Sed0012966 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTACTTGTAACTTTTCATCATGAAATCTTCTTCTTCTTCTTCTTCTTGTTTTTCTCTTTCCGACCAACTTCACCTCCTCGGAAAAGTCGAGGTTTTTAAACTTCATGGTCGTGATAAATCCTCCCGCAATGTCCTCCTCATTGTTGCAAAATACTTTCCAGGTACACACCACCTACGAATATTGCATTACCTTTTACAGAGTTTAATGCATCTCTGTTTTATTATATGGCTTCTGCTTTTCATTTACCCTGAAGTTTATTTTAAGTGATTCAACATGATATTATGGTTGAAGTTCTGAATTCAAGACCACTTAAATCATATATAAACAATTTCTCAAATTTGAAAGCCTTAATTTAATTAAACAAAATGGATTCACCCACTTAAAAGTTTTTTTGTCCATCAATGTGACTTAAAGGTCATGTCTTTATTTTTATTTTTATTGGACCGAATATTAAACTTTGATACATATTATTAGATAGCGTAGACATCTAGCCAATTAGTGATACCATGATGTAATATGAATCATGCTATGAAGGACCTTAATTCAAGTCTCTGTCCAATCTTTTCTTCTGATCTCCATTAAATGCAATTCTAACCATTGCCCTTTTCATTTCAGCACGGTTCGTGAGCGGCCTGGCCGTGAATGTTTATCTAAAGGACAAAATTTTCCCCTTTCTAAAAGATGAGCCATTCTCGGTGGTGTACATTCACACAGACGTTCATTGGACAGAGAATTTCCCAGGAATCTCCAATCTGAAGGCAATCTATGAGGCAATTCCAATCACCATTAAGAGCAACATTGAAGCTGTCTATTTTGTCCACCCGGGTTTGCAGGCCCGTCTGTTCTTCGCCACCGTCGGCCGCCCTCGTGCTCGACGCCGAGTAAGGATATTCTTCATCTTCCTCCCATTGTAGAAAATGGCAAAAAGGTAAAATCTTGAAGGTGGGGTTTTTGAATTTTGTGTGTTTTTGACTTGCAGGGTATACAACAAGGTGAAATATGTGAAAAGGCTGGAGTTTTTGTGGGATTTTGTGAGAAGGAAAGAAATGGAGTTGCCTGAATTTGTGTATGATCATGATGAGAAATTGGAGCTTTGTTCTGTGATGAAGAACTCTGGTTTGGAGAATGATTATCTGCGAGTCTTCTCCGCCTTGTCGTCTGTCGATTCCGCGGTTTCGACTTACTCCATGAGGTGTTTTGCTTGATGATGAAGAAAACTTTAAATGTTGTAATTGACTAAGTTATAGACTTTCTGTAGGCAAAGTTGGGGTCTTTTTCTGAGCTTTGCTTGTGAAGAAAGGCACAGTTAGAACTTCATGGGAGATGCAGTTATAAATGAAGGTGTTACTGGTTTTTAAACTATATTGCTGTTCATCTTTGAATATAATATTTGTTCATGTCAGATTTGTAAATAACGAGAATTAGAAACAGAAAATTAAAATGAACAAGTTTAAATTATGTAGAAGAGTTTGATTGGGT GTACTTGTAACTTTTCATCATGAAATCTTCTTCTTCTTCTTCTTCTTGTTTTTCTCTTTCCGACCAACTTCACCTCCTCGGAAAAGTCGAGGTTTTTAAACTTCATGGTCGTGATAAATCCTCCCGCAATGTCCTCCTCATTGTTGCAAAATACTTTCCAGCACGGTTCGTGAGCGGCCTGGCCGTGAATGTTTATCTAAAGGACAAAATTTTCCCCTTTCTAAAAGATGAGCCATTCTCGGTGGTGTACATTCACACAGACGTTCATTGGACAGAGAATTTCCCAGGAATCTCCAATCTGAAGGCAATCTATGAGGCAATTCCAATCACCATTAAGAGCAACATTGAAGCTGTCTATTTTGTCCACCCGGGTTTGCAGGCCCGTCTGTTCTTCGCCACCGTCGGCCGCCCTCGTGCTCGACGCCGAGGTATACAACAAGGTGAAATATGTGAAAAGGCTGGAGTTTTTGTGGGATTTTGTGAGAAGGAAAGAAATGGAGTTGCCTGAATTTGTGTATGATCATGATGAGAAATTGGAGCTTTGTTCTGTGATGAAGAACTCTGGTTTGGAGAATGATTATCTGCGAGTCTTCTCCGCCTTGTCGTCTGTCGATTCCGCGGTTTCGACTTACTCCATGAGGTGTTTTGCTTGATGATGAAGAAAACTTTAAATGTTGTAATTGACTAAGTTATAGACTTTCTGTAGGCAAAGTTGGGGTCTTTTTCTGAGCTTTGCTTGTGAAGAAAGGCACAGTTAGAACTTCATGGGAGATGCAGTTATAAATGAAGGTGTTACTGGTTTTTAAACTATATTGCTGTTCATCTTTGAATATAATATTTGTTCATGTCAGATTTGTAAATAACGAGAATTAGAAACAGAAAATTAAAATGAACAAGTTTAAATTATGTAGAAGAGTTTGATTGGGT ATGAAATCTTCTTCTTCTTCTTCTTCTTGTTTTTCTCTTTCCGACCAACTTCACCTCCTCGGAAAAGTCGAGGTTTTTAAACTTCATGGTCGTGATAAATCCTCCCGCAATGTCCTCCTCATTGTTGCAAAATACTTTCCAGCACGGTTCGTGAGCGGCCTGGCCGTGAATGTTTATCTAAAGGACAAAATTTTCCCCTTTCTAAAAGATGAGCCATTCTCGGTGGTGTACATTCACACAGACGTTCATTGGACAGAGAATTTCCCAGGAATCTCCAATCTGAAGGCAATCTATGAGGCAATTCCAATCACCATTAAGAGCAACATTGAAGCTGTCTATTTTGTCCACCCGGGTTTGCAGGCCCGTCTGTTCTTCGCCACCGTCGGCCGCCCTCGTGCTCGACGCCGAGGTATACAACAAGGTGAAATATGTGAAAAGGCTGGAGTTTTTGTGGGATTTTGTGAGAAGGAAAGAAATGGAGTTGCCTGA MKSSSSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARLFFATVGRPRARRRGIQQGEICEKAGVFVGFCEKERNGVA Homology
BLAST of Sed0012966 vs. NCBI nr
Match: XP_031737047.1 (ganglioside-induced differentiation-associated-protein 2-like [Cucumis sativus] >KGN62279.1 hypothetical protein Csa_018770 [Cucumis sativus]) HSP 1 Score: 219.2 bits (557), Expect = 2.7e-53 Identity = 108/126 (85.71%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of Sed0012966 vs. NCBI nr
Match: XP_038884815.1 (ganglioside-induced differentiation-associated protein 2-like [Benincasa hispida]) HSP 1 Score: 218.0 bits (554), Expect = 5.9e-53 Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0
BLAST of Sed0012966 vs. NCBI nr
Match: KAG6598524.1 (Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 217.6 bits (553), Expect = 7.8e-53 Identity = 107/128 (83.59%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of Sed0012966 vs. NCBI nr
Match: XP_016899965.1 (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Cucumis melo]) HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52 Identity = 106/123 (86.18%), Postives = 112/123 (91.06%), Query Frame = 0
BLAST of Sed0012966 vs. NCBI nr
Match: KAG7029460.1 (Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 216.5 bits (550), Expect = 1.7e-52 Identity = 106/127 (83.46%), Postives = 115/127 (90.55%), Query Frame = 0
BLAST of Sed0012966 vs. ExPASy Swiss-Prot
Match: A7T167 (Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 6.3e-05 Identity = 36/103 (34.95%), Postives = 55/103 (53.40%), Query Frame = 0
BLAST of Sed0012966 vs. ExPASy TrEMBL
Match: A0A0A0LML6 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G348170 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53 Identity = 108/126 (85.71%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of Sed0012966 vs. ExPASy TrEMBL
Match: A0A1S4DW79 (ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC107990288 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 6.4e-53 Identity = 106/123 (86.18%), Postives = 112/123 (91.06%), Query Frame = 0
BLAST of Sed0012966 vs. ExPASy TrEMBL
Match: A0A5A7VHB1 (Ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001720 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.9e-52 Identity = 105/122 (86.07%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of Sed0012966 vs. ExPASy TrEMBL
Match: A0A6J1KC43 (protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491951 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.3e-50 Identity = 99/119 (83.19%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of Sed0012966 vs. ExPASy TrEMBL
Match: A0A6J1CST5 (uncharacterized protein LOC111013979 OS=Momordica charantia OX=3673 GN=LOC111013979 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.9e-49 Identity = 101/128 (78.91%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of Sed0012966 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein ) HSP 1 Score: 147.1 bits (370), Expect = 1.2e-35 Identity = 68/123 (55.28%), Postives = 94/123 (76.42%), Query Frame = 0
BLAST of Sed0012966 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein ) HSP 1 Score: 99.0 bits (245), Expect = 3.7e-21 Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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