Sed0013073 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAGTGATCACCGCCCACACACAAAACCCAAAGCTGCCGTCGGTTTCCGCCGCACATTTCCCTATGCCACCGCCCCTCCCTCCTTTATAAACTCCCACTTTCCCAAACTTCACTTTCTCACTGATTCTTCTCTTTCCCTACAAACCGTGGCGGCTATGGCACCCAAGTCTTATCCCGTTGAGAACCACATCGCCGGAGACCAAGAGGAGGCGGCGGTGGGCCCAGATGTGAGCAGGCGTATTCAGCTGAAGTCTTCTCAAGTACTCGACAAGGCGGTGGTGCTGCGGCGGATCCGGCACCGGAAGCGTGTTAGCAAGTTCAAAGCGGCGGTCGGAGCTCTGTTCAGCTCACCCATCGCCGACCAAAGCGCCGACAGTGGTCACACCAAATGGGTGGACGAACCCTTCACTTCACTTTAGACCAATTCCTAATTATTTTTAAGATTTTTCTTCTGTGCTTCCTTGTAGTGTAATTGTACCATTCATATGGCTGAAGATTGATGTGTGTATATATATATATATTTCTTTTCATTTAGATTTATCAGATATGACTTTCAATATATTCTTTAG CGAGTGATCACCGCCCACACACAAAACCCAAAGCTGCCGTCGGTTTCCGCCGCACATTTCCCTATGCCACCGCCCCTCCCTCCTTTATAAACTCCCACTTTCCCAAACTTCACTTTCTCACTGATTCTTCTCTTTCCCTACAAACCGTGGCGGCTATGGCACCCAAGTCTTATCCCGTTGAGAACCACATCGCCGGAGACCAAGAGGAGGCGGCGGTGGGCCCAGATGTGAGCAGGCGTATTCAGCTGAAGTCTTCTCAAGTACTCGACAAGGCGGTGGTGCTGCGGCGGATCCGGCACCGGAAGCGTGTTAGCAAGTTCAAAGCGGCGGTCGGAGCTCTGTTCAGCTCACCCATCGCCGACCAAAGCGCCGACAGTGGTCACACCAAATGGGTGGACGAACCCTTCACTTCACTTTAGACCAATTCCTAATTATTTTTAAGATTTTTCTTCTGTGCTTCCTTGTAGTGTAATTGTACCATTCATATGGCTGAAGATTGATGTGTGTATATATATATATATTTCTTTTCATTTAGATTTATCAGATATGACTTTCAATATATTCTTTAG ATGGCACCCAAGTCTTATCCCGTTGAGAACCACATCGCCGGAGACCAAGAGGAGGCGGCGGTGGGCCCAGATGTGAGCAGGCGTATTCAGCTGAAGTCTTCTCAAGTACTCGACAAGGCGGTGGTGCTGCGGCGGATCCGGCACCGGAAGCGTGTTAGCAAGTTCAAAGCGGCGGTCGGAGCTCTGTTCAGCTCACCCATCGCCGACCAAAGCGCCGACAGTGGTCACACCAAATGGGTGGACGAACCCTTCACTTCACTTTAG MAPKSYPVENHIAGDQEEAAVGPDVSRRIQLKSSQVLDKAVVLRRIRHRKRVSKFKAAVGALFSSPIADQSADSGHTKWVDEPFTSL Homology
BLAST of Sed0013073 vs. NCBI nr
Match: KAG6598407.1 (hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 106.3 bits (264), Expect = 1.4e-19 Identity = 61/100 (61.00%), Postives = 72/100 (72.00%), Query Frame = 0
BLAST of Sed0013073 vs. NCBI nr
Match: KAG6585633.1 (hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020540.1 hypothetical protein SDJN02_17225, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 101.3 bits (251), Expect = 4.4e-18 Identity = 58/96 (60.42%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of Sed0013073 vs. NCBI nr
Match: KAA0065270.1 (hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa]) HSP 1 Score: 99.4 bits (246), Expect = 1.7e-17 Identity = 57/100 (57.00%), Postives = 69/100 (69.00%), Query Frame = 0
BLAST of Sed0013073 vs. NCBI nr
Match: KGN62559.1 (hypothetical protein Csa_022598 [Cucumis sativus]) HSP 1 Score: 92.0 bits (227), Expect = 2.6e-15 Identity = 58/110 (52.73%), Postives = 68/110 (61.82%), Query Frame = 0
BLAST of Sed0013073 vs. NCBI nr
Match: KAG7029360.1 (Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 84.7 bits (208), Expect = 4.2e-13 Identity = 51/87 (58.62%), Postives = 62/87 (71.26%), Query Frame = 0
BLAST of Sed0013073 vs. ExPASy TrEMBL
Match: A0A5A7VDJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006120 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 8.0e-18 Identity = 57/100 (57.00%), Postives = 69/100 (69.00%), Query Frame = 0
BLAST of Sed0013073 vs. ExPASy TrEMBL
Match: A0A0A0LNJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.3e-15 Identity = 58/110 (52.73%), Postives = 68/110 (61.82%), Query Frame = 0
BLAST of Sed0013073 vs. ExPASy TrEMBL
Match: A0A6P5MGE6 (uncharacterized protein LOC110274446 OS=Arachis duranensis OX=130453 GN=LOC110274446 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.2e-07 Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of Sed0013073 vs. ExPASy TrEMBL
Match: A0A7J7D397 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G00807 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.9e-06 Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of Sed0013073 vs. ExPASy TrEMBL
Match: A0A7J7D384 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G00806 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 7.0e-06 Identity = 33/78 (42.31%), Postives = 52/78 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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