Sed0013242 (gene) Chayote v1

Overview


Name	Sed0013242
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG09: 39749444 .. 39759167 (-)
RNA-Seq Expression	Sed0013242
Synteny	Sed0013242

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGTTCCCTTTCAGCTCGGTTTTTATGACGATTCTCGTGTTCACCACGGTTCTATCTCCCACGACGATCTCCACCGTCGAGGCCACTCGTGAGCTTCTACAAGGTAAGACTTTGTTAAATCACCGTTAAACCAAAAAACTTACTGTTATGAAAATTATTCTTGATAATCTAAATGGTATAGTTCTTATTAAGTTGTAAGAAATGACTTGGGAGAATATATACTTAGTAAGTAAGATAGTTTTTTTTACGTTATGTTTGAATAACTATTTGTTTGTTGTTTTTGTTTTTTGAAATTTAAGCTTGTATTTACTCACGATTTCATCTTCCCATAAAATTGTAACCATATTCCATAAATTAAAATAAGTATTTGAAAATTATTTTTGTTAACTTTCAAATTTTGGTTTAGTTTTTAAAACGCAAACATGAAATGTAGATATATCATAGTAATGAAAACCACATGTGGTAGTAGTCGTTTTAGAATTATTATTTTTTAAATAATGATTAAACGAGGTCTACGTTTTTAATTTTTTAGCTTTTTTTTTATAAGTTCAACAACTATTACTCATAATCTCTTAATTTATGGACGCATATTATACCATTGAAATATTACACTGGTTGGGTAGCATTTCCATATTAGAATAATCCCTTAAGAAATATCACTCAACATATTTATGAATAAATTGATATTGCAAGTAACACGTTGATCATCTTATTTGATGTTAATATATTTTAGCTCTACGGTCATAAATTCGATCTTTGAAATCAGTATTTGGTCTTCTATGTAGAGTTTGTTGGACCTCTCCTCCAAATTTGTACTTTAAATTGATATAGCAAATGTTCAAACTCAAGATCTCTTTTGTTTATATTTCATTCATACACTACTAGAAATCTGACCTTCCATGACACCTTTTGTTTTTCATTCGGCAAGAAAGAGAAATAAAAAGAGTCATAATAGGTCAAAAGATGTGTTTTTCAATTTTTTTTAATTTATGATTATATTTTAGAGTCATGAAAAGTGCATTAGATTCTGTGTTCGAATCCGGGGAGACGTTGTTGTTTTCTAAATATTTAATTAGCTTAAAATAGTTATTAAAAAGTGAAAAAAAAAAAATCTTCCTAAACCTAATTGCACGCAATAAGGATACAGAAGGTGCTCACCTTGGAGAAACTTCAGAAATCCCAACTTGCGAGTTCTAAATTTCTAATCCTTCAACTCAATTTCTTCATCTCTTTCCTTCAATTCCACTTATCTCATGTTTCATCAATGGAATCATCCGCCTTCGTATTTCCCACCTCAACCCTCATTGTGAATCCTAACCCTTCTTCTTCTTTCCTGCCTTTTCCTCAGCCGATTTTCCCCTCGTCGTCGCCGCCTCCGATCCGGCCTTGCACCCTCCCAGAACCGACCTTATTTCAATTCCGCCTTTGTACCCTTGACTTATGTTAGATTGGAAGGGCAGACGCAACTTTATGTTGACCGATTCTTTCGCTTCGCATAATTGGGGCGTTTCACAGACCGACGTCGTTGGATTTGTAAGTGGGTTTTTTTTCATTCATTTTTTTAAAAAATTATTTATGATTGATGTATGTGTAATTATATGATTAAAAGATAGTCTGCAATTAGTTGGAATTTTTTTGTACTATAGTTATGAAACATGGGAATAATGGTCATGACCTAGTGATGAAAAAGGTGTTTATTATCTAAAAAGTGATCAATTCAATCTATGATGGTAAACTAACTAGGTATAAATTTTCCATAGTTTTCTTCACACTCAACCGTATGTCCCGTAACAATAGTTGAAGTTCGTGTTAGTTGAGCTAGACAGCCAGAGATATAAAAAATAAAAAAAAAGAAATATGGGAACGTTTGACACCAATTGTTTGTCAAAATTACAAGGGTGATGAAAAATGGGCATTTGTCTGTTTCAATTTCTCTTCGCAACTACAAAAGAAGTCAATGAGAAATCTCAATATCTCTTGGCAAATGGGCAATTCTCTTATTCACGAACTACATCGGAAAGGTGTGTTTCATTCCTTTAAGTCTTCATGGAATGTAGGTGTTTAATCTTTGGGGTTAAATCTGTTTAAAGAAACTGATAAGATCTACCACACTATTTTATTAATCTAAGATAAATCTCCCGAGAGGATCTCTCTAAGAGCCAGAGTACAAAATACGACTATTCAATGGATGCTTGACTATGACCTAACAACTCCTATTTATAGCCCTAAATCCTAATTTGACCTAATTAATAAAAGACTAATAATAGGCCCAAGCCCAATACATTTAAAATAGCAATTAACTACTAATTAATAAATACTAATATTCCTAAAATGCCAAGGACGGATCGTATCAATACTTTCCCCCCCAAGAGACACCTTGTCCTCAAGGTGTTCCATCTCCGATGCCATCTCTTCTGACCCCGTCTTACGGCAAAAATCTGTTCCATCAAAGCATCCGGCACTCGTGCGCATCATCGAACGACCCACACATCCAAGTTCGAGCTCCTTCTTCCGACAACGATGTCCTGGGAAAAATTGTTCATCTCAGCGGAAGCATAACCCTTTATCCTTCCGTGCTCGAATTTCGGCTTCAGTGAGTTTTTTATAGGACGTCGGTTGAATGGTTGTAGTCCTGTGAGAAAGAGTCGATGTGCTTCCAGTTCCCGAAACAATCATTCCTGCTTTAGCCTTGACCATTGTAGGAGTATTTCCCTCATTTTGGGTAGCTTGAAAAGCAAAATCATCCTCAATCACTTGGGCCATAAACATTTTCTCTTCGATGCCCACTGGCCGCAGTTTACGCATCGCGCTCTGTATCTCCTCTTTTAGTCCACTTTCCCACTTCCCCTCCAATGCACTCGCACTGATATCGCGCATTCCCTTAGCAAATCGCTCAAAACTCCGGCGATATTCCTTCACCGTACCTATTTGCTTCAAACTCATAAAGTTGGCATACTTATTTGCCTGAGTTGCCGGTTGGAAACGCTCCAACAACCCATCTTTGAATTCGTTCCAGGAACGAAAAGGAGCACGATCCTCCTCATACTGAAGCCACTCCAATGCCTCCCCTTCTAAACATAACCCTGCTGCCTCAACCCCTTCATATTCAGTCAGCTTGTTTACCAGAAAATAACGCTCGACCCGACTTAACCATCCCACCGGATCCTCGTCAGCAAGACCCTTGAAAACCGGCATCTCCAATTTCCTGAATCTCCTGTCACACCCCGGTCCCTCCTTTCCTCCTACTCTCTGACTTCCCCATTCGAGTCTTCCTTCTCCTCCCCACCCGAAATCTCGTCCCCTATTTCGGACATTGTCATTCCACCCCCTATTGTTCCAACCTTCATGCGCCAAGGACCTATCATAGCCCATGCGCAACCTCCTCTCCTCCAGAACCTTGTTTTCTCTCCCCACGACCCTTGGATCTCCCCTTTGGCCGAACTCCGGTCCCGGTAAATCGTCAACCCAATTTCGGCCTCGATCGTTCCAACTGTCATGCGCTATTGGTCCGCTCGCACCCAATGCGCACCCTCCTATCTTCTGGGAAACTGTTTCCCCTTCCGTCAACCCGTGGGTCCTCCCTTCGATCGATGTCCGGCCCCGGAAACCTTTCCCCGTCCCCAGGCCCTTGGAACCCCTCTCTCTGGTCCAACCCGACGAACCTGCATCGACCCGAACCGATCGGCCGGCCCGACCCGGTCCCCCTTGACCGCCGCCGTCGTGCCACCATTGCTGGCCCCGTGCCACACTCCCGCCCGCAACCGCCACGCCCCGCTCGCCTCGACCGCCGCGCGCCGGCCCCAGCACCACGCCATCCACGCGCCACGCCACGCCGAGCCAACGGCCACACTCGCCCTCGCTCGCCTCCGACCGAGCGCAGCCCACAACCTCCGTCTGCGCTGTGCGCCGAACCCGGCCCGCCCCCAACCCTCGCGTCCCCCCGCGCCCCAGCAACCCGCGCCGCTCGCGCTCGCGCCCCAGCCTGCGCGACCCGCCGCACCGTTTCCGCGAGAGCTCCAGCCCGCGCGCCCGCCCGAGCTTTCTCCTCCCTTCGCCAGGTCCGACTCCGCCACCGGCCGGACCCCAACAGCCCTCTCCGTCACCTTCCACGCGGCCCTGCTGCCGAACGGCCAGCCCCTAGCCTTCCGCGTCGTCCCCCCCCCGCGCCAGCCCGACCCGACGACGCTGCTTTGTCCCCTAGGGTTTTGCTCGCGGTTGCTTTTCCCTTGGCCACCGGGTTCAATTCGTTAACCGCGGCCCGGGATGCGTTCCATCAATATCTGGATATTCCGATTTATTTGTTCGATTTGCGAGTTAAATTTCGCATCTTGTTGTTCGAACCTTGCATCGATCTTTTGCCCCAATCGTTCTTCTAACGATTCCAGCTTCGCTTCCGTTTCCAACTGTTTCTTTGACAATTCGGCCGAGCTATCTTCCCAACTCTGCATCCTCGTTTCCATCTTAGTCGAAACCATTCCCGGATCGGTAAATGGCTCTGATACCAAAATGATAAGATCTACCACACTATTTTATTAATCTAAGATAAATCTCCCGAGAGGATCTCTCTAAAAGCCAGAGTACAAAATACGACTATTCAATGGATGCTTGACTATGACCTAACAACTCCTATTTATAGCCCTAAATCCTAATTTGACCTAATTAATAAAAGACTAATAATAGGCCCAAGCCCAATACATTTAAAATAGCAATTAACTACTAATTAATAAATACTAATATTCCTAAAATGCCAAGGACGGATCGTATCAGAAACCTACATATTTTAGATATATTTGAACTTTGAAAAATATTTTAGACATACATCAATAGCGGGGGATCCAACCGGAAAAGAAATCGTACAAATTCGTAAGAAAATTGATGCATTAAACAAGGATTTGAAGCCTCTAGGAATCACATTCCAAAAAAAGGTCATTTCTTTCCCTATGCTTTCTATACATTAGGATCACATTCCAAATAAAATAGTTATTAAACGAGGCCTATGTTAGTTGAAAGGCGTTTTCTCACCGAGTGGCTAGTATATGGAGGGGAAGTTCATAATATAACTTGATTTAGATTTATTTGTGAGTGGCGCTAGTGTACATAGCACAACAAAATAGAATAGTGTTAGAAAGAAGAGATATAGCTATTAAATTAGAAGAGTTTAAGCTTGGGTTCAGCTTAATAAGAGAGGGGTAGTTTGAGTGAAGTTGGAATGGAAAATGGAGACTTAAGGAGGTGGAGTTTGAGAGTGATTGAGAATGAATGTTTGTTAGTAAGTTTCATTCTTATTTGATGTTTGTTATGTTTCTTTTTTCTGAAAAGGTTCTCTTGCAGGCACTCCTCAAAGACAAACAATGGGGTGCTTAGTTTAATTGTCTTGCTTCACACACTGGTTTTGGGATCACAGTCTAGGGGAGGTAAATAAGAGACAATTTGTGTTTAATGGATTGTACTTGCTTTTGCAGTCGATGTATACGCGTTTAGAACCTTAAATTGCTTATAGGTCTTCGAATGTAAATATTTGTTGAAAATCTTAATTAAGCAGGATCCTGGGTGTTACACAATATCTTTTAAAATTTGATGTCAACGTATTTTATAACATTGTCTAACGGTTTGTTTATTCTTTCTAGATAAAGGGTTAACTCAGAGACCAACTTTGAAAAAGTAAGCTCGTTCTTGAATGCCATTAATTTCCTTTTGGGTTATATTTTTGTGGATGGATTCAAAGATGTTTGATGTTTAGTGTTAGCTATGATGTTGAATGTGAAAACTTATTATAAGTTGACGTTGTTTGCTCTTCAAGTACCCGAAGGTATGGAGTGGATTGTCTTTTCATAAAATATTATTTGAATGCATTTGCATTTCTTAGCCTTTTCTCGTTCACTTGGTGGTTCTTTTCCTATTGTTTAACTCAGCAGGTGGTTTGGCAATAGATTTTTTTCAATAGTTCTATTATTTATTTAGTATTTTCTTATTAAAAGAAGTTGTTGATGTTGAACCTGATTTAGATGTTGATGAGGAAATTATAAACTCTTTGCAGCTATTTTCATTTGTCAAGTTCTTGTTCTGTCAGGAATTTGTAATCCAAAATGTAGCTGTCATGGGTAGGTGGATAAAACTACATATGAGGAAAACTAAAAAATTATGTTTTTCTTGTGTTTTCTTTATTACAGTCTAAATTTCAAAGTTTATGTGCACATGCAAAGATAAAAAAAAACCATGTGATATGGAAATGCTTGTAGATGAGAGTTTTTTATGCCTTTAGTGTTATTTTCTTTCTCTTATCTACCTGTCCTATCTTGTTTTCAAATCTTTGAGAGAATTTGATGTTAGTGAGTAAAGAATTTGTTATGAAGTTCTTATTGGATTAGAAGGTTGTTGGTTGGTGTTCGTTGAACCCTTACATAAAGAATTAGTTCTTATTGGATTAGAAGGTTGTTTGTTGCCTATAAGGATGGGGTACATTAATTCGTCTTGCTGTAGATTTTCTTTTGTTTGAATGACTAAATCTTACTTTGATGTTCTTAATTTCCATCCTTAAGTATCACCGCAATTCCCAAGATTATAGAGTGGCTTGCTATATCATTTGTAGAAGTGAGTTGGAAAGATATCTATTTTGCTCGAAATATTTTTTCGTATACAAAATAAAATTGAAATTGGGATCCAATTCAAGATTGATTAGCCCAAAGTGATACTATTTTGATCCATATTGAGGATTTCATATTAGAAAGTGAGGAGACCTCCTAGCATTCATAAAATAGGTTGGTCACTCATCTCATCACCAATTTATTTTGAGATGGAACTCATTTTATCTAATAATTATATAATCTTTTTACTATCTGTTGAAAGGGTCAAATATTCTTTATTGATGTTTTAAATGATATATATATTTTTTTAATGTTCCTATCAGATTTTATTCTTTATTTAGGTTATGCAACTATGATTGACTGTAGGTTTGTGTATAAAATGTAGCAAAGCAACTTAAGAACTATTAAGCAAGGATAATATGGAGTATTTTGTTCCAACTTTAAGAAGTTTGCAAGAAAACGAGGAAAGGTATTGTTCTACCTTAGTCATAATGCTAAATTTTTGAAATACATATTTAGTGTTTTCCTTGCTATTGAAAATTTTGATTTAAAAAAATGACAGATTTGACAAATACTTAATGAAGGTGCTCTGTTTTCTTGTGATACAATGACAAATTTGATGCATCATTATTTATCAATAAATGCCCATACTTTTTTATCCAGTGGCAATCTGTCAAGTTTGTTGGTTTCAATGAACGCCTCTACTCAACAAGTTTGAGTAAGTTAGTCAATATTTATCTAAGTTACAAGTTTTAGATATCTTTTAAACTACTTTTAAATTTGGCCTTCAAACAGATTTTAAAAAGAGAACAAACATTGTTACAGATTTTTATACAGCTTCATCCATTTAGGATTCACCTTTTCGACCTATAAGGAGAACATATATAAATAGAACATATATCAATACCATTTTGATGTCTGAGTCATATTTCAGTCTTCACTTGACTTAGAATGACTTTAGGATCCTACGAGCTTTTCTATTCTTTAGGATTATTTGGATTTATTCTATTTTAGAATTTAAGAAGCTGCAATATATAAATTCTCATAATCTCTTTATGCCTTTAACCTTTTTATAATATATATTGCAACTTCTAATTCAAAGCTTTATTACTACATTGTGTAGGTATCTTATTTAAGGTAAGGATCGCTTGCATCTACAGTTATCGTGCAACTTGTCAATCCACGTATAATTCGCACAAGGCATAGCTGACCATGCTTCTTTGTTATATTGTAAACTTTATAGTTTTCAAACCCCTTGTAGACATTTTAAGAATTATAAATTTCTTGATTTTGATTTTTTTTTGTTCAAGTGTAATGTACAAATTATTATTATTATTTTTTTTGAAAGTAATGTACAAATTATTTAGTCATATATAAAATAATATTTGTTGAATAAGATTTTTGGGTTAACAAAAAAAAGTTGAAAATAAGCATAAAAAAGTGTCATGAAAACTAATAAATTGACATAAATAAATAGTCATATTATGTAAATTGATGACTATAAAAAAATGTCAATATATAAGCTATAATGACAATACTAACGTGTCGTTAATACTTCTTCAATGATTATATATGTGTCATTAATTATTCAACCATGATTAAAATAAAATGTCATAAATAGCTCAACTATGACAATGGATTAATTGTGACTATAATAAAATGTCATAATTAGTTTTACGATGACAGTTGTAAATTGTCGTTATTACTTCATCAATGACTTCGTATATGTGTCATTAATGGTTCATCTATGACTATAATATAGTGTCATAATTGATTCTACCATGACACTTTTACTATAGTGTCATGGTTTAACTTTCCGTGACAGCGGATACAATGACTCTTGATTTTAGTCATGGAAGGTGTTCATGACTATAAATTATAGTCAAGGAATGTGCTTTTTCTAGTAGTGATAATCATCAATTTTTATAATGATTGAGGAATTAAGAACTACTTAAGGCTTATTTGGCTCAACTGAAAAGGTTGGTGGCTAATAGGTTCATTGTTTGGTGGAAATCCACCTCAACACTGAGGTCACGAGTTCGATCTTAAAAATCGATATTTAGGCTCTAAAAAAGAATTCCTTAACAACTAAATGAATAGGCGATTGCCGTGTAAAAATAGTATATGATGATATTTTTTCATGTTATTATTTGGAACTTTTGAATTTGGTGATGCAGTTAGGAGGCCAATATGCCCAGCCTGCGTGTGCTGCGAGCCACCACCGCAGAGCTCGTGCTGTCGGTGCTGCGCGCTCTCCGATCGAATCTGCAACTCAGAAAGGGTCTCCATGAAAGCCTGTTGCTTGAGAAAGTAAGGGATTTGCAGAGATTGTGATTTGGGGAACAAGGAAGTAATTAAAGGCTCTCTATGCAAAATATATAACTTTATGTTTGGATGTTTGTTAATGAAATTGTGATGTTAAATAAGCCCATTTTGGTTTATCCATAATTAAATATGAGAGATCATTTGAACCAATTTCATGAATACACATTTATGCTCCTAAACTATTTTTCTCCTTCAAGTCATTTTGATATTCAAAGTCAATAAAATAAAATAAAATTAATATGTAGTTCTATCTTTTATTTTTGTATGCTTCTTTTATAGTTGGATGCAATTTCCAAATTATAGTCACTTTTACTATAGTGTCATGGTTTAACTTTCCGTGACAGCGGATACAATGACTCTTGATTTTAGTCATGGAAGGTGTTCATGACTATAAATTATAGTCAAGGAATGTGCTTTTTCTAGTAGTGATAATCATCAATTTTTATAATGATTGAGGAATTAAGAACTACTTAAGGCTTATTTGGCTCAACTGAAAAGGTTGGTGGCTAATAGGTTCATTGTTTGGTGGAAATCCACCTCAACACTGAGGTCACGAGTTCGATCTTAAAAATCGATATTTAGGCTCTAAAAAAGAATTCCTTAACAACTAAATGAATAGGCGATTGCCGTGTTAAAATAGTATATGATGATATTTTTTCATGTTATTATTTGGAACTTTTGAATTTGGTGATGCAGTTAGGAGGCCAATATGCCCAGCCTGCGTGTGCTGCGAGCCACCACCGGCAGGCTCGTGCTGTCGGTGCTGCGCTTCTCCGATCGAATCTGCAACTCAGAAAGGGTCTCCATGA

mRNA sequence

ATGGCAAAGTTCCCTTTCAGCTCGGTTTTTATGACGATTCTCGTGTTCACCACGGTTCTATCTCCCACGACGATCTCCACCGTCGAGGCCACTCGTGAGCTTCTACAAGTTAGGAGGCCAATATGCCCAGCCTGCGTGTGCTGCGAGCCACCACCGGCAGGCTCGTGCTGTCGGTGCTGCGCTTCTCCGATCGAATCTGCAACTCAGAAAGGGTCTCCATGA

Coding sequence (CDS)

ATGGCAAAGTTCCCTTTCAGCTCGGTTTTTATGACGATTCTCGTGTTCACCACGGTTCTATCTCCCACGACGATCTCCACCGTCGAGGCCACTCGTGAGCTTCTACAAGTTAGGAGGCCAATATGCCCAGCCTGCGTGTGCTGCGAGCCACCACCGGCAGGCTCGTGCTGTCGGTGCTGCGCTTCTCCGATCGAATCTGCAACTCAGAAAGGGTCTCCATGA

Protein sequence

MAKFPFSSVFMTILVFTTVLSPTTISTVEATRELLQVRRPICPACVCCEPPPAGSCCRCCASPIESATQKGSP

Homology

[Close]

BLAST of Sed0013242 vs. NCBI nr
Match: XP_038896231.1 (uncharacterized protein LOC120084509 [Benincasa hispida])

HSP 1 Score: 100.9 bits (250), Expect = 4.8e-18
Identity = 53/74 (71.62%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 2  AKFPFSSVFMTILVFTTVLSPTTISTVEATRELLQV--RRPICPACVCCEPPPAGSCCRC 61
          AKF  +SV MT+LVFT VLSP TI T  ATR LLQ   R PICPACVCCEP PAGSCCRC
Sbjct: 4  AKFSLTSVLMTVLVFTMVLSPMTIPTANATRVLLQQINRPPICPACVCCEPAPAGSCCRC 63

Query: 62 CASPIESATQKGSP 74
          CASPI++++Q GSP
Sbjct: 64 CASPIQTSSQNGSP 77

[Close]

BLAST of Sed0013242 vs. NCBI nr
Match: XP_022954010.1 (uncharacterized protein LOC111456398 [Cucurbita moschata])

HSP 1 Score: 100.9 bits (250), Expect = 4.8e-18
Identity = 52/73 (71.23%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3  KFPFSSVFMTILVFTTVLSPTTISTVEATRELLQV--RRPICPACVCCEPPPAGSCCRCC 62
          KF  +S+F+T+LVF  VLSPTTISTV ATR LLQ   R PICPACVCCEP PAGSCCRCC
Sbjct: 6  KFTPTSIFVTVLVFAMVLSPTTISTVNATRVLLQQVNRPPICPACVCCEPAPAGSCCRCC 65

Query: 63 ASPIESATQKGSP 74
          A+PI++++Q GSP
Sbjct: 66 ATPIQTSSQSGSP 78

[Close]

BLAST of Sed0013242 vs. NCBI nr
Match: KGN45568.1 (hypothetical protein Csa_016454 [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 8.1e-18
Identity = 51/73 (69.86%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 3  KFPFSSVFMTILVFTTVLSPTTISTVEATRELLQV--RRPICPACVCCEPPPAGSCCRCC 62
          K P +SVF+T+LVF  VLSP T  T  ATR LLQ   R PICPACVCCEPPPAGSCCRCC
Sbjct: 5  KLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSCCRCC 64

Query: 63 ASPIESATQKGSP 74
          ASPI++++Q GSP
Sbjct: 65 ASPIQTSSQNGSP 77

[Close]

BLAST of Sed0013242 vs. NCBI nr
Match: KAG6575497.1 (hypothetical protein SDJN03_26136, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.4 bits (246), Expect = 1.4e-17
Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 3  KFPFSSVFMTILVFTTVLSPTTISTVEATRELLQV--RRPICPACVCCEPPPAGSCCRCC 62
          KF  +S+F+T+LVF  VLSPTTIST  ATR LLQ   R PICPACVCCEP PAGSCCRCC
Sbjct: 6  KFTPTSIFVTVLVFAMVLSPTTISTANATRVLLQQVNRPPICPACVCCEPAPAGSCCRCC 65

Query: 63 ASPIESATQKGSP 74
          A+PI++++Q GSP
Sbjct: 66 ATPIQTSSQSGSP 78

[Close]

BLAST of Sed0013242 vs. NCBI nr
Match: KAA0059464.1 (hypothetical protein E6C27_scaffold242G001940 [Cucumis melo var. makuwa] >TYK03859.1 hypothetical protein E5676_scaffold347G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 3.1e-17
Identity = 51/73 (69.86%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 3  KFPFSSVFMTILVFTTVLSPTTISTVEATRELLQV--RRPICPACVCCEPPPAGSCCRCC 62
          K P +SVFMT+LVF  +LSP TI T  ATR LLQ   R PICPACVCCEP PAGSCCRCC
Sbjct: 5  KSPITSVFMTVLVFAMLLSPMTIPTATATRVLLQQLNRPPICPACVCCEPAPAGSCCRCC 64

Query: 63 ASPIESATQKGSP 74
          ASPI++++Q GSP
Sbjct: 65 ASPIQTSSQNGSP 77

[Close]

BLAST of Sed0013242 vs. ExPASy TrEMBL
Match: A0A6J1GR88 (uncharacterized protein LOC111456398 OS=Cucurbita moschata OX=3662 GN=LOC111456398 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.3e-18
Identity = 52/73 (71.23%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3  KFPFSSVFMTILVFTTVLSPTTISTVEATRELLQV--RRPICPACVCCEPPPAGSCCRCC 62
          KF  +S+F+T+LVF  VLSPTTISTV ATR LLQ   R PICPACVCCEP PAGSCCRCC
Sbjct: 6  KFTPTSIFVTVLVFAMVLSPTTISTVNATRVLLQQVNRPPICPACVCCEPAPAGSCCRCC 65

Query: 63 ASPIESATQKGSP 74
          A+PI++++Q GSP
Sbjct: 66 ATPIQTSSQSGSP 78

[Close]

BLAST of Sed0013242 vs. ExPASy TrEMBL
Match: A0A0A0K7Y9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452230 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.9e-18
Identity = 51/73 (69.86%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 3  KFPFSSVFMTILVFTTVLSPTTISTVEATRELLQV--RRPICPACVCCEPPPAGSCCRCC 62
          K P +SVF+T+LVF  VLSP T  T  ATR LLQ   R PICPACVCCEPPPAGSCCRCC
Sbjct: 5  KLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSCCRCC 64

Query: 63 ASPIESATQKGSP 74
          ASPI++++Q GSP
Sbjct: 65 ASPIQTSSQNGSP 77

[Close]

BLAST of Sed0013242 vs. ExPASy TrEMBL
Match: A0A5A7UWJ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00530 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-17
Identity = 51/73 (69.86%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 3  KFPFSSVFMTILVFTTVLSPTTISTVEATRELLQV--RRPICPACVCCEPPPAGSCCRCC 62
          K P +SVFMT+LVF  +LSP TI T  ATR LLQ   R PICPACVCCEP PAGSCCRCC
Sbjct: 5  KSPITSVFMTVLVFAMLLSPMTIPTATATRVLLQQLNRPPICPACVCCEPAPAGSCCRCC 64

Query: 63 ASPIESATQKGSP 74
          ASPI++++Q GSP
Sbjct: 65 ASPIQTSSQNGSP 77

[Close]

BLAST of Sed0013242 vs. ExPASy TrEMBL
Match: A0A6J1JPW7 (uncharacterized protein LOC111488758 OS=Cucurbita maxima OX=3661 GN=LOC111488758 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.3e-16
Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 8  SVFMTILVFTTVLSPTTISTVEATRELLQV--RRPICPACVCCEPPPAGSCCRCCASPIE 67
          S+F+T+LVF  VLSP TIST  ATR LLQ   R PICPACVCCEP PAGSCCRCCA+PI+
Sbjct: 11 SIFVTVLVFAMVLSPMTISTANATRALLQQVNRPPICPACVCCEPAPAGSCCRCCATPIQ 70

Query: 68 SATQKGSP 74
          +++Q GSP
Sbjct: 71 TSSQNGSP 78

[Close]

BLAST of Sed0013242 vs. ExPASy TrEMBL
Match: A0A6J1CSH3 (uncharacterized protein LOC111013890 OS=Momordica charantia OX=3673 GN=LOC111013890 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.2e-16
Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 3  KFPFSSVFMTILVFTTVLSPTTISTVEATRELLQVRR-PICPACVCCEPPPAGSCCR-CC 62
          KF  SS+F+T+LVFT VLSP  IST  ATR  LQVRR PICPACVCC+PPP GSCC+ CC
Sbjct: 9  KFSLSSIFVTVLVFTMVLSP-MISTAAATRLPLQVRRPPICPACVCCKPPPPGSCCKQCC 68

Query: 63 ASPIESATQKGSP 74
          A+PIE+++Q GSP
Sbjct: 69 ATPIETSSQNGSP 80

[Close]

BLAST of Sed0013242 vs. TAIR 10
Match: AT1G51920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 1.1e-09
Identity = 33/67 (49.25%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 6  FSSVFMTILVFTTVLSPTTISTVEATRELLQVRRPICPACVCCEPPPAGSCCRCCASPIE 65
          F  +F+  L+    LS +  + +   R  +  RRPICPACVCCEP P GSCCRCCASPI 
Sbjct: 11 FLKLFVLFLLLVLPLSQSNATRI--PRAPISSRRPICPACVCCEPAPLGSCCRCCASPIV 70

Query: 66 SATQKGS 73
          + T   S
Sbjct: 71 TQTHHHS 75

The following BLAST results are available for this feature:

BLAST of Sed0013242 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896231.1	4.8e-18	71.62	uncharacterized protein LOC120084509 [Benincasa hispida]	[more]
XP_022954010.1	4.8e-18	71.23	uncharacterized protein LOC111456398 [Cucurbita moschata]	[more]
KGN45568.1	8.1e-18	69.86	hypothetical protein Csa_016454 [Cucumis sativus]	[more]
KAG6575497.1	1.4e-17	69.86	hypothetical protein SDJN03_26136, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0059464.1	3.1e-17	69.86	hypothetical protein E6C27_scaffold242G001940 [Cucumis melo var. makuwa] >TYK038...	[more]

BLAST of Sed0013242 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0013242 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GR88	2.3e-18	71.23	uncharacterized protein LOC111456398 OS=Cucurbita moschata OX=3662 GN=LOC1114563...	[more]
A0A0A0K7Y9	3.9e-18	69.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452230 PE=4 SV=1	[more]
A0A5A7UWJ7	1.5e-17	69.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1JPW7	1.3e-16	70.59	uncharacterized protein LOC111488758 OS=Cucurbita maxima OX=3661 GN=LOC111488758...	[more]
A0A6J1CSH3	8.2e-16	69.86	uncharacterized protein LOC111013890 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Sed0013242 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51920.1	1.1e-09	49.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36328	TRANSMEMBRANE PROTEIN	coord: 1..73
None	No IPR available	PANTHER	PTHR36328:SF1	TRANSMEMBRANE PROTEIN	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013242.1	Sed0013242.1	mRNA