Sed0012892 (gene) Chayote v1

Overview


Name	Sed0012892
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Translocase subunit seca
Location	LG07: 36365329 .. 36367189 (-)
RNA-Seq Expression	Sed0012892
Synteny	Sed0012892

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTAAATTGGGAAGGCAAGAGATTGGCCAAGCGAGTTGGGAACCGTTGCTGGTCTTCCTCTTCCTCCGCCTTATCTCTCTGTTCTCGATATTTTTAAGCTCTGCTCTTGTGATTGGCTTTGTCACTCCTAAACCCCATTCCCAAACGCCTTCCCCTTCTTTTTCAGGTATTCTTCTTTTTCAATCTCAATCACCCTTTCGTTGTTTTGTTTGATTTCTTGCTTTCTTAGTGTTTGATTCTCCAATTCCTACACCTTTTTGAGTTTATTGTGGAGCTATAGCGCCGATTTTAGGGTTTCGGCGATTCCTGTACTCATATGATTATGCCAACGAATGACCTGATTTTTTGTCCCTTCTTTTTAGCTTTACTATTGTTCGCCTAATTGCCGAATCGATTCCCATCTTAGGGGATCAAATCCAACTTTGTGTTTTTGTTTGGTGCCAATTGTCCAGAGAGGATCATTTATTTATTTTTATTTATTATTAAACAGCTTTATTTGTCCCTTGAAATAACCCAAACGCGGATATGAATCACTGCCCCATTTTATCAAACGCCTTCTCGGGCGGCCACGAAGAGATGAGATCCCCTGTGGTTTGTCCTAAGCCACGCCGTCTCTCCCATCGTAAGCTCCCCGGTGCCGATACCTCTCTCCGGTTCAATCTTAAGTGAGTTCTGTCTCTCTTTATCCTTCTTTTTTGCTAGTTCTATCAGGATATGCTTATTTGTTCTTTTCAACTGAATTTCAGTCACCCAGTAGAGCAGATTGATATGCCTGCTGGACCCGATCTGCTCGACTTCCTCCTCGCTAAGGTATATGGATGCTCATCACTCATTTCTCAGAACTTGAAAGTTCAATTACGTTAAATTATCAATCAACCCAAAAAGTTTAACTCTGTGGGTTGTGTTAACTTTAACTATATCAATCAACACTCTTCTTAGTTTTAGAAATTTGAGAAAATACCCTGCAAATTTTGATGGGATAGGAAACGACTTGTCACGCTTCTTCAATTATGTTAAATCACCCATTAATTCATAAACTTAAGTGAGTGGGTTTGGGTAAATTTAATTATATCGATTAGCGTGAATTATTCTATTATTTTTGGGATTTAGAGCAGGCCACCCTCTGTAGCTTAAGCTGCTCATGATGATGTTGTTAAATGATGTAGGGTGGTTGCAGTGTGGATCAATCATATACGCAGTTGGCTTCGTCGCCCCCATTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGATGCCCGATTCGGGGACGAACAATTCATCCCCTTTCCTCCAATGGCTCCACCGTCTGGTCAGTTGTCGCCCTCTGCAACAGCCTCCAGGAAAGGAGGAGGAGGCCGTGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCTCGACAGGGATAGGCAAAACTGCAGAATCCCTGCCTTTGCTTAGAAACCCATCTCCATATCAAAATCCATAAAACAATACAAGACAAAGACACATTACACTTCCAAGAGAAGTGATTTCCCAAATACAACAGAAGAGATGAATATCAAGATCTCTCAAGAGAAGAATACAATTTCCCCCTTTTTTTTGTGAATACGTTTGAAGTTCTTTGTAAATGTAAGTAAAAATCAAAAGCTGTGTATTTTTCAGGCAGTTCTTTTTCGAGTCGATAATGCGTGGGGAAGGTCAACCTCTTGTATTATATTTTTGTAATTAGAAGTGTTATGGTTGAGGAAATTTTCATTGTGTAGTGGGTTGGTTTTTGGATCATTTGAAGATGAAAGGCAAATGTGTACATATTGCAGAAGTTATCAACATGTGAATATTGTAGAACA

mRNA sequence

GCTAAATTGGGAAGGCAAGAGATTGGCCAAGCGAGTTGGGAACCGTTGCTGGTCTTCCTCTTCCTCCGCCTTATCTCTCTGTTCTCGATATTTTTAAGCTCTGCTCTTGTGATTGGCTTTGTCACTCCTAAACCCCATTCCCAAACGCCTTCCCCTTCTTTTTCAGCTTTATTTGTCCCTTGAAATAACCCAAACGCGGATATGAATCACTGCCCCATTTTATCAAACGCCTTCTCGGGCGGCCACGAAGAGATGAGATCCCCTGTGGTTTGTCCTAAGCCACGCCGTCTCTCCCATCGTAAGCTCCCCGGTGCCGATACCTCTCTCCGGTTCAATCTTAATCACCCAGTAGAGCAGATTGATATGCCTGCTGGACCCGATCTGCTCGACTTCCTCCTCGCTAAGGGTGGTTGCAGTGTGGATCAATCATATACGCAGTTGGCTTCGTCGCCCCCATTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGATGCCCGATTCGGGGACGAACAATTCATCCCCTTTCCTCCAATGGCTCCACCGTCTGGTCAGTTGTCGCCCTCTGCAACAGCCTCCAGGAAAGGAGGAGGAGGCCGTGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCTCGACAGGGATAGGCAAAACTGCAGAATCCCTGCCTTTGCTTAGAAACCCATCTCCATATCAAAATCCATAAAACAATACAAGACAAAGACACATTACACTTCCAAGAGAAGTGATTTCCCAAATACAACAGAAGAGATGAATATCAAGATCTCTCAAGAGAAGAATACAATTTCCCCCTTTTTTTTGTGAATACGTTTGAAGTTCTTTGTAAATGTAAGTAAAAATCAAAAGCTGTGTATTTTTCAGGCAGTTCTTTTTCGAGTCGATAATGCGTGGGGAAGGTCAACCTCTTGTATTATATTTTTGTAATTAGAAGTGTTATGGTTGAGGAAATTTTCATTGTGTAGTGGGTTGGTTTTTGGATCATTTGAAGATGAAAGGCAAATGTGTACATATTGCAGAAGTTATCAACATGTGAATATTGTAGAACA

Coding sequence (CDS)

ATGAATCACTGCCCCATTTTATCAAACGCCTTCTCGGGCGGCCACGAAGAGATGAGATCCCCTGTGGTTTGTCCTAAGCCACGCCGTCTCTCCCATCGTAAGCTCCCCGGTGCCGATACCTCTCTCCGGTTCAATCTTAATCACCCAGTAGAGCAGATTGATATGCCTGCTGGACCCGATCTGCTCGACTTCCTCCTCGCTAAGGGTGGTTGCAGTGTGGATCAATCATATACGCAGTTGGCTTCGTCGCCCCCATTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGATGCCCGATTCGGGGACGAACAATTCATCCCCTTTCCTCCAATGGCTCCACCGTCTGGTCAGTTGTCGCCCTCTGCAACAGCCTCCAGGAAAGGAGGAGGAGGCCGTGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCTCGACAGGGATAGGCAAAACTGCAGAATCCCTGCCTTTGCTTAG

Protein sequence

MNHCPILSNAFSGGHEEMRSPVVCPKPRRLSHRKLPGADTSLRFNLNHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFGDEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA

Homology

[Close]

BLAST of Sed0012892 vs. NCBI nr
Match: XP_022957437.1 (uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothetical protein SDJN02_06117 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.6 bits (693), Expect = 4.7e-69
Identity = 142/183 (77.60%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNL 60
           MNHC ILSNAFS  HEEMR+PV           VCPKPRRLS+ K   +  AD+SLR+NL
Sbjct: 1   MNHCAILSNAFS-SHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNL 60

Query: 61  NHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFG 120
           +H VEQIDM  GPDLLDFLL +GGCSVDQS+TQLASSPPFLCGSPPSRVANPLIQDARFG
Sbjct: 61  SHQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIP 170
           DE+FIPF P+A PSGQLSPS TASRK  GGRVRASFGNKPTVRIEGFDC DRDRQNC IP
Sbjct: 121 DEKFIPFAPIASPSGQLSPS-TASRK--GGRVRASFGNKPTVRIEGFDCRDRDRQNCSIP 179

[Close]

BLAST of Sed0012892 vs. NCBI nr
Match: KAG6601286.1 (hypothetical protein SDJN03_06519, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271.6 bits (693), Expect = 4.7e-69
Identity = 142/183 (77.60%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNL 60
           MNHC ILSNAFS  HEEMR+PV           VCPKPRRLS+ K   +  AD+SLR+NL
Sbjct: 1   MNHCAILSNAFS-SHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNL 60

Query: 61  NHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFG 120
           +H VEQIDM  GPDLLDFLL +GGCSVDQS+TQLASSPPFLCGSPPSRVANPLIQDARFG
Sbjct: 61  SHQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIP 170
           DE+FIPF P+A PSGQLSPS TASRK  GGRVRASFGNKPTVRIEGFDC DRDRQNC IP
Sbjct: 121 DEKFIPFAPIASPSGQLSPS-TASRK--GGRVRASFGNKPTVRIEGFDCRDRDRQNCSIP 179

[Close]

BLAST of Sed0012892 vs. NCBI nr
Match: XP_023517111.1 (uncharacterized protein LOC111780963 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.2 bits (692), Expect = 6.2e-69
Identity = 142/183 (77.60%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNL 60
           MNHC ILSNAFS  HEEMR+PV           VCPKPRRLS+ K   +  AD+SLR+NL
Sbjct: 1   MNHCAILSNAFS-SHEEMRAPVPGPFSDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNL 60

Query: 61  NHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFG 120
           +H VEQIDM  GPDLLDFLL +GGCSVDQS+TQLASSPPFLCGSPPSRVANPLIQDARFG
Sbjct: 61  SHQVEQIDMGTGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIP 170
           DE+FIPF P+A PSGQLSPS TASRK  GGRVRASFGNKPTVRIEGFDC DRDRQNC IP
Sbjct: 121 DEKFIPFAPIASPSGQLSPS-TASRK--GGRVRASFGNKPTVRIEGFDCRDRDRQNCSIP 179

[Close]

BLAST of Sed0012892 vs. NCBI nr
Match: XP_022986983.1 (uncharacterized protein LOC111484540 [Cucurbita maxima])

HSP 1 Score: 268.9 bits (686), Expect = 3.1e-68
Identity = 141/183 (77.05%), Postives = 150/183 (81.97%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNL 60
           MNHC ILSNAFS  HEEMR PV           VCPKPRRLS+ K   +  AD+SLR+NL
Sbjct: 1   MNHCAILSNAFS-SHEEMRDPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNL 60

Query: 61  NHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFG 120
           +H VEQIDM  GPDLLDFLL +GGCSVDQS+TQLASSPPFLCGSPPSRVANPLIQDARFG
Sbjct: 61  SHQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIP 170
           DE+FIP  P+A PSGQLSPS TASRK  GGRVRASFGNKPTVRIEGFDC DRDRQNC IP
Sbjct: 121 DEKFIPLAPIASPSGQLSPS-TASRK--GGRVRASFGNKPTVRIEGFDCRDRDRQNCSIP 179

[Close]

BLAST of Sed0012892 vs. NCBI nr
Match: XP_004135095.1 (uncharacterized protein LOC101219538 [Cucumis sativus] >KGN52086.1 hypothetical protein Csa_007855 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 7.5e-67
Identity = 139/180 (77.22%), Postives = 149/180 (82.78%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRKLPGADTSLRFNLNHP 60
           MNHC ILSNAFS GHEEMR+ V           VCPKPRRL+      +DTSLR+NL+H 
Sbjct: 1   MNHCAILSNAFS-GHEEMRTSVPCPLSDFRDQLVCPKPRRLTVN--AHSDTSLRWNLSHQ 60

Query: 61  VEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFGDEQ 120
           VE IDM AGPDLLDFLL KGGCSVDQS+TQLASSPPFLCGSPPSRVANPLIQDARF +E+
Sbjct: 61  VEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEK 120

Query: 121 FIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA 170
           FIPF P+A PSGQLSPS T+SRK  GGRVRASFGNKPTVRIEGFDCLDRDRQNC IPAFA
Sbjct: 121 FIPFTPIASPSGQLSPS-TSSRK--GGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]

BLAST of Sed0012892 vs. ExPASy TrEMBL
Match: A0A6J1GZ47 (uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC111458833 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.3e-69
Identity = 142/183 (77.60%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNL 60
           MNHC ILSNAFS  HEEMR+PV           VCPKPRRLS+ K   +  AD+SLR+NL
Sbjct: 1   MNHCAILSNAFS-SHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNL 60

Query: 61  NHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFG 120
           +H VEQIDM  GPDLLDFLL +GGCSVDQS+TQLASSPPFLCGSPPSRVANPLIQDARFG
Sbjct: 61  SHQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIP 170
           DE+FIPF P+A PSGQLSPS TASRK  GGRVRASFGNKPTVRIEGFDC DRDRQNC IP
Sbjct: 121 DEKFIPFAPIASPSGQLSPS-TASRK--GGRVRASFGNKPTVRIEGFDCRDRDRQNCSIP 179

[Close]

BLAST of Sed0012892 vs. ExPASy TrEMBL
Match: A0A6J1JI50 (uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.5e-68
Identity = 141/183 (77.05%), Postives = 150/183 (81.97%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRK---LPGADTSLRFNL 60
           MNHC ILSNAFS  HEEMR PV           VCPKPRRLS+ K   +  AD+SLR+NL
Sbjct: 1   MNHCAILSNAFS-SHEEMRDPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNL 60

Query: 61  NHPVEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFG 120
           +H VEQIDM  GPDLLDFLL +GGCSVDQS+TQLASSPPFLCGSPPSRVANPLIQDARFG
Sbjct: 61  SHQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DEQFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIP 170
           DE+FIP  P+A PSGQLSPS TASRK  GGRVRASFGNKPTVRIEGFDC DRDRQNC IP
Sbjct: 121 DEKFIPLAPIASPSGQLSPS-TASRK--GGRVRASFGNKPTVRIEGFDCRDRDRQNCSIP 179

[Close]

BLAST of Sed0012892 vs. ExPASy TrEMBL
Match: A0A5D3CB96 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001020 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.7e-67
Identity = 139/180 (77.22%), Postives = 149/180 (82.78%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRKLPGADTSLRFNLNHP 60
           MNHC ILSNAFS GHEEMR+ V           VCPKPRRL+      +DTSLR+NL+H 
Sbjct: 1   MNHCAILSNAFS-GHEEMRTSVPCPISDFRDQLVCPKPRRLTVN--AHSDTSLRWNLSHQ 60

Query: 61  VEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFGDEQ 120
           VE IDM AGPDLLDFLL KGGCSVDQS+TQLASSPPFLCGSPPSRVANPLIQDARF +E+
Sbjct: 61  VEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEK 120

Query: 121 FIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA 170
           FIPF P+A PSGQLSPS T+SRK  GGRVRASFGNKPTVRIEGFDCLDRDRQNC IPAFA
Sbjct: 121 FIPFTPIASPSGQLSPS-TSSRK--GGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]

BLAST of Sed0012892 vs. ExPASy TrEMBL
Match: A0A0A0KWF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609720 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.7e-67
Identity = 139/180 (77.22%), Postives = 149/180 (82.78%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRKLPGADTSLRFNLNHP 60
           MNHC ILSNAFS GHEEMR+ V           VCPKPRRL+      +DTSLR+NL+H 
Sbjct: 1   MNHCAILSNAFS-GHEEMRTSVPCPLSDFRDQLVCPKPRRLTVN--AHSDTSLRWNLSHQ 60

Query: 61  VEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFGDEQ 120
           VE IDM AGPDLLDFLL KGGCSVDQS+TQLASSPPFLCGSPPSRVANPLIQDARF +E+
Sbjct: 61  VEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEK 120

Query: 121 FIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA 170
           FIPF P+A PSGQLSPS T+SRK  GGRVRASFGNKPTVRIEGFDCLDRDRQNC IPAFA
Sbjct: 121 FIPFTPIASPSGQLSPS-TSSRK--GGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]

BLAST of Sed0012892 vs. ExPASy TrEMBL
Match: A0A1S3BG95 (uncharacterized protein LOC103489287 OS=Cucumis melo OX=3656 GN=LOC103489287 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.7e-67
Identity = 139/180 (77.22%), Postives = 149/180 (82.78%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGHEEMRSPV-----------VCPKPRRLSHRKLPGADTSLRFNLNHP 60
           MNHC ILSNAFS GHEEMR+ V           VCPKPRRL+      +DTSLR+NL+H 
Sbjct: 1   MNHCAILSNAFS-GHEEMRTSVPCPISDFRDQLVCPKPRRLTVN--AHSDTSLRWNLSHQ 60

Query: 61  VEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFGDEQ 120
           VE IDM AGPDLLDFLL KGGCSVDQS+TQLASSPPFLCGSPPSRVANPLIQDARF +E+
Sbjct: 61  VEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEK 120

Query: 121 FIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNCRIPAFA 170
           FIPF P+A PSGQLSPS T+SRK  GGRVRASFGNKPTVRIEGFDCLDRDRQNC IPAFA
Sbjct: 121 FIPFTPIASPSGQLSPS-TSSRK--GGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]

BLAST of Sed0012892 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 147.9 bits (372), Expect = 7.3e-36
Identity = 90/186 (48.39%), Postives = 108/186 (58.06%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGH----------EEMRSPVVCPKPRRLSHR-KLPGADTSLRFNLNHP 60
           MNH  +  NAF+ G           E  ++ VVCPKPRR+  R        SLR   +H 
Sbjct: 1   MNHFAVQPNAFAAGGDLRSSSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRSLRCYFSHQ 60

Query: 61  VEQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSP-PFLCGSPPSRVANPLIQDARFGDE 120
           +E  +  A  D+LD +L K G   +Q   Q+  SP PFLCGSPPSRVANPL QDARF DE
Sbjct: 61  LELCESKAETDILDIILTKDGYGAEQVNKQVIDSPSPFLCGSPPSRVANPLTQDARFRDE 120

Query: 121 -----QFIPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKPTVRIEGFDCLDRDRQNC 170
                  IP     PPS   SPS+++ RK GG  VR +FGN P VR+EGFDCLDRD +NC
Sbjct: 121 IVSVSSVIPPQLGLPPSS--SPSSSSGRK-GGCVVRGNFGNSPKVRVEGFDCLDRDSRNC 180

[Close]

BLAST of Sed0012892 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-29
Identity = 80/182 (43.96%), Postives = 102/182 (56.04%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGHEEM----RSPVVCPKPRRLSHRKLPGADTSLRFNLNHPVEQI-DM 60
           MNHC +  NAF    E M    +  VVCPKPRR+           LR +++     + D 
Sbjct: 67  MNHCNLQQNAFMSREEMMGFDRKDLVVCPKPRRVG-LLANNVIRPLRLHMSQAAADLCDS 126

Query: 61  PAGPDLLDFLLAK-GGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFGDEQFIPFP 120
            AG +LL+ +  K    ++ Q    L+SSPP+  GSPPSR ANPL QDARF DE+  P  
Sbjct: 127 KAGAELLEIIRRKEDNGTIGQ---LLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPIS 186

Query: 121 PMAP------PSGQLSPSATASRKGGGGRVRASFG-NKPTVRIEGFDCLDRDRQNCRIPA 170
           P +P       +G  SPS+++S     G VR  FG N P VR+EGFDCL+RDRQN  IPA
Sbjct: 187 PNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDCLNRDRQNSSIPA 244

[Close]

BLAST of Sed0012892 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-28
Identity = 83/180 (46.11%), Postives = 95/180 (52.78%), Query Frame = 0


Query: 1   MNHCPILSNAFSGGHEEMR----------SPVVCPKPRRLSHRKLPGADTSLRFNLNHPV 60
           MNHC +  NAF    EE R            VVCPKPRR ++   P     L F+L+   
Sbjct: 1   MNHCSLQQNAFL-SREESRGFVPIYSHPVDSVVCPKPRRANNVIRP---FRLHFSLSGAD 60

Query: 61  EQIDMPAGPDLLDFLLAKGGCSVDQSYTQLASSPPFLCGSPPSRVANPLIQDARFGDEQF 120
           +  D  AG DLLD    K   S        + SPPF  GSPPSR ANPL QDARFGDE+ 
Sbjct: 61  DVCDSKAGEDLLDIFRRKESVS--------SRSPPFFLGSPPSRAANPLAQDARFGDEKL 120

Query: 121 IPFPPMAPPSGQLSPSATASRKGGGGRVRASFGNKP-TVRIEGFDCLDRDRQNCRIPAFA 170
               P   P   L PSA+  + G G   R  FG KP TVR+EGFDCL+RDR N  IPA A
Sbjct: 121 NTVSPSLSP---LLPSASRVKSGCG---RMKFGVKPATVRVEGFDCLNRDRPNSSIPAMA 162

[Close]

BLAST of Sed0012892 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24
Identity = 71/180 (39.44%), Postives = 95/180 (52.78%), Query Frame = 0


Query: 1   MNHCPILSNAF-----SGGHEEMRSPVVCPKPRR---LSHRKLPGADTSLRFNLNHPVEQ 60
           MN C I  NAF     +    + R  V+CPKPRR   L+H     +  SLR+ LNH +E 
Sbjct: 2   MNSCGIQQNAFEEMRRNAAVSDRRDAVICPKPRRVGALNHH----SSRSLRWQLNHQMEL 61

Query: 61  IDMPAGPDLLDFLLAK-GGCSVDQSYTQLASSPP-FLCGSPPSRVANPLIQDARFGDEQF 120
            +  +G ++LDF+L K GG   +Q  T+   +PP F  GSPPSRV+NPL +D+ F +E  
Sbjct: 62  CESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREELL 121

Query: 121 IPFPPMAPPSGQLSPSATASRKGGGGRVRA-SFGNKPTVRIEGFDCLDRDRQNCRIPAFA 170
           +   P         P   +S + G   + A SFGN P VR+ GFDC DR   N  I   A
Sbjct: 122 MVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC-DRRSSNRSISTLA 176

[Close]

BLAST of Sed0012892 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24
Identity = 71/180 (39.44%), Postives = 95/180 (52.78%), Query Frame = 0


Query: 1   MNHCPILSNAF-----SGGHEEMRSPVVCPKPRR---LSHRKLPGADTSLRFNLNHPVEQ 60
           MN C I  NAF     +    + R  V+CPKPRR   L+H     +  SLR+ LNH +E 
Sbjct: 2   MNSCGIQQNAFEEMRRNAAVSDRRDAVICPKPRRVGALNHH----SSRSLRWQLNHQMEL 61

Query: 61  IDMPAGPDLLDFLLAK-GGCSVDQSYTQLASSPP-FLCGSPPSRVANPLIQDARFGDEQF 120
            +  +G ++LDF+L K GG   +Q  T+   +PP F  GSPPSRV+NPL +D+ F +E  
Sbjct: 62  CESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREELL 121

Query: 121 IPFPPMAPPSGQLSPSATASRKGGGGRVRA-SFGNKPTVRIEGFDCLDRDRQNCRIPAFA 170
           +   P         P   +S + G   + A SFGN P VR+ GFDC DR   N  I   A
Sbjct: 122 MVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC-DRRSSNRSISTLA 176

The following BLAST results are available for this feature:

BLAST of Sed0012892 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957437.1	4.7e-69	77.60	uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothet...	[more]
KAG6601286.1	4.7e-69	77.60	hypothetical protein SDJN03_06519, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023517111.1	6.2e-69	77.60	uncharacterized protein LOC111780963 [Cucurbita pepo subsp. pepo]	[more]
XP_022986983.1	3.1e-68	77.05	uncharacterized protein LOC111484540 [Cucurbita maxima]	[more]
XP_004135095.1	7.5e-67	77.22	uncharacterized protein LOC101219538 [Cucumis sativus] >KGN52086.1 hypothetical ...	[more]

BLAST of Sed0012892 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0012892 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZ47	2.3e-69	77.60	uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC1114588...	[more]
A0A6J1JI50	1.5e-68	77.05	uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540...	[more]
A0A5D3CB96	3.7e-67	77.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KWF7	3.7e-67	77.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609720 PE=4 SV=1	[more]
A0A1S3BG95	3.7e-67	77.22	uncharacterized protein LOC103489287 OS=Cucumis melo OX=3656 GN=LOC103489287 PE=...	[more]

BLAST of Sed0012892 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68490.1	7.3e-36	48.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G16110.1	1.8e-29	43.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02555.1	1.9e-28	46.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.1	1.3e-24	39.44	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	1.3e-24	39.44	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..106
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 5..133
None	No IPR available	PANTHER	PTHR33384:SF18	BNAA07G24630D PROTEIN	coord: 5..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012892.1	Sed0012892.1	mRNA
Sed0012892.2	Sed0012892.2	mRNA
Sed0012892.3	Sed0012892.3	mRNA