Sed0012966 (gene) Chayote v1

Overview


Name	Sed0012966
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CRAL-TRIO domain-containing protein
Location	LG11: 26858409 .. 26859888 (+)
RNA-Seq Expression	Sed0012966
Synteny	Sed0012966

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTACTTGTAACTTTTCATCATGAAATCTTCTTCTTCTTCTTCTTCTTGTTTTTCTCTTTCCGACCAACTTCACCTCCTCGGAAAAGTCGAGGTTTTTAAACTTCATGGTCGTGATAAATCCTCCCGCAATGTCCTCCTCATTGTTGCAAAATACTTTCCAGGTACACACCACCTACGAATATTGCATTACCTTTTACAGAGTTTAATGCATCTCTGTTTTATTATATGGCTTCTGCTTTTCATTTACCCTGAAGTTTATTTTAAGTGATTCAACATGATATTATGGTTGAAGTTCTGAATTCAAGACCACTTAAATCATATATAAACAATTTCTCAAATTTGAAAGCCTTAATTTAATTAAACAAAATGGATTCACCCACTTAAAAGTTTTTTTGTCCATCAATGTGACTTAAAGGTCATGTCTTTATTTTTATTTTTATTGGACCGAATATTAAACTTTGATACATATTATTAGATAGCGTAGACATCTAGCCAATTAGTGATACCATGATGTAATATGAATCATGCTATGAAGGACCTTAATTCAAGTCTCTGTCCAATCTTTTCTTCTGATCTCCATTAAATGCAATTCTAACCATTGCCCTTTTCATTTCAGCACGGTTCGTGAGCGGCCTGGCCGTGAATGTTTATCTAAAGGACAAAATTTTCCCCTTTCTAAAAGATGAGCCATTCTCGGTGGTGTACATTCACACAGACGTTCATTGGACAGAGAATTTCCCAGGAATCTCCAATCTGAAGGCAATCTATGAGGCAATTCCAATCACCATTAAGAGCAACATTGAAGCTGTCTATTTTGTCCACCCGGGTTTGCAGGCCCGTCTGTTCTTCGCCACCGTCGGCCGCCCTCGTGCTCGACGCCGAGTAAGGATATTCTTCATCTTCCTCCCATTGTAGAAAATGGCAAAAAGGTAAAATCTTGAAGGTGGGGTTTTTGAATTTTGTGTGTTTTTGACTTGCAGGGTATACAACAAGGTGAAATATGTGAAAAGGCTGGAGTTTTTGTGGGATTTTGTGAGAAGGAAAGAAATGGAGTTGCCTGAATTTGTGTATGATCATGATGAGAAATTGGAGCTTTGTTCTGTGATGAAGAACTCTGGTTTGGAGAATGATTATCTGCGAGTCTTCTCCGCCTTGTCGTCTGTCGATTCCGCGGTTTCGACTTACTCCATGAGGTGTTTTGCTTGATGATGAAGAAAACTTTAAATGTTGTAATTGACTAAGTTATAGACTTTCTGTAGGCAAAGTTGGGGTCTTTTTCTGAGCTTTGCTTGTGAAGAAAGGCACAGTTAGAACTTCATGGGAGATGCAGTTATAAATGAAGGTGTTACTGGTTTTTAAACTATATTGCTGTTCATCTTTGAATATAATATTTGTTCATGTCAGATTTGTAAATAACGAGAATTAGAAACAGAAAATTAAAATGAACAAGTTTAAATTATGTAGAAGAGTTTGATTGGGT

mRNA sequence

GTACTTGTAACTTTTCATCATGAAATCTTCTTCTTCTTCTTCTTCTTGTTTTTCTCTTTCCGACCAACTTCACCTCCTCGGAAAAGTCGAGGTTTTTAAACTTCATGGTCGTGATAAATCCTCCCGCAATGTCCTCCTCATTGTTGCAAAATACTTTCCAGCACGGTTCGTGAGCGGCCTGGCCGTGAATGTTTATCTAAAGGACAAAATTTTCCCCTTTCTAAAAGATGAGCCATTCTCGGTGGTGTACATTCACACAGACGTTCATTGGACAGAGAATTTCCCAGGAATCTCCAATCTGAAGGCAATCTATGAGGCAATTCCAATCACCATTAAGAGCAACATTGAAGCTGTCTATTTTGTCCACCCGGGTTTGCAGGCCCGTCTGTTCTTCGCCACCGTCGGCCGCCCTCGTGCTCGACGCCGAGGTATACAACAAGGTGAAATATGTGAAAAGGCTGGAGTTTTTGTGGGATTTTGTGAGAAGGAAAGAAATGGAGTTGCCTGAATTTGTGTATGATCATGATGAGAAATTGGAGCTTTGTTCTGTGATGAAGAACTCTGGTTTGGAGAATGATTATCTGCGAGTCTTCTCCGCCTTGTCGTCTGTCGATTCCGCGGTTTCGACTTACTCCATGAGGTGTTTTGCTTGATGATGAAGAAAACTTTAAATGTTGTAATTGACTAAGTTATAGACTTTCTGTAGGCAAAGTTGGGGTCTTTTTCTGAGCTTTGCTTGTGAAGAAAGGCACAGTTAGAACTTCATGGGAGATGCAGTTATAAATGAAGGTGTTACTGGTTTTTAAACTATATTGCTGTTCATCTTTGAATATAATATTTGTTCATGTCAGATTTGTAAATAACGAGAATTAGAAACAGAAAATTAAAATGAACAAGTTTAAATTATGTAGAAGAGTTTGATTGGGT

Coding sequence (CDS)

ATGAAATCTTCTTCTTCTTCTTCTTCTTGTTTTTCTCTTTCCGACCAACTTCACCTCCTCGGAAAAGTCGAGGTTTTTAAACTTCATGGTCGTGATAAATCCTCCCGCAATGTCCTCCTCATTGTTGCAAAATACTTTCCAGCACGGTTCGTGAGCGGCCTGGCCGTGAATGTTTATCTAAAGGACAAAATTTTCCCCTTTCTAAAAGATGAGCCATTCTCGGTGGTGTACATTCACACAGACGTTCATTGGACAGAGAATTTCCCAGGAATCTCCAATCTGAAGGCAATCTATGAGGCAATTCCAATCACCATTAAGAGCAACATTGAAGCTGTCTATTTTGTCCACCCGGGTTTGCAGGCCCGTCTGTTCTTCGCCACCGTCGGCCGCCCTCGTGCTCGACGCCGAGGTATACAACAAGGTGAAATATGTGAAAAGGCTGGAGTTTTTGTGGGATTTTGTGAGAAGGAAAGAAATGGAGTTGCCTGA

Protein sequence

MKSSSSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARLFFATVGRPRARRRGIQQGEICEKAGVFVGFCEKERNGVA

Homology

[Close]

BLAST of Sed0012966 vs. NCBI nr
Match: XP_031737047.1 (ganglioside-induced differentiation-associated-protein 2-like [Cucumis sativus] >KGN62279.1 hypothetical protein Csa_018770 [Cucumis sativus])

HSP 1 Score: 219.2 bits (557), Expect = 2.7e-53
Identity = 108/126 (85.71%), Postives = 114/126 (90.48%), Query Frame = 0


Query: 5   SSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKI 64
           S SSS  SLSDQLHLLGKVEVF+LHGRDK+ RNVLLIV KYFPARFVS  AVNVYLKDKI
Sbjct: 2   SYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKI 61

Query: 65  FPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARLF 124
           FP LKD PF+VVYIHTDVHWTEN PGISNLKAIYEAIPITIK+NIEAVYF+HP LQ R+F
Sbjct: 62  FPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVF 121

Query: 125 FATVGR 131
           FATVGR
Sbjct: 122 FATVGR 127

[Close]

BLAST of Sed0012966 vs. NCBI nr
Match: XP_038884815.1 (ganglioside-induced differentiation-associated protein 2-like [Benincasa hispida])

HSP 1 Score: 218.0 bits (554), Expect = 5.9e-53
Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 8   SSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPF 67
           SS   LSDQLHLL KVEVFKLHGRDK+ RNVLLIV KYFPARFVS  AVNVYLKDKIFPF
Sbjct: 4   SSSPPLSDQLHLLEKVEVFKLHGRDKARRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPF 63

Query: 68  LKDE-PFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARLFFA 127
           LKD+ PF+VVYIHTDVHWTENFPGISNLKAIYEAIPITIK NIEAVYF+HPGLQAR+FFA
Sbjct: 64  LKDDGPFTVVYIHTDVHWTENFPGISNLKAIYEAIPITIKKNIEAVYFLHPGLQARMFFA 123

Query: 128 TVGR 131
           TVGR
Sbjct: 124 TVGR 127

[Close]

BLAST of Sed0012966 vs. NCBI nr
Match: KAG6598524.1 (Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 217.6 bits (553), Expect = 7.8e-53
Identity = 107/128 (83.59%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 3   SSSSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKD 62
           SSSSSSS  SLSDQLHLLGK EVFKLHGRD++ RNV LIV K+FPARFVS  AVN+YLKD
Sbjct: 6   SSSSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKD 65

Query: 63  KIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQAR 122
           KIFPFLKD PF++VYIHTDVHWTENFPGISNLKAIYE IP TIK+N++AVYFVHP LQAR
Sbjct: 66  KIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPSLQAR 125

Query: 123 LFFATVGR 131
           LFFATVGR
Sbjct: 126 LFFATVGR 133

[Close]

BLAST of Sed0012966 vs. NCBI nr
Match: XP_016899965.1 (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52
Identity = 106/123 (86.18%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 8   SSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPF 67
           SS  SLSDQLHLLGKVEVF+LHGRDK+ RNVLLIV KYFPARFVS  AVNVYLKDKIFP 
Sbjct: 4   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 63

Query: 68  LKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARLFFAT 127
           LKD PF+VVYIHTDVHWTEN PGISNLKAIYEAIPITIK+NIEAVYF+HP LQ R+FFAT
Sbjct: 64  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 123

Query: 128 VGR 131
           VGR
Sbjct: 124 VGR 126

[Close]

BLAST of Sed0012966 vs. NCBI nr
Match: KAG7029460.1 (Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.5 bits (550), Expect = 1.7e-52
Identity = 106/127 (83.46%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 4   SSSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDK 63
           SSSSSS  SLSDQLHLLGK EVFKLHGRD++ RNV LIV K+FPARFVS  AVN+YLKDK
Sbjct: 6   SSSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDK 65

Query: 64  IFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARL 123
           IFPFLKD PF++VYIHTDVHWTENFPGISNLKAIYE IP TIK+N++AVYFVHP LQARL
Sbjct: 66  IFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPSLQARL 125

Query: 124 FFATVGR 131
           FFATVGR
Sbjct: 126 FFATVGR 132

[Close]

BLAST of Sed0012966 vs. ExPASy Swiss-Prot
Match: A7T167 (Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 6.3e-05
Identity = 36/103 (34.95%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 30  GRDKSSRNVLLIVAKYFPARFVS-GLAVNVYLKDKIFPFLKDEPFSVVYIHTDVHWT-EN 89
           G D   R V++ VA++F A+    G AV  ++   +   + +  + VVY HT  H T EN
Sbjct: 346 GVDFLGRPVVVFVARHFTAQNTDLGKAVAYFI--SVLDRIVNRDYVVVYFHT--HSTEEN 405

Query: 90  FPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARL---FFAT 128
            P +S LK +Y  +    + N++A Y VHP + AR+   FF T
Sbjct: 406 QPPMSFLKELYHIVDNKYRRNLKAFYIVHPTVWARIVTWFFTT 444

[Close]

BLAST of Sed0012966 vs. ExPASy TrEMBL
Match: A0A0A0LML6 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G348170 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53
Identity = 108/126 (85.71%), Postives = 114/126 (90.48%), Query Frame = 0


Query: 5   SSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKI 64
           S SSS  SLSDQLHLLGKVEVF+LHGRDK+ RNVLLIV KYFPARFVS  AVNVYLKDKI
Sbjct: 2   SYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKI 61

Query: 65  FPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARLF 124
           FP LKD PF+VVYIHTDVHWTEN PGISNLKAIYEAIPITIK+NIEAVYF+HP LQ R+F
Sbjct: 62  FPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVF 121

Query: 125 FATVGR 131
           FATVGR
Sbjct: 122 FATVGR 127

[Close]

BLAST of Sed0012966 vs. ExPASy TrEMBL
Match: A0A1S4DW79 (ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC107990288 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 6.4e-53
Identity = 106/123 (86.18%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 8   SSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPF 67
           SS  SLSDQLHLLGKVEVF+LHGRDK+ RNVLLIV KYFPARFVS  AVNVYLKDKIFP 
Sbjct: 4   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 63

Query: 68  LKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARLFFAT 127
           LKD PF+VVYIHTDVHWTEN PGISNLKAIYEAIPITIK+NIEAVYF+HP LQ R+FFAT
Sbjct: 64  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 123

Query: 128 VGR 131
           VGR
Sbjct: 124 VGR 126

[Close]

BLAST of Sed0012966 vs. ExPASy TrEMBL
Match: A0A5A7VHB1 (Ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001720 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.9e-52
Identity = 105/122 (86.07%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 9   SCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFL 68
           S  SLSDQLHLLGKVEVF+LHGRDK+ RNVLLIV KYFPARFVS  AVNVYLKDKIFP L
Sbjct: 4   SSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLL 63

Query: 69  KDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARLFFATV 128
           KD PF+VVYIHTDVHWTEN PGISNLKAIYEAIPITIK+NIEAVYF+HP LQ R+FFATV
Sbjct: 64  KDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATV 123

Query: 129 GR 131
           GR
Sbjct: 124 GR 125

[Close]

BLAST of Sed0012966 vs. ExPASy TrEMBL
Match: A0A6J1KC43 (protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491951 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.3e-50
Identity = 99/119 (83.19%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 12  SLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDE 71
           SLSDQLHLLGK EVFKLHGRD++ RNV LIV K+FPARFVS  AVN+YLKDKIFPF+KD 
Sbjct: 8   SLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFVKDG 67

Query: 72  PFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARLFFATVGR 131
           PF++VYIHTDVHWTENFPGISNLKAIYE IP  IK+N++AVYFVHPGLQARLFFATVGR
Sbjct: 68  PFTLVYIHTDVHWTENFPGISNLKAIYEFIPTNIKNNLKAVYFVHPGLQARLFFATVGR 126

[Close]

BLAST of Sed0012966 vs. ExPASy TrEMBL
Match: A0A6J1CST5 (uncharacterized protein LOC111013979 OS=Momordica charantia OX=3673 GN=LOC111013979 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.9e-49
Identity = 101/128 (78.91%), Postives = 113/128 (88.28%), Query Frame = 0


Query: 3   SSSSSSSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKD 62
           +SSSS S  SL DQLHLL KVEVF LHGRDK+ RNVLLIV KYFPARFVS  AV+ YLKD
Sbjct: 2   NSSSSISSLSLPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLKD 61

Query: 63  KIFPFLKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQAR 122
           KIFP LK+ PF+VVY+HTDVHWTENFPG+S LKAI +AIPIT+K++IEAVYFVHPGLQ+R
Sbjct: 62  KIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQSR 121

Query: 123 LFFATVGR 131
           LFFATVGR
Sbjct: 122 LFFATVGR 129

[Close]

BLAST of Sed0012966 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-35
Identity = 68/123 (55.28%), Postives = 94/123 (76.42%), Query Frame = 0


Query: 8   SSCFSLSDQLHLLGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPF 67
           SS  S  +Q  L+ K+E+FK+HGRDK  R +L I+ K+FPARF+S   +  YL++KIFP 
Sbjct: 2   SSQISEIEQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPR 61

Query: 68  LKDEPFSVVYIHTDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARLFFAT 127
           L  +PF+V+Y+HT V  +ENFPGIS L+AIY+AIP+ ++ N++ VYF+HPGLQ+RLF AT
Sbjct: 62  LGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLAT 121

Query: 128 VGR 131
            GR
Sbjct: 122 CGR 124

[Close]

BLAST of Sed0012966 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 99.0 bits (245), Expect = 3.7e-21
Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 20  LGKVEVFKLHGRDKSSRNVLLIVAKYFPARFVSGLAVNVYLKDKIFPFLKDEPFSVVYIH 79
           L  ++ F L G D+S   +  IV KYFPAR VS   +  Y+  KI     + P  +VY+H
Sbjct: 49  LDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMH 108

Query: 80  TDVHWTENFPGISNLKAIYEAIPITIKSNIEAVYFVHPGLQARLFFATVGR 131
           + V   +N PGI+ L+ IYE +P  IK  ++ VYF+HPGL++RL  AT+GR
Sbjct: 109 STVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGR 159

The following BLAST results are available for this feature:

BLAST of Sed0012966 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737047.1	2.7e-53	85.71	ganglioside-induced differentiation-associated-protein 2-like [Cucumis sativus] ...	[more]
XP_038884815.1	5.9e-53	87.90	ganglioside-induced differentiation-associated protein 2-like [Benincasa hispida...	[more]
KAG6598524.1	7.8e-53	83.59	Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_016899965.1	1.3e-52	86.18	PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Cucumi...	[more]
KAG7029460.1	1.7e-52	83.46	Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0012966 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7T167	6.3e-05	34.95	Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1	[more]

BLAST of Sed0012966 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LML6	1.3e-53	85.71	CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G348170 P...	[more]
A0A1S4DW79	6.4e-53	86.18	ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo OX...	[more]
A0A5A7VHB1	1.9e-52	86.07	Ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo va...	[more]
A0A6J1KC43	1.3e-50	83.19	protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491951 PE=4 SV=1	[more]
A0A6J1CST5	1.9e-49	78.91	uncharacterized protein LOC111013979 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Sed0012966 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35750.1	1.2e-35	55.28	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT3G10210.1	3.7e-21	43.24	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036865	CRAL-TRIO lipid binding domain superfamily	GENE3D	3.40.525.10		coord: 15..140 e-value: 1.4E-13 score: 52.8
IPR001251	CRAL-TRIO lipid binding domain	PFAM	PF13716	CRAL_TRIO_2	coord: 36..132 e-value: 1.2E-14 score: 54.8
None	No IPR available	PANTHER	PTHR11106	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	coord: 3..130
None	No IPR available	PANTHER	PTHR11106:SF101	PROTEIN, PUTATIVE-RELATED	coord: 3..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012966.1	Sed0012966.1	mRNA