Sed0012904 (gene) Chayote v1

Overview


Name	Sed0012904
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG10: 6707808 .. 6710652 (-)
RNA-Seq Expression	Sed0012904
Synteny	Sed0012904

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCTTGAACTTCGATAAATTTGCGCAATCCCCATTTCTTCATCGAATTTTGGTATCCGCTTCCCCAAATCTCCTTCCACTAACATACACAGTAGTAATGCCCCTTTCAATTTCCCTGCAATTTTCTTCCACATTTACTCCATCTTCTTCTTCCCCAAATTCCCAACTCTCTCGGCCATGGCTTCCACGACCAAGCTCTCTAAGAACGGCCGTTCCGACCCGAGTGGTCTGCGTTTCGACCCGACCCATGAAGAAATCCGCGCCGAAAACCGACCGGTCGGAGGCTGAAGAACTGGTTCGCGATGTTTTCAGAAAGTTCAGCGACAAGGAACCGTTGCTCAAGACATTGGACAAGTACGTCCGTGTTGTGAGAACGGAGCATTGTTTTCTTCTGTTTGAGGAGTTGGGGAAAAGGGATAAATGGCTTCAGTGCCTCGAGGTTTGATTTTCTTCTTTGGAACTATGAATTTGAGCTTCTGGGTGTTGGTTTTTTCAACTTGTTTTGGCTGTTTGTTGAGTACTTATAGATGGGTATGGATGAAATTTGTAAACTGTACACATTTTGGTGAAATGTTTGAAATGAATGGAGTTTGCAATGTAGTTCAAGTTCTATTTGGCATGGATGAAGAATGGGGATCTAAAAAAATTATTTGGGTGAGTATCTCATATTACATAAGTGGACTCCAACATTTATAAGATAGGTGAGTTATTGCTCTTACTCTTAATTGGTTTTGACACGGAACTTATACTATATAATTTAGTATGAGAGTTCATTCAATTAAAGGGGATTCAGTCTACAGATTTAGATCCAACTAAGATGGGTGAATTTGGTCCCCAAGGGGTGGCACAGTGGTTGAAGATTTGGGCTTTGAGGTATGCTCCCCTCAAAGTCCCAGGTTCGAGACTCAGCTGTGTCATTACTCCTTCAATGTCTCTCGGTGCCTGGCATAGGGACGGACGTGGTTACCCTTGTTTCAAAAAAAAAATGGATGAATCCGAAGAAGCATTCATTTTGAAGGGCTTGGTGTGAATGCATTGGAAAAATGAAAAGACCTTGCATTTATAAGATAAAGTGGACTATTAATCTCATCATCGATTGATTTTTAGATGAAATCTCGTACGATCGAATATGTTATTTATAAAATTGGCATTAGATCAAGATTGGTAAACCCAAAAGAAGTACCATCTTAAAGGATATGTTAGAAATCTCACATTAGAAAAGTTAGAAAACCTCCTAACATTTATAAGATTGGTTCTCGTTCTCATTGTGATTTTGAGATGAACTCATGCTATCTAATAGGTGGCTGGGACTAAAGAAGCAAAGAAATTGTAGCTCTGTTATTGATTGTGGACAAATGTGAAAGAGAATCATGAATATTTTTTATGATGTAATTCATTTTCAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATACAGCTGACAATGGGGTTTATTCAAAACTAATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCCATGTGGCTCTTTTCTGAGATGCGAAATAGCGGGTGTCGACCCGATACTTCTGTTTACAATTCACTCATCACAGCCCATCTTCATTCCAAGGACAAAGCAAAGGCTTTGGATAAAGTTCTTTGGTACTTTGAGAAAATGAAAGGAATGGATCGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCCTTTGCTCAAGCTGGAAAAGTGGAACAAGTTGAAATATTGTTTAAAGATCTTGATGAGAGCATTGTTTCAGCTGATATATATACATATAATGGAGTGATGGATGCATTTGGGAAGAATGGGATGATCAAAGAGATGGAATTGATGCTTTCTCGGATGAAAAGCAATCAAATTAAACCAGATATCATAACCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGCTATTTGAGAAGATGGAACAGGTGTTCAAGAGCTTATTACGATCGAAGGAGAGGCCGACTCTGCCAACTTTCAATTCGATGATCACGAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAAGTTTTTAGGAAGATGAAGGATATGGGATTTAACCCAAGCTATATCACTTGTGAAAGTTTAATCATGATGTATGGCCACTGTGACTCTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAGTTCTGGGAAGGACATTCGAGTCTCAACCCTCAATTCCATGCTCGATGTTTACTGCATGAATGGGTTGCCCGTGGAAGCCGATTCACTTTTCGATAGTGCGAGTAGTATGAGGGTGTTACCAGATTCAACAACATACAAGCTTCTGTATAAAGCTTACACCAAAGCTGATGTGAAGGAACTTCTGGAGAAGCTGTTGAAGAACATGGACAAAGCTGGCATCATTCCTAATAAGAGATTCTTCCTGGATGCTTTGGGAACTGTTGGATCTTCACCAGAAAAACGAGTACCTGCAAGAACTCGAACAGGTTCAAGAAACTCAGAAAGAAGTGTGGAAAAACCAGCATCTGCAAGAACTAAGACAGGTTCAAGAAACTTTGAAAGTAACTTGAAAAACCAGGCTGCTGCATAGTTAGGTTAGTTTGAAAAATTTTGTAGTCAATCTTCATTCTTTTGAAGCTTCTTTACTTCTCCTATTGTTGAAAGCTGTGGCAGTTCTACCAAAATTACAGTGTTGTGGAGTGTTAACGAGAAGCCAAAATTTTGTACATATGTTCATTCCTCTTATGGAAATTTATCAATTTGATTACATTTCGTTTATCACAAAGTTTGAGATACATATGAAAACTGAGCAAGTGGTTTCGACCTGTGGAATATATGGATAAATTTGTT

mRNA sequence

GTCCTTGAACTTCGATAAATTTGCGCAATCCCCATTTCTTCATCGAATTTTGGTATCCGCTTCCCCAAATCTCCTTCCACTAACATACACAGTAGTAATGCCCCTTTCAATTTCCCTGCAATTTTCTTCCACATTTACTCCATCTTCTTCTTCCCCAAATTCCCAACTCTCTCGGCCATGGCTTCCACGACCAAGCTCTCTAAGAACGGCCGTTCCGACCCGAGTGGTCTGCGTTTCGACCCGACCCATGAAGAAATCCGCGCCGAAAACCGACCGGTCGGAGGCTGAAGAACTGGTTCGCGATGTTTTCAGAAAGTTCAGCGACAAGGAACCGTTGCTCAAGACATTGGACAAGTACGTCCGTGTTGTGAGAACGGAGCATTGTTTTCTTCTGTTTGAGGAGTTGGGGAAAAGGGATAAATGGCTTCAGTGCCTCGAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATACAGCTGACAATGGGGTTTATTCAAAACTAATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCCATGTGGCTCTTTTCTGAGATGCGAAATAGCGGGTGTCGACCCGATACTTCTGTTTACAATTCACTCATCACAGCCCATCTTCATTCCAAGGACAAAGCAAAGGCTTTGGATAAAGTTCTTTGGTACTTTGAGAAAATGAAAGGAATGGATCGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCCTTTGCTCAAGCTGGAAAAGTGGAACAAGTTGAAATATTGTTTAAAGATCTTGATGAGAGCATTGTTTCAGCTGATATATATACATATAATGGAGTGATGGATGCATTTGGGAAGAATGGGATGATCAAAGAGATGGAATTGATGCTTTCTCGGATGAAAAGCAATCAAATTAAACCAGATATCATAACCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGCTATTTGAGAAGATGGAACAGGTGTTCAAGAGCTTATTACGATCGAAGGAGAGGCCGACTCTGCCAACTTTCAATTCGATGATCACGAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAAGTTTTTAGGAAGATGAAGGATATGGGATTTAACCCAAGCTATATCACTTGTGAAAGTTTAATCATGATGTATGGCCACTGTGACTCTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAGTTCTGGGAAGGACATTCGAGTCTCAACCCTCAATTCCATGCTCGATGTTTACTGCATGAATGGGTTGCCCGTGGAAGCCGATTCACTTTTCGATAGTGCGAGTAGTATGAGGGTGTTACCAGATTCAACAACATACAAGCTTCTGTATAAAGCTTACACCAAAGCTGATGTGAAGGAACTTCTGGAGAAGCTGTTGAAGAACATGGACAAAGCTGGCATCATTCCTAATAAGAGATTCTTCCTGGATGCTTTGGGAACTGTTGGATCTTCACCAGAAAAACGAGTACCTGCAAGAACTCGAACAGGTTCAAGAAACTCAGAAAGAAGTGTGGAAAAACCAGCATCTGCAAGAACTAAGACAGGTTCAAGAAACTTTGAAAGTAACTTGAAAAACCAGGCTGCTGCATAGTTAGGTTAGTTTGAAAAATTTTGTAGTCAATCTTCATTCTTTTGAAGCTTCTTTACTTCTCCTATTGTTGAAAGCTGTGGCAGTTCTACCAAAATTACAGTGTTGTGGAGTGTTAACGAGAAGCCAAAATTTTGTACATATGTTCATTCCTCTTATGGAAATTTATCAATTTGATTACATTTCGTTTATCACAAAGTTTGAGATACATATGAAAACTGAGCAAGTGGTTTCGACCTGTGGAATATATGGATAAATTTGTT

Coding sequence (CDS)

ATGCCCCTTTCAATTTCCCTGCAATTTTCTTCCACATTTACTCCATCTTCTTCTTCCCCAAATTCCCAACTCTCTCGGCCATGGCTTCCACGACCAAGCTCTCTAAGAACGGCCGTTCCGACCCGAGTGGTCTGCGTTTCGACCCGACCCATGAAGAAATCCGCGCCGAAAACCGACCGGTCGGAGGCTGAAGAACTGGTTCGCGATGTTTTCAGAAAGTTCAGCGACAAGGAACCGTTGCTCAAGACATTGGACAAGTACGTCCGTGTTGTGAGAACGGAGCATTGTTTTCTTCTGTTTGAGGAGTTGGGGAAAAGGGATAAATGGCTTCAGTGCCTCGAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATACAGCTGACAATGGGGTTTATTCAAAACTAATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCCATGTGGCTCTTTTCTGAGATGCGAAATAGCGGGTGTCGACCCGATACTTCTGTTTACAATTCACTCATCACAGCCCATCTTCATTCCAAGGACAAAGCAAAGGCTTTGGATAAAGTTCTTTGGTACTTTGAGAAAATGAAAGGAATGGATCGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCCTTTGCTCAAGCTGGAAAAGTGGAACAAGTTGAAATATTGTTTAAAGATCTTGATGAGAGCATTGTTTCAGCTGATATATATACATATAATGGAGTGATGGATGCATTTGGGAAGAATGGGATGATCAAAGAGATGGAATTGATGCTTTCTCGGATGAAAAGCAATCAAATTAAACCAGATATCATAACCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGCTATTTGAGAAGATGGAACAGGTGTTCAAGAGCTTATTACGATCGAAGGAGAGGCCGACTCTGCCAACTTTCAATTCGATGATCACGAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAAGTTTTTAGGAAGATGAAGGATATGGGATTTAACCCAAGCTATATCACTTGTGAAAGTTTAATCATGATGTATGGCCACTGTGACTCTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAGTTCTGGGAAGGACATTCGAGTCTCAACCCTCAATTCCATGCTCGATGTTTACTGCATGAATGGGTTGCCCGTGGAAGCCGATTCACTTTTCGATAGTGCGAGTAGTATGAGGGTGTTACCAGATTCAACAACATACAAGCTTCTGTATAAAGCTTACACCAAAGCTGATGTGAAGGAACTTCTGGAGAAGCTGTTGAAGAACATGGACAAAGCTGGCATCATTCCTAATAAGAGATTCTTCCTGGATGCTTTGGGAACTGTTGGATCTTCACCAGAAAAACGAGTACCTGCAAGAACTCGAACAGGTTCAAGAAACTCAGAAAGAAGTGTGGAAAAACCAGCATCTGCAAGAACTAAGACAGGTTCAAGAAACTTTGAAAGTAACTTGAAAAACCAGGCTGCTGCATAG

Protein sequence

MPLSISLQFSSTFTPSSSSPNSQLSRPWLPRPSSLRTAVPTRVVCVSTRPMKKSAPKTDRSEAEELVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKDKAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADIYTYNGVMDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDSVSKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKLLYKAYTKADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSERSVEKPASARTKTGSRNFESNLKNQAAA

Homology

[Close]

BLAST of Sed0012904 vs. NCBI nr
Match: KAG7034169.1 (Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 869.8 bits (2246), Expect = 1.2e-248
Identity = 441/506 (87.15%), Postives = 472/506 (93.28%), Query Frame = 0


Query: 1   MPLSISLQFSSTFTP-SSSSPNSQLSRPWLPRPSSLRTAVPTRVVCVSTRPMKKSAPKTD 60
           MPLS SLQFS +FTP SSSS N QLS+ WLP P SLR AV TRVVC+STRP +KSA KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  RSEAEELVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVR V RKFSDKEPLLKTLDKYVRV+RTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKD 180
           QKQRWY ADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYN+LITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADI 240
           KAKAL KVLWYFEKMKGM+RCKPN+VTYNILTRAFAQAGKV+QV  LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDA+GKNGMIKEME ML+RMKSN+IKPDII+FNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDS 360
           LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMG++PSY+TCESLIMMYGHCD 
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKL 420
           VSKAREIFDGMV+SGK +RVSTLN+MLDVYCMNGLP+EAD LF+SASSM+V PDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEK  PART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 RSVEKPASARTKTGSRNFESNLKNQA 506
            SVEKP S+R + GSR  ES++KN A
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHA 506

[Close]

BLAST of Sed0012904 vs. NCBI nr
Match: KAG6604006.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 867.8 bits (2241), Expect = 4.5e-248
Identity = 440/506 (86.96%), Postives = 472/506 (93.28%), Query Frame = 0


Query: 1   MPLSISLQFSSTFTP-SSSSPNSQLSRPWLPRPSSLRTAVPTRVVCVSTRPMKKSAPKTD 60
           MPLS SLQFS +FTP SSSS N QLS+ WLP P SLR AV TRVVC+STRP +KSA KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  RSEAEELVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVR V RKFSDKEPLLKTLDKYVRV+RTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKD 180
           QKQRWY ADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYN+LITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADI 240
           KAKAL KVLWYFEKMKGM+RCKPN+VTYNILTRAFAQAGKV+QV  LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDA+GKNGMIKEME ML+RMKSN+IKPDII+FNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDS 360
           LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMG++PSY+TCESLIMMYGHCD 
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKL 420
           VSKAREIF+GMV+SGK +RVSTLN+MLDVYCMNGLP+EAD LF+SASSM+V PDSTTYKL
Sbjct: 361 VSKAREIFNGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEK  PART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 RSVEKPASARTKTGSRNFESNLKNQA 506
            SVEKP S+R + GSR  ES++KN A
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHA 506

[Close]

BLAST of Sed0012904 vs. NCBI nr
Match: XP_023543919.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 867.1 bits (2239), Expect = 7.6e-248
Identity = 439/506 (86.76%), Postives = 471/506 (93.08%), Query Frame = 0


Query: 1   MPLSISLQFSSTFTP-SSSSPNSQLSRPWLPRPSSLRTAVPTRVVCVSTRPMKKSAPKTD 60
           MPLS SLQFS +FTP SSSS N QLS+ WLP P SLR AV TRVVC+STRP +KS  KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60

Query: 61  RSEAEELVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVR V RKFSDKEPLLKTLDKYVRV+RTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKD 180
           QKQRWY ADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYN+LITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADI 240
           KAKAL KVLWYFEKMKGM+RCKPN+VTYNILTRAFAQAGKV+QV  LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDA+GKNGMIKEME ML+RMKSN+IKPDII+FNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDS 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEEVFRKMKDMG++PSY+TCESLIMMYGHCD 
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKL 420
           VSKAREIFDGMV+SGK +RVSTLN+MLDVYCMNGLP+EAD LF+SASSM+V PDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEK  PART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 RSVEKPASARTKTGSRNFESNLKNQA 506
            SVEKP S+R + GSR  ES++KN A
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHA 506

[Close]

BLAST of Sed0012904 vs. NCBI nr
Match: XP_022950765.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita moschata])

HSP 1 Score: 867.1 bits (2239), Expect = 7.6e-248
Identity = 439/506 (86.76%), Postives = 471/506 (93.08%), Query Frame = 0


Query: 1   MPLSISLQFSSTFTP-SSSSPNSQLSRPWLPRPSSLRTAVPTRVVCVSTRPMKKSAPKTD 60
           MPLS SLQFS +FTP SSSS N QLS+ WLP P SLR AV TRVVC+STRP +KSA KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  RSEAEELVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSE EELVR V RKFSDKEPLLKTLDKYVRV+RTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKD 180
           QKQRWY ADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYN+LITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADI 240
           KAKAL KVLWYFEKMKGM+RCKPN+VTYNILTRAFAQAGKV+QV  LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDA+GKNGMIKEME ML+RMKSN+IKPDII+FNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDS 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEEVFRKMKDMG++PSY+TCESLIMMYGHCD 
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKL 420
           VSKAREIFDGMV+SGK +RVSTLN+MLDVYCMNGLP+EAD LF+SASSM+V PDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEK  PART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 RSVEKPASARTKTGSRNFESNLKNQA 506
            SVEKP S+R + GSR  ES++KN A
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHA 506

[Close]

BLAST of Sed0012904 vs. NCBI nr
Match: XP_022978471.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita maxima])

HSP 1 Score: 859.8 bits (2220), Expect = 1.2e-245
Identity = 436/504 (86.51%), Postives = 466/504 (92.46%), Query Frame = 0


Query: 1   MPLSISLQFSSTFTP-SSSSPNSQLSRPWLPRPSSLRTAVPTRVVCVSTRPMKKSAPKTD 60
           MPLS SLQFS +FTP SSSS N Q S+ WLP P SLR AV TRVVC+STRP +KS  KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQRSQTWLPLPLSLRRAVSTRVVCISTRPKRKSGAKTD 60

Query: 61  RSEAEELVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVR V RKFSDKEPLLKTLDKYVRV+RTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKD 180
           QKQRWY ADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYN+LITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADI 240
           KAKAL KVLWYFEKMKGM+RCKPN+VTYNILTRAFAQAGKV+QV  LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDA+GKNGMIKEME ML+RMKSN+IKPDII+FNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDS 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEEVFRKMK MG++PSY+TCESLIMMYGHCD 
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKGMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKL 420
           VSKAREIFDGMV+SGK +RVSTLN+MLDVYCMNGLP+EAD LF+SASSMRV PDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMRVFPDSTTYKL 420

Query: 421 LYKAYTKADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEK  PA T TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPASTGTGSRHSE 480

Query: 481 RSVEKPASARTKTGSRNFESNLKN 504
            SVE P S+R + GSR  ES++KN
Sbjct: 481 SSVENPISSRNRRGSRKLESSVKN 504

[Close]

BLAST of Sed0012904 vs. ExPASy Swiss-Prot
Match: Q9SV96 (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 2.3e-170
Identity = 310/490 (63.27%), Postives = 383/490 (78.16%), Query Frame = 0


Query: 10  SSTFTPSSSSPNSQLSRPWLPRPSSL---RTAVPTRVVCVSTRPMKKSAPK-TDRSEAEE 69
           S  F+   SS   +    WL    +L   R +  TR+ C +    +K A + +   E   
Sbjct: 10  SLRFSDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERENRV 69

Query: 70  LVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWY 129
           LVR +  + SD+EPL+KTLDKYV+VVR +HCFLLFEELGK DKWLQCLEVFRWMQKQRWY
Sbjct: 70  LVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWY 129

Query: 130 TADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKDKAKALD 189
             DNGVYSKLIS+MGKKGQ RMAMWLFSEM+NSGCRPD SVYN+LITAHLH++DKAKAL+
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189

Query: 190 KVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADIYTYNGV 249
           KV  Y +KMKG++RC+PN+VTYNIL RAFAQ+GKV+QV  LFKDLD S VS D+YT+NGV
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249

Query: 250 MDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKSLLRSKE 309
           MDA+GKNGMIKEME +L+RM+SN+ KPDIITFN+LIDSYGKKQ FEKMEQ FKSL+RSKE
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309

Query: 310 RPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDSVSKARE 369
           +PTLPTFNSMI NYGKAR+ +KAE VF+KM DM + PS+IT E +IMMYG+C SVS+ARE
Sbjct: 310 KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRARE 369

Query: 370 IFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKLLYKAYT 429
           IF+ +  S + ++ STLN+ML+VYC NGL +EAD LF +AS+ RV PD++TYK LYKAYT
Sbjct: 370 IFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYT 429

Query: 430 KADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSERSVEKP 489
           KAD+KE ++ L+K M+K GI+PNKRFFL+AL   GS    R+P  + + +R S RS    
Sbjct: 430 KADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGS----RLPG-SGSENRKSTRSSRSR 489

Query: 490 ASARTKTGSR 496
            S + + G++
Sbjct: 490 DSPKGRGGNQ 494

[Close]

BLAST of Sed0012904 vs. ExPASy Swiss-Prot
Match: A3ABE1 (Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0750400 PE=3 SV=2)

HSP 1 Score: 598.2 bits (1541), Expect = 8.7e-170
Identity = 308/480 (64.17%), Postives = 373/480 (77.71%), Query Frame = 0


Query: 25  SRPWLPRPSSLRTAVPTR--VVCVSTRPMKKSAPKT------DRSEAEELVRDVFRKFS- 84
           S PW PR      A   R  +   + R  ++ A         + +EA +LVR   R+ S 
Sbjct: 8   SSPWPPRHHGAAAAPAARRHMAAAAARGKRRGAGAAAAEGADEAAEAADLVRFFLRRTSG 67

Query: 85  DKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYTADNGVYSKL 144
            KE L+  LD++V+VVRTEHCFLLFEELG+RD WLQCLEVFRWMQKQRWY ADNG+YSKL
Sbjct: 68  GKERLVAVLDRHVKVVRTEHCFLLFEELGRRDGWLQCLEVFRWMQKQRWYVADNGIYSKL 127

Query: 145 ISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKDKAKALDKVLWYFEKMK 204
           IS+MG+KGQIRMAMWLFS+MRNSGCRPDTSVYNSLI  HLHS+DK+KAL K L YFEKMK
Sbjct: 128 ISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGTHLHSRDKSKALAKALGYFEKMK 187

Query: 205 GMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADIYTYNGVMDAFGKNGMI 264
            +DRC+PNIVTYNIL RAFAQAG  +Q++ILFKDLDES VS DIYTYNGVMDA+GKNGMI
Sbjct: 188 TIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGVMDAYGKNGMI 247

Query: 265 KEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKSLLRSKERPTLPTFNSM 324
            EME +L RMKSNQ +PD+ITFN+LIDSYG+KQ F+KMEQVFKSLLRSKE+PT PTFNSM
Sbjct: 248 TEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVFKSLLRSKEKPTHPTFNSM 307

Query: 325 ITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDSVSKAREIFDGMVSSGK 384
           ITNYGKARLREKAE V  KM +MGF P+Y+T E LIMMY +CD VS+AR+IFD +VSS  
Sbjct: 308 ITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYCDCVSRARQIFDELVSSQN 367

Query: 385 DIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKLLYKAYTKADVKELLEK 444
           ++ +S++N+MLD YCMNGLP+EAD L DS      +P ++TYKLLYKAYTKA+ K+L++K
Sbjct: 368 NVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYTKANDKKLIQK 427

Query: 445 LLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSERSVEKPASARTKTGSR 496
           LLK M+  GI+PNK+FFLDAL   G++ +K  P    + +  S+  VE   ++ T T S+
Sbjct: 428 LLKRMNSQGIVPNKKFFLDALEAFGNTDKK--PRTVPSKNSASKPDVESANNSGTDTSSK 485

[Close]

BLAST of Sed0012904 vs. ExPASy Swiss-Prot
Match: A7LN87 (Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4577 GN=PPR5 PE=2 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 3.6e-168
Identity = 311/490 (63.47%), Postives = 379/490 (77.35%), Query Frame = 0


Query: 15  PSSSSPNSQLSRPWLPRPSSLRTAVPTRVVCVSTRPMKKSAPKT-------DRSEAEELV 74
           PS+SSP  Q  +P  P P     A  TR V ++ R  ++ A            +EA ELV
Sbjct: 5   PSTSSPWPQ-RQPPSPCPGGGGGA--TRHVALAARSKRRGAGPAAAEGVDEAAAEAAELV 64

Query: 75  RDVFRKFS-DKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYT 134
           R + R+ +  KE L+  LD++VRVVRTEHCFLLFEELG+RD WLQCL+VFRWMQKQRWY 
Sbjct: 65  RSLLRRTAGGKERLVPVLDRHVRVVRTEHCFLLFEELGRRDAWLQCLDVFRWMQKQRWYV 124

Query: 135 ADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKDKAKALDK 194
           ADNG+YSKLIS+MG+KGQIRMAMWLFS+MRNSGC+PDTSVYNSLI AHLHS+DK KAL K
Sbjct: 125 ADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKTKALAK 184

Query: 195 VLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADIYTYNGVM 254
            L YFEKMK ++RC+P IVTYNIL RAFAQAG  +QV++LFKDLDES+VS D+YTYNGV+
Sbjct: 185 ALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVL 244

Query: 255 DAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKSLLRSKER 314
           DA+GKNGMIKEME +L RMKS Q +PD+ITFN+LIDSYG+KQ F+KMEQVFKSLLRSKER
Sbjct: 245 DAYGKNGMIKEMESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKER 304

Query: 315 PTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDSVSKAREI 374
           PT PTFNSMITNYG+ARLREKAE V  KM+++GF P+Y+T E LI+MY HCD VSKAR++
Sbjct: 305 PTHPTFNSMITNYGRARLREKAESVVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQV 364

Query: 375 FDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKLLYKAYTK 434
           FD +V+S   + +S+LNSML+ YCMNGL  EAD L D+A    V+P+ +TYKLLYKAYTK
Sbjct: 365 FDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLDTALQQCVVPNGSTYKLLYKAYTK 424

Query: 435 ADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRN-SERSVEKP 494
           A+ K L++KLLK M+K GI+PNK+FFLDAL   G+S  K    RT  G  + S+ S +  
Sbjct: 425 ANDKLLVQKLLKRMNKQGIVPNKKFFLDALEAFGTSDRK---PRTSPGINSASKPSTDSA 484

Query: 495 ASARTKTGSR 496
             + T T  +
Sbjct: 485 GDSETATSDK 488

[Close]

BLAST of Sed0012904 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.2e-40
Identity = 108/380 (28.42%), Postives = 175/380 (46.05%), Query Frame = 0


Query: 101 EELGKRDKWLQCLEVFRWMQKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 160
           +E  K ++W   L++F  ++KQ WY      Y+KL  ++G   Q   A  LF  M + G 
Sbjct: 66  DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 125

Query: 161 RPDTSVYNSLITAHLHSKDKAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKV 220
           +P   VY SLI+ +     K++ LDK     E MK +  CKP++ T+ +L     + G+ 
Sbjct: 126 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 185

Query: 221 EQVEILFKDLDESIVSADIYTYNGVMDAFGKNGMIKEMELML------------------ 280
           + V+ +  ++    V     TYN ++D +GK GM +EME +L                  
Sbjct: 186 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 245

Query: 281 ------------------SRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKSLLRSK 340
                             SR +   ++PDI TFN+LI S+GK  +++KM  V   + +  
Sbjct: 246 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 305

Query: 341 ERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDSVSKAR 400
              T  T+N +I  +GKA   EK ++VFRKMK  G  P+ IT  SL+  Y     V K  
Sbjct: 306 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 365

Query: 401 EIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKLLYKAY 445
            +   +V+S   +     N +++ Y   G       L+      +  PD  T+  + K Y
Sbjct: 366 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 425

[Close]

BLAST of Sed0012904 vs. ExPASy Swiss-Prot
Match: Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.4e-39
Identity = 99/352 (28.12%), Postives = 169/352 (48.01%), Query Frame = 0


Query: 102 ELGKRDKWLQCLEVFRWMQKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCR 161
           +L  + +WLQ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 162 PDTSVYNSLITAHLHSKDKAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVE 221
           P   +Y +L+ A+  S      +D      +KMK   +C+P++ TY+ L +A   A + +
Sbjct: 157 PTVELYTALLAAYTRS----NLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFD 216

Query: 222 QVEILFKDLDESIVSADIYTYNGVMDAFGKNGMIKEMELMLSRM-KSNQIKPDIITFNLL 281
            V+ L+K++DE +++ +  T N V+  +G+ G   +ME +LS M  S   KPD+ T N++
Sbjct: 217 LVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNII 276

Query: 282 IDSYGKKQLFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGF 341
           +  +G     + ME  ++        P   TFN +I +YGK R+ +K   V   M+ + F
Sbjct: 277 LSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEF 336

Query: 342 NPSYITCESLIMMYGHCDSVSKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADS 401
             +  T  ++I  +            FD M S G      T   +++ Y   GL  +  S
Sbjct: 337 PWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVIS 396

Query: 402 LFDSASSMRVLPDSTTYKLLYKAYTKADVKELLEKLLKNMDKAGIIPNKRFF 453
               A+   +  ++  Y  +  A  KAD    +E++   M +   + + R F
Sbjct: 397 SVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

[Close]

BLAST of Sed0012904 vs. ExPASy TrEMBL
Match: A0A6J1GGN3 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453772 PE=3 SV=1)

HSP 1 Score: 867.1 bits (2239), Expect = 3.7e-248
Identity = 439/506 (86.76%), Postives = 471/506 (93.08%), Query Frame = 0


Query: 1   MPLSISLQFSSTFTP-SSSSPNSQLSRPWLPRPSSLRTAVPTRVVCVSTRPMKKSAPKTD 60
           MPLS SLQFS +FTP SSSS N QLS+ WLP P SLR AV TRVVC+STRP +KSA KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  RSEAEELVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSE EELVR V RKFSDKEPLLKTLDKYVRV+RTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKD 180
           QKQRWY ADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYN+LITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADI 240
           KAKAL KVLWYFEKMKGM+RCKPN+VTYNILTRAFAQAGKV+QV  LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDA+GKNGMIKEME ML+RMKSN+IKPDII+FNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDS 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEEVFRKMKDMG++PSY+TCESLIMMYGHCD 
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKL 420
           VSKAREIFDGMV+SGK +RVSTLN+MLDVYCMNGLP+EAD LF+SASSM+V PDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEK  PART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 RSVEKPASARTKTGSRNFESNLKNQA 506
            SVEKP S+R + GSR  ES++KN A
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHA 506

[Close]

BLAST of Sed0012904 vs. ExPASy TrEMBL
Match: A0A6J1IMR8 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478441 PE=3 SV=1)

HSP 1 Score: 859.8 bits (2220), Expect = 5.9e-246
Identity = 436/504 (86.51%), Postives = 466/504 (92.46%), Query Frame = 0


Query: 1   MPLSISLQFSSTFTP-SSSSPNSQLSRPWLPRPSSLRTAVPTRVVCVSTRPMKKSAPKTD 60
           MPLS SLQFS +FTP SSSS N Q S+ WLP P SLR AV TRVVC+STRP +KS  KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQRSQTWLPLPLSLRRAVSTRVVCISTRPKRKSGAKTD 60

Query: 61  RSEAEELVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVR V RKFSDKEPLLKTLDKYVRV+RTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKD 180
           QKQRWY ADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYN+LITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADI 240
           KAKAL KVLWYFEKMKGM+RCKPN+VTYNILTRAFAQAGKV+QV  LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDA+GKNGMIKEME ML+RMKSN+IKPDII+FNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDS 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEEVFRKMK MG++PSY+TCESLIMMYGHCD 
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKGMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKL 420
           VSKAREIFDGMV+SGK +RVSTLN+MLDVYCMNGLP+EAD LF+SASSMRV PDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMRVFPDSTTYKL 420

Query: 421 LYKAYTKADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEK  PA T TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPASTGTGSRHSE 480

Query: 481 RSVEKPASARTKTGSRNFESNLKN 504
            SVE P S+R + GSR  ES++KN
Sbjct: 481 SSVENPISSRNRRGSRKLESSVKN 504

[Close]

BLAST of Sed0012904 vs. ExPASy TrEMBL
Match: A0A0A0KGV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501290 PE=3 SV=1)

HSP 1 Score: 855.5 bits (2209), Expect = 1.1e-244
Identity = 433/502 (86.25%), Postives = 467/502 (93.03%), Query Frame = 0


Query: 1   MPLSISLQFSSTFTPSSSSPNSQLSRPWLPRPSSLRTAVPTRVVCVSTRPMKKSAPKTDR 60
           MPLS SLQFS TFTPS SS  SQLSR WLP PSS++ AV TRVVC+STRP +K   KTDR
Sbjct: 1   MPLSFSLQFSPTFTPSYSS--SQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDR 60

Query: 61  SEAEELVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWMQ 120
           SEAEELVR + R FSDKEPLLKTLDKYVRV+RTEHCFLLFEELGKRDKWL+CLEVFRWMQ
Sbjct: 61  SEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQ 120

Query: 121 KQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKDK 180
           KQRWY ADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYN+LITAHLHSKDK
Sbjct: 121 KQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDK 180

Query: 181 AKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADIY 240
           AKAL KVL YFEKMKGM+RCKPNIVTYNILTRAFAQA KV+QV  LFKDLDES+VSADIY
Sbjct: 181 AKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIY 240

Query: 241 TYNGVMDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKSL 300
           TYNGVMDA+GKNG IKEMELML+RMKSNQIKPDII+FNLLIDSYGKKQLF+KMEQVFKSL
Sbjct: 241 TYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSL 300

Query: 301 LRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDSV 360
           LRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMG++PSY+TCESLIMMYGHCD V
Sbjct: 301 LRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCV 360

Query: 361 SKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKLL 420
           SKAREIFDGMV+SGK++RVSTLN+MLDVYC+NGLP+EAD LF+SA +MRV PDSTTYKLL
Sbjct: 361 SKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLL 420

Query: 421 YKAYTKADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSER 480
           YKAYTKAD KELLEKLLKNMDKAGIIPNKRFFLDALGT+GSS EK  PARTRTGSRNS+ 
Sbjct: 421 YKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDS 480

Query: 481 SVEKPASARTKTGSRNFESNLK 503
           SVEK +S+RT++G RN ESN++
Sbjct: 481 SVEKQSSSRTRSGPRNLESNVQ 500

[Close]

BLAST of Sed0012904 vs. ExPASy TrEMBL
Match: A0A5A7T266 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00650 PE=3 SV=1)

HSP 1 Score: 853.2 bits (2203), Expect = 5.5e-244
Identity = 431/503 (85.69%), Postives = 466/503 (92.64%), Query Frame = 0


Query: 1   MPLSISLQFSSTFTPS-SSSPNSQLSRPWLPRPSSLRTAVPTRVVCVSTRPMKKSAPKTD 60
           MPLS+S QFS  FT S SSS  SQLSR W P PSSL+    TRVVCVSTRP +KS  KTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWFPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60

Query: 61  RSEAEELVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVR + +KFSDKEPLLKTLDKYVRV+RTEHCFLLFEELGKRDKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKD 180
           QKQRWY ADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYN+LITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADI 240
           KAKAL KVLWYFEKMKGM+RCKPNIVTYNILTRAFAQA KV+QV  LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDA+GKNG IKEMELML+RMKSNQIKPDII+FNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDS 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEEVFRKMKDMG++PSY+TCESLIMMYGHCD 
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKL 420
           VSKAREIFDGMV+SGK++RVSTLN+MLDVYC+NGLP EAD LF+SA +M+V PDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSE 480
           LYKAYTKAD+KELLEKLLKNMDKAGIIPNKRFFLDALGT+GSS EK  PART+TGSRNSE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 RSVEKPASARTKTGSRNFESNLK 503
            SVEK +S+RT++G RN ESN++
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQ 503

[Close]

BLAST of Sed0012904 vs. ExPASy TrEMBL
Match: A0A5D3CMK0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002480 PE=3 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 2.7e-243
Identity = 431/503 (85.69%), Postives = 466/503 (92.64%), Query Frame = 0


Query: 1   MPLSISLQFSSTFTPS-SSSPNSQLSRPWLPRPSSLRTAVPTRVVCVSTRPMKKSAPKTD 60
           MPLS+S QFS  FT S SSS  SQLSR WLP PSSL+    TRVVCVSTR  +KS  KTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  RSEAEELVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVR + +KFSDKEPLLKTLDKYVRV+RTEHCFLLFEELGKRDKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKD 180
           QKQRWY ADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYN+LITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADI 240
           KAKAL KVLWYFEKMKGM+RCKPNIVTYNILTRAFAQA KV+QV  LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDA+GKNG IKEMELML+RMKSNQIKPDII+FNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDS 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEEVFRKMKDMG++PSY+TCESLIMMYGHCD 
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKL 420
           VSKAREIFDGMV+SGK++RVSTLN+MLDVYC+NGLP EAD LF+SA +M+V PDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSE 480
           LYKAYTKAD+KELLEKLLKNMDKAGIIPNKRFFLDALGT+GSS EK  PART+TGSRNSE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 RSVEKPASARTKTGSRNFESNLK 503
            SVEK +S+RT++G RN ESN++
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQ 503

[Close]

BLAST of Sed0012904 vs. TAIR 10
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 600.1 bits (1546), Expect = 1.6e-171
Identity = 310/490 (63.27%), Postives = 383/490 (78.16%), Query Frame = 0


Query: 10  SSTFTPSSSSPNSQLSRPWLPRPSSL---RTAVPTRVVCVSTRPMKKSAPK-TDRSEAEE 69
           S  F+   SS   +    WL    +L   R +  TR+ C +    +K A + +   E   
Sbjct: 10  SLRFSDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERENRV 69

Query: 70  LVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWY 129
           LVR +  + SD+EPL+KTLDKYV+VVR +HCFLLFEELGK DKWLQCLEVFRWMQKQRWY
Sbjct: 70  LVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWY 129

Query: 130 TADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKDKAKALD 189
             DNGVYSKLIS+MGKKGQ RMAMWLFSEM+NSGCRPD SVYN+LITAHLH++DKAKAL+
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189

Query: 190 KVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADIYTYNGV 249
           KV  Y +KMKG++RC+PN+VTYNIL RAFAQ+GKV+QV  LFKDLD S VS D+YT+NGV
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249

Query: 250 MDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKSLLRSKE 309
           MDA+GKNGMIKEME +L+RM+SN+ KPDIITFN+LIDSYGKKQ FEKMEQ FKSL+RSKE
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309

Query: 310 RPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDSVSKARE 369
           +PTLPTFNSMI NYGKAR+ +KAE VF+KM DM + PS+IT E +IMMYG+C SVS+ARE
Sbjct: 310 KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRARE 369

Query: 370 IFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKLLYKAYT 429
           IF+ +  S + ++ STLN+ML+VYC NGL +EAD LF +AS+ RV PD++TYK LYKAYT
Sbjct: 370 IFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYT 429

Query: 430 KADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSERSVEKP 489
           KAD+KE ++ L+K M+K GI+PNKRFFL+AL   GS    R+P  + + +R S RS    
Sbjct: 430 KADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGS----RLPG-SGSENRKSTRSSRSR 489

Query: 490 ASARTKTGSR 496
            S + + G++
Sbjct: 490 DSPKGRGGNQ 494

[Close]

BLAST of Sed0012904 vs. TAIR 10
Match: AT4G39620.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 600.1 bits (1546), Expect = 1.6e-171
Identity = 310/490 (63.27%), Postives = 383/490 (78.16%), Query Frame = 0


Query: 10  SSTFTPSSSSPNSQLSRPWLPRPSSL---RTAVPTRVVCVSTRPMKKSAPK-TDRSEAEE 69
           S  F+   SS   +    WL    +L   R +  TR+ C +    +K A + +   E   
Sbjct: 10  SLRFSDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERENRV 69

Query: 70  LVRDVFRKFSDKEPLLKTLDKYVRVVRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWY 129
           LVR +  + SD+EPL+KTLDKYV+VVR +HCFLLFEELGK DKWLQCLEVFRWMQKQRWY
Sbjct: 70  LVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWY 129

Query: 130 TADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSKDKAKALD 189
             DNGVYSKLIS+MGKKGQ RMAMWLFSEM+NSGCRPD SVYN+LITAHLH++DKAKAL+
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189

Query: 190 KVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILFKDLDESIVSADIYTYNGV 249
           KV  Y +KMKG++RC+PN+VTYNIL RAFAQ+GKV+QV  LFKDLD S VS D+YT+NGV
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249

Query: 250 MDAFGKNGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKSLLRSKE 309
           MDA+GKNGMIKEME +L+RM+SN+ KPDIITFN+LIDSYGKKQ FEKMEQ FKSL+RSKE
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309

Query: 310 RPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDSVSKARE 369
           +PTLPTFNSMI NYGKAR+ +KAE VF+KM DM + PS+IT E +IMMYG+C SVS+ARE
Sbjct: 310 KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRARE 369

Query: 370 IFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKLLYKAYT 429
           IF+ +  S + ++ STLN+ML+VYC NGL +EAD LF +AS+ RV PD++TYK LYKAYT
Sbjct: 370 IFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYT 429

Query: 430 KADVKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKRVPARTRTGSRNSERSVEKP 489
           KAD+KE ++ L+K M+K GI+PNKRFFL+AL   GS    R+P  + + +R S RS    
Sbjct: 430 KADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGS----RLPG-SGSENRKSTRSSRSR 489

Query: 490 ASARTKTGSR 496
            S + + G++
Sbjct: 490 DSPKGRGGNQ 494

[Close]

BLAST of Sed0012904 vs. TAIR 10
Match: AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 167.2 bits (422), Expect = 3.5e-41
Identity = 108/381 (28.35%), Postives = 175/381 (45.93%), Query Frame = 0


Query: 101 EELGKRDKWLQCLEVFRWMQKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 160
           +E  K ++W   L++F  ++KQ WY      Y+KL  ++G   Q   A  LF  M + G 
Sbjct: 116 DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 175

Query: 161 RPDTSVYNSLITAHLHSKDKAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKV 220
           +P   VY SLI+ +     K++ LDK     E MK +  CKP++ T+ +L     + G+ 
Sbjct: 176 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 235

Query: 221 EQVEILFKDLDESIVSADIYTYNGVMDAFGKNGMIKEMELML------------------ 280
           + V+ +  ++    V     TYN ++D +GK GM +EME +L                  
Sbjct: 236 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 295

Query: 281 ------------------SRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKSLLRSK 340
                             SR +   ++PDI TFN+LI S+GK  +++KM  V   + +  
Sbjct: 296 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 355

Query: 341 ERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDSVSKAR 400
              T  T+N +I  +GKA   EK ++VFRKMK  G  P+ IT  SL+  Y     V K  
Sbjct: 356 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 415

Query: 401 EIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKLLYKAY 446
            +   +V+S   +     N +++ Y   G       L+      +  PD  T+  + K Y
Sbjct: 416 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 475

[Close]

BLAST of Sed0012904 vs. TAIR 10
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-40
Identity = 99/352 (28.12%), Postives = 169/352 (48.01%), Query Frame = 0


Query: 102 ELGKRDKWLQCLEVFRWMQKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCR 161
           +L  + +WLQ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 162 PDTSVYNSLITAHLHSKDKAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVE 221
           P   +Y +L+ A+  S      +D      +KMK   +C+P++ TY+ L +A   A + +
Sbjct: 157 PTVELYTALLAAYTRS----NLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFD 216

Query: 222 QVEILFKDLDESIVSADIYTYNGVMDAFGKNGMIKEMELMLSRM-KSNQIKPDIITFNLL 281
            V+ L+K++DE +++ +  T N V+  +G+ G   +ME +LS M  S   KPD+ T N++
Sbjct: 217 LVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNII 276

Query: 282 IDSYGKKQLFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGF 341
           +  +G     + ME  ++        P   TFN +I +YGK R+ +K   V   M+ + F
Sbjct: 277 LSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEF 336

Query: 342 NPSYITCESLIMMYGHCDSVSKAREIFDGMVSSGKDIRVSTLNSMLDVYCMNGLPVEADS 401
             +  T  ++I  +            FD M S G      T   +++ Y   GL  +  S
Sbjct: 337 PWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVIS 396

Query: 402 LFDSASSMRVLPDSTTYKLLYKAYTKADVKELLEKLLKNMDKAGIIPNKRFF 453
               A+   +  ++  Y  +  A  KAD    +E++   M +   + + R F
Sbjct: 397 SVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

[Close]

BLAST of Sed0012904 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 9.6e-39
Identity = 106/385 (27.53%), Postives = 182/385 (47.27%), Query Frame = 0


Query: 108 KWLQCLEVFRWMQKQRWYTADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVY 167
           +W   ++VF  +++Q WY  + G+Y KLI ++GK  Q   A  LF EM N GC  +  VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188

Query: 168 NSLITAHLHSKDKAKALDKVLWYFEKMKGMDRCKPNIVTYNILTRAFAQAGKVEQVEILF 227
            +L++A+     ++   D      E+MK    C+P++ TY+IL ++F Q    ++V+ L 
Sbjct: 189 TALVSAY----SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 248

Query: 228 KDLDESIVSADIYTYNGVMDAFGK------------------------------------ 287
            D+    +  +  TYN ++DA+GK                                    
Sbjct: 249 SDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGG 308

Query: 288 NGMIKEMELMLSRMKSNQIKPDIITFNLLIDSYGKKQLFEKMEQVFKSLLRSKERPTLPT 347
           NG I+ ME    + +S+ I+P+I TFN+L+DSYGK   ++KM  V + + +     T+ T
Sbjct: 309 NGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT 368

Query: 348 FNSMITNYGKARLREKAEEVFRKMKDMGFNPSYITCESLIMMYGHCDSVSKAREIFDGMV 407
           +N +I  +G+A   ++ E +FR M+     PS +T  SL+  YG      K   +   + 
Sbjct: 369 YNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIE 428

Query: 408 SSGKDIRVSTLNSMLDVYCMNGLPVEADSLFDSASSMRVLPDSTTYKLLYKAY----TKA 453
           +S   + +   N ++D Y       E   + +        PD  TY+ + KAY       
Sbjct: 429 NSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTT 488

The following BLAST results are available for this feature:

BLAST of Sed0012904 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034169.1	1.2e-248	87.15	Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosper...	[more]
KAG6604006.1	4.5e-248	86.96	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_023543919.1	7.6e-248	86.76	pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ...	[more]
XP_022950765.1	7.6e-248	86.76	pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ...	[more]
XP_022978471.1	1.2e-245	86.51	pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ...	[more]

BLAST of Sed0012904 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SV96	2.3e-170	63.27	Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop...	[more]
A3ABE1	8.7e-170	64.17	Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza...	[more]
A7LN87	3.6e-168	63.47	Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4...	[more]
Q9SCP4	2.2e-40	28.42	Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX...	[more]
Q9SQU6	1.4e-39	28.13	Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop...	[more]

BLAST of Sed0012904 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGN3	3.7e-248	86.76	pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbit...	[more]
A0A6J1IMR8	5.9e-246	86.51	pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbit...	[more]
A0A0A0KGV8	1.1e-244	86.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501290 PE=3 SV=1	[more]
A0A5A7T266	5.5e-244	85.69	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3CMK0	2.7e-243	85.69	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Sed0012904 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39620.1	1.6e-171	63.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39620.2	1.6e-171	63.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53170.1	3.5e-41	28.35	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G06430.1	1.0e-40	28.13	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48730.1	9.6e-39	27.53	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 346..374 e-value: 0.02 score: 15.1 coord: 311..340 e-value: 1.3E-6 score: 28.2 coord: 381..404 e-value: 1.7E-4 score: 21.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 238..284 e-value: 1.9E-9 score: 37.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 151..214 e-value: 4.5E-9 score: 36.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 311..343 e-value: 5.7E-8 score: 30.5 coord: 131..164 e-value: 2.7E-5 score: 22.1 coord: 381..413 e-value: 5.1E-5 score: 21.2 coord: 275..308 e-value: 5.6E-6 score: 24.2 coord: 240..274 e-value: 3.0E-8 score: 31.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 413..447 score: 8.681407
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 273..307 score: 10.358486
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 203..237 score: 9.218511
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 378..412 score: 9.010246
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 128..162 score: 11.443655
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 308..342 score: 11.706726
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 238..272 score: 11.476539
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 233..299 e-value: 2.4E-16 score: 61.8 coord: 57..232 e-value: 4.9E-38 score: 132.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 300..500 e-value: 5.8E-31 score: 110.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 113..443
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 487..507
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 461..507
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 469..486
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..30
None	No IPR available	PANTHER	PTHR47874:SF3	BNAA01G05620D PROTEIN	coord: 37..476
IPR044179	Pentatricopeptide repeat-containing protein PPR5-like	PANTHER	PTHR47874	EXPRESSED PROTEIN	coord: 37..476

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012904.1	Sed0012904.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding