Sed0012834 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCTCATTCTACTCTCTGTCTTGGCTTTCTTGGTTCCAAGTTCCCTGCTGGTGGAAATTCAAGCTTCTCATTCCCATCCAAGAAGAACATACTCTCAGATTACTGTCATGGGTCTTGTTTATTGTGACACCTGCTCCAACAACACCTTTTCCAAACACAGTTACTTCTTATCAGGTAAGCTGAAATTCATTTTAGTTAAGCCAAAGCTAAAGTTCAAGTCCTGATTTCAACAACTTGAACCTGAACTAGAATCCAAATGGACTAGTGTCTTCTTTGCAGAAGGAATGGTTTTTGTAGTTATGCTGTTCTTTTGTTTAGACTTTAATCTTCTTCAGGTTTTTTTATTTTGGGTTTGGGTTTGATCTTCTTTTTGCTTTTCAAAGCTTTGGTATGGCAGTTTCAATGTCTGATATGTTGAGTTTTTGTGCGTTTCTAGCGAGATTTTTTAGGTCCCATAGGTTTTTTTGTTTTTTGATTTTGAAAATAAAGATTGTTTTCTTCCAACTTCTCTCTAATGATTTTCTCTCTCTTAAAGAAGCATTTGAATTCCTATTCATATACTTAAAACAAAAATAAGTTTTTTGAAATGAAAAATACTTTTTGGTTTTTGAAATTTAAGCTTTGGGTTATTTTTTCTCACACAAATTCTCTATAAAATGCTCTTTTCTTTCCTTTTTCTTCTGTTGAAGAAACTACAAAATAGAAAATTTTCTCTTAAGAAAGTATTAGAATCCTAACCAAATTCGAAAAACCAAAACAAGTTTTTAGAAGCTAATTTTTTTTAGTTTTCAAATTTTAGTTTGATTTAAAAAAATATAAGTAAAATGTAGGTATGAAAGTAAGGAAAACCATAGGTTGTAAGCTTGATTTTCAAAAACAAAATGGTTGACACTTTTTATTTGAAACAAGGTCACCACGCCAGTCCCTAAGCCAGGCACCGGAAGACATCGAAGGAGTAATATCACAGCTGAGTCTCGAACCGGGATCTTAAGGGGAGCATATCCTCAAAGCCCAAGTTTTCAATCACTGTGCCACCCCTTAGGGACGAACACGACTCACTTTTTGAAAACATATGTTGTATTTATAGACCTAACTTTCAAAACCCAAATGTTATCAAACCAGGATTTAAGCGTTATGTTGAATAGATTTCTAGTATTCTAGACAAATTTTCTAATCTAATTTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAGCATGGATTCAACAACAAACAGCTGATACTCGTTTCTGCACTGCGTTTACATTAATCCATGAACAAAAAAACCAGGCGCAGAGGTACGAATCGAGTGCAAATTGAAAGCAGAAACGCCGCGAACGGCGGAGCAGATAGCGTTCTCAGTGAACAGAACAACGAACAAAAACGGACTTTACAAACTGGAGATACCTTCGATGGACGGAATCCGATGCGCAGAGGATTCGGCGATCATGTCGTTCTGCCAGGCGAGTTTGATGGGAAGTTCATCGGAATCTTGCAACGTTCCTGGATACAGAACCACGTCGGGAGAGATTTCGATCAAATCGAGGCAAGAAAACATCTGCATTTACAGTTTGAATCCGCTCAATTACAGGCCCTCTGCTAGAGATGATACCTTGTGTGGGAATTAG ATGAATCTCATTCTACTCTCTGTCTTGGCTTTCTTGGTTCCAAGTTCCCTGCTGGTGGAAATTCAAGCTTCTCATTCCCATCCAAGAAGAACATACTCTCAGATTACTGTCATGGGTCTTGTTTATTGTGACACCTGCTCCAACAACACCTTTTCCAAACACAGTTACTTCTTATCAGGCGCAGAGGTACGAATCGAGTGCAAATTGAAAGCAGAAACGCCGCGAACGGCGGAGCAGATAGCGTTCTCAGTGAACAGAACAACGAACAAAAACGGACTTTACAAACTGGAGATACCTTCGATGGACGGAATCCGATGCGCAGAGGATTCGGCGATCATGTCGTTCTGCCAGGCGAGTTTGATGGGAAGTTCATCGGAATCTTGCAACGTTCCTGGATACAGAACCACGTCGGGAGAGATTTCGATCAAATCGAGGCAAGAAAACATCTGCATTTACAGTTTGAATCCGCTCAATTACAGGCCCTCTGCTAGAGATGATACCTTGTGTGGGAATTAG ATGAATCTCATTCTACTCTCTGTCTTGGCTTTCTTGGTTCCAAGTTCCCTGCTGGTGGAAATTCAAGCTTCTCATTCCCATCCAAGAAGAACATACTCTCAGATTACTGTCATGGGTCTTGTTTATTGTGACACCTGCTCCAACAACACCTTTTCCAAACACAGTTACTTCTTATCAGGCGCAGAGGTACGAATCGAGTGCAAATTGAAAGCAGAAACGCCGCGAACGGCGGAGCAGATAGCGTTCTCAGTGAACAGAACAACGAACAAAAACGGACTTTACAAACTGGAGATACCTTCGATGGACGGAATCCGATGCGCAGAGGATTCGGCGATCATGTCGTTCTGCCAGGCGAGTTTGATGGGAAGTTCATCGGAATCTTGCAACGTTCCTGGATACAGAACCACGTCGGGAGAGATTTCGATCAAATCGAGGCAAGAAAACATCTGCATTTACAGTTTGAATCCGCTCAATTACAGGCCCTCTGCTAGAGATGATACCTTGTGTGGGAATTAG MNLILLSVLAFLVPSSLLVEIQASHSHPRRTYSQITVMGLVYCDTCSNNTFSKHSYFLSGAEVRIECKLKAETPRTAEQIAFSVNRTTNKNGLYKLEIPSMDGIRCAEDSAIMSFCQASLMGSSSESCNVPGYRTTSGEISIKSRQENICIYSLNPLNYRPSARDDTLCGN Homology
BLAST of Sed0012834 vs. NCBI nr
Match: XP_038896993.1 (major pollen allergen Ole e 1-like [Benincasa hispida]) HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79 Identity = 151/171 (88.30%), Postives = 160/171 (93.57%), Query Frame = 0
BLAST of Sed0012834 vs. NCBI nr
Match: XP_008450135.1 (PREDICTED: major pollen allergen Ole e 1-like [Cucumis melo]) HSP 1 Score: 303.9 bits (777), Expect = 8.7e-79 Identity = 153/172 (88.95%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of Sed0012834 vs. NCBI nr
Match: XP_004148007.1 (major pollen allergen Ole e 1 [Cucumis sativus] >KGN58156.1 hypothetical protein Csa_017432 [Cucumis sativus]) HSP 1 Score: 298.9 bits (764), Expect = 2.8e-77 Identity = 151/172 (87.79%), Postives = 159/172 (92.44%), Query Frame = 0
BLAST of Sed0012834 vs. NCBI nr
Match: XP_023527407.1 (major pollen allergen Ole e 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 297.7 bits (761), Expect = 6.2e-77 Identity = 147/171 (85.96%), Postives = 159/171 (92.98%), Query Frame = 0
BLAST of Sed0012834 vs. NCBI nr
Match: XP_022983553.1 (major pollen allergen Ole e 1-like [Cucurbita maxima]) HSP 1 Score: 297.4 bits (760), Expect = 8.1e-77 Identity = 146/171 (85.38%), Postives = 160/171 (93.57%), Query Frame = 0
BLAST of Sed0012834 vs. ExPASy Swiss-Prot
Match: P19963 (Major pollen allergen Ole e 1 OS=Olea europaea OX=4146 PE=1 SV=2) HSP 1 Score: 55.8 bits (133), Expect = 5.4e-07 Identity = 36/133 (27.07%), Postives = 58/133 (43.61%), Query Frame = 0
BLAST of Sed0012834 vs. ExPASy Swiss-Prot
Match: O82015 (Major pollen allergen Lig v 1 OS=Ligustrum vulgare OX=13597 PE=1 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05 Identity = 36/133 (27.07%), Postives = 57/133 (42.86%), Query Frame = 0
BLAST of Sed0012834 vs. ExPASy Swiss-Prot
Match: Q6NMJ2 (Pollen-specific protein-like At4g18596 OS=Arabidopsis thaliana OX=3702 GN=At4g18596 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 6.6e-05 Identity = 22/67 (32.84%), Postives = 37/67 (55.22%), Query Frame = 0
BLAST of Sed0012834 vs. ExPASy Swiss-Prot
Match: P33050 (Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.1e-04 Identity = 32/124 (25.81%), Postives = 58/124 (46.77%), Query Frame = 0
BLAST of Sed0012834 vs. ExPASy Swiss-Prot
Match: O49813 (Olee1-like protein OS=Betula pendula OX=3505 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 7.3e-04 Identity = 29/97 (29.90%), Postives = 47/97 (48.45%), Query Frame = 0
BLAST of Sed0012834 vs. ExPASy TrEMBL
Match: A0A1S3BPJ6 (major pollen allergen Ole e 1-like OS=Cucumis melo OX=3656 GN=LOC103491809 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 4.2e-79 Identity = 153/172 (88.95%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of Sed0012834 vs. ExPASy TrEMBL
Match: A0A0A0LDJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G563290 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 1.4e-77 Identity = 151/172 (87.79%), Postives = 159/172 (92.44%), Query Frame = 0
BLAST of Sed0012834 vs. ExPASy TrEMBL
Match: A0A6J1J823 (major pollen allergen Ole e 1-like OS=Cucurbita maxima OX=3661 GN=LOC111482122 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 3.9e-77 Identity = 146/171 (85.38%), Postives = 160/171 (93.57%), Query Frame = 0
BLAST of Sed0012834 vs. ExPASy TrEMBL
Match: A0A6J1JGM9 (pollen-specific protein-like At4g18596 OS=Cucurbita maxima OX=3661 GN=LOC111486731 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 5.1e-77 Identity = 147/171 (85.96%), Postives = 157/171 (91.81%), Query Frame = 0
BLAST of Sed0012834 vs. ExPASy TrEMBL
Match: A0A6J1ENF6 (pollen-specific protein-like At4g18596 OS=Cucurbita moschata OX=3662 GN=LOC111435137 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 8.8e-77 Identity = 147/171 (85.96%), Postives = 156/171 (91.23%), Query Frame = 0
BLAST of Sed0012834 vs. TAIR 10
Match: AT5G13140.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 171.0 bits (432), Expect = 8.2e-43 Identity = 76/142 (53.52%), Postives = 110/142 (77.46%), Query Frame = 0
BLAST of Sed0012834 vs. TAIR 10
Match: AT3G26960.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 170.6 bits (431), Expect = 1.1e-42 Identity = 88/174 (50.57%), Postives = 117/174 (67.24%), Query Frame = 0
BLAST of Sed0012834 vs. TAIR 10
Match: AT5G41050.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 166.8 bits (421), Expect = 1.5e-41 Identity = 84/171 (49.12%), Postives = 119/171 (69.59%), Query Frame = 0
BLAST of Sed0012834 vs. TAIR 10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 62.8 bits (151), Expect = 3.1e-10 Identity = 40/136 (29.41%), Postives = 67/136 (49.26%), Query Frame = 0
BLAST of Sed0012834 vs. TAIR 10
Match: AT5G45880.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 50.1 bits (118), Expect = 2.1e-06 Identity = 27/88 (30.68%), Postives = 44/88 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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