Sed0012979 (gene) Chayote v1

Overview


Name	Sed0012979
Type	gene
Organism	Sechium edule (Chayote v1)
Description	calmodulin-like
Location	LG11: 24179208 .. 24179685 (+)
RNA-Seq Expression	Sed0012979
Synteny	Sed0012979

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCTCTATCAAAAACCCCAAACCAAAACAAGATGGAAAACAACCTTCACAATGTACTCCAAAGGCCACTTTCCGAAAAGGAAGCAGATGATGTGCTCAGGCAACGTGATACCAACAAAGATGGGGTCATTGATAAGAAGGAGCTGATGAGAGATTTGAGGCCCTCCAAACTACAACTCTCTCGCGAGGAGATCAAAGAAATGTTACTCGAGCACGACATTGATGGCGATGGTTATCTCAATTTCAACGAGGTAACCAAGGCTTTTAGTTCTTTGGGTGCCCTCCTACCGATGCATAAAGCTCGCTACGGCTTGAATTTTGCTGATGATGATGGTGATAATCTCATCAGTGAGGACGAACTTGATAAACTCATCGATTATTTTGAGAAAACTAACAAGAAGGGTTTGAAGAGAAGGCCTTGTTGAGTGTTGTTTAATGTGTATGGTTATGCAATAAAAGTGGTTGACTCACTATCCAA

mRNA sequence

AAGCTCTATCAAAAACCCCAAACCAAAACAAGATGGAAAACAACCTTCACAATGTACTCCAAAGGCCACTTTCCGAAAAGGAAGCAGATGATGTGCTCAGGCAACGTGATACCAACAAAGATGGGGTCATTGATAAGAAGGAGCTGATGAGAGATTTGAGGCCCTCCAAACTACAACTCTCTCGCGAGGAGATCAAAGAAATGTTACTCGAGCACGACATTGATGGCGATGGTTATCTCAATTTCAACGAGGTAACCAAGGCTTTTAGTTCTTTGGGTGCCCTCCTACCGATGCATAAAGCTCGCTACGGCTTGAATTTTGCTGATGATGATGGTGATAATCTCATCAGTGAGGACGAACTTGATAAACTCATCGATTATTTTGAGAAAACTAACAAGAAGGGTTTGAAGAGAAGGCCTTGTTGAGTGTTGTTTAATGTGTATGGTTATGCAATAAAAGTGGTTGACTCACTATCCAA

Coding sequence (CDS)

ATGGAAAACAACCTTCACAATGTACTCCAAAGGCCACTTTCCGAAAAGGAAGCAGATGATGTGCTCAGGCAACGTGATACCAACAAAGATGGGGTCATTGATAAGAAGGAGCTGATGAGAGATTTGAGGCCCTCCAAACTACAACTCTCTCGCGAGGAGATCAAAGAAATGTTACTCGAGCACGACATTGATGGCGATGGTTATCTCAATTTCAACGAGGTAACCAAGGCTTTTAGTTCTTTGGGTGCCCTCCTACCGATGCATAAAGCTCGCTACGGCTTGAATTTTGCTGATGATGATGGTGATAATCTCATCAGTGAGGACGAACTTGATAAACTCATCGATTATTTTGAGAAAACTAACAAGAAGGGTTTGAAGAGAAGGCCTTGTTGA

Protein sequence

MENNLHNVLQRPLSEKEADDVLRQRDTNKDGVIDKKELMRDLRPSKLQLSREEIKEMLLEHDIDGDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKLIDYFEKTNKKGLKRRPC

Homology

[Close]

BLAST of Sed0012979 vs. NCBI nr
Match: XP_022951882.1 (probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023537876.1 probable calcium-binding protein CML15 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.5 bits (454), Expect = 1.9e-41
Identity = 90/124 (72.58%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 4   NLHNVLQRPLSEKEADDVLRQRDTNKDGVIDKKELMRDLRPSKLQLSREEIKEMLLEHDI 63
           ++  +LQRPLSEKEAD VL+ RDTNKDGV++KKELM DLRPSKLQL+REEIKE+ LEHDI
Sbjct: 3   SIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDI 62

Query: 64  DGDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKLIDYFEKTNKK 123
           DGDG L+  EVTKAF+ +G+ L  HKAR+GL  AD DGD +ISE+ELDKL+DYFEKTNKK
Sbjct: 63  DGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEELDKLVDYFEKTNKK 122

Query: 124 GLKR 128
            LKR
Sbjct: 123 CLKR 126

[Close]

BLAST of Sed0012979 vs. NCBI nr
Match: XP_023002890.1 (probable calcium-binding protein CML15 [Cucurbita maxima])

HSP 1 Score: 177.2 bits (448), Expect = 9.3e-41
Identity = 88/124 (70.97%), Postives = 107/124 (86.29%), Query Frame = 0


Query: 4   NLHNVLQRPLSEKEADDVLRQRDTNKDGVIDKKELMRDLRPSKLQLSREEIKEMLLEHDI 63
           +L  +LQRPLSEKEAD VL+ RDTNKDGV++KKELM DLRPSKLQL+RE+IKE+ LEHDI
Sbjct: 3   SLQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREQIKEIFLEHDI 62

Query: 64  DGDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKLIDYFEKTNKK 123
           DGDG L+ +E++KAF+ +G+ L  HKAR+G+  AD DGD LISE+ELDKL+DYFEKTNKK
Sbjct: 63  DGDGCLSVSELSKAFNFMGSSLSFHKARHGMALADCDGDGLISEEELDKLVDYFEKTNKK 122

Query: 124 GLKR 128
            LKR
Sbjct: 123 CLKR 126

[Close]

BLAST of Sed0012979 vs. NCBI nr
Match: XP_038885760.1 (probable calcium-binding protein CML36 [Benincasa hispida])

HSP 1 Score: 132.5 bits (332), Expect = 2.6e-27
Identity = 72/126 (57.14%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 9   LQRPLSEKEADDVLRQRDTNKDGVIDKKELMRDL-----RP----SKLQLSREEIKEMLL 68
           LQRPLSEKEA+ VL  RD N DGV+DK+ELM DL     +P      + L+REEI+E+  
Sbjct: 8   LQRPLSEKEANLVLEMRDINGDGVLDKQELMADLTQINVKPCTTLPNMHLTREEIREIFT 67

Query: 69  EHDIDGDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKLIDYFEK 126
             DIDGDG+LN NE+T+AF  +G+  P+ KA Y +  ADDDGD LISE EL+KLIDY EK
Sbjct: 68  GFDIDGDGFLNKNELTQAFGMVGSYAPLFKAHYAMVHADDDGDGLISESELNKLIDYVEK 127

[Close]

BLAST of Sed0012979 vs. NCBI nr
Match: KAA0060891.1 (putative calcium-binding protein CML36 [Cucumis melo var. makuwa])

HSP 1 Score: 124.4 bits (311), Expect = 7.2e-25
Identity = 67/131 (51.15%), Postives = 93/131 (70.99%), Query Frame = 0


Query: 2   ENNLHNVLQRPLSEKEADDVLRQRDTNKDGVIDKKELMRDL-----RPS----KLQLSRE 61
           + +L   LQ+PLSEKEA+ VL+ RD N DG++DK+ELM DL     +PS     ++L+RE
Sbjct: 3   DKSLFLALQKPLSEKEANLVLKMRDANGDGILDKQELMTDLTHTNKKPSTNLPNMKLTRE 62

Query: 62  EIKEMLLEHDIDGDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDK 121
           EIKE+ +  DIDGDG+L+ NEV +AF  +G+  P+ K  Y +  AD+DGD LISE EL+K
Sbjct: 63  EIKEIFVGFDIDGDGFLSKNEVMQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNK 122

Query: 122 LIDYFEKTNKK 124
           LIDY ++TN +
Sbjct: 123 LIDYVQRTNNR 133

[Close]

BLAST of Sed0012979 vs. NCBI nr
Match: XP_008445562.1 (PREDICTED: probable calcium-binding protein CML36 [Cucumis melo])

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-24
Identity = 66/131 (50.38%), Postives = 92/131 (70.23%), Query Frame = 0


Query: 2   ENNLHNVLQRPLSEKEADDVLRQRDTNKDGVIDKKELMRDL-----RPS----KLQLSRE 61
           + +L   LQ+PLSEKEA+ V + RD N DG++DK+ELM DL     +PS     ++L+RE
Sbjct: 3   DKSLFLALQKPLSEKEANLVFKMRDANGDGILDKQELMTDLTHANKKPSTNLPNMKLTRE 62

Query: 62  EIKEMLLEHDIDGDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDK 121
           EIKE+ +  DIDGDG+L+ NEV +AF  +G+  P+ K  Y +  AD+DGD LISE EL+K
Sbjct: 63  EIKEIFVGFDIDGDGFLSKNEVMQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNK 122

Query: 122 LIDYFEKTNKK 124
           LIDY ++TN +
Sbjct: 123 LIDYVQRTNNR 133

[Close]

BLAST of Sed0012979 vs. ExPASy Swiss-Prot
Match: P05933 (Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.9e-06
Identity = 35/117 (29.91%), Postives = 59/117 (50.43%), Query Frame = 0


Query: 3   NNLHNVLQRPLSEK----EADDVLRQRDTNKDGVIDKKELMRDL-RPSKLQLSREEIKEM 62
           +N   V+ R L +     E  D++ + D + +G ID  E +  + R  K   + EE++E 
Sbjct: 31  SNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREA 90

Query: 63  LLEHDIDGDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKLI 115
               D DG+GY+   E+T   +SLG  L   +    +  AD DGD +I+ +E  ++I
Sbjct: 91  FKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVI 147

[Close]

BLAST of Sed0012979 vs. ExPASy Swiss-Prot
Match: Q7RAH3 (Calcium-dependent protein kinase 1 OS=Plasmodium yoelii yoelii OX=73239 GN=CDPK1 PE=3 SV=3)

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-05
Identity = 34/107 (31.78%), Postives = 51/107 (47.66%), Query Frame = 0


Query: 16  KEADDVLRQRDTNKDGVIDKKELMRD---LRPSKLQLS-----REEIKEMLLEHDIDGDG 75
           KE  D+ ++ D N DG +DKKEL+     LR  K +L       EE+  +L E D D +G
Sbjct: 374 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNG 433

Query: 76  YLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKLI 115
           Y+ ++E          L    + R   N  D D    I+++EL  +I
Sbjct: 434 YIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANVI 480

[Close]

BLAST of Sed0012979 vs. ExPASy Swiss-Prot
Match: A0A509AHB6 (Calcium-dependent protein kinase 1 OS=Plasmodium berghei (strain Anka) OX=5823 GN=CDPK1 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.9e-05
Identity = 34/106 (32.08%), Postives = 50/106 (47.17%), Query Frame = 0


Query: 16  KEADDVLRQRDTNKDGVIDKKELMRD---LRPSKLQLS-----REEIKEMLLEHDIDGDG 75
           KE  D+ ++ D N DG +DKKEL+     LR  K +L       EE+  +L E D D +G
Sbjct: 374 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNG 433

Query: 76  YLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKL 114
           Y+ ++E          L    + R   N  D D    I+++EL  L
Sbjct: 434 YIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANL 479

[Close]

BLAST of Sed0012979 vs. ExPASy Swiss-Prot
Match: P62344 (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=CDPK1 PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 2.9e-05
Identity = 34/106 (32.08%), Postives = 50/106 (47.17%), Query Frame = 0


Query: 16  KEADDVLRQRDTNKDGVIDKKELMRD---LRPSKLQLS-----REEIKEMLLEHDIDGDG 75
           KE  D+ ++ D N DG +DKKEL+     LR  K +L       EE+  +L E D D +G
Sbjct: 375 KELTDIFKKLDKNGDGQLDKKELIEGYNILRSFKNELGELKNVEEEVDNILKEVDFDKNG 434

Query: 76  YLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKL 114
           Y+ ++E          L    + R   N  D D    I+++EL  L
Sbjct: 435 YIEYSEFISVCMDKQILFSEERLRDAFNLFDTDKSGKITKEELANL 480

[Close]

BLAST of Sed0012979 vs. ExPASy Swiss-Prot
Match: P62343 (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate K1 / Thailand) OX=5839 GN=CDPK1 PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 2.9e-05
Identity = 34/106 (32.08%), Postives = 50/106 (47.17%), Query Frame = 0


Query: 16  KEADDVLRQRDTNKDGVIDKKELMRD---LRPSKLQLS-----REEIKEMLLEHDIDGDG 75
           KE  D+ ++ D N DG +DKKEL+     LR  K +L       EE+  +L E D D +G
Sbjct: 375 KELTDIFKKLDKNGDGQLDKKELIEGYNILRSFKNELGELKNVEEEVDNILKEVDFDKNG 434

Query: 76  YLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKL 114
           Y+ ++E          L    + R   N  D D    I+++EL  L
Sbjct: 435 YIEYSEFISVCMDKQILFSEERLRDAFNLFDTDKSGKITKEELANL 480

[Close]

BLAST of Sed0012979 vs. ExPASy TrEMBL
Match: A0A6J1GIW2 (probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC111454618 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.1e-42
Identity = 90/124 (72.58%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 4   NLHNVLQRPLSEKEADDVLRQRDTNKDGVIDKKELMRDLRPSKLQLSREEIKEMLLEHDI 63
           ++  +LQRPLSEKEAD VL+ RDTNKDGV++KKELM DLRPSKLQL+REEIKE+ LEHDI
Sbjct: 3   SIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDI 62

Query: 64  DGDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKLIDYFEKTNKK 123
           DGDG L+  EVTKAF+ +G+ L  HKAR+GL  AD DGD +ISE+ELDKL+DYFEKTNKK
Sbjct: 63  DGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEELDKLVDYFEKTNKK 122

Query: 124 GLKR 128
            LKR
Sbjct: 123 CLKR 126

[Close]

BLAST of Sed0012979 vs. ExPASy TrEMBL
Match: A0A6J1KQ84 (probable calcium-binding protein CML15 OS=Cucurbita maxima OX=3661 GN=LOC111496628 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.5e-41
Identity = 88/124 (70.97%), Postives = 107/124 (86.29%), Query Frame = 0


Query: 4   NLHNVLQRPLSEKEADDVLRQRDTNKDGVIDKKELMRDLRPSKLQLSREEIKEMLLEHDI 63
           +L  +LQRPLSEKEAD VL+ RDTNKDGV++KKELM DLRPSKLQL+RE+IKE+ LEHDI
Sbjct: 3   SLQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREQIKEIFLEHDI 62

Query: 64  DGDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKLIDYFEKTNKK 123
           DGDG L+ +E++KAF+ +G+ L  HKAR+G+  AD DGD LISE+ELDKL+DYFEKTNKK
Sbjct: 63  DGDGCLSVSELSKAFNFMGSSLSFHKARHGMALADCDGDGLISEEELDKLVDYFEKTNKK 122

Query: 124 GLKR 128
            LKR
Sbjct: 123 CLKR 126

[Close]

BLAST of Sed0012979 vs. ExPASy TrEMBL
Match: A0A5A7V530 (Putative calcium-binding protein CML36 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00240 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.5e-25
Identity = 67/131 (51.15%), Postives = 93/131 (70.99%), Query Frame = 0


Query: 2   ENNLHNVLQRPLSEKEADDVLRQRDTNKDGVIDKKELMRDL-----RPS----KLQLSRE 61
           + +L   LQ+PLSEKEA+ VL+ RD N DG++DK+ELM DL     +PS     ++L+RE
Sbjct: 3   DKSLFLALQKPLSEKEANLVLKMRDANGDGILDKQELMTDLTHTNKKPSTNLPNMKLTRE 62

Query: 62  EIKEMLLEHDIDGDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDK 121
           EIKE+ +  DIDGDG+L+ NEV +AF  +G+  P+ K  Y +  AD+DGD LISE EL+K
Sbjct: 63  EIKEIFVGFDIDGDGFLSKNEVMQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNK 122

Query: 122 LIDYFEKTNKK 124
           LIDY ++TN +
Sbjct: 123 LIDYVQRTNNR 133

[Close]

BLAST of Sed0012979 vs. ExPASy TrEMBL
Match: A0A1S3BD12 (probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103488542 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.0e-24
Identity = 66/131 (50.38%), Postives = 92/131 (70.23%), Query Frame = 0


Query: 2   ENNLHNVLQRPLSEKEADDVLRQRDTNKDGVIDKKELMRDL-----RPS----KLQLSRE 61
           + +L   LQ+PLSEKEA+ V + RD N DG++DK+ELM DL     +PS     ++L+RE
Sbjct: 3   DKSLFLALQKPLSEKEANLVFKMRDANGDGILDKQELMTDLTHANKKPSTNLPNMKLTRE 62

Query: 62  EIKEMLLEHDIDGDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDK 121
           EIKE+ +  DIDGDG+L+ NEV +AF  +G+  P+ K  Y +  AD+DGD LISE EL+K
Sbjct: 63  EIKEIFVGFDIDGDGFLSKNEVMQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNK 122

Query: 122 LIDYFEKTNKK 124
           LIDY ++TN +
Sbjct: 123 LIDYVQRTNNR 133

[Close]

BLAST of Sed0012979 vs. ExPASy TrEMBL
Match: A0A0A0LP46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358880 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.8e-24
Identity = 67/128 (52.34%), Postives = 90/128 (70.31%), Query Frame = 0


Query: 2   ENNLHNVLQRPLSEKEADDVLRQRDTNKDGVIDKKELMRDL-----RPS----KLQLSRE 61
           E +L   LQ+PLSEKEA+ +L  RD N DGV+DK+ELM DL     +PS     ++L+RE
Sbjct: 3   EKSLFVALQKPLSEKEANLLLEMRDANGDGVLDKQELMADLTHTNKKPSTSLQDMKLTRE 62

Query: 62  EIKEMLLEHDIDGDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDK 121
           EIKE+ +  DIDGDG+L+ NEV +AF  +G+  P+ KA Y +  AD+DGD  ISE EL+K
Sbjct: 63  EIKEIFVGFDIDGDGFLSKNEVIQAFGMMGSCSPIMKAHYAMACADEDGDGRISEPELNK 122

[Close]

BLAST of Sed0012979 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 )

HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06
Identity = 32/103 (31.07%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 14  SEKEADDVLRQRDTNKDGVIDKKELMRDLRPSKLQLS--REEIKEMLLEHDIDGDGYLNF 73
           +E+E  D++ + D++ +G I+  E + +L   KLQ S   EE+KE     D D +GY++ 
Sbjct: 46  TEQELHDIITEIDSDSNGTIEFAEFL-NLMAKKLQESDAEEELKEAFKVFDKDQNGYISA 105

Query: 74  NEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKLI 115
           +E++    +LG  L   +    +  AD DGD  ++ DE  K++
Sbjct: 106 SELSHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYDEFVKMM 147

[Close]

BLAST of Sed0012979 vs. TAIR 10
Match: AT4G23650.1 (calcium-dependent protein kinase 6 )

HSP 1 Score: 45.1 bits (105), Expect = 5.2e-05
Identity = 29/122 (23.77%), Postives = 59/122 (48.36%), Query Frame = 0


Query: 8   VLQRPLSEKE---ADDVLRQRDTNKDGVIDKKELMRDLRPSKLQLSREEIKEMLLEHDID 67
           V+   LSE+E     ++ +  DT+ +G++  +EL   L     ++S  EI++++   D+D
Sbjct: 371 VIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGSKISEAEIRQLMEAADMD 430

Query: 68  GDGYLNFNEVTKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKLIDYFEKTNKKG 127
           GDG +++ E   A   +  +           F D+D    I+ +EL+  +  +   + K 
Sbjct: 431 GDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDNDNSGYITMEELELAMKKYNMGDDKS 490

[Close]

BLAST of Sed0012979 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 )

HSP 1 Score: 44.7 bits (104), Expect = 6.7e-05
Identity = 25/70 (35.71%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 7   NVLQRPLSEKEADDVLRQRDTNKDGVIDKKELMRDLRPSKLQLSREEIKEMLLEHDIDGD 66
           N  Q   S+ E  +V R  D + DG+I + EL   ++   ++++ EE + M+ E D+DGD
Sbjct: 76  NTSQESASD-ELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGD 135

Query: 67  GYLNFNEVTK 77
           G+L+F+E +K
Sbjct: 136 GFLSFHEFSK 144

[Close]

BLAST of Sed0012979 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family )

HSP 1 Score: 44.3 bits (103), Expect = 8.8e-05
Identity = 32/103 (31.07%), Postives = 51/103 (49.51%), Query Frame = 0


Query: 16  KEADDVLRQRDTNKDGVIDKKELMRDLRPSKLQLSREEIKEMLLEHDIDGDGYLNFNEV- 75
           +E + V ++ D N DG I  KEL   +     ++  EE+++ + E D  GDGY+NF E  
Sbjct: 36  RELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFV 95

Query: 76  ---TKAFSSLGALLPMHKARYGLNFADDDGDNLISEDELDKLI 115
              TK       L  +  A    +  D DG+  IS +EL +++
Sbjct: 96  ELNTKGMDQNDVLENLKDA---FSVYDIDGNGSISAEELHEVL 135

[Close]

BLAST of Sed0012979 vs. TAIR 10
Match: AT1G18890.1 (calcium-dependent protein kinase 1 )

HSP 1 Score: 44.3 bits (103), Expect = 8.8e-05
Identity = 28/85 (32.94%), Postives = 39/85 (45.88%), Query Frame = 0


Query: 26  DTNKDGVIDKKELMRDLRPSKLQLSREEIKEMLLEHDIDGDGYLNFNEVTKAFSSLGALL 85
           D +KDG I   EL   L+    QL   EIK ++   D+DG+G+L++ E       L  + 
Sbjct: 377 DDDKDGKITYPELKAGLQKVGSQLGEPEIKMLMEVADVDGNGFLDYGEFVAVIIHLQKIE 436

Query: 86  PMHKARYGLNFADDDGDNLISEDEL 111
                +    F D DG   I  DEL
Sbjct: 437 NDELFKLAFMFFDKDGSTYIELDEL 461

The following BLAST results are available for this feature:

BLAST of Sed0012979 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951882.1	1.9e-41	72.58	probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023537876.1 prob...	[more]
XP_023002890.1	9.3e-41	70.97	probable calcium-binding protein CML15 [Cucurbita maxima]	[more]
XP_038885760.1	2.6e-27	57.14	probable calcium-binding protein CML36 [Benincasa hispida]	[more]
KAA0060891.1	7.2e-25	51.15	putative calcium-binding protein CML36 [Cucumis melo var. makuwa]	[more]
XP_008445562.1	2.1e-24	50.38	PREDICTED: probable calcium-binding protein CML36 [Cucumis melo]	[more]

BLAST of Sed0012979 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05933	5.9e-06	29.91	Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=c...	[more]
Q7RAH3	1.7e-05	31.78	Calcium-dependent protein kinase 1 OS=Plasmodium yoelii yoelii OX=73239 GN=CDPK1...	[more]
A0A509AHB6	2.9e-05	32.08	Calcium-dependent protein kinase 1 OS=Plasmodium berghei (strain Anka) OX=5823 G...	[more]
P62344	2.9e-05	32.08	Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate 3D7) OX=363...	[more]
P62343	2.9e-05	32.08	Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate K1 / Thaila...	[more]

BLAST of Sed0012979 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GIW2	9.1e-42	72.58	probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KQ84	4.5e-41	70.97	probable calcium-binding protein CML15 OS=Cucurbita maxima OX=3661 GN=LOC1114966...	[more]
A0A5A7V530	3.5e-25	51.15	Putative calcium-binding protein CML36 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BD12	1.0e-24	50.38	probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103488542 P...	[more]
A0A0A0LP46	3.8e-24	52.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358880 PE=4 SV=1	[more]

BLAST of Sed0012979 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14640.1	2.1e-06	31.07	calmodulin 8	[more]
AT4G23650.1	5.2e-05	23.77	calcium-dependent protein kinase 6	[more]
AT3G51920.1	6.7e-05	35.71	calmodulin 9	[more]
AT1G24620.1	8.8e-05	31.07	EF hand calcium-binding protein family	[more]
AT1G18890.1	8.8e-05	32.94	calcium-dependent protein kinase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 17..45 e-value: 1.9 score: 15.5 coord: 53..81 e-value: 4.2E-4 score: 29.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 22..78 e-value: 5.2E-8 score: 33.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 13..48 score: 10.998585
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 49..84 score: 13.313904
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 17..79 e-value: 4.86513E-11 score: 52.5501
None	No IPR available	GENE3D	1.10.238.10		coord: 1..127 e-value: 1.1E-17 score: 66.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..28
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 46..116 coord: 11..75
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 46..116 coord: 11..75
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 62..74
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 26..38
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 98..110
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 25..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012979.1	Sed0012979.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding