAGGTTCGTTTTCCGTTCTCCCCCTTCTCTAATGGATTGCTTTCAAGTTGGTTATGGTTTTGGGTACTGCACTTTTCCCCTTCCGACCACGGGGTTTTCGGTTATGTGATTGATTGGTGTTTTTAGGGTTTTGTAGCTCGAGTTGAATTCGGTTGTTTTGAATTGTGTTCTTGTTTCTCGTGGAATTATGAAGGGGAGACGGTTTTGGGAGTTGGGGTTCTGATGAAATTGCGTTTCATTCTTGGGTTTGATGAGTTCAGATTGGTTACTTGTTTTAATTTGGATGAGAATGGTTTTAGGATTGGGAAGATTTCTGTTTTTGTCTTTCTGATTCAATTCTTGTTACAATTTTAATTAGTGGTTTTAGTAGTTAATGGTTCTTATTAGATTGATTGTTATGTACATGATTTGCTGCGAACTTACTAAATGTTCGAACTGTACTGAAGGTTTCTTTAGCTTAGAATTGTTCTTTCTCGTGGAATTTTGAAGGAGAGATGATTTTTGGAGTTGGTTTCATTCTTGGGTTTGAGTTCAGATGGGTTACTCTTACTCGTTGTAATTTGGATGAGAATCGTTTTAGGATTGCGCTAATTTCTGTTTTTTCTTCCACATTGAATTCTTTTTAAACTTTTAGGTCTAGTTTGATAACCATTTTGTTTTTAATTTTTGGTTTTTGAAATATTAGCATACAACAACTATCTTACCCTAAGTTTTTTCTTACTTGGATCTCTACGTCTTACCTATATTTTAAGAAACCAAATCAAAATTTGGGAACAAAAAAAAGTAGCTTCGAAACGCTTGTTTTTGAAATTTGGTTAGTGTTCACATACTTTTTTAAGAAAAGATAGATACATTGTTGGATAGATGAAGTACATTGTAAGAAATTTGAGTAAAAATAAGCTTAAATTTAAAGAACAAAAAATAAAAAACCAAATGGTTATCAAACGGGGCCTTAATTAGTAGTTTTCCTAGTTAATGGTTCTTAGATTGATTGTATGACTCTGGTTTTCTTGTTATAGGATTTTTCGTGTGTATGATTTGCTGCGAACTTACGGAATTTTGGAATCGGACTGAAGGGTTTCTTTAGCTTTGAATTTTCTAGCCAATTACTCTTTCAAGTATTTAAGTTTACTTACTCCTTTTGAATCATTGGGATAGATAGAGAAAGAAAATATACGTTTGTTGTGTTGGAATTGTAGTTTCACAGCTCTTTGGGTTCTTATGATTGCAGCGATAATAATGTTACATTGTTCCAAGGAAGAGTGATACATGGAATCTGAAGACAAGAAGTTTGGCCAAGGTAAATGACGATTTAGTCAATTTAGTCCCCTGCACTGACATGTTTAAAGAGTATGACATTGCTTGGTTTATACATTGAGGCTTTTATGATACTTTAGGATTCTGTTGTAGGCTTTAGTAATGAAAGTAACCCACATCTTACTTAGGTTTTCCTTTTGTTGGGAACTCAAAGTGTCTTTAATTTTGCACTCCAATTATTGATAAAATATTGAGGTTTTGTATCGAAGGAGATTGATCTTCTCATTCTTCCCTTATTGGCAAATATTCTACAGGATAGAAGTGAATTAAGTTCTGTATCCCACTGCAAGCTAAAGTCTAAGCAGTTTTCCCCTAAATTACATATAAGATCTATATCGTGGCATTAAATTTGCTCAATTTGCAGTTAATGTGTGAACTGTGAAGTGAAAGAATTTGTCAAGGTTTTCTATTGTCTTCAAAGCAATATGATCTTTCTGACACTTTTGGTCAGCATTTTGCAATGGTTCAATGTTACACTTTATTTTTATATTATTATTATTGTAGCTTCTTTTGTTTTTCTGTCTTGTACGTTTTAAATCTTTATTATCCTCTAATTGATTTTTTTCAAATTCTGTTAGCATTTTCTTTTGTCAATATGTTTCTTTTTTGGATAAGACTTTTTTCAATAAGTTTCTTTGTTGCCTTATTTCAATGTAAATAGAAAGGACCATGGAAGTTCAGGTGTTCCATTCCATCTTGTTCATTTTCTCTGTGCCGATTATCTTCTATCACCTGAAATTTTATTCATACCTTTAGGACCTAGGGAATTGACTGGTGCTGTGGATCTTATAAGTCACTTCAAGCTGTTTCCCCATCATGAGTTCTTCTGCAAGAAGTCACTTCCATTGTCAATTTCGGACACACATTATCTTCATAACGTGGTTGGAGACACAGAAATTAGAAAAGGGGAAGGAATGCAGTTGAATCAACTCCTACAGAATCCGTCTTACCCTAGAGAGACTAATGCCCGCATACAGCCATTTGACCAAGACATTCTCATAGAAGCCTTCCAACTGCGGGAAACTGGTCCTGTTGAGCTGCCTTCTGTAAGAAATTTAGTATTAAAATTGTTAAAACTGTGACTTCTTTCAGCTTTCTTCCATCAGATGGAACTTTGATGTTACCAAGGCAATGGGTCTGGTTATCAGCATTTCTCATCCCGATTCTTTTCTCTGCAAGTCATGGTCCATTTCTTTTTTTTGTGTTAGGCCGAGAAGGGCGTTCCTACTATTCCAGGGAAGTTGAAAAGTGAGTCCAAAGATAAAGACAGAAAGCATAAGAAGCACAAAGATAGGGATAAGGATAAGGATAGAGAGCATAAGAAGCACAAGCATCGACATAAAGACCGAAGCAAAGATAAAGACAAGGATAAGAAGAAAGAAAAAAGTGCCCATCAAGAATCCGGTGCTGAACATTCAAAGAAGCATCACGAAAAGGTTAGAAAACCTTGACTCTTATCCCAATTCCTAGTTTGTTGTTACAAGGTTATCACTTCATGAAGCTTAACCCTTCGATGTGTACCATATTTTATCTACTAAAAATTAAGGATTAAGTCATCTTTTTGTGTTTTACTACTAAACTAATATACAATTATTGTGCGTGTAACCCAAATGTGCTGTTTCTTAGTTTTTAACTTCATTTAATTTTCAGAAAAGGAAGCATGATGGAGAAGACGATATTAATGACATTCATAGGCACAAAAAAAGTAAGGTAATACGAAGTCAAAAAAAAAAAGCTCTAAATTGCTTTCTTACTGAAAAGAACAATCATCAGGGTCTACCTCATCTTTGTAATCCATGTTATGATTTTTCAATCGATCATTTTCCTACTAAAAGTTTTCTGCATTTAACTTCTGCAGCATAAAACCGCAAAAATTGAAGAAATGGGAGTGATAAAGGTAGCGGGCTGACATTGTGGAATAATCTAGGTCATTTATTTCCTCGTATGGTTGTAGAAAGATTGGTGGAATTTTCACTTAATGTTGTCAAAAAGTGCTTGAGGTATATTTATATCTTTCAAGTATATTCTATATTCAATTGTTCTTCATATGATTACATTTCTTTTCCCTTGATGTTTTTTTTCTTTCAAACAAAATTTTCACTGATATTTGTAAAGTTGCGTCATAAAACTGTTGCTCCCATATGAGCATGCAAAAGAGCATTGACATCCAACCATCAAATAACTCAAAATGGTTAAATAGAAACTAAAACTTAAAGAGTCTACATCTGAACTATAGTTGGCTGCATTCAGAGTAACACTTTAAAATGTGCTAGACCAGGTACCAAGGAGGCTTGGAACTTAGAAGGATTAGGCCATTACCAATTCCCTCAGGAGGATTAGGCTCCATAGAATTCCCATAGAAGGATTAGGTTATTTGCAAGATATGGGGATGTATTTAGTTTCAATACCAATTCCCTCGGCCTCGGTTAGTTTGTAGAAAAATTCTTCTTACATTAGGTTGCATGGGGCTTTTTCTTTGGTGGAGGATACTCTAGTGGAGCTTTTAGAGGAACTTTTGGTTGTAATTTCAATTTGAGATGTTGTTGGAAAAATTTAGCACATCAGTGTGTCTGGTTGTTTCAAGCAGAAAAAAGGTCCCTAGGGCTAACAACGACACTATATTCTTGGGATTTGAGATGCTCCGTGAGATAAAGGAAGGACAGTTTTGCATGAACGGATGATAAAGAGAAGGTGATAAAGATGAGGATGTATTTAGTTTCAATACCCTAACTGAAGATCTGTAATGGGATCGAGAAGGAAAAGAGAGAGTGAGAGAGATGAGGATGATGGAAGAGGCGACCAAGCTATTTCAGAGATGAAAAGGTTTTTTCAAGAAATCAATTTTTCTTTTAAATCTTTTGAATGACCTTGATTTTCCCCATGTTTGATATTTGTGAAATTTGGAGTGTTTGGTTCAATTTACGTGTACTTTAACTACCCTCGCAACACAGCCGTTTCAACTCAACTTTGATTTTATATAGACACACATGAAAAATTGGAGTCTAGACTTGCTTAGTTAGCTAATGGGTTGAAATAGGTTTATGTATTTACAGGCATCCTTTGATTCTGAATTTAGAAATGTAGTTCATTTTCATTTGGGTGACTTGGTAGGCTTTGGGTGATTGCCTTTCATCATTATTTTCTTCATTGGGTTGAGTTGTGATGGTTTTAGGATTGGTCTTCTCTTATGATGAAATTTGAAACAAAAATTTAAAGAATAGGAGAAAATATTAAGAATGCGTATTAATTGAATACAAAACTGCCCCCAAGGGATGACACAGTGGTTGAAGACTTGGGCATTGAAGGTATGCTCCCTTCAAGGTCTCAGGTTCGAGACTCACCCATGACATTACTCTTTCGATGTTTCCTAGTGCCTAGCCTAGGGACGGGCGTGGTTACTTTTGTTTAAAAAAATATGAATACAAAACCAAACTCCAGAGTTAGCCTTTTTAATTCATTTCATACATCTTTCAATTTTCATCCATGGTCAAGTATGATTGCATTTTAATTGATACATGTGAGTCTTTTTTGTGTTCTGCAATTCCATGAAGTGTCTACCGATTGCTGCCAACTCGTGTATGCTTATGATTCAGGAGGTCATGAGTTCAAATTTCCCTTCCCCAATTGCTACTAAACTAAAAAAAATGAAAAAAGGTGTTATTTTTAGTCATTCTTGGCAAAGTTTTTCTCTGTTCAAGCTTTCTTTTGAAGCAGTTCTGTTTTTTGTGTTCCTTTCTTTTTGTTATATGTAACAGGTTTGATTTCCTTGATGCTTTTTGTGATTGCCTGAAGCATGCTAAAACTAATTGAGTATTCTTGTCCATGAAAAATTTGGAGGTCATAATTCATATAACTCAAGAAATCAAGTACAGTCAATTTTCTTTCTTTCTTTTTTTTTTTTTTTTGACTCGGGAACTTAGAGTTTTGCTCCTCCAAATTTGGGGCACCTCTAATCCATTCCTAGACTGTGGCATCGGAATACATCGTGGGACATGAAGTGAAATTGATGTTTGTCTGGAAAATTAATCCCTATAGCCTCCTCGAACCTAGGACCTTAAGGGGAGTACAGTACACCTCCAAGGCCCAGACGCTCAACCACTGCTCTTCCCTTAGGAGGGGACGAGTACCGTCAATTTTCTTGGCCTTTATTTCAAGGGGAAACCTAATTCCACCCCATTTGGGACATGCAGAAACTGCCCTTTTGCTTTTCTATTATCTCCATAATTCCATTTATTATTATGTGTGGGCTTAAAGATAGTAACCTAGCTGAGTCTTTGATCATTTTCTTATGCTCTTGGCTCCTCATATTTTTGGCTTTTCCTGGACCCTTTTGAGTTTATGATAGTGTTTTGTCTTTCTTCATGCAGAGTAGCTTCTGATGAGGGTGAATTTACCAGTATTAGGGTTTGGAAAGCAAATGTAAAAAAAATGGTGGAATTGAACTTTTGTATCATAATAAACTCTGGTCTGATATATGAATTTGAGCAATTTGCAGGACTGGTTGTTTTCAGCTTTCCTCATGTAACATCATATTCATTTTTCGGGTTCTAGACCTATTTCGAGTTATAGTTTGATGAAGTAGCATTCTTCGTCTTCGGTATTTCGAACGAAGGTAAAAGGCTAGAAATTCTCTCTAGATCTCCTCATTTTCTCTCTCCCTCCACCCCGCCTCGTCGTATTTCTTCAACTATATTCTTTTGACCTAAC

mRNA sequence

GGCAAAGGGTTATTTGTACTCTTCTCTTCCCCCGATCTCAATTTCCCCTCCCTCTCTCCTCCGCCGTTCACGGCCGCCGGAGCTGCCCCTTCACTCCCCTCACACCCCCTTCTCCGCCCGATTCTCCGCTCAATTTCATCTCATTCTTCGATTCGATCCTCTCAAACCCTATTCCTCGATCGCGCTCTCGATTTCCTCCCATTTTCCGGCGCCTCTTCGCCGTCTTCTTCTTCCCTTCGCCGCCGAGCGATAATAATGTTACATTGTTCCAAGGAAGAGTGATACATGGAATCTGAAGACAAGAAGTTTGGCCAAGGACCTAGGGAATTGACTGGTGCTGTGGATCTTATAAGTCACTTCAAGCTGTTTCCCCATCATGAGTTCTTCTGCAAGAAGTCACTTCCATTGTCAATTTCGGACACACATTATCTTCATAACGTGGTTGGAGACACAGAAATTAGAAAAGGGGAAGGAATGCAGTTGAATCAACTCCTACAGAATCCGTCTTACCCTAGAGAGACTAATGCCCGCATACAGCCATTTGACCAAGACATTCTCATAGAAGCCTTCCAACTGCGGGAAACTGGTCCTGTTGAGCTGCCTTCTGCCGAGAAGGGCGTTCCTACTATTCCAGGGAAGTTGAAAAGTGAGTCCAAAGATAAAGACAGAAAGCATAAGAAGCACAAAGATAGGGATAAGGATAAGGATAGAGAGCATAAGAAGCACAAGCATCGACATAAAGACCGAAGCAAAGATAAAGACAAGGATAAGAAGAAAGAAAAAAGTGCCCATCAAGAATCCGGTGCTGAACATTCAAAGAAGCATCACGAAAAGAAAAGGAAGCATGATGGAGAAGACGATATTAATGACATTCATAGGCACAAAAAAAGTAAGCATAAAACCGCAAAAATTGAAGAAATGGGAGTGATAAAGGTAGCGGGCTGACATTGTGGAATAATCTAGGTCATTTATTTCCTCGTATGGTTGTAGAAAGATTGGTGGAATTTTCACTTAATGTTGTCAAAAAGTGCTTGAGAGTAGCTTCTGATGAGGGTGAATTTACCAGTATTAGGGTTTGGAAAGCAAATGTAAAAAAAATGGTGGAATTGAACTTTTGTATCATAATAAACTCTGGTCTGATATATGAATTTGAGCAATTTGCAGGACTGGTTGTTTTCAGCTTTCCTCATGTAACATCATATTCATTTTTCGGGTTCTAGACCTATTTCGAGTTATAGTTTGATGAAGTAGCATTCTTCGTCTTCGGTATTTCGAACGAAGGTAAAAGGCTAGAAATTCTCTCTAGATCTCCTCATTTTCTCTCTCCCTCCACCCCGCCTCGTCGTATTTCTTCAACTATATTCTTTTGACCTAAC

Coding sequence (CDS)

ATGGAATCTGAAGACAAGAAGTTTGGCCAAGGACCTAGGGAATTGACTGGTGCTGTGGATCTTATAAGTCACTTCAAGCTGTTTCCCCATCATGAGTTCTTCTGCAAGAAGTCACTTCCATTGTCAATTTCGGACACACATTATCTTCATAACGTGGTTGGAGACACAGAAATTAGAAAAGGGGAAGGAATGCAGTTGAATCAACTCCTACAGAATCCGTCTTACCCTAGAGAGACTAATGCCCGCATACAGCCATTTGACCAAGACATTCTCATAGAAGCCTTCCAACTGCGGGAAACTGGTCCTGTTGAGCTGCCTTCTGCCGAGAAGGGCGTTCCTACTATTCCAGGGAAGTTGAAAAGTGAGTCCAAAGATAAAGACAGAAAGCATAAGAAGCACAAAGATAGGGATAAGGATAAGGATAGAGAGCATAAGAAGCACAAGCATCGACATAAAGACCGAAGCAAAGATAAAGACAAGGATAAGAAGAAAGAAAAAAGTGCCCATCAAGAATCCGGTGCTGAACATTCAAAGAAGCATCACGAAAAGAAAAGGAAGCATGATGGAGAAGACGATATTAATGACATTCATAGGCACAAAAAAAGTAAGCATAAAACCGCAAAAATTGAAGAAATGGGAGTGATAAAGGTAGCGGGCTGA

Protein sequence

MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKHHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKVAG

Homology

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BLAST of Sed0013263 vs. NCBI nr
Match: XP_022959852.1 (mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita moschata] >KAG6593062.1 Mediator of RNA polymerase II transcription subunit 19a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 401.7 bits (1031), Expect = 3.9e-108
Identity = 209/219 (95.43%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESEDKKFGQGPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLK 120
           GEGMQLNQL+QNPSYPRETNARIQPFDQDILIEAFQLRETGPVELP AEKGVPTIPGK K
Sbjct: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKH 180
           SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKK+KSAHQ+SGA+HSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKVAG 220
           HEKKRKHDGEDDINDIHRHKK+KHK AKIEEMGVIKVAG
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIKVAG 219

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BLAST of Sed0013263 vs. NCBI nr
Match: KAG7025472.1 (Mediator of RNA polymerase II transcription subunit 19a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 400.6 bits (1028), Expect = 8.7e-108
Identity = 208/219 (94.98%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESEDKKFGQGPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLK 120
           GEGMQLNQL+QNPSYPRETNARIQPFD+DILIEAFQLRETGPVELP AEKGVPTIPGK K
Sbjct: 61  GEGMQLNQLIQNPSYPRETNARIQPFDEDILIEAFQLRETGPVELPPAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKH 180
           SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKK+KSAHQ+SGA+HSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKVAG 220
           HEKKRKHDGEDDINDIHRHKK+KHK AKIEEMGVIKVAG
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIKVAG 219

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BLAST of Sed0013263 vs. NCBI nr
Match: XP_023004820.1 (mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita maxima])

HSP 1 Score: 397.9 bits (1021), Expect = 5.7e-107
Identity = 206/219 (94.06%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESEDKKFGQGPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLK 120
           GEGMQLNQL+Q+PSYPRETNARIQPFDQDILIEAFQLRETGPVELP AEKGVPT+PGK K
Sbjct: 61  GEGMQLNQLIQSPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTVPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKH 180
            ESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKK+KSAHQ+SGA+HSKKH
Sbjct: 121 GESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKVAG 220
           HEKKRKHDGEDDINDIHRHKK+KHK AKIEEMGVIKVAG
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIKVAG 219

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BLAST of Sed0013263 vs. NCBI nr
Match: XP_031744806.1 (mediator of RNA polymerase II transcription subunit 19a [Cucumis sativus] >XP_031744807.1 mediator of RNA polymerase II transcription subunit 19a [Cucumis sativus])

HSP 1 Score: 394.8 bits (1013), Expect = 4.8e-106
Identity = 205/219 (93.61%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESEDKKFG+GPRELTGAVDLISH+KL PHH+FFCKKSLPLSISDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLK 120
           GEGMQLNQL+QN SYPRETNARIQPFDQDILIEAFQLRETGPV+LPSAEKGVPTIPGK K
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKH 180
           SESKDKDRKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKKEKS HQ+SGA+HSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKVAG 220
           HEKKRKHDGEDDINDIHRHKKSKHK +KIEEMGVIKVAG
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKSKHKASKIEEMGVIKVAG 219

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BLAST of Sed0013263 vs. NCBI nr
Match: XP_023513830.1 (mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.4 bits (1012), Expect = 6.3e-106
Identity = 205/216 (94.91%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESEDKKFGQGPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLK 120
           GEGMQLNQL+QNPSYPRETNARIQPFDQDILIEAFQLRETGPVELP AEKGVPTIPGK K
Sbjct: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKH 180
           SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKK+KS HQ+SGA+HSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSTHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           HEKKRKHDGEDDINDIHRHKK+KHK AKIEEMGVIK
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIK 216

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BLAST of Sed0013263 vs. ExPASy Swiss-Prot
Match: Q9FMP0 (Mediator of RNA polymerase II transcription subunit 19a OS=Arabidopsis thaliana OX=3702 GN=MED19A PE=1 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 7.2e-81
Identity = 164/223 (73.54%), Postives = 191/223 (85.65%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           ME E  KFG GPREL GA DLIS FKL  HHEFFCKKSLP+S+SD+HYLHNVVGDTEIRK
Sbjct: 1   MEPERLKFG-GPRELCGAADLISQFKLVQHHEFFCKKSLPVSLSDSHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLK 120
           GEGMQL+QL+++ S  RETN RIQPFD D L E+FQL +  PVELP AEKG PTIP K K
Sbjct: 61  GEGMQLDQLIESISQSRETNIRIQPFDIDELQESFQLNDMTPVELPPAEKGAPTIPSKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDK----KKEKSAHQESGAEH 180
           SESKD+DRKHKKHKDRDKDKDREHKKHKH+HKDRSKDKDKDK    KK+K+ H +SG +H
Sbjct: 121 SESKDRDRKHKKHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSG-DH 180

Query: 181 SKKHHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKVAG 220
           SKKHH+KKRKHDG++D+ND+ RHKK+KHK++K++E+G I+VAG
Sbjct: 181 SKKHHDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEVGAIRVAG 221

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BLAST of Sed0013263 vs. ExPASy Swiss-Prot
Match: Q6NQD9 (Probable mediator of RNA polymerase II transcription subunit 19b OS=Arabidopsis thaliana OX=3702 GN=MED19B PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-66
Identity = 145/216 (67.13%), Postives = 175/216 (81.02%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESE  KFG GPREL GA+DLI+ +KL PHHEFFCK+SLP S+SD HYLHN+VGDTEIRK
Sbjct: 1   MESESVKFG-GPRELGGALDLITQYKLLPHHEFFCKRSLPESLSDAHYLHNLVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSY-PRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKL 120
           GEGMQL+QL+ N S   R+TNARIQPF  D L EAF+L +T PVELP AEKG PT   K 
Sbjct: 61  GEGMQLDQLIPNASLSSRDTNARIQPFVLDELKEAFELNDTAPVELPPAEKGAPTTVSKS 120

Query: 121 KSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKK 180
           KSESKDKDRKH+KHKD+ K+KDREHKKHKH+HKDR KDKDKDK ++K   ++SG      
Sbjct: 121 KSESKDKDRKHRKHKDK-KEKDREHKKHKHKHKDRIKDKDKDKDRDKK-KEKSG------ 180

Query: 181 HHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVI 216
           HH+KKRK++G +D +D+ RHKKSKHK++K++EMG +
Sbjct: 181 HHDKKRKNNGTEDADDVQRHKKSKHKSSKLDEMGAM 207

[Close]

BLAST of Sed0013263 vs. ExPASy TrEMBL
Match: A0A6J1H5Q1 (mediator of RNA polymerase II transcription subunit 19a-like OS=Cucurbita moschata OX=3662 GN=LOC111460791 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.9e-108
Identity = 209/219 (95.43%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESEDKKFGQGPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLK 120
           GEGMQLNQL+QNPSYPRETNARIQPFDQDILIEAFQLRETGPVELP AEKGVPTIPGK K
Sbjct: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKH 180
           SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKK+KSAHQ+SGA+HSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKVAG 220
           HEKKRKHDGEDDINDIHRHKK+KHK AKIEEMGVIKVAG
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIKVAG 219

[Close]

BLAST of Sed0013263 vs. ExPASy TrEMBL
Match: A0A6J1KVN1 (mediator of RNA polymerase II transcription subunit 19a-like OS=Cucurbita maxima OX=3661 GN=LOC111498006 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.7e-107
Identity = 206/219 (94.06%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESEDKKFGQGPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLK 120
           GEGMQLNQL+Q+PSYPRETNARIQPFDQDILIEAFQLRETGPVELP AEKGVPT+PGK K
Sbjct: 61  GEGMQLNQLIQSPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTVPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKH 180
            ESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKK+KSAHQ+SGA+HSKKH
Sbjct: 121 GESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKVAG 220
           HEKKRKHDGEDDINDIHRHKK+KHK AKIEEMGVIKVAG
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIKVAG 219

[Close]

BLAST of Sed0013263 vs. ExPASy TrEMBL
Match: A0A1S4DWJ4 (mediator of RNA polymerase II transcription subunit 19a-like OS=Cucumis melo OX=3656 GN=LOC103489709 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.2e-106
Identity = 204/219 (93.15%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESEDKKFG+GPRELTGAVDLISH+KL PHH+FFCKKSLPLSISDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLK 120
           GEGMQLNQL+QN SYPRETNARIQPFDQDILIEAFQLRETGPV+LPSAEKGVPTIPGK K
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKH 180
           SESKDKDRKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKK+KS HQ+SGA+HSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKVAG 220
           HEKKRKHDGEDDINDIHRHKKSKHK +KIEEMGVIKVAG
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKSKHKASKIEEMGVIKVAG 219

[Close]

BLAST of Sed0013263 vs. ExPASy TrEMBL
Match: A0A6J1CP39 (mediator of RNA polymerase II transcription subunit 19a-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013422 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.8e-106
Identity = 204/219 (93.15%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESEDKKFG+GPRELTGAVDLISH+KL PHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLK 120
           GEGMQLNQL+QN SYPRETNARIQPFDQDILIEAFQLRETGPV+LP AEKGVPTIPGK K
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPPAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKH 180
           SESKDK+RKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKK++KSAH ESGA+HSKKH
Sbjct: 121 SESKDKERKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKRDKSAHHESGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKVAG 220
           HEKKRKHDGEDDINDIHRHKKSKHKT+KIEEMGVIKVAG
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKSKHKTSKIEEMGVIKVAG 219

[Close]

BLAST of Sed0013263 vs. ExPASy TrEMBL
Match: A0A0A0K716 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374560 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104
Identity = 202/216 (93.52%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESEDKKFG+GPRELTGAVDLISH+KL PHH+FFCKKSLPLSISDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLK 120
           GEGMQLNQL+QN SYPRETNARIQPFDQDILIEAFQLRETGPV+LPSAEKGVPTIPGK K
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKKH 180
           SESKDKDRKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKKEKS HQ+SGA+HSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           HEKKRKHDGEDDINDIHRHKKSKHK +KIEEMGVIK
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKSKHKASKIEEMGVIK 216

[Close]

BLAST of Sed0013263 vs. TAIR 10
Match: AT5G12230.1 (MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 301.6 bits (771), Expect = 5.1e-82
Identity = 164/223 (73.54%), Postives = 191/223 (85.65%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           ME E  KFG GPREL GA DLIS FKL  HHEFFCKKSLP+S+SD+HYLHNVVGDTEIRK
Sbjct: 1   MEPERLKFG-GPRELCGAADLISQFKLVQHHEFFCKKSLPVSLSDSHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKLK 120
           GEGMQL+QL+++ S  RETN RIQPFD D L E+FQL +  PVELP AEKG PTIP K K
Sbjct: 61  GEGMQLDQLIESISQSRETNIRIQPFDIDELQESFQLNDMTPVELPPAEKGAPTIPSKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDK----KKEKSAHQESGAEH 180
           SESKD+DRKHKKHKDRDKDKDREHKKHKH+HKDRSKDKDKDK    KK+K+ H +SG +H
Sbjct: 121 SESKDRDRKHKKHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSG-DH 180

Query: 181 SKKHHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKVAG 220
           SKKHH+KKRKHDG++D+ND+ RHKK+KHK++K++E+G I+VAG
Sbjct: 181 SKKHHDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEVGAIRVAG 221

[Close]

BLAST of Sed0013263 vs. TAIR 10
Match: AT5G19480.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 254.2 bits (648), Expect = 9.4e-68
Identity = 145/216 (67.13%), Postives = 175/216 (81.02%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESE  KFG GPREL GA+DLI+ +KL PHHEFFCK+SLP S+SD HYLHN+VGDTEIRK
Sbjct: 1   MESESVKFG-GPRELGGALDLITQYKLLPHHEFFCKRSLPESLSDAHYLHNLVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSY-PRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKL 120
           GEGMQL+QL+ N S   R+TNARIQPF  D L EAF+L +T PVELP AEKG PT   K 
Sbjct: 61  GEGMQLDQLIPNASLSSRDTNARIQPFVLDELKEAFELNDTAPVELPPAEKGAPTTVSKS 120

Query: 121 KSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKK 180
           KSESKDKDRKH+KHKD+ K+KDREHKKHKH+HKDR KDKDKDK ++K   ++SG      
Sbjct: 121 KSESKDKDRKHRKHKDK-KEKDREHKKHKHKHKDRIKDKDKDKDRDKK-KEKSG------ 180

Query: 181 HHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVI 216
           HH+KKRK++G +D +D+ RHKKSKHK++K++EMG +
Sbjct: 181 HHDKKRKNNGTEDADDVQRHKKSKHKSSKLDEMGAM 207

[Close]

BLAST of Sed0013263 vs. TAIR 10
Match: AT5G19480.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12230.1); Has 15754 Blast hits to 7644 proteins in 441 species: Archae - 6; Bacteria - 451; Metazoa - 7628; Fungi - 1448; Plants - 1196; Viruses - 38; Other Eukaryotes - 4987 (source: NCBI BLink). )

HSP 1 Score: 254.2 bits (648), Expect = 9.4e-68
Identity = 145/216 (67.13%), Postives = 175/216 (81.02%), Query Frame = 0


Query: 1   MESEDKKFGQGPRELTGAVDLISHFKLFPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
           MESE  KFG GPREL GA+DLI+ +KL PHHEFFCK+SLP S+SD HYLHN+VGDTEIRK
Sbjct: 1   MESESVKFG-GPRELGGALDLITQYKLLPHHEFFCKRSLPESLSDAHYLHNLVGDTEIRK 60

Query: 61  GEGMQLNQLLQNPSY-PRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKL 120
           GEGMQL+QL+ N S   R+TNARIQPF  D L EAF+L +T PVELP AEKG PT   K 
Sbjct: 61  GEGMQLDQLIPNASLSSRDTNARIQPFVLDELKEAFELNDTAPVELPPAEKGAPTTVSKS 120

Query: 121 KSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQESGAEHSKK 180
           KSESKDKDRKH+KHKD+ K+KDREHKKHKH+HKDR KDKDKDK ++K   ++SG      
Sbjct: 121 KSESKDKDRKHRKHKDK-KEKDREHKKHKHKHKDRIKDKDKDKDRDKK-KEKSG------ 180

Query: 181 HHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVI 216
           HH+KKRK++G +D +D+ RHKKSKHK++K++EMG +
Sbjct: 181 HHDKKRKNNGTEDADDVQRHKKSKHKSSKLDEMGAM 207

The following BLAST results are available for this feature:

BLAST of Sed0013263 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959852.1	3.9e-108	95.43	mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita moschata...	[more]
KAG7025472.1	8.7e-108	94.98	Mediator of RNA polymerase II transcription subunit 19a, partial [Cucurbita argy...	[more]
XP_023004820.1	5.7e-107	94.06	mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita maxima]	[more]
XP_031744806.1	4.8e-106	93.61	mediator of RNA polymerase II transcription subunit 19a [Cucumis sativus] >XP_03...	[more]
XP_023513830.1	6.3e-106	94.91	mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita pepo sub...	[more]

BLAST of Sed0013263 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMP0	7.2e-81	73.54	Mediator of RNA polymerase II transcription subunit 19a OS=Arabidopsis thaliana ...	[more]
Q6NQD9	1.3e-66	67.13	Probable mediator of RNA polymerase II transcription subunit 19b OS=Arabidopsis ...	[more]

BLAST of Sed0013263 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5Q1	1.9e-108	95.43	mediator of RNA polymerase II transcription subunit 19a-like OS=Cucurbita moscha...	[more]
A0A6J1KVN1	2.7e-107	94.06	mediator of RNA polymerase II transcription subunit 19a-like OS=Cucurbita maxima...	[more]
A0A1S4DWJ4	5.2e-106	93.15	mediator of RNA polymerase II transcription subunit 19a-like OS=Cucumis melo OX=...	[more]
A0A6J1CP39	8.8e-106	93.15	mediator of RNA polymerase II transcription subunit 19a-like isoform X2 OS=Momor...	[more]
A0A0A0K716	1.3e-104	93.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374560 PE=4 SV=1	[more]

BLAST of Sed0013263 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12230.1	5.1e-82	73.54	MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19...	[more]
AT5G19480.1	9.4e-68	67.13	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G19480.2	9.4e-68	67.13	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019403	Mediator complex, subunit Med19, metazoa	PFAM	PF10278	Med19	coord: 12..172 e-value: 9.9E-6 score: 25.6
IPR019403	Mediator complex, subunit Med19, metazoa	PANTHER	PTHR22536	LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN	coord: 1..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..157
None	No IPR available	PANTHER	PTHR22536:SF4	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 19A-LIKE ISOFORM X1	coord: 1..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013263.1	Sed0013263.1	mRNA
Sed0013263.2	Sed0013263.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0019008	molybdopterin synthase complex
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0061798	GTP 3',8'-cyclase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003712	transcription coregulator activity