Homology
BLAST of Sed0013243 vs. NCBI nr
Match:
XP_023519257.1 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1456.8 bits (3770), Expect = 0.0e+00
Identity = 731/893 (81.86%), Postives = 792/893 (88.69%), Query Frame = 0
Query: 1 MNFNAVQTFVNKTLFSPLRLISSVGTVHNVSNFSLITRIETYPLFDPIQLLNDYVKSKKC 60
MNF + TFVNKTL S RLISSV TV N S+FS T+IETYPLFDP QLL+DYVKS+KC
Sbjct: 1 MNFTGIPTFVNKTLLSQRRLISSVATVDNASSFS-FTKIETYPLFDPSQLLSDYVKSRKC 60
Query: 61 SLRNTKVLHANLLGATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIII 120
SLRNTKVLHA LL ATLLHSNI+VSNSLLDCYSKSNS+D+ALKLF TMLHPNVISWNI+I
Sbjct: 61 SLRNTKVLHAKLLRATLLHSNIYVSNSLLDCYSKSNSLDHALKLFDTMLHPNVISWNILI 120
Query: 121 SCFNCNFLFLDSWRTFCRMHFLGFEPNEITYGSVLSACAAIQAPMLGKQVYSLAIRNGFF 180
S FN NF++LDSWRTFCRMHFLGFEP+EITYGSVLSACAAIQAPM GKQVYSLA+RNGFF
Sbjct: 121 SSFNHNFMYLDSWRTFCRMHFLGFEPSEITYGSVLSACAAIQAPMFGKQVYSLAVRNGFF 180
Query: 181 VNGFVRAGMINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTM 240
VNG+VRAGMI+LFA+DSSFLDALRVF DVDCENVVCWNAIVSAAVRN EN MALDL+NTM
Sbjct: 181 VNGYVRAGMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNGENFMALDLYNTM 240
Query: 241 CSGFLEPNNFTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGAMD 300
C GFLEPN+FTFSSVLTACAALE EFGKRVQG+VIKCGGEDVFVETALIDLY+KCG MD
Sbjct: 241 CHGFLEPNSFTFSSVLTACAALEHPEFGKRVQGKVIKCGGEDVFVETALIDLYSKCGEMD 300
Query: 301 EAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACG 360
EAVK FLRM +RNVVSWTAIISGFVQKND +MA KFF+DMRKLGEEINSYTVTSVLTAC
Sbjct: 301 EAVKIFLRMPIRNVVSWTAIISGFVQKNDYLMALKFFKDMRKLGEEINSYTVTSVLTACA 360
Query: 361 NPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWT 420
NPAMTKEAIQLHSWIL+AGFSSHAVV AALINMY+KIGAID SM VF E+D +RNL+SWT
Sbjct: 361 NPAMTKEAIQLHSWILRAGFSSHAVVGAALINMYSKIGAIDLSMTVFGEMDNKRNLSSWT 420
Query: 421 AMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSVIDCITFGRQIHCYSLKIGLI 480
AMITSF+QNND E+A ELFQKML ES+ PDTFCTSSVLSV DCITFGRQIHC++ K GLI
Sbjct: 421 AMITSFAQNNDKEKASELFQKMLRESMGPDTFCTSSVLSVTDCITFGRQIHCFTHKTGLI 480
Query: 481 FDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA----------------EM 540
FD+SVGSALFTMYSKCGYLEEAF +F NMPKKDN+SWASM++ EM
Sbjct: 481 FDISVGSALFTMYSKCGYLEEAFHVFKNMPKKDNISWASMMSCFSEHGYAKEGIQLFREM 540
Query: 541 LFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNL 600
LFE+YVPD M S VL AC +LHSIQIG+EIH YS+R GL KD+A+GGSLVTMYSKCGNL
Sbjct: 541 LFEEYVPDYMILSTVLNACSVLHSIQIGREIHCYSVRLGLDKDVAIGGSLVTMYSKCGNL 600
Query: 601 EMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSILGAI 660
EMAR+VFETLP+KD+I SSLVSGYAQ KCIKE +LLF+DLL AGLAIDPFSISSILGAI
Sbjct: 601 EMARRVFETLPEKDNIACSSLVSGYAQHKCIKETILLFQDLLEAGLAIDPFSISSILGAI 660
Query: 661 ALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLIGWT 720
ALLN+PG+GTQLHA+I KV LEKDVSVGSSLVM+YSKCGSIEDCCKAFE IGKPDLIGWT
Sbjct: 661 ALLNRPGIGTQLHAIITKVGLEKDVSVGSSLVMVYSKCGSIEDCCKAFEQIGKPDLIGWT 720
Query: 721 TMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLNSMVKD 780
MIVSYAQHGKG EALCVYELMKK+GIKPD +TFVGVLSACSHNGLVDEAYFHLNSMVKD
Sbjct: 721 AMIVSYAQHGKGAEALCVYELMKKEGIKPDPVTFVGVLSACSHNGLVDEAYFHLNSMVKD 780
Query: 781 YGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWD---ASC----------- 840
YGIQPG+RHYACMVDLLGR G+LK AEELINNMPIEPDAL+W A+C
Sbjct: 781 YGIQPGHRHYACMVDLLGRCGQLKRAEELINNMPIEPDALIWGTLLAACKVHGDIELGKL 840
Query: 841 -CLKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWSVL 863
KVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGA VTK+PGWS+L
Sbjct: 841 AARKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGAGVTKEPGWSLL 892
BLAST of Sed0013243 vs. NCBI nr
Match:
XP_022923751.1 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita moschata] >KAG6584457.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020048.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1449.1 bits (3750), Expect = 0.0e+00
Identity = 728/893 (81.52%), Postives = 789/893 (88.35%), Query Frame = 0
Query: 1 MNFNAVQTFVNKTLFSPLRLISSVGTVHNVSNFSLITRIETYPLFDPIQLLNDYVKSKKC 60
MNF + TFVNKTL S RLISSV TV N S+FS T+IETYPLFDP QLL+DYVKS+KC
Sbjct: 1 MNFTGIPTFVNKTLLSHRRLISSVATVDNASSFS-FTKIETYPLFDPSQLLSDYVKSRKC 60
Query: 61 SLRNTKVLHANLLGATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIII 120
SLRNTKVLHA LL ATLLHSNI+VSNSLLDCYSKSNS+D+ALKLF TMLHPNVISWNI+I
Sbjct: 61 SLRNTKVLHAKLLRATLLHSNIYVSNSLLDCYSKSNSLDHALKLFDTMLHPNVISWNILI 120
Query: 121 SCFNCNFLFLDSWRTFCRMHFLGFEPNEITYGSVLSACAAIQAPMLGKQVYSLAIRNGFF 180
S FN NFL+LDSWRTFCRMHFLGFEP+EITYGSVLSACAAIQAPM GKQVYSLA+RNGFF
Sbjct: 121 SSFNHNFLYLDSWRTFCRMHFLGFEPSEITYGSVLSACAAIQAPMFGKQVYSLAVRNGFF 180
Query: 181 VNGFVRAGMINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTM 240
VNG+VRAGMI+LFA+DSSFLDALRVF D+ CENVVCWNAIVSAAVRN EN MALDL+NTM
Sbjct: 181 VNGYVRAGMIDLFAKDSSFLDALRVFHDIHCENVVCWNAIVSAAVRNGENFMALDLYNTM 240
Query: 241 CSGFLEPNNFTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGAMD 300
C G LEPN+FTFSSVLTACAALE EFGKRVQG+VIKCGGEDVFVETALIDLY+KCG MD
Sbjct: 241 CRGLLEPNSFTFSSVLTACAALEHPEFGKRVQGKVIKCGGEDVFVETALIDLYSKCGEMD 300
Query: 301 EAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACG 360
EAVK FLRM +RNVVSWTAIISGFVQKND +MA KFF+DMRKLGEEINSYTVTSVLTAC
Sbjct: 301 EAVKIFLRMPIRNVVSWTAIISGFVQKNDYLMALKFFKDMRKLGEEINSYTVTSVLTACA 360
Query: 361 NPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWT 420
NPAMTKEAIQLHSWIL+AG+SSHAVV AALINMY+KIGAID SM VF E+D QRNL+SWT
Sbjct: 361 NPAMTKEAIQLHSWILRAGYSSHAVVGAALINMYSKIGAIDLSMTVFGEMDNQRNLSSWT 420
Query: 421 AMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSVIDCITFGRQIHCYSLKIGLI 480
AMITSF+QNND E+A ELFQKML ES+ PDTFCTSSVLSV DCITFGRQIHC++ K GLI
Sbjct: 421 AMITSFAQNNDKEKASELFQKMLRESMGPDTFCTSSVLSVTDCITFGRQIHCFTHKTGLI 480
Query: 481 FDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA----------------EM 540
FD+SVGSALFTMYSKCGYLEEAF +F NM KKDN+SWASM++ EM
Sbjct: 481 FDISVGSALFTMYSKCGYLEEAFHVFKNMAKKDNISWASMMSCFSEHGYAKEGIQLFREM 540
Query: 541 LFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNL 600
LFE+YVPD M S VL AC +LHSIQIG+EIH YS+R GL KD+A+GGSLVTMYSKCGNL
Sbjct: 541 LFEEYVPDYMILSTVLNACSVLHSIQIGREIHCYSVRLGLDKDVAIGGSLVTMYSKCGNL 600
Query: 601 EMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSILGAI 660
EMAR+VFETLP+KD+I SSLVSGYAQ KCIKE +LLF+DLL AGLAIDPFSISSILGAI
Sbjct: 601 EMARRVFETLPEKDNIACSSLVSGYAQHKCIKETILLFQDLLEAGLAIDPFSISSILGAI 660
Query: 661 ALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLIGWT 720
ALLN+PG+GTQLHA+I KV LEKDVSVGSSLVM+YSKCGSIEDCCKAFE IGKPDLIGWT
Sbjct: 661 ALLNRPGIGTQLHAIITKVGLEKDVSVGSSLVMVYSKCGSIEDCCKAFEQIGKPDLIGWT 720
Query: 721 TMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLNSMVKD 780
MIVSYAQHGKG EALCVYELMKK+GIKPD +TFVGVLSACSHNGLVDEAYFHLNSMVKD
Sbjct: 721 AMIVSYAQHGKGAEALCVYELMKKEGIKPDPVTFVGVLSACSHNGLVDEAYFHLNSMVKD 780
Query: 781 YGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWD---ASC----------- 840
YGIQPG+RHYACMVDLLGR G+LK AEELINNMPIEPDAL+W A+C
Sbjct: 781 YGIQPGHRHYACMVDLLGRCGQLKRAEELINNMPIEPDALIWGTLLAACKVHGDIELGKL 840
Query: 841 -CLKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWSVL 863
KVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGA VTK+PGWS+L
Sbjct: 841 AARKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGAGVTKEPGWSLL 892
BLAST of Sed0013243 vs. NCBI nr
Match:
XP_038893557.1 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Benincasa hispida])
HSP 1 Score: 1448.7 bits (3749), Expect = 0.0e+00
Identity = 730/893 (81.75%), Postives = 790/893 (88.47%), Query Frame = 0
Query: 1 MNFNAVQTFVNKTLFSPLRLISSVGTVHNVSNFSLITRIETYPLFDPIQLLNDYVKSKKC 60
MNF A+QTFVNKTL SP L+SSV TV +VSNFS T+I T+P DP+Q LND+VKS+KC
Sbjct: 15 MNFIAIQTFVNKTLLSPRTLVSSVATVDDVSNFS-FTKIRTFPHLDPLQFLNDFVKSRKC 74
Query: 61 SLRNTKVLHANLLGATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIII 120
SLRNTKVLHA LL A LLHSNI+VSNSLLDCYSKSN++D+ALKLF TMLHPNVISWNIII
Sbjct: 75 SLRNTKVLHAKLLRANLLHSNIYVSNSLLDCYSKSNAMDHALKLFDTMLHPNVISWNIII 134
Query: 121 SCFNCNFLFLDSWRTFCRMHFLGFEPNEITYGSVLSACAAIQAPMLGKQVYSLAIRNGFF 180
S FN FL LD+ RTFCRMHFLGFEP+EITYGSVLSACAAIQAPM GKQVYSLA+RNGFF
Sbjct: 135 SGFNYKFLHLDTCRTFCRMHFLGFEPSEITYGSVLSACAAIQAPMFGKQVYSLAVRNGFF 194
Query: 181 VNGFVRAGMINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTM 240
VNG+VRAGMI+LFA+DSSFLDALRVF DVDCENVVCWNAIVSAAVRN ENLMALDLFNTM
Sbjct: 195 VNGYVRAGMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNGENLMALDLFNTM 254
Query: 241 CSGFLEPNNFTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGAMD 300
CSGFLEPN+FTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALID YAKCG D
Sbjct: 255 CSGFLEPNSFTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDSYAKCGDPD 314
Query: 301 EAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACG 360
EAVK FLRM +RNVVSWTAIISGFVQ ND +MA KFFEDMRK GEEINSYTVTSVLTAC
Sbjct: 315 EAVKIFLRMPIRNVVSWTAIISGFVQNNDYLMALKFFEDMRKAGEEINSYTVTSVLTACA 374
Query: 361 NPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWT 420
NPAMTKEA QLHSWILKAGFSSHAVV AALINMY+KIGAID S+MVFRE+D QRNL+SWT
Sbjct: 375 NPAMTKEATQLHSWILKAGFSSHAVVAAALINMYSKIGAIDLSLMVFREMDNQRNLSSWT 434
Query: 421 AMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSVIDCITFGRQIHCYSLKIGLI 480
AMITSF+QNND E A ELF+KML ES+ PDTFCTSSVLSV DCITFGR+IHCY+LK GLI
Sbjct: 435 AMITSFAQNNDKENASELFRKMLKESVGPDTFCTSSVLSVTDCITFGREIHCYTLKTGLI 494
Query: 481 FDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA----------------EM 540
FDVSVGS+LFTMYSKCG+L+EAFQ+F+NM +KDNVSWASMI+ EM
Sbjct: 495 FDVSVGSSLFTMYSKCGHLKEAFQVFENMLEKDNVSWASMISCFLEHGYATEAIQLFREM 554
Query: 541 LFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNL 600
LFE+YVPD MT SAVLTAC +LHSIQIG+EIHGYS+RAGLGKD+AVG SLV MYSKCGNL
Sbjct: 555 LFEEYVPDHMTLSAVLTACSVLHSIQIGREIHGYSVRAGLGKDVAVGNSLVNMYSKCGNL 614
Query: 601 EMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSILGAI 660
+AR++FE LPQKDHI SSL+SGYAQQKC ++A LLFRDLLVAGLAIDPFSISSILGAI
Sbjct: 615 GLARRMFEILPQKDHIACSSLISGYAQQKCNEKAFLLFRDLLVAGLAIDPFSISSILGAI 674
Query: 661 ALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLIGWT 720
ALLN+P +GTQ+HA+IMKV LEKDVSVGSSLVM+YSKCGS+EDCCKAF IGKPDLIGWT
Sbjct: 675 ALLNRPAIGTQIHAIIMKVGLEKDVSVGSSLVMVYSKCGSVEDCCKAFGQIGKPDLIGWT 734
Query: 721 TMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLNSMVKD 780
MIVSYAQHGKG EALCVYELMKK+G KPD +TFVGVLSACSHNGLVDEAYFHLNSMVKD
Sbjct: 735 AMIVSYAQHGKGAEALCVYELMKKEGFKPDPVTFVGVLSACSHNGLVDEAYFHLNSMVKD 794
Query: 781 YGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWD---ASC----------- 840
YGIQPGYRHYACMVDLLGR GKLKEAEELIN+MPIEPDALVW A+C
Sbjct: 795 YGIQPGYRHYACMVDLLGRCGKLKEAEELINHMPIEPDALVWGTLLAACKVHGDIELGKL 854
Query: 841 -CLKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWSVL 863
KVMELKPSDTGA+VSLSNICADMGLWEEVL VRSLMKGA VTK+PGWS L
Sbjct: 855 AARKVMELKPSDTGAFVSLSNICADMGLWEEVLKVRSLMKGAGVTKEPGWSHL 906
BLAST of Sed0013243 vs. NCBI nr
Match:
XP_023001341.1 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita maxima])
HSP 1 Score: 1448.7 bits (3749), Expect = 0.0e+00
Identity = 725/893 (81.19%), Postives = 791/893 (88.58%), Query Frame = 0
Query: 1 MNFNAVQTFVNKTLFSPLRLISSVGTVHNVSNFSLITRIETYPLFDPIQLLNDYVKSKKC 60
MNF + TFVNKTL S RLISSV TV N S+FS T+IETYPLFDP QLL+DYVKS+KC
Sbjct: 1 MNFTGIPTFVNKTLLSQRRLISSVATVDNASSFS-FTKIETYPLFDPSQLLSDYVKSRKC 60
Query: 61 SLRNTKVLHANLLGATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIII 120
SLR+TKVLHA LL ATLLHSNI+VSNSLLDCYSKSNS+D+ALKLF TMLHPNVISWNI+I
Sbjct: 61 SLRHTKVLHAKLLRATLLHSNIYVSNSLLDCYSKSNSLDHALKLFDTMLHPNVISWNILI 120
Query: 121 SCFNCNFLFLDSWRTFCRMHFLGFEPNEITYGSVLSACAAIQAPMLGKQVYSLAIRNGFF 180
S FN NFL+LDSWRTFCRMHFLGFEP+EITYGSVLSACAAIQAPM GKQVYSLA+RNGFF
Sbjct: 121 SSFNHNFLYLDSWRTFCRMHFLGFEPSEITYGSVLSACAAIQAPMFGKQVYSLAVRNGFF 180
Query: 181 VNGFVRAGMINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTM 240
VNG+VRAGMI+LFA++SSFLDALRVF+DVDCENVVCWNAIVSAAVRN EN MALDL+NTM
Sbjct: 181 VNGYVRAGMIDLFAKESSFLDALRVFQDVDCENVVCWNAIVSAAVRNGENFMALDLYNTM 240
Query: 241 CSGFLEPNNFTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGAMD 300
C GFLEPN+FTFSSVLTACAALE EFGKRVQG+VIKCGGEDVFVETALIDLY+KCG MD
Sbjct: 241 CRGFLEPNSFTFSSVLTACAALEHPEFGKRVQGKVIKCGGEDVFVETALIDLYSKCGEMD 300
Query: 301 EAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACG 360
EAVK FLRM +RNVVSWTAIISGFVQKND +MA KFF+DMRKLGEEINSYTVTSVLTAC
Sbjct: 301 EAVKIFLRMPIRNVVSWTAIISGFVQKNDYLMALKFFKDMRKLGEEINSYTVTSVLTACA 360
Query: 361 NPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWT 420
NPAMTKEAIQLHSWIL+AGFSSHAVV AALINMY+KIGAID SM VF E+D QRNL+SWT
Sbjct: 361 NPAMTKEAIQLHSWILRAGFSSHAVVGAALINMYSKIGAIDLSMTVFGEMDNQRNLSSWT 420
Query: 421 AMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSVIDCITFGRQIHCYSLKIGLI 480
AMITSF+QNND E+A ELFQKML ES+ PDTFCTSSVLSV DCITFGRQIHC++ K GL+
Sbjct: 421 AMITSFAQNNDKEKASELFQKMLRESMGPDTFCTSSVLSVTDCITFGRQIHCFTHKTGLV 480
Query: 481 FDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA----------------EM 540
F +SVGSALFTMYSKCGYLEEAF +F NMPKKD++SWASM++ EM
Sbjct: 481 FGISVGSALFTMYSKCGYLEEAFHVFKNMPKKDHISWASMMSCFSEHGYAKEGIQLFREM 540
Query: 541 LFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNL 600
LFE+YVPD M + VL AC +LHSIQIG+EIH YS+R GL KD+A+GGSLVTMYSKCGNL
Sbjct: 541 LFEEYVPDSMILNTVLNACSVLHSIQIGREIHSYSVRLGLDKDVAIGGSLVTMYSKCGNL 600
Query: 601 EMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSILGAI 660
EMAR+VFETLP+KD+I SSLVSGYAQ KCIKE +LLF+DLL AGLAIDPFSISSILGAI
Sbjct: 601 EMARRVFETLPEKDNIACSSLVSGYAQHKCIKETILLFQDLLEAGLAIDPFSISSILGAI 660
Query: 661 ALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLIGWT 720
ALLN+PG+GTQLHA+I KV LEKDVS+GSSLVM+YSKCGSIEDCCKAFE IGKPDLIGWT
Sbjct: 661 ALLNRPGIGTQLHAIITKVGLEKDVSIGSSLVMVYSKCGSIEDCCKAFEQIGKPDLIGWT 720
Query: 721 TMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLNSMVKD 780
MIVSYAQHGKG EALCVYELMKK+GIKPD +TFVGVLSACSHNGLVDEAYFHLNSMVKD
Sbjct: 721 AMIVSYAQHGKGAEALCVYELMKKEGIKPDPVTFVGVLSACSHNGLVDEAYFHLNSMVKD 780
Query: 781 YGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWD---ASC----------- 840
YGIQPG+RHYACMVDLLGR G+LK AEELINNMPIEPDAL+W A+C
Sbjct: 781 YGIQPGHRHYACMVDLLGRCGQLKRAEELINNMPIEPDALIWGTLLAACKVHGDIELGKL 840
Query: 841 -CLKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWSVL 863
KVMELKPSDTGAYVSLSNICADMGLWEEVLNVRS MKGA VTK+PGWS+L
Sbjct: 841 AARKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSHMKGAGVTKEPGWSLL 892
BLAST of Sed0013243 vs. NCBI nr
Match:
XP_022137435.1 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Momordica charantia] >XP_022137436.1 pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Momordica charantia] >XP_022137437.1 pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Momordica charantia] >XP_022137439.1 pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Momordica charantia])
HSP 1 Score: 1426.0 bits (3690), Expect = 0.0e+00
Identity = 718/893 (80.40%), Postives = 783/893 (87.68%), Query Frame = 0
Query: 1 MNFNAVQTFVNKTLFSPLRLISSVGTVHNVSNFSLITRIETYPLFDPIQLLNDYVKSKKC 60
MN +QT VNKTL SPLRLISSV T SNFS +++ET L DP+QLLNDYVKS+KC
Sbjct: 1 MNLITIQTLVNKTLLSPLRLISSVATADKASNFS-FSKVETSSLLDPLQLLNDYVKSRKC 60
Query: 61 SLRNTKVLHANLLGATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIII 120
SL+NTKV+HA LL ATLLHS+I+V+NSLLDCYSKS ++DNALKLF MLH NVISWNI+I
Sbjct: 61 SLKNTKVMHAKLLRATLLHSSIYVTNSLLDCYSKSGAMDNALKLFDKMLHLNVISWNIMI 120
Query: 121 SCFNCNFLFLDSWRTFCRMHFLGFEPNEITYGSVLSACAAIQAPMLGKQVYSLAIRNGFF 180
S FN NFLFL+SWRTFCRMHFLGFEP+EITYGSVLSACAA+QAPM GKQ+YSL +RNG F
Sbjct: 121 SGFNQNFLFLESWRTFCRMHFLGFEPSEITYGSVLSACAAMQAPMFGKQIYSLVVRNGSF 180
Query: 181 VNGFVRAGMINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTM 240
VNG+VRAGMI+LFA+DSSF DALRVF DVDCENVVCWNAIVSAAVRN EN +ALDLFNTM
Sbjct: 181 VNGYVRAGMIDLFAKDSSFPDALRVFNDVDCENVVCWNAIVSAAVRNGENSVALDLFNTM 240
Query: 241 CSGFLEPNNFTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGAMD 300
CSGFLEPN+FTFSSVLTACAA+EDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCG +D
Sbjct: 241 CSGFLEPNSFTFSSVLTACAAVEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGDID 300
Query: 301 EAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACG 360
EAVKTFL+M +RNVVSWTAIISGFVQKND MA K F+DMR LGEEINSYTVTSVLTAC
Sbjct: 301 EAVKTFLQMPIRNVVSWTAIISGFVQKNDCFMALKVFKDMRNLGEEINSYTVTSVLTACA 360
Query: 361 NPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWT 420
NPAM KEAIQLHSWILKAGF S+AVVV+ALINMY+KIG ID SMMVFRE+D QRNL+SW
Sbjct: 361 NPAMRKEAIQLHSWILKAGFLSYAVVVSALINMYSKIGTIDLSMMVFREIDDQRNLSSWA 420
Query: 421 AMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSVIDCITFGRQIHCYSLKIGLI 480
AMITSF+QN D E+A ELFQKML ESI PDTFCTSSVLSV DCITFGRQIHCY+LK GLI
Sbjct: 421 AMITSFAQNMDKEKAIELFQKMLQESIGPDTFCTSSVLSVTDCITFGRQIHCYTLKTGLI 480
Query: 481 FDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA----------------EM 540
FDVSVGS+LFTMYSKCGYLEEAFQ F+NMPKKD+VSWASMI+ +M
Sbjct: 481 FDVSVGSSLFTMYSKCGYLEEAFQFFENMPKKDSVSWASMISCFSEHGYAKEAIHLFRKM 540
Query: 541 LFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNL 600
LFE+YVPD +T SAVLT C +LHSIQIG+EIHGYS+R GLGKD+A+GG LVTMYSKCGNL
Sbjct: 541 LFEEYVPDHITLSAVLTVCSVLHSIQIGREIHGYSVRVGLGKDVAIGGPLVTMYSKCGNL 600
Query: 601 EMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSILGAI 660
E+AR+VFETLPQKD I SSLVSGYAQ K I+EAL LF DLLV GLAIDPFS+SSILGAI
Sbjct: 601 ELARRVFETLPQKDQIACSSLVSGYAQHKRIQEALSLFCDLLVPGLAIDPFSVSSILGAI 660
Query: 661 ALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLIGWT 720
A+L++PG+G QLHALIMKV LEKDVSVGSSLVM+YSKCGSIEDCCKAFE IGKPDLIGWT
Sbjct: 661 AVLDRPGIGAQLHALIMKVGLEKDVSVGSSLVMVYSKCGSIEDCCKAFEQIGKPDLIGWT 720
Query: 721 TMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLNSMVKD 780
MIVSYAQHGKG EALCVYELMKK+GIKPD +TFVGVLSACSHNGLVDEAYFHLNSMVKD
Sbjct: 721 AMIVSYAQHGKGAEALCVYELMKKEGIKPDPVTFVGVLSACSHNGLVDEAYFHLNSMVKD 780
Query: 781 YGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWD---ASC----------- 840
YGIQPGYRHYACMVDLLGR G+LKEAEELINNMPIEPDAL+W A+C
Sbjct: 781 YGIQPGYRHYACMVDLLGRCGRLKEAEELINNMPIEPDALIWGTLLAACKVHGDIEFGKL 840
Query: 841 -CLKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWSVL 863
KVMELKP DTGAYVSLSNICADMGLWEEVLN+RSLMKGA VTK+PGWS L
Sbjct: 841 AAKKVMELKPCDTGAYVSLSNICADMGLWEEVLNIRSLMKGAGVTKEPGWSFL 892
BLAST of Sed0013243 vs. ExPASy Swiss-Prot
Match:
Q9CA56 (Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E69 PE=3 SV=1)
HSP 1 Score: 874.4 bits (2258), Expect = 1.1e-252
Identity = 452/877 (51.54%), Postives = 603/877 (68.76%), Query Frame = 0
Query: 15 FSPLRLISSVGTVHNVSNFSLITRIETYPLFDPIQLLNDYVKSKKCSLRNTKVLHANLLG 74
FS RL+SSV N +FS + F+P + ND S+ C+LR TK+L A+LL
Sbjct: 17 FSTSRLLSSVTNFRNQLSFSSKDSSSSSAPFNPFRFFNDQSNSRLCNLRTTKILQAHLLR 76
Query: 75 ATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIIISCFNCNFLFLDSWR 134
LL ++ ++ SLL YS S S+ +A KLF T+ P+V+S NI+IS + + LF +S R
Sbjct: 77 RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLR 136
Query: 135 TFCRMHFLGFEPNEITYGSVLSACAAIQAPMLGKQVYSLAIRNGFFVNGFVRAGMINLFA 194
F +MHFLGFE NEI+YGSV+SAC+A+QAP+ + V I+ G+F V + +I++F+
Sbjct: 137 FFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFS 196
Query: 195 RDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTMCSGFLEPNNFTFSS 254
++ F DA +VFRD NV CWN I++ A+RN+ DLF+ MC GF +P+++T+SS
Sbjct: 197 KNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSS 256
Query: 255 VLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGAMDEAVKTFLRMSVRNV 314
VL ACA+LE L FGK VQ RVIKCG EDVFV TA++DLYAKCG M EA++ F R+ +V
Sbjct: 257 VLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 315 VSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACGNPAMTKEAIQLHSW 374
VSWT ++SG+ + ND A + F++MR G EIN+ TVTSV++ACG P+M EA Q+H+W
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAW 376
Query: 375 ILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWTAMITSFSQNNDGEE 434
+ K+GF + V AALI+MY+K G ID S VF ++D + MITSFSQ+ +
Sbjct: 377 VFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGK 436
Query: 435 AGELFQKMLWESIRPDTFCTSSVLSVIDCITFGRQIHCYSLKIGLIFDVSVGSALFTMYS 494
A LF +ML E +R D F S+LSV+DC+ G+Q+H Y+LK GL+ D++VGS+LFT+YS
Sbjct: 437 AIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYS 496
Query: 495 KCGYLEEAFQIFDNMPKKDNVSWASMI----------------AEMLFEKYVPDPMTFSA 554
KCG LEE++++F +P KDN WASMI +EML + PD T +A
Sbjct: 497 KCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556
Query: 555 VLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNLEMARKVFETLPQKD 614
VLT C S+ GKEIHGY++RAG+ K + +G +LV MYSKCG+L++AR+V++ LP+ D
Sbjct: 557 VLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELD 616
Query: 615 HIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSILGAIALLNQPGVGTQLHA 674
+ SSL+SGY+Q I++ LLFRD++++G +D F+ISSIL A AL ++ +G Q+HA
Sbjct: 617 PVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHA 676
Query: 675 LIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLIGWTTMIVSYAQHGKGVE 734
I K+ L + SVGSSL+ MYSK GSI+DCCKAF I PDLI WT +I SYAQHGK E
Sbjct: 677 YITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANE 736
Query: 735 ALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLNSMVKDYGIQPGYRHYACMV 794
AL VY LMK+KG KPD +TFVGVLSACSH GLV+E+YFHLNSMVKDYGI+P RHY CMV
Sbjct: 737 ALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMV 796
Query: 795 DLLGRYGKLKEAEELINNMPIEPDALVWD---ASCCL------------KVMELKPSDTG 854
D LGR G+L+EAE INNM I+PDALVW A+C + K +EL+PSD G
Sbjct: 797 DALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAG 856
Query: 855 AYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWS 861
AY+SLSNI A++G W+EV R LMKG V K+PGWS
Sbjct: 857 AYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
BLAST of Sed0013243 vs. ExPASy Swiss-Prot
Match:
Q9FWA6 (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)
HSP 1 Score: 432.2 bits (1110), Expect = 1.4e-119
Identity = 247/728 (33.93%), Postives = 400/728 (54.95%), Query Frame = 0
Query: 189 MINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTMCSGFLEPN 248
MIN +++ + A F + +VV WN+++S ++N E+L ++++F M +E +
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179
Query: 249 NFTFSSVLTACAALEDLEFGKRVQGRVIKCGGE-DVFVETALIDLYAKCGAMDEAVKTFL 308
TF+ +L C+ LED G ++ G V++ G + DV +AL+D+YAK E+++ F
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 239
Query: 309 RMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACGNPAMTKE 368
+ +N VSW+AII+G VQ N +A KFF++M+K+ ++ SVL +C + +
Sbjct: 240 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 299
Query: 369 AIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWTAMITSFS 428
QLH+ LK+ F++ +V A ++MYAK + + ++F + N S+ AMIT +S
Sbjct: 300 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE-NLNRQSYNAMITGYS 359
Query: 429 QNNDGEEAGELFQKMLWESIRPDTFCTSSVL---SVIDCITFGRQIHCYSLKIGLIFDVS 488
Q G +A LF +++ + D S V +++ ++ G QI+ ++K L DV
Sbjct: 360 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC 419
Query: 489 VGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA----------------EMLFEK 548
V +A MY KC L EAF++FD M ++D VSW ++IA ML +
Sbjct: 420 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR 479
Query: 549 YVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNLEMAR 608
PD TF ++L AC S+ G EIH +++G+ + +VG SL+ MYSKCG +E A
Sbjct: 480 IEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 539
Query: 609 KVFETLPQKDHIVG--------------------SSLVSGYAQQKCIKEALLLFRDLLVA 668
K+ Q+ ++ G +S++SGY ++ ++A +LF ++
Sbjct: 540 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 599
Query: 669 GLAIDPFSISSILGAIALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDC 728
G+ D F+ +++L A L G+G Q+HA ++K L+ DV + S+LV MYSKCG + D
Sbjct: 600 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS 659
Query: 729 CKAFEHIGKPDLIGWTTMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHN 788
FE + D + W MI YA HGKG EA+ ++E M + IKP+ +TF+ +L AC+H
Sbjct: 660 RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHM 719
Query: 789 GLVDEAYFHLNSMVKDYGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWDA 848
GL+D+ + M +DYG+ P HY+ MVD+LG+ GK+K A ELI MP E D ++W
Sbjct: 720 GLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 779
Query: 849 ----------------SCCLKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGAR 861
++ L P D+ AY LSN+ AD G+WE+V ++R M+G +
Sbjct: 780 LLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFK 839
BLAST of Sed0013243 vs. ExPASy Swiss-Prot
Match:
Q9FIB2 (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H35 PE=3 SV=1)
HSP 1 Score: 411.0 bits (1055), Expect = 3.3e-113
Identity = 267/837 (31.90%), Postives = 442/837 (52.81%), Query Frame = 0
Query: 78 LHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIIISCFNCNFLFLDSWRTFC 137
L ++++ N+L++ Y ++ +A K+F M N +SW I+S ++ N ++
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91
Query: 138 RMHFLGFEPNEITYGSVLSACAAIQAP--MLGKQVYSLAIRNGFFVNGFVRAGMINLFAR 197
M G N+ + SVL AC I + + G+Q++ L + + V+ V +I+++ +
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 198 -DSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTMCSGFLEPNNFTFSS 257
S AL F D++ +N V WN+I+S + + A +F++M P +TF S
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGS 211
Query: 258 -VLTACAALE-DLEFGKRVQGRVIKCG-GEDVFVETALIDLYAKCGAMDEAVKTFLRMSV 317
V TAC+ E D+ +++ + K G D+FV + L+ +AK G++ A K F +M
Sbjct: 212 LVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET 271
Query: 318 RNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEE--------INSYTVTSVLTACGNPA 377
RN V+ ++ G V++ A K F DM + + ++S+ S+ G
Sbjct: 272 RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG--- 331
Query: 378 MTKEAIQLHSWILKAGFSSHAVVVA-ALINMYAKIGAIDRSMMVFREVDIQRNLASWTAM 437
K+ ++H ++ G V + L+NMYAK G+I + VF + ++ SW +M
Sbjct: 332 -LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM-TDKDSVSWNSM 391
Query: 438 ITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSVIDCITF---GRQIHCYSLKIGL 497
IT QN EA E ++ M I P +F S LS + + G+QIH SLK+G+
Sbjct: 392 ITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 451
Query: 498 IFDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIAEML-FEKYVPDP----- 557
+VSV +AL T+Y++ GYL E +IF +MP+ D VSW S+I + E+ +P+
Sbjct: 452 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFL 511
Query: 558 -----------MTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCG 617
+TFS+VL+A L ++GK+IHG +++ + + +L+ Y KCG
Sbjct: 512 NAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCG 571
Query: 618 NLEMARKVFETLPQ-KDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSIL 677
++ K+F + + +D++ +S++SGY + + +AL L +L G +D F +++L
Sbjct: 572 EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 631
Query: 678 GAIALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLI 737
A A + G ++HA ++ LE DV VGS+LV MYSKCG ++ + F + +
Sbjct: 632 SAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 691
Query: 738 GWTTMIVSYAQHGKGVEALCVYELMKKKG-IKPDLITFVGVLSACSHNGLVDEAYFHLNS 797
W +MI YA+HG+G EAL ++E MK G PD +TFVGVLSACSH GL++E + H S
Sbjct: 692 SWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFES 751
Query: 798 MVKDYGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWD---ASCCL----- 857
M YG+ P H++CM D+LGR G+L + E+ I MP++P+ L+W +CC
Sbjct: 752 MSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRK 811
Query: 858 ---------KVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWS 861
+ +L+P + YV L N+ A G WE+++ R MK A V K+ G+S
Sbjct: 812 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863
BLAST of Sed0013243 vs. ExPASy Swiss-Prot
Match:
Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 408.3 bits (1048), Expect = 2.2e-112
Identity = 268/836 (32.06%), Postives = 420/836 (50.24%), Query Frame = 0
Query: 61 SLRNTKVLHANLLGATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIII 120
SL + LH+ +L L SN +S L D Y + A K+F M + +WN +I
Sbjct: 100 SLDEGRKLHSQILKLG-LDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 159
Query: 121 SCFNCNFLFLDSWRTFCRMHFLGFEPNEITYGSVLSACAAIQAPM-LGKQVYSLAIRNGF 180
L + + F RM PNE T+ VL AC + +Q+++ + G
Sbjct: 160 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 219
Query: 181 FVNGFVRAGMINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNT 240
+ V +I+L++R+ A RVF + ++ W A++S +N A+ LF
Sbjct: 220 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 279
Query: 241 MCSGFLEPNNFTFSSVLTACAALEDLEFGKRVQGRVIKCG-GEDVFVETALIDLYAKCGA 300
M + P + FSSVL+AC +E LE G+++ G V+K G D +V AL+ LY G
Sbjct: 280 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 339
Query: 301 MDEAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTA 360
+ A F MS R+ V++ +I+G Q A + F+ M G E +S T+ S++ A
Sbjct: 340 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 399
Query: 361 CGNPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLAS 420
C QLH++ K GF+S+ + AL+N+YAK I+ ++ F E +++ N+
Sbjct: 400 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVL 459
Query: 421 WTAMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSV---IDCITFGRQIHCYSL 480
W M+ ++ +D + +F++M E I P+ + S+L + + G QIH +
Sbjct: 460 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 519
Query: 481 KIGLIFDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA------------- 540
K + V S L MY+K G L+ A+ I KD VSW +MIA
Sbjct: 520 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 579
Query: 541 ---EMLFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYS 600
+ML D + + ++AC L +++ G++IH + +G DL +LVT+YS
Sbjct: 580 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 639
Query: 601 KCGNLEMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISS 660
+CG +E + FE D+I ++LVSG+ Q +EAL +F + G+ + F+ S
Sbjct: 640 RCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGS 699
Query: 661 ILGAIALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPD 720
+ A + G Q+HA+I K + + V ++L+ MY+KCGSI D K F + +
Sbjct: 700 AVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN 759
Query: 721 LIGWTTMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLN 780
+ W +I +Y++HG G EAL ++ M ++P+ +T VGVLSACSH GLVD+ +
Sbjct: 760 EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFE 819
Query: 781 SMVKDYGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWDA--SCCL----- 840
SM +YG+ P HY C+VD+L R G L A+E I MPI+PDALVW S C+
Sbjct: 820 SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNM 879
Query: 841 --------KVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWS 861
++EL+P D+ YV LSN+ A W+ R MK V K+PG S
Sbjct: 880 EIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 933
BLAST of Sed0013243 vs. ExPASy Swiss-Prot
Match:
Q9SVA5 (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E52 PE=3 SV=1)
HSP 1 Score: 390.2 bits (1001), Expect = 6.1e-107
Identity = 241/718 (33.57%), Postives = 388/718 (54.04%), Query Frame = 0
Query: 189 MINLFARDSSFLDALRVFRDVDCENVVCWNAIVSA----AVRNRENLMALDLFNTMCSGF 248
+INL++R + A +VF + N+V W+ +VSA + ++ L+ + T
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD-- 144
Query: 249 LEPNNFTFSSVLTACAALED----LEFGKRVQGRVIKCG-GEDVFVETALIDLYAKCGAM 308
PN + SS + AC+ L+ + F ++Q ++K G DV+V T LID Y K G +
Sbjct: 145 -SPNEYILSSFIQACSGLDGRGRWMVF--QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNI 204
Query: 309 DEAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTAC 368
D A F + ++ V+WT +ISG V+ + ++ + F + + + Y +++VL+AC
Sbjct: 205 DYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSAC 264
Query: 369 GNPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASW 428
+ Q+H+ IL+ G A ++ LI+ Y K G + + +F + +N+ SW
Sbjct: 265 SILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISW 324
Query: 429 TAMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVL---SVIDCITFGRQIHCYSLK 488
T +++ + QN +EA ELF M ++PD + SS+L + + + FG Q+H Y++K
Sbjct: 325 TTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIK 384
Query: 489 IGLIFDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMI--------------- 548
L D V ++L MY+KC L +A ++FD D V + +MI
Sbjct: 385 ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEA 444
Query: 549 ----AEMLFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTM 608
+M F P +TF ++L A L S+ + K+IHG + GL D+ G +L+ +
Sbjct: 445 LNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDV 504
Query: 609 YSKCGNLEMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSI 668
YS C L+ +R VF+ + KD ++ +S+ +GY QQ +EAL LF +L ++ D F+
Sbjct: 505 YSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 564
Query: 669 SSILGAIALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGK 728
++++ A L +G + H ++K LE + + ++L+ MY+KCGS ED KAF+
Sbjct: 565 ANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAAS 624
Query: 729 PDLIGWTTMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFH 788
D++ W ++I SYA HG+G +AL + E M +GI+P+ ITFVGVLSACSH GLV++
Sbjct: 625 RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQ 684
Query: 789 LNSMVKDYGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWDA--SCCLKVM 848
M++ +GI+P HY CMV LLGR G+L +A ELI MP +P A+VW + S C K
Sbjct: 685 FELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 744
Query: 849 ELK-------------PSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWS 861
++ P D+G++ LSNI A G+W E VR MK V K+PG S
Sbjct: 745 NVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRS 795
BLAST of Sed0013243 vs. ExPASy TrEMBL
Match:
A0A6J1E7L2 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431363 PE=4 SV=1)
HSP 1 Score: 1449.1 bits (3750), Expect = 0.0e+00
Identity = 728/893 (81.52%), Postives = 789/893 (88.35%), Query Frame = 0
Query: 1 MNFNAVQTFVNKTLFSPLRLISSVGTVHNVSNFSLITRIETYPLFDPIQLLNDYVKSKKC 60
MNF + TFVNKTL S RLISSV TV N S+FS T+IETYPLFDP QLL+DYVKS+KC
Sbjct: 1 MNFTGIPTFVNKTLLSHRRLISSVATVDNASSFS-FTKIETYPLFDPSQLLSDYVKSRKC 60
Query: 61 SLRNTKVLHANLLGATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIII 120
SLRNTKVLHA LL ATLLHSNI+VSNSLLDCYSKSNS+D+ALKLF TMLHPNVISWNI+I
Sbjct: 61 SLRNTKVLHAKLLRATLLHSNIYVSNSLLDCYSKSNSLDHALKLFDTMLHPNVISWNILI 120
Query: 121 SCFNCNFLFLDSWRTFCRMHFLGFEPNEITYGSVLSACAAIQAPMLGKQVYSLAIRNGFF 180
S FN NFL+LDSWRTFCRMHFLGFEP+EITYGSVLSACAAIQAPM GKQVYSLA+RNGFF
Sbjct: 121 SSFNHNFLYLDSWRTFCRMHFLGFEPSEITYGSVLSACAAIQAPMFGKQVYSLAVRNGFF 180
Query: 181 VNGFVRAGMINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTM 240
VNG+VRAGMI+LFA+DSSFLDALRVF D+ CENVVCWNAIVSAAVRN EN MALDL+NTM
Sbjct: 181 VNGYVRAGMIDLFAKDSSFLDALRVFHDIHCENVVCWNAIVSAAVRNGENFMALDLYNTM 240
Query: 241 CSGFLEPNNFTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGAMD 300
C G LEPN+FTFSSVLTACAALE EFGKRVQG+VIKCGGEDVFVETALIDLY+KCG MD
Sbjct: 241 CRGLLEPNSFTFSSVLTACAALEHPEFGKRVQGKVIKCGGEDVFVETALIDLYSKCGEMD 300
Query: 301 EAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACG 360
EAVK FLRM +RNVVSWTAIISGFVQKND +MA KFF+DMRKLGEEINSYTVTSVLTAC
Sbjct: 301 EAVKIFLRMPIRNVVSWTAIISGFVQKNDYLMALKFFKDMRKLGEEINSYTVTSVLTACA 360
Query: 361 NPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWT 420
NPAMTKEAIQLHSWIL+AG+SSHAVV AALINMY+KIGAID SM VF E+D QRNL+SWT
Sbjct: 361 NPAMTKEAIQLHSWILRAGYSSHAVVGAALINMYSKIGAIDLSMTVFGEMDNQRNLSSWT 420
Query: 421 AMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSVIDCITFGRQIHCYSLKIGLI 480
AMITSF+QNND E+A ELFQKML ES+ PDTFCTSSVLSV DCITFGRQIHC++ K GLI
Sbjct: 421 AMITSFAQNNDKEKASELFQKMLRESMGPDTFCTSSVLSVTDCITFGRQIHCFTHKTGLI 480
Query: 481 FDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA----------------EM 540
FD+SVGSALFTMYSKCGYLEEAF +F NM KKDN+SWASM++ EM
Sbjct: 481 FDISVGSALFTMYSKCGYLEEAFHVFKNMAKKDNISWASMMSCFSEHGYAKEGIQLFREM 540
Query: 541 LFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNL 600
LFE+YVPD M S VL AC +LHSIQIG+EIH YS+R GL KD+A+GGSLVTMYSKCGNL
Sbjct: 541 LFEEYVPDYMILSTVLNACSVLHSIQIGREIHCYSVRLGLDKDVAIGGSLVTMYSKCGNL 600
Query: 601 EMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSILGAI 660
EMAR+VFETLP+KD+I SSLVSGYAQ KCIKE +LLF+DLL AGLAIDPFSISSILGAI
Sbjct: 601 EMARRVFETLPEKDNIACSSLVSGYAQHKCIKETILLFQDLLEAGLAIDPFSISSILGAI 660
Query: 661 ALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLIGWT 720
ALLN+PG+GTQLHA+I KV LEKDVSVGSSLVM+YSKCGSIEDCCKAFE IGKPDLIGWT
Sbjct: 661 ALLNRPGIGTQLHAIITKVGLEKDVSVGSSLVMVYSKCGSIEDCCKAFEQIGKPDLIGWT 720
Query: 721 TMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLNSMVKD 780
MIVSYAQHGKG EALCVYELMKK+GIKPD +TFVGVLSACSHNGLVDEAYFHLNSMVKD
Sbjct: 721 AMIVSYAQHGKGAEALCVYELMKKEGIKPDPVTFVGVLSACSHNGLVDEAYFHLNSMVKD 780
Query: 781 YGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWD---ASC----------- 840
YGIQPG+RHYACMVDLLGR G+LK AEELINNMPIEPDAL+W A+C
Sbjct: 781 YGIQPGHRHYACMVDLLGRCGQLKRAEELINNMPIEPDALIWGTLLAACKVHGDIELGKL 840
Query: 841 -CLKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWSVL 863
KVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGA VTK+PGWS+L
Sbjct: 841 AARKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGAGVTKEPGWSLL 892
BLAST of Sed0013243 vs. ExPASy TrEMBL
Match:
A0A6J1KIC5 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495501 PE=4 SV=1)
HSP 1 Score: 1448.7 bits (3749), Expect = 0.0e+00
Identity = 725/893 (81.19%), Postives = 791/893 (88.58%), Query Frame = 0
Query: 1 MNFNAVQTFVNKTLFSPLRLISSVGTVHNVSNFSLITRIETYPLFDPIQLLNDYVKSKKC 60
MNF + TFVNKTL S RLISSV TV N S+FS T+IETYPLFDP QLL+DYVKS+KC
Sbjct: 1 MNFTGIPTFVNKTLLSQRRLISSVATVDNASSFS-FTKIETYPLFDPSQLLSDYVKSRKC 60
Query: 61 SLRNTKVLHANLLGATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIII 120
SLR+TKVLHA LL ATLLHSNI+VSNSLLDCYSKSNS+D+ALKLF TMLHPNVISWNI+I
Sbjct: 61 SLRHTKVLHAKLLRATLLHSNIYVSNSLLDCYSKSNSLDHALKLFDTMLHPNVISWNILI 120
Query: 121 SCFNCNFLFLDSWRTFCRMHFLGFEPNEITYGSVLSACAAIQAPMLGKQVYSLAIRNGFF 180
S FN NFL+LDSWRTFCRMHFLGFEP+EITYGSVLSACAAIQAPM GKQVYSLA+RNGFF
Sbjct: 121 SSFNHNFLYLDSWRTFCRMHFLGFEPSEITYGSVLSACAAIQAPMFGKQVYSLAVRNGFF 180
Query: 181 VNGFVRAGMINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTM 240
VNG+VRAGMI+LFA++SSFLDALRVF+DVDCENVVCWNAIVSAAVRN EN MALDL+NTM
Sbjct: 181 VNGYVRAGMIDLFAKESSFLDALRVFQDVDCENVVCWNAIVSAAVRNGENFMALDLYNTM 240
Query: 241 CSGFLEPNNFTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGAMD 300
C GFLEPN+FTFSSVLTACAALE EFGKRVQG+VIKCGGEDVFVETALIDLY+KCG MD
Sbjct: 241 CRGFLEPNSFTFSSVLTACAALEHPEFGKRVQGKVIKCGGEDVFVETALIDLYSKCGEMD 300
Query: 301 EAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACG 360
EAVK FLRM +RNVVSWTAIISGFVQKND +MA KFF+DMRKLGEEINSYTVTSVLTAC
Sbjct: 301 EAVKIFLRMPIRNVVSWTAIISGFVQKNDYLMALKFFKDMRKLGEEINSYTVTSVLTACA 360
Query: 361 NPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWT 420
NPAMTKEAIQLHSWIL+AGFSSHAVV AALINMY+KIGAID SM VF E+D QRNL+SWT
Sbjct: 361 NPAMTKEAIQLHSWILRAGFSSHAVVGAALINMYSKIGAIDLSMTVFGEMDNQRNLSSWT 420
Query: 421 AMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSVIDCITFGRQIHCYSLKIGLI 480
AMITSF+QNND E+A ELFQKML ES+ PDTFCTSSVLSV DCITFGRQIHC++ K GL+
Sbjct: 421 AMITSFAQNNDKEKASELFQKMLRESMGPDTFCTSSVLSVTDCITFGRQIHCFTHKTGLV 480
Query: 481 FDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA----------------EM 540
F +SVGSALFTMYSKCGYLEEAF +F NMPKKD++SWASM++ EM
Sbjct: 481 FGISVGSALFTMYSKCGYLEEAFHVFKNMPKKDHISWASMMSCFSEHGYAKEGIQLFREM 540
Query: 541 LFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNL 600
LFE+YVPD M + VL AC +LHSIQIG+EIH YS+R GL KD+A+GGSLVTMYSKCGNL
Sbjct: 541 LFEEYVPDSMILNTVLNACSVLHSIQIGREIHSYSVRLGLDKDVAIGGSLVTMYSKCGNL 600
Query: 601 EMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSILGAI 660
EMAR+VFETLP+KD+I SSLVSGYAQ KCIKE +LLF+DLL AGLAIDPFSISSILGAI
Sbjct: 601 EMARRVFETLPEKDNIACSSLVSGYAQHKCIKETILLFQDLLEAGLAIDPFSISSILGAI 660
Query: 661 ALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLIGWT 720
ALLN+PG+GTQLHA+I KV LEKDVS+GSSLVM+YSKCGSIEDCCKAFE IGKPDLIGWT
Sbjct: 661 ALLNRPGIGTQLHAIITKVGLEKDVSIGSSLVMVYSKCGSIEDCCKAFEQIGKPDLIGWT 720
Query: 721 TMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLNSMVKD 780
MIVSYAQHGKG EALCVYELMKK+GIKPD +TFVGVLSACSHNGLVDEAYFHLNSMVKD
Sbjct: 721 AMIVSYAQHGKGAEALCVYELMKKEGIKPDPVTFVGVLSACSHNGLVDEAYFHLNSMVKD 780
Query: 781 YGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWD---ASC----------- 840
YGIQPG+RHYACMVDLLGR G+LK AEELINNMPIEPDAL+W A+C
Sbjct: 781 YGIQPGHRHYACMVDLLGRCGQLKRAEELINNMPIEPDALIWGTLLAACKVHGDIELGKL 840
Query: 841 -CLKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWSVL 863
KVMELKPSDTGAYVSLSNICADMGLWEEVLNVRS MKGA VTK+PGWS+L
Sbjct: 841 AARKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSHMKGAGVTKEPGWSLL 892
BLAST of Sed0013243 vs. ExPASy TrEMBL
Match:
A0A6J1C6M8 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008883 PE=4 SV=1)
HSP 1 Score: 1426.0 bits (3690), Expect = 0.0e+00
Identity = 718/893 (80.40%), Postives = 783/893 (87.68%), Query Frame = 0
Query: 1 MNFNAVQTFVNKTLFSPLRLISSVGTVHNVSNFSLITRIETYPLFDPIQLLNDYVKSKKC 60
MN +QT VNKTL SPLRLISSV T SNFS +++ET L DP+QLLNDYVKS+KC
Sbjct: 1 MNLITIQTLVNKTLLSPLRLISSVATADKASNFS-FSKVETSSLLDPLQLLNDYVKSRKC 60
Query: 61 SLRNTKVLHANLLGATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIII 120
SL+NTKV+HA LL ATLLHS+I+V+NSLLDCYSKS ++DNALKLF MLH NVISWNI+I
Sbjct: 61 SLKNTKVMHAKLLRATLLHSSIYVTNSLLDCYSKSGAMDNALKLFDKMLHLNVISWNIMI 120
Query: 121 SCFNCNFLFLDSWRTFCRMHFLGFEPNEITYGSVLSACAAIQAPMLGKQVYSLAIRNGFF 180
S FN NFLFL+SWRTFCRMHFLGFEP+EITYGSVLSACAA+QAPM GKQ+YSL +RNG F
Sbjct: 121 SGFNQNFLFLESWRTFCRMHFLGFEPSEITYGSVLSACAAMQAPMFGKQIYSLVVRNGSF 180
Query: 181 VNGFVRAGMINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTM 240
VNG+VRAGMI+LFA+DSSF DALRVF DVDCENVVCWNAIVSAAVRN EN +ALDLFNTM
Sbjct: 181 VNGYVRAGMIDLFAKDSSFPDALRVFNDVDCENVVCWNAIVSAAVRNGENSVALDLFNTM 240
Query: 241 CSGFLEPNNFTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGAMD 300
CSGFLEPN+FTFSSVLTACAA+EDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCG +D
Sbjct: 241 CSGFLEPNSFTFSSVLTACAAVEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGDID 300
Query: 301 EAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACG 360
EAVKTFL+M +RNVVSWTAIISGFVQKND MA K F+DMR LGEEINSYTVTSVLTAC
Sbjct: 301 EAVKTFLQMPIRNVVSWTAIISGFVQKNDCFMALKVFKDMRNLGEEINSYTVTSVLTACA 360
Query: 361 NPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWT 420
NPAM KEAIQLHSWILKAGF S+AVVV+ALINMY+KIG ID SMMVFRE+D QRNL+SW
Sbjct: 361 NPAMRKEAIQLHSWILKAGFLSYAVVVSALINMYSKIGTIDLSMMVFREIDDQRNLSSWA 420
Query: 421 AMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSVIDCITFGRQIHCYSLKIGLI 480
AMITSF+QN D E+A ELFQKML ESI PDTFCTSSVLSV DCITFGRQIHCY+LK GLI
Sbjct: 421 AMITSFAQNMDKEKAIELFQKMLQESIGPDTFCTSSVLSVTDCITFGRQIHCYTLKTGLI 480
Query: 481 FDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA----------------EM 540
FDVSVGS+LFTMYSKCGYLEEAFQ F+NMPKKD+VSWASMI+ +M
Sbjct: 481 FDVSVGSSLFTMYSKCGYLEEAFQFFENMPKKDSVSWASMISCFSEHGYAKEAIHLFRKM 540
Query: 541 LFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNL 600
LFE+YVPD +T SAVLT C +LHSIQIG+EIHGYS+R GLGKD+A+GG LVTMYSKCGNL
Sbjct: 541 LFEEYVPDHITLSAVLTVCSVLHSIQIGREIHGYSVRVGLGKDVAIGGPLVTMYSKCGNL 600
Query: 601 EMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSILGAI 660
E+AR+VFETLPQKD I SSLVSGYAQ K I+EAL LF DLLV GLAIDPFS+SSILGAI
Sbjct: 601 ELARRVFETLPQKDQIACSSLVSGYAQHKRIQEALSLFCDLLVPGLAIDPFSVSSILGAI 660
Query: 661 ALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLIGWT 720
A+L++PG+G QLHALIMKV LEKDVSVGSSLVM+YSKCGSIEDCCKAFE IGKPDLIGWT
Sbjct: 661 AVLDRPGIGAQLHALIMKVGLEKDVSVGSSLVMVYSKCGSIEDCCKAFEQIGKPDLIGWT 720
Query: 721 TMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLNSMVKD 780
MIVSYAQHGKG EALCVYELMKK+GIKPD +TFVGVLSACSHNGLVDEAYFHLNSMVKD
Sbjct: 721 AMIVSYAQHGKGAEALCVYELMKKEGIKPDPVTFVGVLSACSHNGLVDEAYFHLNSMVKD 780
Query: 781 YGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWD---ASC----------- 840
YGIQPGYRHYACMVDLLGR G+LKEAEELINNMPIEPDAL+W A+C
Sbjct: 781 YGIQPGYRHYACMVDLLGRCGRLKEAEELINNMPIEPDALIWGTLLAACKVHGDIEFGKL 840
Query: 841 -CLKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWSVL 863
KVMELKP DTGAYVSLSNICADMGLWEEVLN+RSLMKGA VTK+PGWS L
Sbjct: 841 AAKKVMELKPCDTGAYVSLSNICADMGLWEEVLNIRSLMKGAGVTKEPGWSFL 892
BLAST of Sed0013243 vs. ExPASy TrEMBL
Match:
A0A1S3B4I2 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485891 PE=4 SV=1)
HSP 1 Score: 1298.9 bits (3360), Expect = 0.0e+00
Identity = 662/893 (74.13%), Postives = 745/893 (83.43%), Query Frame = 0
Query: 1 MNFNAVQTFVNKTLFSPLRLISSVGTVHNVSNFSLITRIETYPLFDPIQLLNDYVKSKKC 60
M+F A+QT VNKTL SP RL+SSV TV NVSNFS T+IET+ F+P++LLND+VK
Sbjct: 1 MSFIAIQTIVNKTLLSPRRLVSSVATVDNVSNFS-FTKIETFAPFNPVRLLNDFVKLGNF 60
Query: 61 SLRNTKVLHANLLGATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIII 120
SLRNTKVLHA L T +I+VSNSLL CYSKSN++D+ALKLF T+L+PNVISWN II
Sbjct: 61 SLRNTKVLHAKFLRVT-PRIDIYVSNSLLHCYSKSNAMDHALKLFDTILNPNVISWNTII 120
Query: 121 SCFNCNFLFLDSWRTFCRMHFLGFEPNEITYGSVLSACAAIQAPMLGKQVYSLAIRNGFF 180
+ FN NFL LDS R FC MH+LGF+PNE+T GSVLSACAAIQA M GKQVYSLA+RNGFF
Sbjct: 121 TGFNNNFLHLDSLRIFCWMHYLGFKPNEVTCGSVLSACAAIQATMFGKQVYSLAVRNGFF 180
Query: 181 VNGFVRAGMINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTM 240
NG+VR MI+LFA+DS FLDALRVF DVDC NVVCWNAIVSAAV N E LMALDLFN M
Sbjct: 181 DNGYVRTVMIDLFAKDSKFLDALRVFHDVDCANVVCWNAIVSAAVTNGEYLMALDLFNRM 240
Query: 241 CSGFLEPNNFTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGAMD 300
CS FLEPN+FTFSSVLTAC+AL+DLEFGK VQGRVIKCGG DVFVETAL+ LYAKCG MD
Sbjct: 241 CSKFLEPNSFTFSSVLTACSALQDLEFGKSVQGRVIKCGGGDVFVETALVSLYAKCGDMD 300
Query: 301 EAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACG 360
EAVK F +M +RNVVSWT I+SGFVQ ND +M K FED+RK+GEEINSYTVT++L AC
Sbjct: 301 EAVKIFFQMPIRNVVSWTVIMSGFVQNNDYLMVIKIFEDLRKIGEEINSYTVTTLLRACA 360
Query: 361 NPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWT 420
NP M KEA QLHSWILKAGFSS A VVAALI MY+KIGAID S+MVFRE+D RNL+SWT
Sbjct: 361 NPGMRKEATQLHSWILKAGFSSQAEVVAALIIMYSKIGAIDLSLMVFREMDNHRNLSSWT 420
Query: 421 AMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSVIDCITFGRQIHCYSLKIGLI 480
AMI S ++NND EEA +LF+KML E + PD+ CTS++LS+ DCITFGRQIHCY+LK LI
Sbjct: 421 AMILSLAKNNDKEEASDLFRKMLREKMEPDSVCTSTLLSLTDCITFGRQIHCYTLKTELI 480
Query: 481 FDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA----------------EM 540
F+VSVGS+LFTMYSKCG+L+EAFQ+F+NMP+KDNVSW MI+ EM
Sbjct: 481 FNVSVGSSLFTMYSKCGHLKEAFQVFENMPEKDNVSWTLMISCFSEHGFAREAIQLFREM 540
Query: 541 LFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNL 600
LFE+ VPD + SAVLTACY L SIQ+G+EIHGYSIR GL ++++ G SLVTMYSKCGNL
Sbjct: 541 LFEECVPDGTSLSAVLTACYALPSIQLGREIHGYSIRVGLSENVSFGSSLVTMYSKCGNL 600
Query: 601 EMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSILGAI 660
+AR+VFETLPQKD IV SSLVSGYAQQKCIKEALLLFR LLVAGLAIDPFSISSILG I
Sbjct: 601 ALARRVFETLPQKDDIVCSSLVSGYAQQKCIKEALLLFRSLLVAGLAIDPFSISSILGGI 660
Query: 661 ALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLIGWT 720
ALL +P +GTQ+HALI+KV LEKDVSVGSSLVM+YS+CGSIEDCCKAF IGKPDLIGWT
Sbjct: 661 ALLKRPAIGTQIHALIVKVGLEKDVSVGSSLVMVYSRCGSIEDCCKAFGQIGKPDLIGWT 720
Query: 721 TMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLNSMVKD 780
+MIVSYAQHGKG EALC YELMKK+G KPD +TFVGVLSACSHNGLVDEAYFHLNSMV+D
Sbjct: 721 SMIVSYAQHGKGAEALCAYELMKKEGFKPDPVTFVGVLSACSHNGLVDEAYFHLNSMVED 780
Query: 781 YGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWD---ASC----------- 840
YGIQPG RHYAC+VDLLGR GKLKEAEELIN+MPIEPDAL+W A+C
Sbjct: 781 YGIQPGCRHYACLVDLLGRCGKLKEAEELINHMPIEPDALIWGTLLAACKVHGDIELGKL 840
Query: 841 -CLKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWSVL 863
KVMEL P DTGAYVSLSNICADMGLWEEVLNVRSLMK A VTK+ GWS L
Sbjct: 841 AARKVMELNPGDTGAYVSLSNICADMGLWEEVLNVRSLMKEAGVTKESGWSFL 891
BLAST of Sed0013243 vs. ExPASy TrEMBL
Match:
A0A5D3BIJ5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00800 PE=4 SV=1)
HSP 1 Score: 1267.3 bits (3278), Expect = 0.0e+00
Identity = 645/871 (74.05%), Postives = 727/871 (83.47%), Query Frame = 0
Query: 1 MNFNAVQTFVNKTLFSPLRLISSVGTVHNVSNFSLITRIETYPLFDPIQLLNDYVKSKKC 60
M+F A+QT VNKTL SP RL+SSV TV NVSNFS T+IET+ F+P++LLND+VK
Sbjct: 40 MSFIAIQTIVNKTLLSPRRLVSSVATVDNVSNFS-FTKIETFAPFNPVRLLNDFVKLGNF 99
Query: 61 SLRNTKVLHANLLGATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIII 120
SLRNTKVLHA L T +I+VSNSLL CYSKSN++D+ALKLF T+L+PNVISWN II
Sbjct: 100 SLRNTKVLHAKFLRVT-PRIDIYVSNSLLHCYSKSNAMDHALKLFDTILNPNVISWNTII 159
Query: 121 SCFNCNFLFLDSWRTFCRMHFLGFEPNEITYGSVLSACAAIQAPMLGKQVYSLAIRNGFF 180
+ FN NFL LDS R FC MH+LGF+PNE+T GSVLSACAAIQA M GKQVYSLA+RNGFF
Sbjct: 160 TGFNNNFLHLDSLRIFCWMHYLGFKPNEVTCGSVLSACAAIQATMFGKQVYSLAVRNGFF 219
Query: 181 VNGFVRAGMINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTM 240
NG+VR MI+LFA+DS FLDALRVF DVDC NVVCWNAIVSAAV N E LMALDLFN M
Sbjct: 220 DNGYVRTVMIDLFAKDSKFLDALRVFHDVDCANVVCWNAIVSAAVTNGEYLMALDLFNRM 279
Query: 241 CSGFLEPNNFTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGAMD 300
CS FLEPN+FTFSSVLTAC+AL+DLEFGK VQGRVIKCGG DVFVETAL+ LYAKCG MD
Sbjct: 280 CSKFLEPNSFTFSSVLTACSALQDLEFGKSVQGRVIKCGGGDVFVETALVSLYAKCGDMD 339
Query: 301 EAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACG 360
EAVK F +M +RNVVSWT I+SGFVQ ND +M K FED+RK+GEEINSYTVT++L AC
Sbjct: 340 EAVKIFFQMPIRNVVSWTVIMSGFVQNNDYLMVIKIFEDLRKIGEEINSYTVTTLLRACA 399
Query: 361 NPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWT 420
NP M KEA QLHSWILKAGFSS A VVAALI MY+KIGAID S+MVFRE+D RNL+SWT
Sbjct: 400 NPGMRKEATQLHSWILKAGFSSQAEVVAALIIMYSKIGAIDLSLMVFREMDNHRNLSSWT 459
Query: 421 AMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSVIDCITFGRQIHCYSLKIGLI 480
AMI S ++NND EEA +LF+KML E + PD+ CTS++LS+ DCITFGRQIHCY+LK LI
Sbjct: 460 AMILSLAKNNDKEEASDLFRKMLREKMEPDSVCTSTLLSLTDCITFGRQIHCYTLKTELI 519
Query: 481 FDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA----------------EM 540
F+VSVGS+LFTMYSKCG+L+EAFQ+F+NMP+KDNVSW MI+ EM
Sbjct: 520 FNVSVGSSLFTMYSKCGHLKEAFQVFENMPEKDNVSWTLMISCFSEHGFAREAIQLFREM 579
Query: 541 LFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNL 600
LFE+ VPD + SAVLTACY L SIQ+G+EIHGYSIR GL ++++ G SLVTMYSKCGNL
Sbjct: 580 LFEECVPDGTSLSAVLTACYALPSIQLGREIHGYSIRVGLSENVSFGSSLVTMYSKCGNL 639
Query: 601 EMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSILGAI 660
+AR+VFETLPQKD IV SSLVSGYAQQKCIKEALLLFR LLVAGLAIDPFSISSILG I
Sbjct: 640 ALARRVFETLPQKDDIVCSSLVSGYAQQKCIKEALLLFRSLLVAGLAIDPFSISSILGGI 699
Query: 661 ALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLIGWT 720
ALL +P +GTQ+HALI+KV LEKDVSVGSSLVM+YS+CGSIEDCCKAF IGKPDLIGWT
Sbjct: 700 ALLKRPAIGTQIHALIVKVGLEKDVSVGSSLVMVYSRCGSIEDCCKAFGQIGKPDLIGWT 759
Query: 721 TMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLNSMVKD 780
+MIVSYAQHGKG EALC YELMKK+G KPD +TFVGVLSACSHNGLVDEAYFHLNSMV+D
Sbjct: 760 SMIVSYAQHGKGAEALCAYELMKKEGFKPDPVTFVGVLSACSHNGLVDEAYFHLNSMVED 819
Query: 781 YGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWD---ASC----------- 840
YGIQPG RHYAC+VDLLGR GKLKEAEELIN+MPIEPDAL+W A+C
Sbjct: 820 YGIQPGCRHYACLVDLLGRCGKLKEAEELINHMPIEPDALIWGTLLAACKVHGDIELGKL 879
BLAST of Sed0013243 vs. TAIR 10
Match:
AT1G74600.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 874.4 bits (2258), Expect = 7.6e-254
Identity = 452/877 (51.54%), Postives = 603/877 (68.76%), Query Frame = 0
Query: 15 FSPLRLISSVGTVHNVSNFSLITRIETYPLFDPIQLLNDYVKSKKCSLRNTKVLHANLLG 74
FS RL+SSV N +FS + F+P + ND S+ C+LR TK+L A+LL
Sbjct: 17 FSTSRLLSSVTNFRNQLSFSSKDSSSSSAPFNPFRFFNDQSNSRLCNLRTTKILQAHLLR 76
Query: 75 ATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIIISCFNCNFLFLDSWR 134
LL ++ ++ SLL YS S S+ +A KLF T+ P+V+S NI+IS + + LF +S R
Sbjct: 77 RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLR 136
Query: 135 TFCRMHFLGFEPNEITYGSVLSACAAIQAPMLGKQVYSLAIRNGFFVNGFVRAGMINLFA 194
F +MHFLGFE NEI+YGSV+SAC+A+QAP+ + V I+ G+F V + +I++F+
Sbjct: 137 FFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFS 196
Query: 195 RDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTMCSGFLEPNNFTFSS 254
++ F DA +VFRD NV CWN I++ A+RN+ DLF+ MC GF +P+++T+SS
Sbjct: 197 KNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSS 256
Query: 255 VLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCGAMDEAVKTFLRMSVRNV 314
VL ACA+LE L FGK VQ RVIKCG EDVFV TA++DLYAKCG M EA++ F R+ +V
Sbjct: 257 VLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 315 VSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACGNPAMTKEAIQLHSW 374
VSWT ++SG+ + ND A + F++MR G EIN+ TVTSV++ACG P+M EA Q+H+W
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAW 376
Query: 375 ILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWTAMITSFSQNNDGEE 434
+ K+GF + V AALI+MY+K G ID S VF ++D + MITSFSQ+ +
Sbjct: 377 VFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGK 436
Query: 435 AGELFQKMLWESIRPDTFCTSSVLSVIDCITFGRQIHCYSLKIGLIFDVSVGSALFTMYS 494
A LF +ML E +R D F S+LSV+DC+ G+Q+H Y+LK GL+ D++VGS+LFT+YS
Sbjct: 437 AIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYS 496
Query: 495 KCGYLEEAFQIFDNMPKKDNVSWASMI----------------AEMLFEKYVPDPMTFSA 554
KCG LEE++++F +P KDN WASMI +EML + PD T +A
Sbjct: 497 KCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556
Query: 555 VLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNLEMARKVFETLPQKD 614
VLT C S+ GKEIHGY++RAG+ K + +G +LV MYSKCG+L++AR+V++ LP+ D
Sbjct: 557 VLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELD 616
Query: 615 HIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSILGAIALLNQPGVGTQLHA 674
+ SSL+SGY+Q I++ LLFRD++++G +D F+ISSIL A AL ++ +G Q+HA
Sbjct: 617 PVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHA 676
Query: 675 LIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLIGWTTMIVSYAQHGKGVE 734
I K+ L + SVGSSL+ MYSK GSI+DCCKAF I PDLI WT +I SYAQHGK E
Sbjct: 677 YITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANE 736
Query: 735 ALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLNSMVKDYGIQPGYRHYACMV 794
AL VY LMK+KG KPD +TFVGVLSACSH GLV+E+YFHLNSMVKDYGI+P RHY CMV
Sbjct: 737 ALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMV 796
Query: 795 DLLGRYGKLKEAEELINNMPIEPDALVWD---ASCCL------------KVMELKPSDTG 854
D LGR G+L+EAE INNM I+PDALVW A+C + K +EL+PSD G
Sbjct: 797 DALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAG 856
Query: 855 AYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWS 861
AY+SLSNI A++G W+EV R LMKG V K+PGWS
Sbjct: 857 AYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
BLAST of Sed0013243 vs. TAIR 10
Match:
AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 432.2 bits (1110), Expect = 9.9e-121
Identity = 247/728 (33.93%), Postives = 400/728 (54.95%), Query Frame = 0
Query: 189 MINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTMCSGFLEPN 248
MIN +++ + A F + +VV WN+++S ++N E+L ++++F M +E +
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179
Query: 249 NFTFSSVLTACAALEDLEFGKRVQGRVIKCGGE-DVFVETALIDLYAKCGAMDEAVKTFL 308
TF+ +L C+ LED G ++ G V++ G + DV +AL+D+YAK E+++ F
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 239
Query: 309 RMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTACGNPAMTKE 368
+ +N VSW+AII+G VQ N +A KFF++M+K+ ++ SVL +C + +
Sbjct: 240 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 299
Query: 369 AIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASWTAMITSFS 428
QLH+ LK+ F++ +V A ++MYAK + + ++F + N S+ AMIT +S
Sbjct: 300 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE-NLNRQSYNAMITGYS 359
Query: 429 QNNDGEEAGELFQKMLWESIRPDTFCTSSVL---SVIDCITFGRQIHCYSLKIGLIFDVS 488
Q G +A LF +++ + D S V +++ ++ G QI+ ++K L DV
Sbjct: 360 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC 419
Query: 489 VGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA----------------EMLFEK 548
V +A MY KC L EAF++FD M ++D VSW ++IA ML +
Sbjct: 420 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR 479
Query: 549 YVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCGNLEMAR 608
PD TF ++L AC S+ G EIH +++G+ + +VG SL+ MYSKCG +E A
Sbjct: 480 IEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 539
Query: 609 KVFETLPQKDHIVG--------------------SSLVSGYAQQKCIKEALLLFRDLLVA 668
K+ Q+ ++ G +S++SGY ++ ++A +LF ++
Sbjct: 540 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 599
Query: 669 GLAIDPFSISSILGAIALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDC 728
G+ D F+ +++L A L G+G Q+HA ++K L+ DV + S+LV MYSKCG + D
Sbjct: 600 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS 659
Query: 729 CKAFEHIGKPDLIGWTTMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHN 788
FE + D + W MI YA HGKG EA+ ++E M + IKP+ +TF+ +L AC+H
Sbjct: 660 RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHM 719
Query: 789 GLVDEAYFHLNSMVKDYGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWDA 848
GL+D+ + M +DYG+ P HY+ MVD+LG+ GK+K A ELI MP E D ++W
Sbjct: 720 GLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 779
Query: 849 ----------------SCCLKVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGAR 861
++ L P D+ AY LSN+ AD G+WE+V ++R M+G +
Sbjct: 780 LLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFK 839
BLAST of Sed0013243 vs. TAIR 10
Match:
AT5G09950.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 411.0 bits (1055), Expect = 2.4e-114
Identity = 267/837 (31.90%), Postives = 442/837 (52.81%), Query Frame = 0
Query: 78 LHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIIISCFNCNFLFLDSWRTFC 137
L ++++ N+L++ Y ++ +A K+F M N +SW I+S ++ N ++
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91
Query: 138 RMHFLGFEPNEITYGSVLSACAAIQAP--MLGKQVYSLAIRNGFFVNGFVRAGMINLFAR 197
M G N+ + SVL AC I + + G+Q++ L + + V+ V +I+++ +
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 198 -DSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNTMCSGFLEPNNFTFSS 257
S AL F D++ +N V WN+I+S + + A +F++M P +TF S
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGS 211
Query: 258 -VLTACAALE-DLEFGKRVQGRVIKCG-GEDVFVETALIDLYAKCGAMDEAVKTFLRMSV 317
V TAC+ E D+ +++ + K G D+FV + L+ +AK G++ A K F +M
Sbjct: 212 LVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET 271
Query: 318 RNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEE--------INSYTVTSVLTACGNPA 377
RN V+ ++ G V++ A K F DM + + ++S+ S+ G
Sbjct: 272 RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG--- 331
Query: 378 MTKEAIQLHSWILKAGFSSHAVVVA-ALINMYAKIGAIDRSMMVFREVDIQRNLASWTAM 437
K+ ++H ++ G V + L+NMYAK G+I + VF + ++ SW +M
Sbjct: 332 -LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM-TDKDSVSWNSM 391
Query: 438 ITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSVIDCITF---GRQIHCYSLKIGL 497
IT QN EA E ++ M I P +F S LS + + G+QIH SLK+G+
Sbjct: 392 ITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 451
Query: 498 IFDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIAEML-FEKYVPDP----- 557
+VSV +AL T+Y++ GYL E +IF +MP+ D VSW S+I + E+ +P+
Sbjct: 452 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFL 511
Query: 558 -----------MTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYSKCG 617
+TFS+VL+A L ++GK+IHG +++ + + +L+ Y KCG
Sbjct: 512 NAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCG 571
Query: 618 NLEMARKVFETLPQ-KDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISSIL 677
++ K+F + + +D++ +S++SGY + + +AL L +L G +D F +++L
Sbjct: 572 EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 631
Query: 678 GAIALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPDLI 737
A A + G ++HA ++ LE DV VGS+LV MYSKCG ++ + F + +
Sbjct: 632 SAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 691
Query: 738 GWTTMIVSYAQHGKGVEALCVYELMKKKG-IKPDLITFVGVLSACSHNGLVDEAYFHLNS 797
W +MI YA+HG+G EAL ++E MK G PD +TFVGVLSACSH GL++E + H S
Sbjct: 692 SWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFES 751
Query: 798 MVKDYGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWD---ASCCL----- 857
M YG+ P H++CM D+LGR G+L + E+ I MP++P+ L+W +CC
Sbjct: 752 MSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRK 811
Query: 858 ---------KVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWS 861
+ +L+P + YV L N+ A G WE+++ R MK A V K+ G+S
Sbjct: 812 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863
BLAST of Sed0013243 vs. TAIR 10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 408.3 bits (1048), Expect = 1.5e-113
Identity = 268/836 (32.06%), Postives = 420/836 (50.24%), Query Frame = 0
Query: 61 SLRNTKVLHANLLGATLLHSNIHVSNSLLDCYSKSNSIDNALKLFYTMLHPNVISWNIII 120
SL + LH+ +L L SN +S L D Y + A K+F M + +WN +I
Sbjct: 100 SLDEGRKLHSQILKLG-LDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 159
Query: 121 SCFNCNFLFLDSWRTFCRMHFLGFEPNEITYGSVLSACAAIQAPM-LGKQVYSLAIRNGF 180
L + + F RM PNE T+ VL AC + +Q+++ + G
Sbjct: 160 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 219
Query: 181 FVNGFVRAGMINLFARDSSFLDALRVFRDVDCENVVCWNAIVSAAVRNRENLMALDLFNT 240
+ V +I+L++R+ A RVF + ++ W A++S +N A+ LF
Sbjct: 220 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 279
Query: 241 MCSGFLEPNNFTFSSVLTACAALEDLEFGKRVQGRVIKCG-GEDVFVETALIDLYAKCGA 300
M + P + FSSVL+AC +E LE G+++ G V+K G D +V AL+ LY G
Sbjct: 280 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 339
Query: 301 MDEAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTA 360
+ A F MS R+ V++ +I+G Q A + F+ M G E +S T+ S++ A
Sbjct: 340 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 399
Query: 361 CGNPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLAS 420
C QLH++ K GF+S+ + AL+N+YAK I+ ++ F E +++ N+
Sbjct: 400 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVL 459
Query: 421 WTAMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVLSV---IDCITFGRQIHCYSL 480
W M+ ++ +D + +F++M E I P+ + S+L + + G QIH +
Sbjct: 460 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 519
Query: 481 KIGLIFDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMIA------------- 540
K + V S L MY+K G L+ A+ I KD VSW +MIA
Sbjct: 520 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 579
Query: 541 ---EMLFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTMYS 600
+ML D + + ++AC L +++ G++IH + +G DL +LVT+YS
Sbjct: 580 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 639
Query: 601 KCGNLEMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSISS 660
+CG +E + FE D+I ++LVSG+ Q +EAL +F + G+ + F+ S
Sbjct: 640 RCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGS 699
Query: 661 ILGAIALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGKPD 720
+ A + G Q+HA+I K + + V ++L+ MY+KCGSI D K F + +
Sbjct: 700 AVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN 759
Query: 721 LIGWTTMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFHLN 780
+ W +I +Y++HG G EAL ++ M ++P+ +T VGVLSACSH GLVD+ +
Sbjct: 760 EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFE 819
Query: 781 SMVKDYGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWDA--SCCL----- 840
SM +YG+ P HY C+VD+L R G L A+E I MPI+PDALVW S C+
Sbjct: 820 SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNM 879
Query: 841 --------KVMELKPSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWS 861
++EL+P D+ YV LSN+ A W+ R MK V K+PG S
Sbjct: 880 EIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 933
BLAST of Sed0013243 vs. TAIR 10
Match:
AT4G39530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 390.2 bits (1001), Expect = 4.3e-108
Identity = 241/718 (33.57%), Postives = 388/718 (54.04%), Query Frame = 0
Query: 189 MINLFARDSSFLDALRVFRDVDCENVVCWNAIVSA----AVRNRENLMALDLFNTMCSGF 248
+INL++R + A +VF + N+V W+ +VSA + ++ L+ + T
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD-- 144
Query: 249 LEPNNFTFSSVLTACAALED----LEFGKRVQGRVIKCG-GEDVFVETALIDLYAKCGAM 308
PN + SS + AC+ L+ + F ++Q ++K G DV+V T LID Y K G +
Sbjct: 145 -SPNEYILSSFIQACSGLDGRGRWMVF--QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNI 204
Query: 309 DEAVKTFLRMSVRNVVSWTAIISGFVQKNDNMMAFKFFEDMRKLGEEINSYTVTSVLTAC 368
D A F + ++ V+WT +ISG V+ + ++ + F + + + Y +++VL+AC
Sbjct: 205 DYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSAC 264
Query: 369 GNPAMTKEAIQLHSWILKAGFSSHAVVVAALINMYAKIGAIDRSMMVFREVDIQRNLASW 428
+ Q+H+ IL+ G A ++ LI+ Y K G + + +F + +N+ SW
Sbjct: 265 SILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISW 324
Query: 429 TAMITSFSQNNDGEEAGELFQKMLWESIRPDTFCTSSVL---SVIDCITFGRQIHCYSLK 488
T +++ + QN +EA ELF M ++PD + SS+L + + + FG Q+H Y++K
Sbjct: 325 TTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIK 384
Query: 489 IGLIFDVSVGSALFTMYSKCGYLEEAFQIFDNMPKKDNVSWASMI--------------- 548
L D V ++L MY+KC L +A ++FD D V + +MI
Sbjct: 385 ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEA 444
Query: 549 ----AEMLFEKYVPDPMTFSAVLTACYILHSIQIGKEIHGYSIRAGLGKDLAVGGSLVTM 608
+M F P +TF ++L A L S+ + K+IHG + GL D+ G +L+ +
Sbjct: 445 LNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDV 504
Query: 609 YSKCGNLEMARKVFETLPQKDHIVGSSLVSGYAQQKCIKEALLLFRDLLVAGLAIDPFSI 668
YS C L+ +R VF+ + KD ++ +S+ +GY QQ +EAL LF +L ++ D F+
Sbjct: 505 YSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 564
Query: 669 SSILGAIALLNQPGVGTQLHALIMKVSLEKDVSVGSSLVMMYSKCGSIEDCCKAFEHIGK 728
++++ A L +G + H ++K LE + + ++L+ MY+KCGS ED KAF+
Sbjct: 565 ANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAAS 624
Query: 729 PDLIGWTTMIVSYAQHGKGVEALCVYELMKKKGIKPDLITFVGVLSACSHNGLVDEAYFH 788
D++ W ++I SYA HG+G +AL + E M +GI+P+ ITFVGVLSACSH GLV++
Sbjct: 625 RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQ 684
Query: 789 LNSMVKDYGIQPGYRHYACMVDLLGRYGKLKEAEELINNMPIEPDALVWDA--SCCLKVM 848
M++ +GI+P HY CMV LLGR G+L +A ELI MP +P A+VW + S C K
Sbjct: 685 FELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 744
Query: 849 ELK-------------PSDTGAYVSLSNICADMGLWEEVLNVRSLMKGARVTKQPGWS 861
++ P D+G++ LSNI A G+W E VR MK V K+PG S
Sbjct: 745 NVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRS 795
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023519257.1 | 0.0e+00 | 81.86 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita ... | [more] |
XP_022923751.1 | 0.0e+00 | 81.52 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita ... | [more] |
XP_038893557.1 | 0.0e+00 | 81.75 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Benincasa ... | [more] |
XP_023001341.1 | 0.0e+00 | 81.19 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita ... | [more] |
XP_022137435.1 | 0.0e+00 | 80.40 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Momordica ... | [more] |
Match Name | E-value | Identity | Description | |
Q9CA56 | 1.1e-252 | 51.54 | Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidop... | [more] |
Q9FWA6 | 1.4e-119 | 33.93 | Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidop... | [more] |
Q9FIB2 | 3.3e-113 | 31.90 | Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th... | [more] |
Q9SVP7 | 2.2e-112 | 32.06 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... | [more] |
Q9SVA5 | 6.1e-107 | 33.57 | Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E7L2 | 0.0e+00 | 81.52 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Cucurbit... | [more] |
A0A6J1KIC5 | 0.0e+00 | 81.19 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Cucurbit... | [more] |
A0A6J1C6M8 | 0.0e+00 | 80.40 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Momordic... | [more] |
A0A1S3B4I2 | 0.0e+00 | 74.13 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Cucumis ... | [more] |
A0A5D3BIJ5 | 0.0e+00 | 74.05 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT1G74600.1 | 7.6e-254 | 51.54 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT3G02330.1 | 9.9e-121 | 33.93 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G09950.1 | 2.4e-114 | 31.90 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G13650.1 | 1.5e-113 | 32.06 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G39530.1 | 4.3e-108 | 33.57 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |