Sed0013208 (gene) Chayote v1

Overview


Name	Sed0013208
Type	gene
Organism	Sechium edule (Chayote v1)
Description	C2H2-type domain-containing protein
Location	LG01: 13117074 .. 13119922 (-)
RNA-Seq Expression	Sed0013208
Synteny	Sed0013208

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTACATGTGCTGAAGATGGTTGGAAGAAGTAAAGAGAGAAAGAAAGCTGGTATAAAGCTGGGATAGAAAAAAGCTGATATATGCAAAAAGCTGAAAATTTTAAAAGCCCATTAATTAATTTATAAAAACAAAAGCTGAAAGAAATAATAATAATAACCCCCAAAAAGCCATTGCCCCATTCTCTCTTTCTCTCTCTAGCCACACCTAATTTATCTTCAACCCAATTTCCAAAACTTTCAAATCCCCCCTTTCATTTTTCTTTCTCAAAGTTGACAAATTCTCTCTCTTTCTTTGAAGCTTTTTGTTTTTGTTTTTGTTTTTGTTTGTTTGTTTTTTAGTTTCTTTTCCCATGCTGGCTGATCTCTCTTCTCCTTCTCTTCCTTATTTTGATCCTTTGTCTAATTGCTTTGAAAACAATGAATCCAATAACAAAAGAAAAAGAAGACCTGCTGGAACTCCAGGTACATATAATTCAAGATTGATCATTTATTCTTTTCATCTTTTCCATTAGAATTGCTTCTAAAAGCAAGAGTCTTTGATTCAATTATGGACAATAATTCAATGAGTTTCTCGTGTCTTGATCAATTGAGTTATGCTTTACAGACCCAGATGCTGAAGTGGTCTCTCTCTCCCCAAAAACCCTATTGGAATCCGATCGCTACGTATGCGAGATCTGCAATCAAGGGTTTCAGAGAGATCAAAATCTACAAATGCATAGAAGACGACACAAGGTGCCGTGGAAGCTATTGAAGAGGACCGAGGCAGCCGCGACGGTGCGAAAGCGGGTGTTCGTTTGCCCCGAACCGACCTGCTTACACCACAACCCTACTCATGCTTTGGGGGATTTGGTGGGGATAAAGAAGCACTTTAGAAGAAAGCATAGTAACCATAAGCAATGGGTTTGTGAAAAATGCTCTAAAGGATATGCTGTTCAATCTGATTATAAAGCTCATCTCAAAACCTGTGGAACTCGAGGCCATTCATGCGATTGCGGTCGGGTTTTCTCCAGGTATATATTCTTTATCGACAATCAACATAACCTCTTCTTAAAGATTAAATTTACCCTAACTCATTCCTTAATTAAACTTTGAATTTAGTAGTAATTCGATATATAATATTCGAACAAAATTAAAAAAAAAAAAAAAAAAAGGTTTAGAGTTTAAGGTACAAACTTTGTTATGTTTTTTTTTTTCTTGTTTCATAATCTATGAGCTTACTGTCTTTTTCGGCGGCGATTACTTTCATATTTTGTTTTCTATTGATGGCTGCGGATTTTTCTGACTGTTATACACAAACATTCATCATCGAAAAACAACCCAAGTTTTTACTTGGTTTTTTTTTGTGTTGTAATTTGGCACATTTCCCGATGATCACCTCAAATGGTAGGTTTCAATTTCTTTTTCTTTTTTTTTGTTCAACCAGAATCAGTTTAAATTTTTGTCAGGACAAGGAATTCTTTTGTATTTTTACTTGCCTACTTTTTTTTTTTTTTGTTGGTCTCGTATACTAAATGAAAATGTAATGTCATACAATATTATCAATGTGGGACATTATTCGTATTCTTAAACAGTCTTTTGCCAAAAGTTGTCGAAAAAAATTAAACTTTTGATTATCGATTTTGGTTTTCTTAGCTTGGTTCATTAATCTTACCTTAATTCTCTCTTTTTTTTTCTTTTAAGAGAAAATAAAATAGGGTTTAATTTTAGACACTATTTCATTACTCCTATAGTTAGATGAATAAGAGAACATATCAACTTTTCTCATTCTATTAGCTTTCACAAATCTAAAACTTTTCAAATTTTCTCATTTTCTATATTCTTGTTTTTTAATCATGAGTTGTTTTTGTACCAACCTTATTTTGGGAAGATGTTATTTCTAATGCTCCTTTTTGGTTGTTTCGCTCTTACAATATTTCTACTACTACATTAAATTGAAGATCTTTCTTTTCTCTCTAGTTGTACTATGTAGGATCCTTTATCATAAGTTTTTTTTTTTTTAATTTTTTTCATTTAGGGTGGAGAGTTTCATAGAACATCAAGACACTTGCAAATTGGGTCATCATCAACAATTAGAAAAAATTCCATCTTTACAACCACCACCATGTTTATCAAGAACAGCTTCAAGTCCAACTCCAAGTCCTTCATCTGATAAAAACTTGAGCTTCTTAAATCAAAACCACAAATTTACTTCAACTCATGCAGACAAATCAGCAACAGCACCAACAACTCCCCAAAAAATAATCAGCCATCACCAAAATTTAGACCTTCAACTTTCCACCAATTCAACTTCCATTCATGTTTCAGTTTCTCCAAAAAGACATGAAAATTACTCAACCCATTTGCAGCTTTCAATTGGGTCTTGCAATTATGGTGAGAAAAGTGATCATTATAATGATGATGAGAAAATTGGAAGTAGATTGGGGTTTTTGAGGCTCAAAGAAGAAGCTAAAGAGCAAATGAAAGTGGCAATGGAAGAAAAGGAAATGGCTGAAGAAGCAAGAAATGAAGCAAAGAAGCAAATTGAAATGGCTGAAAAAGAATTAGCCAATGCTAAAAGAATGAGACAACAAGCTCAAGCTGAGTTACAAAGAGCTCTTGCTTTGAAAGAACAAGCCATCAAGAAAATCAACTCCACCATCCTCCAAATCACTTGCCAAGTTTGTAGGCAACATTTTCATCAATTGCCGAAAATTTGAATGCGTGATTATTGTTCTCGTTCATCGTCGTTTTTAACGAGACAAATTTTACGATTTATATACGAATAGGTTTGAATTGTGTTTTATCTGTTGTTCACCATTCTCACATTGTATCAAAGATGGATGTAATCAACAGAGAAAAGTATGCAGGAG

mRNA sequence

ACTACATGTGCTGAAGATGGTTGGAAGAAGTAAAGAGAGAAAGAAAGCTGGTATAAAGCTGGGATAGAAAAAAGCTGATATATGCAAAAAGCTGAAAATTTTAAAAGCCCATTAATTAATTTATAAAAACAAAAGCTGAAAGAAATAATAATAATAACCCCCAAAAAGCCATTGCCCCATTCTCTCTTTCTCTCTCTAGCCACACCTAATTTATCTTCAACCCAATTTCCAAAACTTTCAAATCCCCCCTTTCATTTTTCTTTCTCAAAGTTGACAAATTCTCTCTCTTTCTTTGAAGCTTTTTGTTTTTGTTTTTGTTTTTGTTTGTTTGTTTTTTAGTTTCTTTTCCCATGCTGGCTGATCTCTCTTCTCCTTCTCTTCCTTATTTTGATCCTTTGTCTAATTGCTTTGAAAACAATGAATCCAATAACAAAAGAAAAAGAAGACCTGCTGGAACTCCAGACCCAGATGCTGAAGTGGTCTCTCTCTCCCCAAAAACCCTATTGGAATCCGATCGCTACGTATGCGAGATCTGCAATCAAGGGTTTCAGAGAGATCAAAATCTACAAATGCATAGAAGACGACACAAGGTGCCGTGGAAGCTATTGAAGAGGACCGAGGCAGCCGCGACGGTGCGAAAGCGGGTGTTCGTTTGCCCCGAACCGACCTGCTTACACCACAACCCTACTCATGCTTTGGGGGATTTGGTGGGGATAAAGAAGCACTTTAGAAGAAAGCATAGTAACCATAAGCAATGGGTTTGTGAAAAATGCTCTAAAGGATATGCTGTTCAATCTGATTATAAAGCTCATCTCAAAACCTGTGGAACTCGAGGCCATTCATGCGATTGCGGTCGGGTTTTCTCCAGGGTGGAGAGTTTCATAGAACATCAAGACACTTGCAAATTGGGTCATCATCAACAATTAGAAAAAATTCCATCTTTACAACCACCACCATGTTTATCAAGAACAGCTTCAAGTCCAACTCCAAGTCCTTCATCTGATAAAAACTTGAGCTTCTTAAATCAAAACCACAAATTTACTTCAACTCATGCAGACAAATCAGCAACAGCACCAACAACTCCCCAAAAAATAATCAGCCATCACCAAAATTTAGACCTTCAACTTTCCACCAATTCAACTTCCATTCATGTTTCAGTTTCTCCAAAAAGACATGAAAATTACTCAACCCATTTGCAGCTTTCAATTGGGTCTTGCAATTATGGTGAGAAAAGTGATCATTATAATGATGATGAGAAAATTGGAAGTAGATTGGGGTTTTTGAGGCTCAAAGAAGAAGCTAAAGAGCAAATGAAAGTGGCAATGGAAGAAAAGGAAATGGCTGAAGAAGCAAGAAATGAAGCAAAGAAGCAAATTGAAATGGCTGAAAAAGAATTAGCCAATGCTAAAAGAATGAGACAACAAGCTCAAGCTGAGTTACAAAGAGCTCTTGCTTTGAAAGAACAAGCCATCAAGAAAATCAACTCCACCATCCTCCAAATCACTTGCCAAGTTTGTAGGCAACATTTTCATCAATTGCCGAAAATTTGAATGCGTGATTATTGTTCTCGTTCATCGTCGTTTTTAACGAGACAAATTTTACGATTTATATACGAATAGGTTTGAATTGTGTTTTATCTGTTGTTCACCATTCTCACATTGTATCAAAGATGGATGTAATCAACAGAGAAAAGTATGCAGGAG

Coding sequence (CDS)

ATGCTGGCTGATCTCTCTTCTCCTTCTCTTCCTTATTTTGATCCTTTGTCTAATTGCTTTGAAAACAATGAATCCAATAACAAAAGAAAAAGAAGACCTGCTGGAACTCCAGACCCAGATGCTGAAGTGGTCTCTCTCTCCCCAAAAACCCTATTGGAATCCGATCGCTACGTATGCGAGATCTGCAATCAAGGGTTTCAGAGAGATCAAAATCTACAAATGCATAGAAGACGACACAAGGTGCCGTGGAAGCTATTGAAGAGGACCGAGGCAGCCGCGACGGTGCGAAAGCGGGTGTTCGTTTGCCCCGAACCGACCTGCTTACACCACAACCCTACTCATGCTTTGGGGGATTTGGTGGGGATAAAGAAGCACTTTAGAAGAAAGCATAGTAACCATAAGCAATGGGTTTGTGAAAAATGCTCTAAAGGATATGCTGTTCAATCTGATTATAAAGCTCATCTCAAAACCTGTGGAACTCGAGGCCATTCATGCGATTGCGGTCGGGTTTTCTCCAGGGTGGAGAGTTTCATAGAACATCAAGACACTTGCAAATTGGGTCATCATCAACAATTAGAAAAAATTCCATCTTTACAACCACCACCATGTTTATCAAGAACAGCTTCAAGTCCAACTCCAAGTCCTTCATCTGATAAAAACTTGAGCTTCTTAAATCAAAACCACAAATTTACTTCAACTCATGCAGACAAATCAGCAACAGCACCAACAACTCCCCAAAAAATAATCAGCCATCACCAAAATTTAGACCTTCAACTTTCCACCAATTCAACTTCCATTCATGTTTCAGTTTCTCCAAAAAGACATGAAAATTACTCAACCCATTTGCAGCTTTCAATTGGGTCTTGCAATTATGGTGAGAAAAGTGATCATTATAATGATGATGAGAAAATTGGAAGTAGATTGGGGTTTTTGAGGCTCAAAGAAGAAGCTAAAGAGCAAATGAAAGTGGCAATGGAAGAAAAGGAAATGGCTGAAGAAGCAAGAAATGAAGCAAAGAAGCAAATTGAAATGGCTGAAAAAGAATTAGCCAATGCTAAAAGAATGAGACAACAAGCTCAAGCTGAGTTACAAAGAGCTCTTGCTTTGAAAGAACAAGCCATCAAGAAAATCAACTCCACCATCCTCCAAATCACTTGCCAAGTTTGTAGGCAACATTTTCATCAATTGCCGAAAATTTGA

Protein sequence

MLADLSSPSLPYFDPLSNCFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTCKLGHHQQLEKIPSLQPPPCLSRTASSPTPSPSSDKNLSFLNQNHKFTSTHADKSATAPTTPQKIISHHQNLDLQLSTNSTSIHVSVSPKRHENYSTHLQLSIGSCNYGEKSDHYNDDEKIGSRLGFLRLKEEAKEQMKVAMEEKEMAEEARNEAKKQIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQHFHQLPKI

Homology

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BLAST of Sed0013208 vs. NCBI nr
Match: XP_038895030.1 (zinc finger protein SHOOT GRAVITROPISM 5-like [Benincasa hispida])

HSP 1 Score: 663.3 bits (1710), Expect = 1.3e-186
Identity = 347/410 (84.63%), Postives = 365/410 (89.02%), Query Frame = 0


Query: 1   MLADLSSPSLPYFDPLSNCFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           MLADLSSPSLP F+PLSNCFENN +NNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE
Sbjct: 1   MLADLSSPSLPCFEPLSNCFENNGTNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLV 120
           ICNQGFQRDQNLQMHRRRHKVPWKLLKRTE    VRKRVFVCPEP+CLHHNPTHALGDLV
Sbjct: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTETTTVVRKRVFVCPEPSCLHHNPTHALGDLV 120

Query: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180
           GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180

Query: 181 QDTCKLGHHQQLEKIPSLQPPPCLSRTASSPTPSPSSDKNLSFLNQNHKFTST------H 240
           QD CKLGHHQQ     S Q  PCLSRTASSPTPSPSSD N SFLNQN  FT+T       
Sbjct: 181 QDNCKLGHHQQ----QSEQKIPCLSRTASSPTPSPSSDTNFSFLNQNQTFTTTIDHHHHG 240

Query: 241 ADKSATAPT-TPQKII--SHHQNLDLQLSTNSTSIHVSVSPKRHENYSTHLQLSIGSCNY 300
           A+K +T  T  PQ+ I  +HHQNLDLQLSTNSTSIHVSVSPKRHENYSTHLQLSIGSCNY
Sbjct: 241 AEKYSTKTTIIPQRSINHNHHQNLDLQLSTNSTSIHVSVSPKRHENYSTHLQLSIGSCNY 300

Query: 301 GEKSD--HYNDDEKIGSRLGFLRLKEEAKEQMKVAMEEKEMAEEARNEAKKQIEMAEKEL 360
           GEK++  + N+++    +LGFLRLKEEAKEQM+VAMEEK +AEEARNEAKKQIE+AEKEL
Sbjct: 301 GEKNEDNNSNNNDDDDEKLGFLRLKEEAKEQMRVAMEEKAVAEEARNEAKKQIELAEKEL 360

Query: 361 ANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQHFHQLPKI 400
            NAKRMRQQAQAELQRALALKE AIKKINSTILQITCQVCRQHFH LPKI
Sbjct: 361 VNAKRMRQQAQAELQRALALKEHAIKKINSTILQITCQVCRQHFHPLPKI 406

[Close]

BLAST of Sed0013208 vs. NCBI nr
Match: XP_011650944.1 (zinc finger protein SHOOT GRAVITROPISM 5 [Cucumis sativus] >KGN64198.1 hypothetical protein Csa_014288 [Cucumis sativus])

HSP 1 Score: 659.4 bits (1700), Expect = 1.9e-185
Identity = 352/427 (82.44%), Postives = 365/427 (85.48%), Query Frame = 0


Query: 1   MLADLSSPSLPYFDPLSNCFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           MLADLSSPSLP F+PLSNCFENN +NNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE
Sbjct: 1   MLADLSSPSLPCFEPLSNCFENNGTNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLV 120
           ICNQGFQRDQNLQMHRRRHKVPWKLLKRTE    VRKRVFVCPEP+CLHHNPTHALGDLV
Sbjct: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTETTTVVRKRVFVCPEPSCLHHNPTHALGDLV 120

Query: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180
           GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180

Query: 181 QDTCKLGHHQQLEKIPSLQPPPCLSRTASSPTPSPSSDKNLSFLNQNH----KFTSTH-- 240
           QD CKLGHH Q ++  S Q  PCLSRTASSPTPSPSSD N SFLNQN     KFTSTH  
Sbjct: 181 QDNCKLGHHHQQQQ--SEQKIPCLSRTASSPTPSPSSDTNFSFLNQNQNQNPKFTSTHHH 240

Query: 241 -----ADKSATAPT-TPQKIISH-HQNLDLQLSTNS-TSIHVSVSPKRHENYSTHLQLSI 300
                ADK +   T  PQ+II H HQNLDLQLSTNS TSIHVSVSPKRHENYSTHLQLSI
Sbjct: 241 HHNHGADKYSKKTTIIPQRIIGHNHQNLDLQLSTNSTTSIHVSVSPKRHENYSTHLQLSI 300

Query: 301 GSCNYGEK--------------SDHYNDDEKIGSRLGFLRLKEEAKEQMKVAMEEKEMAE 360
           GSCNYGEK               DH+NDD+    +LGFL+LKEEAKEQM++AMEEK MAE
Sbjct: 301 GSCNYGEKLHDHHHDNNNNSNDRDHHNDDDD-DEKLGFLKLKEEAKEQMRMAMEEKAMAE 360

Query: 361 EARNEAKKQIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQH 400
           EARNEAKKQIEMAEKEL NAKRMRQQAQAELQRAL LKE AIKKINSTILQITCQVCRQH
Sbjct: 361 EARNEAKKQIEMAEKELVNAKRMRQQAQAELQRALVLKEHAIKKINSTILQITCQVCRQH 420

[Close]

BLAST of Sed0013208 vs. NCBI nr
Match: XP_008467125.1 (PREDICTED: protein SHOOT GRAVITROPISM 5-like [Cucumis melo])

HSP 1 Score: 658.3 bits (1697), Expect = 4.2e-185
Identity = 349/426 (81.92%), Postives = 364/426 (85.45%), Query Frame = 0


Query: 1   MLADLSSPSLPYFDPLSNCFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           MLADLSSPSLP F+PLSNCFENN +NNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE
Sbjct: 1   MLADLSSPSLPCFEPLSNCFENNGTNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLV 120
           ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEA   VRKRVFVCPEP+CLHHNPTHALGDLV
Sbjct: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEATTVVRKRVFVCPEPSCLHHNPTHALGDLV 120

Query: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180
           GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180

Query: 181 QDTCKLGHHQQLEKIPSLQPPPCLSRTASSPTPSPSSDKNLSFLNQNH------KFTSTH 240
           QD CKLGHH   ++  S Q  PCLSRTASSPTPSPSSD N SFLNQN       KFTSTH
Sbjct: 181 QDNCKLGHHHHHQQQQSDQKIPCLSRTASSPTPSPSSDTNFSFLNQNQNQNQNPKFTSTH 240

Query: 241 -----ADKSATAPT-TPQKIISH-HQNLDLQLSTNS-TSIHVSVSPKRHENYSTHLQLSI 300
                ADK +   T  PQ+II H HQNLDLQLSTNS TSIHVSVSPKRHENYSTHLQLSI
Sbjct: 241 HHNHGADKYSKKTTIIPQRIIGHNHQNLDLQLSTNSTTSIHVSVSPKRHENYSTHLQLSI 300

Query: 301 GSCNYGEK-------------SDHYNDDEKIGSRLGFLRLKEEAKEQMKVAMEEKEMAEE 360
           GSCNYGEK             +DH ++D+    +LG L+LKEEAKEQM++AMEEK MAEE
Sbjct: 301 GSCNYGEKLHDHHDNNNNNNSNDHDHNDDDNDEKLGLLKLKEEAKEQMRMAMEEKAMAEE 360

Query: 361 ARNEAKKQIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQHF 400
           ARNEAKKQIEMAEKEL NAKRMRQQAQAELQRAL LKE AIKKINSTILQITCQVCRQHF
Sbjct: 361 ARNEAKKQIEMAEKELVNAKRMRQQAQAELQRALVLKEHAIKKINSTILQITCQVCRQHF 420

[Close]

BLAST of Sed0013208 vs. NCBI nr
Match: KAG6572982.1 (Zinc finger protein SHOOT GRAVITROPISM 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 630.6 bits (1625), Expect = 9.5e-177
Identity = 330/412 (80.10%), Postives = 351/412 (85.19%), Query Frame = 0


Query: 1   MLADLSSPSLPYFDPLSNCFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           M+ADLSS      DPLSNCF NN +N+KRKRRPAGTPDPDAEVVSLSPKTLLESD Y+CE
Sbjct: 1   MVADLSS-----LDPLSNCFHNNGTNSKRKRRPAGTPDPDAEVVSLSPKTLLESDSYICE 60

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLV 120
           IC+QGFQRDQNLQMHRRRHKVPWKLLKRTE   T RKRVFVCPEP+CLHHNPTHALGDLV
Sbjct: 61  ICHQGFQRDQNLQMHRRRHKVPWKLLKRTETTTTTRKRVFVCPEPSCLHHNPTHALGDLV 120

Query: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180
           GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180

Query: 181 QDTCKLGHHQQLEKIPSLQ---------PPPCLSRTASSPTPSPSSDKNLSFLNQNHKFT 240
           QD+CKLGHHQQ EK  SLQ         PPPCLSRTASSPTP+PSSD N SFLNQ H   
Sbjct: 181 QDSCKLGHHQQPEKEASLQPPPPPPPPPPPPCLSRTASSPTPTPSSDTNFSFLNQTH--- 240

Query: 241 STHADKSATAPTTPQKIISHHQNLDLQLSTNSTSIHVSVSPKRHENYSTHLQLSIGSCNY 300
                     P TPQK+I+HHQNLDLQLST+S SI VSVSPK+HENYST LQLSIGSCNY
Sbjct: 241 ---------TPKTPQKLITHHQNLDLQLSTSSNSIKVSVSPKKHENYSTQLQLSIGSCNY 300

Query: 301 GEKS---DHY--NDDEKIGSRLGFLRLKEEAKEQMKVAMEEKEMAEEARNEAKKQIEMAE 360
           G+K+   DHY  N DE+IG+ L  L+LKEEA E+M+VA EEK +AEEARNEAKKQIE+AE
Sbjct: 301 GDKNEQKDHYQMNFDEQIGNGLNLLKLKEEAIERMRVAREEKAVAEEARNEAKKQIELAE 360

Query: 361 KELANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQHFHQLPK 399
           KELANAKRMRQQAQAELQRALALKE AI KINSTILQITCQVCRQHFH L K
Sbjct: 361 KELANAKRMRQQAQAELQRALALKEHAINKINSTILQITCQVCRQHFHPLHK 395

[Close]

BLAST of Sed0013208 vs. NCBI nr
Match: XP_022924154.1 (protein SHOOT GRAVITROPISM 5-like [Cucurbita moschata] >XP_022924155.1 protein SHOOT GRAVITROPISM 5-like [Cucurbita moschata])

HSP 1 Score: 629.4 bits (1622), Expect = 2.1e-176
Identity = 327/402 (81.34%), Postives = 347/402 (86.32%), Query Frame = 0


Query: 1   MLADLSSPSLPYFDPLSNCFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           MLADLSSPSLP F+PL NCFE+N +N KRKRRPAGTPDPDAEVVSLSPKTLLESD YVCE
Sbjct: 1   MLADLSSPSLPCFEPLPNCFESNGTNTKRKRRPAGTPDPDAEVVSLSPKTLLESDHYVCE 60

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLV 120
           ICNQGFQRDQNLQMHRRRHKVPWKLLKRTE    VRKRVFVCPEP+CLHHNPTHALGDLV
Sbjct: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEPTTAVRKRVFVCPEPSCLHHNPTHALGDLV 120

Query: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180
           GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180

Query: 181 QDTCKLGHHQQLEKIPSLQPPPCLSRTASSPTPSPSSDKNLSFLNQNHKFTSTHADKSAT 240
           QD+CKLGHH Q     S Q  PCLSRTASSPTPSPSSD N SF N+NH            
Sbjct: 181 QDSCKLGHHHQ----QSEQKLPCLSRTASSPTPSPSSDTNFSFFNKNHTI---------- 240

Query: 241 APTTPQKIISHH-QNLDLQLSTNSTSIHVSVSPKRHENYSTHLQLSIGSCNYGEKSDHYN 300
               PQ+II+HH QNL+LQLS NSTSIHVSVSPKRHENYSTHLQLSIGSCNY EK+D  +
Sbjct: 241 ---IPQRIITHHPQNLELQLSNNSTSIHVSVSPKRHENYSTHLQLSIGSCNYDEKNDDGD 300

Query: 301 D--DEKIGSRLGFLRLKEEAKEQMKVAMEEKEMAEEARNEAKKQIEMAEKELANAKRMRQ 360
           D  DEK  + L FL++KEEAKEQM+VAMEEK +AEEARNEAKKQIE+AEKELANAKRMRQ
Sbjct: 301 DDHDEKTRNGLDFLKVKEEAKEQMRVAMEEKAIAEEARNEAKKQIEIAEKELANAKRMRQ 360

Query: 361 QAQAELQRALALKEQAIKKINSTILQITCQVCRQHFHQLPKI 400
           +AQ ELQRALALKE A+K+INSTILQITCQVCRQHF   P I
Sbjct: 361 EAQGELQRALALKEHAMKQINSTILQITCQVCRQHFEPFPTI 385

[Close]

BLAST of Sed0013208 vs. ExPASy Swiss-Prot
Match: F4IPE3 (Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5 PE=1 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 2.7e-110
Identity = 243/422 (57.58%), Postives = 287/422 (68.01%), Query Frame = 0


Query: 6   SSPSLPYFDPLSN-CFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQ 65
           SS S P+     N     N S  KRKRRPAGTPDPDAEVVSLSP+TLLESDRY+CEICNQ
Sbjct: 21  SSSSDPFLSSSENGVTTTNTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQ 80

Query: 66  GFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLVGIKK 125
           GFQRDQNLQMHRRRHKVPWKLLKR +    V+KRV+VCPEPTCLHHNP HALGDLVGIKK
Sbjct: 81  GFQRDQNLQMHRRRHKVPWKLLKR-DNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKK 140

Query: 126 HFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 185
           HFRRKHSNHKQWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD C
Sbjct: 141 HFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNC 200

Query: 186 KLGH-HQQLEKIP--SLQPPPCLSRTASSPTPSPSSDKNLSFLNQNHKFTSTHADKSATA 245
                H++  + P  ++  P C SRTAS+   +PSS+ N                    A
Sbjct: 201 SARRVHREPPRPPQTAVTVPACSSRTAST-VSTPSSETNYG---------------GTVA 260

Query: 246 PTTPQKI----------------ISHHQNLDLQLSTNSTSIHVS--------VSPKRHEN 305
            TTPQ +                 S++ NL+LQL   S++ + +          P  H N
Sbjct: 261 VTTPQPLEGRPIHQRISSSILTNSSNNLNLELQLLPLSSNQNPNQENQQQKVKEPSHHHN 320

Query: 306 Y---STHLQLSIG-SCNYGEKSDHYNDDEKIGSRLGFLRLKE-EAKEQ-MKVAMEEKEMA 365
           +   +T+L LSI  S +Y     HYN+         F R+KE  A EQ MK+AM+EK  A
Sbjct: 321 HNHDTTNLNLSIAPSSSY----QHYNN---------FDRIKEIMASEQIMKIAMKEKAYA 380

Query: 366 EEARNEAKKQIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQ 394
           EEA+ EAK+Q E+AE E ANAK++RQ+AQAEL+RA  LKEQ++KKI+STI+Q+TCQ C+ 
Sbjct: 381 EEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCKG 412

[Close]

BLAST of Sed0013208 vs. ExPASy Swiss-Prot
Match: Q9C9X7 (Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.7e-99
Identity = 209/368 (56.79%), Postives = 253/368 (68.75%), Query Frame = 0


Query: 28  KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 87
           KRKRRPAGTPDP+AEVVSLSP+TLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK
Sbjct: 41  KRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 100

Query: 88  RTEAAATVRKRVFVCPEPTCLHHNPTHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAV 147
           R E    VRKRV+VCPEPTCLHHNP HALGDLVGIKKHFRRKHSNHKQW+CE+CSKGYAV
Sbjct: 101 R-ETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERCSKGYAV 160

Query: 148 QSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTCKLGHHQQLEK--IPSLQPPPCLS 207
           QSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC +   Q          Q     +
Sbjct: 161 QSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTCTVRRSQPSNHRLHEQQQHTTNAT 220

Query: 208 RTASSPTPSPSSDKNLSFLNQNHKFTSTHADKSATAPTTPQKIISHHQNLDLQLSTNSTS 267
           +TAS+   + + D ++  +   H      +  S   P+T          L     TN  S
Sbjct: 221 QTASTAENNENGDLSIGPILPGHPLQRRQSPPSEQQPST----------LLYPFVTNG-S 280

Query: 268 IHVSVSPKRHENYSTHLQLSIGSCNYGEKSDHYNDDEKIGSRLGFLRLKEEAKEQMKVAM 327
           I + + P R+    T L LSIG+            D+K  S      +++++ E+ + ++
Sbjct: 281 IELQLLPSRNCADETSLSLSIGTM-----------DQKTMS-----EVEKKSYEKGETSL 340

Query: 328 EEKEMAEEARNEAKKQIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQIT 387
           E     EEAR E K+QIE+AE E A AKR+RQ A+AEL +A   +E+A ++I++T++QIT
Sbjct: 341 ER----EEARRETKRQIEIAELEFAEAKRIRQHARAELHKAHLFREEASRRISATMMQIT 376

Query: 388 CQVCRQHF 394
           C  C+QHF
Sbjct: 401 CHNCKQHF 376

[Close]

BLAST of Sed0013208 vs. ExPASy Swiss-Prot
Match: Q9FRH4 (Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 4.4e-92
Identity = 200/366 (54.64%), Postives = 236/366 (64.48%), Query Frame = 0


Query: 38  DPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRK 97
           DPDAEVVSLSP+TLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKR +    VRK
Sbjct: 20  DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRK 79

Query: 98  RVFVCPEPTCLHHNPTHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT 157
           RV+VCPEPTCLHH+P HALGDLVGIKKHFRRKHS HKQWVCE+CSKGYAVQSDYKAHLKT
Sbjct: 80  RVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKT 139

Query: 158 CGTRGHSCDCGRVFSRVESFIEHQDTCKL------GHHQQLEKIPSLQPPPCLSRTASSP 217
           CG+RGHSCDCGRVFSRVESFIEHQDTC +       H    +    L  P   SRT S+ 
Sbjct: 140 CGSRGHSCDCGRVFSRVESFIEHQDTCTIRQPQPTNHRHLQQHTMGLDAP---SRTTSTA 199

Query: 218 TPSPSSDKNLSFLNQNHKFTSTHADKSATAPTTPQKIISHHQNLDLQLSTNSTSIHVSVS 277
           +  P     L  L                    P+    H        + +S        
Sbjct: 200 SFGPLL-HGLPLLR------------------PPRPSNQHSPAFAYPFNASSAPFE---- 259

Query: 278 PKRHENYSTHLQLSIGSCNYGEKSDHYNDDEKIGSRLGFLRLKEEAKEQMKVAMEEKEMA 337
                  S  LQLSIG      ++ H   +EK  + L   R  EEA++           A
Sbjct: 260 -------SLELQLSIGMARTSAQARH---NEKRETSLTKERANEEARK-----------A 319

Query: 338 EEARNEAKKQIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQ 397
           EE R EAK+QIEMAEK+   AKR+R++A+ EL++A  ++E+AIK+IN+T+++ITC  C+Q
Sbjct: 320 EETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKAHVVREEAIKRINATMMEITCHSCKQ 337

[Close]

BLAST of Sed0013208 vs. ExPASy Swiss-Prot
Match: Q9SCQ6 (Zinc finger protein GAI-ASSOCIATED FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=GAF1 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.4e-58
Identity = 124/254 (48.82%), Postives = 164/254 (64.57%), Query Frame = 0


Query: 3   ADLSSPSLPYFDPLSNCFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC 62
           A +S  S    +PL N      S  K+KR   G PDP++EV++LSPKTLL ++R+VCEIC
Sbjct: 15  ASVSISSTGNQNPLPN------STGKKKRNLPGMPDPESEVIALSPKTLLATNRFVCEIC 74

Query: 63  NQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLVGI 122
           N+GFQRDQNLQ+HRR H +PWKL  R ++   V+K+V+VCPE +C+HH+P+ ALGDL GI
Sbjct: 75  NKGFQRDQNLQLHRRGHNLPWKL--RQKSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGI 134

Query: 123 KKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 182
           KKHF RKH   K+W C+KCSK YAVQSD+KAH K CGT+ + CDCG +FSR +SFI H+ 
Sbjct: 135 KKHFCRKH-GEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRA 194

Query: 183 TCKL-------GHHQQLEKIPSLQPPPCLSRTASSPTPSPSSDKNLSFLNQNHKFTSTHA 242
            C          HH Q +K    Q P  L+R    P P P+    +   +   K +ST  
Sbjct: 195 FCDALAEENARSHHSQSKK----QNPEILTRKNPVPNPVPAP---VDTESAKIKSSSTLT 252

Query: 243 DKSATAPTTPQKII 250
            K + +P TP +I+
Sbjct: 255 IKQSESPKTPPEIV 252

[Close]

BLAST of Sed0013208 vs. ExPASy Swiss-Prot
Match: Q700D2 (Zinc finger protein JACKDAW OS=Arabidopsis thaliana OX=3702 GN=JKD PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-57
Identity = 104/178 (58.43%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 10  LPYFDPLSNCFEN---NESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGF 69
           +P  +P SN   N   N S+ K+KR   GTPDPDA+V++LSP TL+ ++R+VCEICN+GF
Sbjct: 32  IPDLNPNSNPNPNAKPNSSSAKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGF 91

Query: 70  QRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLVGIKKHF 129
           QRDQNLQ+HRR H +PWKL +R++    ++K+V++CP  TC+HH+ + ALGDL GIKKH+
Sbjct: 92  QRDQNLQLHRRGHNLPWKLKQRSK-QEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHY 151

Query: 130 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 185
            RKH   K+W CEKCSK YAVQSD+KAH KTCGTR + CDCG +FSR +SFI H+  C
Sbjct: 152 SRKH-GEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFC 207

[Close]

BLAST of Sed0013208 vs. ExPASy TrEMBL
Match: A0A0A0LQY7 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043020 PE=4 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 9.2e-186
Identity = 352/427 (82.44%), Postives = 365/427 (85.48%), Query Frame = 0


Query: 1   MLADLSSPSLPYFDPLSNCFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           MLADLSSPSLP F+PLSNCFENN +NNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE
Sbjct: 1   MLADLSSPSLPCFEPLSNCFENNGTNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLV 120
           ICNQGFQRDQNLQMHRRRHKVPWKLLKRTE    VRKRVFVCPEP+CLHHNPTHALGDLV
Sbjct: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTETTTVVRKRVFVCPEPSCLHHNPTHALGDLV 120

Query: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180
           GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180

Query: 181 QDTCKLGHHQQLEKIPSLQPPPCLSRTASSPTPSPSSDKNLSFLNQNH----KFTSTH-- 240
           QD CKLGHH Q ++  S Q  PCLSRTASSPTPSPSSD N SFLNQN     KFTSTH  
Sbjct: 181 QDNCKLGHHHQQQQ--SEQKIPCLSRTASSPTPSPSSDTNFSFLNQNQNQNPKFTSTHHH 240

Query: 241 -----ADKSATAPT-TPQKIISH-HQNLDLQLSTNS-TSIHVSVSPKRHENYSTHLQLSI 300
                ADK +   T  PQ+II H HQNLDLQLSTNS TSIHVSVSPKRHENYSTHLQLSI
Sbjct: 241 HHNHGADKYSKKTTIIPQRIIGHNHQNLDLQLSTNSTTSIHVSVSPKRHENYSTHLQLSI 300

Query: 301 GSCNYGEK--------------SDHYNDDEKIGSRLGFLRLKEEAKEQMKVAMEEKEMAE 360
           GSCNYGEK               DH+NDD+    +LGFL+LKEEAKEQM++AMEEK MAE
Sbjct: 301 GSCNYGEKLHDHHHDNNNNSNDRDHHNDDDD-DEKLGFLKLKEEAKEQMRMAMEEKAMAE 360

Query: 361 EARNEAKKQIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQH 400
           EARNEAKKQIEMAEKEL NAKRMRQQAQAELQRAL LKE AIKKINSTILQITCQVCRQH
Sbjct: 361 EARNEAKKQIEMAEKELVNAKRMRQQAQAELQRALVLKEHAIKKINSTILQITCQVCRQH 420

[Close]

BLAST of Sed0013208 vs. ExPASy TrEMBL
Match: A0A1S3CSS3 (protein SHOOT GRAVITROPISM 5-like OS=Cucumis melo OX=3656 GN=LOC103504552 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 2.1e-185
Identity = 349/426 (81.92%), Postives = 364/426 (85.45%), Query Frame = 0


Query: 1   MLADLSSPSLPYFDPLSNCFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           MLADLSSPSLP F+PLSNCFENN +NNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE
Sbjct: 1   MLADLSSPSLPCFEPLSNCFENNGTNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLV 120
           ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEA   VRKRVFVCPEP+CLHHNPTHALGDLV
Sbjct: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEATTVVRKRVFVCPEPSCLHHNPTHALGDLV 120

Query: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180
           GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180

Query: 181 QDTCKLGHHQQLEKIPSLQPPPCLSRTASSPTPSPSSDKNLSFLNQNH------KFTSTH 240
           QD CKLGHH   ++  S Q  PCLSRTASSPTPSPSSD N SFLNQN       KFTSTH
Sbjct: 181 QDNCKLGHHHHHQQQQSDQKIPCLSRTASSPTPSPSSDTNFSFLNQNQNQNQNPKFTSTH 240

Query: 241 -----ADKSATAPT-TPQKIISH-HQNLDLQLSTNS-TSIHVSVSPKRHENYSTHLQLSI 300
                ADK +   T  PQ+II H HQNLDLQLSTNS TSIHVSVSPKRHENYSTHLQLSI
Sbjct: 241 HHNHGADKYSKKTTIIPQRIIGHNHQNLDLQLSTNSTTSIHVSVSPKRHENYSTHLQLSI 300

Query: 301 GSCNYGEK-------------SDHYNDDEKIGSRLGFLRLKEEAKEQMKVAMEEKEMAEE 360
           GSCNYGEK             +DH ++D+    +LG L+LKEEAKEQM++AMEEK MAEE
Sbjct: 301 GSCNYGEKLHDHHDNNNNNNSNDHDHNDDDNDEKLGLLKLKEEAKEQMRMAMEEKAMAEE 360

Query: 361 ARNEAKKQIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQHF 400
           ARNEAKKQIEMAEKEL NAKRMRQQAQAELQRAL LKE AIKKINSTILQITCQVCRQHF
Sbjct: 361 ARNEAKKQIEMAEKELVNAKRMRQQAQAELQRALVLKEHAIKKINSTILQITCQVCRQHF 420

[Close]

BLAST of Sed0013208 vs. ExPASy TrEMBL
Match: A0A6J1EE04 (protein SHOOT GRAVITROPISM 5-like OS=Cucurbita moschata OX=3662 GN=LOC111431681 PE=4 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 1.0e-176
Identity = 327/402 (81.34%), Postives = 347/402 (86.32%), Query Frame = 0


Query: 1   MLADLSSPSLPYFDPLSNCFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           MLADLSSPSLP F+PL NCFE+N +N KRKRRPAGTPDPDAEVVSLSPKTLLESD YVCE
Sbjct: 1   MLADLSSPSLPCFEPLPNCFESNGTNTKRKRRPAGTPDPDAEVVSLSPKTLLESDHYVCE 60

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLV 120
           ICNQGFQRDQNLQMHRRRHKVPWKLLKRTE    VRKRVFVCPEP+CLHHNPTHALGDLV
Sbjct: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEPTTAVRKRVFVCPEPSCLHHNPTHALGDLV 120

Query: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180
           GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180

Query: 181 QDTCKLGHHQQLEKIPSLQPPPCLSRTASSPTPSPSSDKNLSFLNQNHKFTSTHADKSAT 240
           QD+CKLGHH Q     S Q  PCLSRTASSPTPSPSSD N SF N+NH            
Sbjct: 181 QDSCKLGHHHQ----QSEQKLPCLSRTASSPTPSPSSDTNFSFFNKNHTI---------- 240

Query: 241 APTTPQKIISHH-QNLDLQLSTNSTSIHVSVSPKRHENYSTHLQLSIGSCNYGEKSDHYN 300
               PQ+II+HH QNL+LQLS NSTSIHVSVSPKRHENYSTHLQLSIGSCNY EK+D  +
Sbjct: 241 ---IPQRIITHHPQNLELQLSNNSTSIHVSVSPKRHENYSTHLQLSIGSCNYDEKNDDGD 300

Query: 301 D--DEKIGSRLGFLRLKEEAKEQMKVAMEEKEMAEEARNEAKKQIEMAEKELANAKRMRQ 360
           D  DEK  + L FL++KEEAKEQM+VAMEEK +AEEARNEAKKQIE+AEKELANAKRMRQ
Sbjct: 301 DDHDEKTRNGLDFLKVKEEAKEQMRVAMEEKAIAEEARNEAKKQIEIAEKELANAKRMRQ 360

Query: 361 QAQAELQRALALKEQAIKKINSTILQITCQVCRQHFHQLPKI 400
           +AQ ELQRALALKE A+K+INSTILQITCQVCRQHF   P I
Sbjct: 361 EAQGELQRALALKEHAMKQINSTILQITCQVCRQHFEPFPTI 385

[Close]

BLAST of Sed0013208 vs. ExPASy TrEMBL
Match: A0A6J1KHM5 (protein SHOOT GRAVITROPISM 5-like OS=Cucurbita maxima OX=3661 GN=LOC111495827 PE=4 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 1.7e-176
Identity = 326/402 (81.09%), Postives = 347/402 (86.32%), Query Frame = 0


Query: 1   MLADLSSPSLPYFDPLSNCFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           MLADLSSPSLP F+PL NCFE+N +N KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE
Sbjct: 1   MLADLSSPSLPCFEPLPNCFESNGTNTKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLV 120
           ICNQGFQRDQNLQMHRRRHKVPWKLLKRTE    VRKRVFVCPEP+CLHHNPTHALGDLV
Sbjct: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTEPTTAVRKRVFVCPEPSCLHHNPTHALGDLV 120

Query: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180
           GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 121 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 180

Query: 181 QDTCKLGHHQQLEKIPSLQPPPCLSRTASSPTPSPSSDKNLSFLNQNHKFTSTHADKSAT 240
           QD+CKLGHH Q     S Q  PCLSRTASSPTPSPSSD N SF N+NH            
Sbjct: 181 QDSCKLGHHHQ----QSEQKLPCLSRTASSPTPSPSSDTNFSFFNKNHTI---------- 240

Query: 241 APTTPQKIISHH-QNLDLQLSTNSTSIHVSVSPKRHENYSTHLQLSIGSCNYGEKSDHYN 300
               PQ+II+HH QNL+LQLS NSTSIH+SVSPKR ENYSTHLQLSIGSCNY EK+D  +
Sbjct: 241 ---IPQRIITHHPQNLELQLSNNSTSIHLSVSPKRRENYSTHLQLSIGSCNYDEKNDDGD 300

Query: 301 D--DEKIGSRLGFLRLKEEAKEQMKVAMEEKEMAEEARNEAKKQIEMAEKELANAKRMRQ 360
           D  DEK G+ L F ++KEEAKEQM+VAMEEK +AEEARNEAKKQIE+AEKELANAKRMRQ
Sbjct: 301 DDHDEKTGNGLDFFKVKEEAKEQMRVAMEEKAIAEEARNEAKKQIEIAEKELANAKRMRQ 360

Query: 361 QAQAELQRALALKEQAIKKINSTILQITCQVCRQHFHQLPKI 400
           +AQ ELQRALALKE A+K+INSTILQITCQVCRQHF   P I
Sbjct: 361 EAQGELQRALALKEHAMKQINSTILQITCQVCRQHFEPFPTI 385

[Close]

BLAST of Sed0013208 vs. ExPASy TrEMBL
Match: A0A6J1K323 (protein SHOOT GRAVITROPISM 5-like OS=Cucurbita maxima OX=3661 GN=LOC111490213 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 1.1e-175
Identity = 328/410 (80.00%), Postives = 351/410 (85.61%), Query Frame = 0


Query: 1   MLADLSSPSLPYFDPLSNCFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           M+ADLSS      DPL NCF +N +N+KRKRRP GTPDPDAEVVSLSPKTLLESD YVCE
Sbjct: 1   MVADLSS-----LDPLPNCFHSNGTNSKRKRRPTGTPDPDAEVVSLSPKTLLESDSYVCE 60

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRTE---AAATVRKRVFVCPEPTCLHHNPTHALG 120
           IC+QGFQRDQNLQMHRRRHKVPWKLLKRTE      T RKRVFVCPEP+CLHHNPTHALG
Sbjct: 61  ICHQGFQRDQNLQMHRRRHKVPWKLLKRTETTTTTTTTRKRVFVCPEPSCLHHNPTHALG 120

Query: 121 DLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF 180
           DLVGIKKHFRRKHSNHKQWVCEKC+KGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF
Sbjct: 121 DLVGIKKHFRRKHSNHKQWVCEKCAKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF 180

Query: 181 IEHQDTCKLGHHQQLEKIPSLQ----PPPCLSRTASSPTPSPSSDKNLSFLNQNHKFTST 240
           IEHQD+CKLGHHQQ EK  SLQ    PPPCLSRTASSPTP+PSSD N SFLNQ H     
Sbjct: 181 IEHQDSCKLGHHQQPEKEASLQPPPPPPPCLSRTASSPTPTPSSDTNFSFLNQTH----- 240

Query: 241 HADKSATAPTTPQKIISHHQNLDLQLSTNSTSIHVSVSPKRHENYSTHLQLSIGSCNYGE 300
                   P TPQK+I+HHQNLDLQLST+S SI VSVSPK+HENY+THLQLSIGSCNYGE
Sbjct: 241 -------TPKTPQKLITHHQNLDLQLSTSSNSIKVSVSPKKHENYATHLQLSIGSCNYGE 300

Query: 301 KS---DHY--NDDEKIGSRLGFLRLKEEAKEQMKVAMEEKEMAEEARNEAKKQIEMAEKE 360
           K+   DHY  N DE+IG+ L  L+LKEEAK++M+VA EEK +AEEARNEAKKQIE+AEKE
Sbjct: 301 KNEQKDHYQMNFDEQIGNGLSLLKLKEEAKQRMRVAREEKAVAEEARNEAKKQIELAEKE 360

Query: 361 LANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQHFHQLPK 399
           LANAKRMRQQAQAELQRALALKE AI KINSTILQITCQVCRQHFH L K
Sbjct: 361 LANAKRMRQQAQAELQRALALKEHAINKINSTILQITCQVCRQHFHPLHK 393

[Close]

BLAST of Sed0013208 vs. TAIR 10
Match: AT2G01940.1 (C2H2-like zinc finger protein )

HSP 1 Score: 400.2 bits (1027), Expect = 1.9e-111
Identity = 243/422 (57.58%), Postives = 287/422 (68.01%), Query Frame = 0


Query: 6   SSPSLPYFDPLSN-CFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQ 65
           SS S P+     N     N S  KRKRRPAGTPDPDAEVVSLSP+TLLESDRY+CEICNQ
Sbjct: 21  SSSSDPFLSSSENGVTTTNTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQ 80

Query: 66  GFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLVGIKK 125
           GFQRDQNLQMHRRRHKVPWKLLKR +    V+KRV+VCPEPTCLHHNP HALGDLVGIKK
Sbjct: 81  GFQRDQNLQMHRRRHKVPWKLLKR-DNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKK 140

Query: 126 HFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 185
           HFRRKHSNHKQWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD C
Sbjct: 141 HFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNC 200

Query: 186 KLGH-HQQLEKIP--SLQPPPCLSRTASSPTPSPSSDKNLSFLNQNHKFTSTHADKSATA 245
                H++  + P  ++  P C SRTAS+   +PSS+ N                    A
Sbjct: 201 SARRVHREPPRPPQTAVTVPACSSRTAST-VSTPSSETNYG---------------GTVA 260

Query: 246 PTTPQKI----------------ISHHQNLDLQLSTNSTSIHVS--------VSPKRHEN 305
            TTPQ +                 S++ NL+LQL   S++ + +          P  H N
Sbjct: 261 VTTPQPLEGRPIHQRISSSILTNSSNNLNLELQLLPLSSNQNPNQENQQQKVKEPSHHHN 320

Query: 306 Y---STHLQLSIG-SCNYGEKSDHYNDDEKIGSRLGFLRLKE-EAKEQ-MKVAMEEKEMA 365
           +   +T+L LSI  S +Y     HYN+         F R+KE  A EQ MK+AM+EK  A
Sbjct: 321 HNHDTTNLNLSIAPSSSY----QHYNN---------FDRIKEIMASEQIMKIAMKEKAYA 380

Query: 366 EEARNEAKKQIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQ 394
           EEA+ EAK+Q E+AE E ANAK++RQ+AQAEL+RA  LKEQ++KKI+STI+Q+TCQ C+ 
Sbjct: 381 EEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCKG 412

[Close]

BLAST of Sed0013208 vs. TAIR 10
Match: AT2G01940.3 (C2H2-like zinc finger protein )

HSP 1 Score: 387.5 bits (994), Expect = 1.3e-107
Identity = 240/423 (56.74%), Postives = 284/423 (67.14%), Query Frame = 0


Query: 6   SSPSLPYFDPLSN-CFENNESNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQ 65
           SS S P+     N     N S  KRKRRPAGTPDPDAEVVSLSP+TLLESDRY+CEICNQ
Sbjct: 21  SSSSDPFLSSSENGVTTTNTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQ 80

Query: 66  GFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLVGIKK 125
           GFQRDQNLQMHRRRHKVPWKLLKR +    V+KRV+VCPEPTCLHHNP HALGDLVGIKK
Sbjct: 81  GFQRDQNLQMHRRRHKVPWKLLKR-DNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKK 140

Query: 126 HFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFS-RVESFIEHQDT 185
           HFRRKHSNHKQWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCG   S RVESFIEHQD 
Sbjct: 141 HFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGFFSSFRVESFIEHQDN 200

Query: 186 CKLGH-HQQLEKIP--SLQPPPCLSRTASSPTPSPSSDKNLSFLNQNHKFTSTHADKSAT 245
           C     H++  + P  ++  P C SRTAS+   +PSS+ N                    
Sbjct: 201 CSARRVHREPPRPPQTAVTVPACSSRTAST-VSTPSSETNYG---------------GTV 260

Query: 246 APTTPQKI----------------ISHHQNLDLQLSTNSTSIHVS--------VSPKRHE 305
           A TTPQ +                 S++ NL+LQL   S++ + +          P  H 
Sbjct: 261 AVTTPQPLEGRPIHQRISSSILTNSSNNLNLELQLLPLSSNQNPNQENQQQKVKEPSHHH 320

Query: 306 NY---STHLQLSIG-SCNYGEKSDHYNDDEKIGSRLGFLRLKE-EAKEQ-MKVAMEEKEM 365
           N+   +T+L LSI  S +Y     HYN+         F R+KE  A EQ MK+AM+EK  
Sbjct: 321 NHNHDTTNLNLSIAPSSSY----QHYNN---------FDRIKEIMASEQIMKIAMKEKAY 380

Query: 366 AEEARNEAKKQIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCR 394
           AEEA+ EAK+Q E+AE E ANAK++RQ+AQAEL+RA  LKEQ++KKI+STI+Q+TCQ C+
Sbjct: 381 AEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCK 413

[Close]

BLAST of Sed0013208 vs. TAIR 10
Match: AT1G68130.1 (indeterminate(ID)-domain 14 )

HSP 1 Score: 364.4 bits (934), Expect = 1.2e-100
Identity = 209/368 (56.79%), Postives = 253/368 (68.75%), Query Frame = 0


Query: 28  KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 87
           KRKRRPAGTPDP+AEVVSLSP+TLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK
Sbjct: 41  KRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 100

Query: 88  RTEAAATVRKRVFVCPEPTCLHHNPTHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAV 147
           R E    VRKRV+VCPEPTCLHHNP HALGDLVGIKKHFRRKHSNHKQW+CE+CSKGYAV
Sbjct: 101 R-ETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERCSKGYAV 160

Query: 148 QSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTCKLGHHQQLEK--IPSLQPPPCLS 207
           QSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC +   Q          Q     +
Sbjct: 161 QSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTCTVRRSQPSNHRLHEQQQHTTNAT 220

Query: 208 RTASSPTPSPSSDKNLSFLNQNHKFTSTHADKSATAPTTPQKIISHHQNLDLQLSTNSTS 267
           +TAS+   + + D ++  +   H      +  S   P+T          L     TN  S
Sbjct: 221 QTASTAENNENGDLSIGPILPGHPLQRRQSPPSEQQPST----------LLYPFVTNG-S 280

Query: 268 IHVSVSPKRHENYSTHLQLSIGSCNYGEKSDHYNDDEKIGSRLGFLRLKEEAKEQMKVAM 327
           I + + P R+    T L LSIG+            D+K  S      +++++ E+ + ++
Sbjct: 281 IELQLLPSRNCADETSLSLSIGTM-----------DQKTMS-----EVEKKSYEKGETSL 340

Query: 328 EEKEMAEEARNEAKKQIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQIT 387
           E     EEAR E K+QIE+AE E A AKR+RQ A+AEL +A   +E+A ++I++T++QIT
Sbjct: 341 ER----EEARRETKRQIEIAELEFAEAKRIRQHARAELHKAHLFREEASRRISATMMQIT 376

Query: 388 CQVCRQHF 394
           C  C+QHF
Sbjct: 401 CHNCKQHF 376

[Close]

BLAST of Sed0013208 vs. TAIR 10
Match: AT1G25250.1 (indeterminate(ID)-domain 16 )

HSP 1 Score: 339.7 bits (870), Expect = 3.1e-93
Identity = 200/366 (54.64%), Postives = 236/366 (64.48%), Query Frame = 0


Query: 38  DPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRTEAAATVRK 97
           DPDAEVVSLSP+TLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKR +    VRK
Sbjct: 20  DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRK 79

Query: 98  RVFVCPEPTCLHHNPTHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT 157
           RV+VCPEPTCLHH+P HALGDLVGIKKHFRRKHS HKQWVCE+CSKGYAVQSDYKAHLKT
Sbjct: 80  RVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKT 139

Query: 158 CGTRGHSCDCGRVFSRVESFIEHQDTCKL------GHHQQLEKIPSLQPPPCLSRTASSP 217
           CG+RGHSCDCGRVFSRVESFIEHQDTC +       H    +    L  P   SRT S+ 
Sbjct: 140 CGSRGHSCDCGRVFSRVESFIEHQDTCTIRQPQPTNHRHLQQHTMGLDAP---SRTTSTA 199

Query: 218 TPSPSSDKNLSFLNQNHKFTSTHADKSATAPTTPQKIISHHQNLDLQLSTNSTSIHVSVS 277
           +  P     L  L                    P+    H        + +S        
Sbjct: 200 SFGPLL-HGLPLLR------------------PPRPSNQHSPAFAYPFNASSAPFE---- 259

Query: 278 PKRHENYSTHLQLSIGSCNYGEKSDHYNDDEKIGSRLGFLRLKEEAKEQMKVAMEEKEMA 337
                  S  LQLSIG      ++ H   +EK  + L   R  EEA++           A
Sbjct: 260 -------SLELQLSIGMARTSAQARH---NEKRETSLTKERANEEARK-----------A 319

Query: 338 EEARNEAKKQIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQ 397
           EE R EAK+QIEMAEK+   AKR+R++A+ EL++A  ++E+AIK+IN+T+++ITC  C+Q
Sbjct: 320 EETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKAHVVREEAIKRINATMMEITCHSCKQ 337

[Close]

BLAST of Sed0013208 vs. TAIR 10
Match: AT2G01940.2 (C2H2-like zinc finger protein )

HSP 1 Score: 303.9 bits (777), Expect = 1.9e-82
Identity = 192/353 (54.39%), Postives = 233/353 (66.01%), Query Frame = 0


Query: 74  MHRRRHKVPWKLLKRTEAAATVRKRVFVCPEPTCLHHNPTHALGDLVGIKKHFRRKHSNH 133
           MHRRRHKVPWKLLKR +    V+KRV+VCPEPTCLHHNP HALGDLVGIKKHFRRKHSNH
Sbjct: 1   MHRRRHKVPWKLLKR-DNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNH 60

Query: 134 KQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTCKLGH-HQQL 193
           KQWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD C     H++ 
Sbjct: 61  KQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSARRVHREP 120

Query: 194 EKIP--SLQPPPCLSRTASSPTPSPSSDKNLSFLNQNHKFTSTHADKSATAPTTPQKI-- 253
            + P  ++  P C SRTAS+   +PSS+ N                    A TTPQ +  
Sbjct: 121 PRPPQTAVTVPACSSRTAST-VSTPSSETNYG---------------GTVAVTTPQPLEG 180

Query: 254 --------------ISHHQNLDLQLSTNSTSIHVS--------VSPKRHENY---STHLQ 313
                          S++ NL+LQL   S++ + +          P  H N+   +T+L 
Sbjct: 181 RPIHQRISSSILTNSSNNLNLELQLLPLSSNQNPNQENQQQKVKEPSHHHNHNHDTTNLN 240

Query: 314 LSIG-SCNYGEKSDHYNDDEKIGSRLGFLRLKE-EAKEQ-MKVAMEEKEMAEEARNEAKK 373
           LSI  S +Y     HYN+         F R+KE  A EQ MK+AM+EK  AEEA+ EAK+
Sbjct: 241 LSIAPSSSY----QHYNN---------FDRIKEIMASEQIMKIAMKEKAYAEEAKREAKR 300

Query: 374 QIEMAEKELANAKRMRQQAQAELQRALALKEQAIKKINSTILQITCQVCRQHF 394
           Q E+AE E ANAK++RQ+AQAEL+RA  LKEQ++KKI+STI+Q+TCQ C+  F
Sbjct: 301 QREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCKGQF 323

The following BLAST results are available for this feature:

BLAST of Sed0013208 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895030.1	1.3e-186	84.63	zinc finger protein SHOOT GRAVITROPISM 5-like [Benincasa hispida]	[more]
XP_011650944.1	1.9e-185	82.44	zinc finger protein SHOOT GRAVITROPISM 5 [Cucumis sativus] >KGN64198.1 hypotheti...	[more]
XP_008467125.1	4.2e-185	81.92	PREDICTED: protein SHOOT GRAVITROPISM 5-like [Cucumis melo]	[more]
KAG6572982.1	9.5e-177	80.10	Zinc finger protein SHOOT GRAVITROPISM 5, partial [Cucurbita argyrosperma subsp....	[more]
XP_022924154.1	2.1e-176	81.34	protein SHOOT GRAVITROPISM 5-like [Cucurbita moschata] >XP_022924155.1 protein S...	[more]

BLAST of Sed0013208 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IPE3	2.7e-110	57.58	Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5...	[more]
Q9C9X7	1.7e-99	56.79	Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV...	[more]
Q9FRH4	4.4e-92	54.64	Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV...	[more]
Q9SCQ6	1.4e-58	48.82	Zinc finger protein GAI-ASSOCIATED FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=G...	[more]
Q700D2	1.2e-57	58.43	Zinc finger protein JACKDAW OS=Arabidopsis thaliana OX=3702 GN=JKD PE=1 SV=1	[more]

BLAST of Sed0013208 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQY7	9.2e-186	82.44	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043020 P...	[more]
A0A1S3CSS3	2.1e-185	81.92	protein SHOOT GRAVITROPISM 5-like OS=Cucumis melo OX=3656 GN=LOC103504552 PE=4 S...	[more]
A0A6J1EE04	1.0e-176	81.34	protein SHOOT GRAVITROPISM 5-like OS=Cucurbita moschata OX=3662 GN=LOC111431681 ...	[more]
A0A6J1KHM5	1.7e-176	81.09	protein SHOOT GRAVITROPISM 5-like OS=Cucurbita maxima OX=3661 GN=LOC111495827 PE...	[more]
A0A6J1K323	1.1e-175	80.00	protein SHOOT GRAVITROPISM 5-like OS=Cucurbita maxima OX=3661 GN=LOC111490213 PE...	[more]

BLAST of Sed0013208 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01940.1	1.9e-111	57.58	C2H2-like zinc finger protein	[more]
AT2G01940.3	1.3e-107	56.74	C2H2-like zinc finger protein	[more]
AT1G68130.1	1.2e-100	56.79	indeterminate(ID)-domain 14	[more]
AT1G25250.1	3.1e-93	54.64	indeterminate(ID)-domain 16	[more]
AT2G01940.2	1.9e-82	54.39	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 311..376
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 45..132 e-value: 2.0E-5 score: 26.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..223
None	No IPR available	PANTHER	PTHR34946:SF11	PROTEIN INDETERMINATE-DOMAIN 16-LIKE	coord: 15..395
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 100..130 e-value: 110.0 score: 4.1 coord: 136..163 e-value: 60.0 score: 6.4 coord: 57..79 e-value: 0.0052 score: 26.0
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 59..79
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 57..79 score: 10.969637
IPR039288	Zinc finger protein SHOOT GRAVITROPISM 5-like	PANTHER	PTHR34946	OS03G0310200 PROTEIN	coord: 15..395
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 56..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013208.1	Sed0013208.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009630	gravitropism
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity