Sed0012832 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAGAGTGCATTGAATACAAGTGAGAGTTATCAAAATCTTTCCTTTCTTTCTTGCAACTCCTTGTGTAGATTCTTTTGTTTTTGCTCTAGATATTCCATAAAGCGAAGCTCGCGATGTGCATAGCCGCGTTTCTATGGCAATCTCATCCGCTGTATCCATTCCTCCTTCTCCTCAACCGCGACGAATATCACAGCAGGTTCGTCCAATTCATTTTCGTGGGGAATCGATTCATCGTTTCAGATTGTGTGAAATTGCTGTGGATTTTCCTTTTCAGGCCCACGAAGCTGCTGGAATGGTGGGAATGTGGCGAAATTTTGGGCGGAAGAGATGAACTGGCCGGCGGGACGTGGCTGGCTTGCTCCAGAAATGGCAGAGTTGCATTCCTTACAAATTTCAGGGAGGTTGAGTTGATTTCTCAGGCTAGGAGCAGAGGAGAGCTCCCCGTTCGTTTCTTGAAGGTAACATGAATTTGGTCAAGATTGGTTTCGTTAAATTACTTTCGAAAATTCATTGTTGTTCAAATATGCCATTTCTATATCGAGATTAGTAATCTGATAGAGTTTCGAAGGCAACGAACTGGAATTTGAATTCTTCCAAAGGGGTTTTTTTGACCTGTTTGCAAGCAGGCCCCTGTGCAAGATTGCTAACCAATCTTACTAATAACAAAGTAGCTGCTGGTTTTGTTTCATTGCTCTGTGTATTGGTGTATTAAGAAAGTTGATGGAGATTGAAGACTGAACATGCTCATTTTGTTTGTGCTCTGTACTAGTGAATAGGAAAAGTGAAAAGGAAAAGCTGATTGAAATTACTAATAATGGATGGAGATTGAAGATAGAACATGCTAGTCTCTCTTGATTGGAGACCCTTTTTATTGGGTTTCCTCATTTTTTGTGGGCTCTGATTTTGTATGCCCCTTTCTCTCTTTTTGCTGTTGTATTTTCCTTTCATTTTTTCTCAATGGAAGTCTGTGTTTTTCATTAAAAAAAATTGCTAGTTTTGTTTGTGCTGTGTACTAGTGAATAGAAATACTGAAAAGGAAAAGTTGATAGAAATTGCTAATGATGGATATGGAGATAGAAGAGAATTGCTACTTTTGTTTGTACTGTCTACCAGTGAATAGGAAAAGCTGGTTGAGTTCACTAATGGTGGATGAAAATAGAAGGTTGAACATGTTACTTTTGTGTTGTGTACTAGTGAAATAGGAGAAGCTATGATGGATGATTGAAGATAGAACATGTTTAACTTTCCTCTTGTCTTTTTTATCAGAGAATGCAAATAATGACATTCTTATTAGTTATTGGCAATAAGGACATAGTTCTCCCTATATTCATTTTCATTCTCTTTGCCCAAACACCCCGTTAGTAGTATAATAGTAAGTGGAATTGAAGAAGACACCAAATGAGCCAGACACCACTTTTCATGATAACCATCTTCATAAAGTTAACAAAAAGTGATTTCGGCGTATGATTTACTTATTTGACCGATGGTCTTTTCAATGAAATGCTAACAGAAAACTGTACGTGATAAAGCTAACAAGGCAGAATTCACAGCATTTGATTGTTCTGTATTTTTGTCTTAGCAGAGCAAGAAGACTCCCCACGGCTTCGCCAAAGAAGTTACAAATGAGGCAAACCAGTACAACGGTTTCAACCTAATAATCGCCGACATTTCTTCCAAAACCATGTTCTATATCACCAACAGACCGCCAAACAACAGCGACAGCCTTGTCACTGAGGTTTCCCACGGCGTTCACGTCATCACAAATGCACAACTCGACTCTCCATGGCCCAAGGCAAGACAGAAAACATCTCAATTCCATTTTTTGAAGTTTCTACAACTTTTATGAGTCTCGAAACTGATAGTAGTGGTTCAACATAGAAGTTCTCAATCTCCTTTGGCACTATGAATCGTTGGACTTTGTTAAAATATCACATGCGAAGAATATAAATAAATGTGTAACTATGTTGTTACCCATCAGAAACAAGTTTTGCTTTGGTAGGCTTCTATTTGGAGACTCGTTAAAATATTTGCCCGATTGTTTAGGCACTGCGACTGGACCAGAGTTTCAGAGAGTTTATGAACAAAAATGGCGATGAGGAACTTCCAGTTAAAGAGATGATTGAAAAGCTAATGACCAACACAGTTAAAGACGACGTGAGCTTGTTACCCGGCATCTATTCTCCTCGAAGAGAATATCAATACAGTTCCATATTTGTTGATACAGACACAGAACTGGTAAAGAAAACGAAAGTGATGTTTTTAGAGTTTCCTGATATGTATCATGATTTGGCCTAATGATCAATGAAGGTCAGTCCGTTGTTGTAGGTTCAATCCATGGTAGCTATTTATCTAAAATACTTTCCTATCATTTCTTGACATTCAATGTTATAGAATCGTAATATGTTCCGTGAAAATAGTCGAGCTGCACGTAAGCTAGCCCAGACACTCATGGATATATATATATATATATATATATATATATATATATATATAAATAAAATCTTTTAAAAAAAATCATGGAGAAATTGATGTATGGGTTTGCTCCATTTTGTTTCTCAGGGACGTTATGGAACTGGAAGTATATCTGCTTTGTCTGTGAAGAACAGTGGGGAAGCTTCCTTCTTTGAGAGGCGTTTGGAGAACGATGACTGGATCGACAGCAGCTTTACCTTCCAGATTGAGAACTTCTGAATCCTTTTCGAGGTGAGTTCGGTTCCATAATCTTAAGCTTCTTTTTTTTCTTTGAATAAAGAATCATGAAGGAAAATGGAAATTGTATAGTTTTTTTTTTTGAAGCAAGGTAATTACGCCCGTCCTTAAGCCAGACTTGAGTAATGTCACTGGTGAGTTTCAAACCCAGAACCTTGAGGGAAGCATATCTTCAAAGCCCAAGTCTTCAACCACTGTGCTACCCCTTAGAGACGAATTGTGTAGCAGAAAAGGGTGAAAGTATACATCTAAAAAAGATTGTAATTTTCAATTTACTAAATATCCTAGTTAATTTATTTCTGAGTTCCAATTAGAAGCAACCTTTAGGAAGGGTCTGTCGCAAGGGGATGAAAGAGAGAGAATGAGAAGGAGGATGATTCTCAGTGTTAGGGTACGAAAATCATTTTTCCCATAATCACATTTCTCAAAATCATCTTTTTATTCTCTTCCAAAATATATTTTACTTTCATCATACACATTATTTTATTTTCTCCATTATTATTCATTTCACCTCAAATATAAATAATCTTTGTCCCCAT CAAAGAGTGCATTGAATACAAGTGAGAGTTATCAAAATCTTTCCTTTCTTTCTTGCAACTCCTTGTGTAGATTCTTTTGTTTTTGCTCTAGATATTCCATAAAGCGAAGCTCGCGATGTGCATAGCCGCGTTTCTATGGCAATCTCATCCGCTGTATCCATTCCTCCTTCTCCTCAACCGCGACGAATATCACAGCAGGCCCACGAAGCTGCTGGAATGGTGGGAATGTGGCGAAATTTTGGGCGGAAGAGATGAACTGGCCGGCGGGACGTGGCTGGCTTGCTCCAGAAATGGCAGAGTTGCATTCCTTACAAATTTCAGGGAGGTTGAGTTGATTTCTCAGGCTAGGAGCAGAGGAGAGCTCCCCGTTCGTTTCTTGAAGAGCAAGAAGACTCCCCACGGCTTCGCCAAAGAAGTTACAAATGAGGCAAACCAGTACAACGGTTTCAACCTAATAATCGCCGACATTTCTTCCAAAACCATGTTCTATATCACCAACAGACCGCCAAACAACAGCGACAGCCTTGTCACTGAGGTTTCCCACGGCGTTCACGTCATCACAAATGCACAACTCGACTCTCCATGGCCCAAGGCACTGCGACTGGACCAGAGTTTCAGAGAGTTTATGAACAAAAATGGCGATGAGGAACTTCCAGTTAAAGAGATGATTGAAAAGCTAATGACCAACACAGTTAAAGACGACGTGAGCTTGTTACCCGGCATCTATTCTCCTCGAAGAGAATATCAATACAGTTCCATATTTGTTGATACAGACACAGAACTGGGACGTTATGGAACTGGAAGTATATCTGCTTTGTCTGTGAAGAACAGTGGGGAAGCTTCCTTCTTTGAGAGGCGTTTGGAGAACGATGACTGGATCGACAGCAGCTTTACCTTCCAGATTGAGAACTTCTGAATCCTTTTCGAGGTAATTACGCCCGTCCTTAAGCCAGACTTGAGTAATGTCACTGGTGAGTTTCAAACCCAGAACCTTGAGGGAAGCATATCTTCAAAGCCCAAGTCTTCAACCACTGTGCTACCCCTTAGAGACGAATTGTGTAGCAGAAAAGGGTGAAAGTATACATCTAAAAAAGATTGTAATTTTCAATTTACTAAATATCCTAGTTAATTTATTTCTGAGTTCCAATTAGAAGCAACCTTTAGGAAGGGTCTGTCGCAAGGGGATGAAAGAGAGAGAATGAGAAGGAGGATGATTCTCAGTGTTAGGGTACGAAAATCATTTTTCCCATAATCACATTTCTCAAAATCATCTTTTTATTCTCTTCCAAAATATATTTTACTTTCATCATACACATTATTTTATTTTCTCCATTATTATTCATTTCACCTCAAATATAAATAATCTTTGTCCCCAT ATGTGCATAGCCGCGTTTCTATGGCAATCTCATCCGCTGTATCCATTCCTCCTTCTCCTCAACCGCGACGAATATCACAGCAGGCCCACGAAGCTGCTGGAATGGTGGGAATGTGGCGAAATTTTGGGCGGAAGAGATGAACTGGCCGGCGGGACGTGGCTGGCTTGCTCCAGAAATGGCAGAGTTGCATTCCTTACAAATTTCAGGGAGGTTGAGTTGATTTCTCAGGCTAGGAGCAGAGGAGAGCTCCCCGTTCGTTTCTTGAAGAGCAAGAAGACTCCCCACGGCTTCGCCAAAGAAGTTACAAATGAGGCAAACCAGTACAACGGTTTCAACCTAATAATCGCCGACATTTCTTCCAAAACCATGTTCTATATCACCAACAGACCGCCAAACAACAGCGACAGCCTTGTCACTGAGGTTTCCCACGGCGTTCACGTCATCACAAATGCACAACTCGACTCTCCATGGCCCAAGGCACTGCGACTGGACCAGAGTTTCAGAGAGTTTATGAACAAAAATGGCGATGAGGAACTTCCAGTTAAAGAGATGATTGAAAAGCTAATGACCAACACAGTTAAAGACGACGTGAGCTTGTTACCCGGCATCTATTCTCCTCGAAGAGAATATCAATACAGTTCCATATTTGTTGATACAGACACAGAACTGGGACGTTATGGAACTGGAAGTATATCTGCTTTGTCTGTGAAGAACAGTGGGGAAGCTTCCTTCTTTGAGAGGCGTTTGGAGAACGATGACTGGATCGACAGCAGCTTTACCTTCCAGATTGAGAACTTCTGA MCIAAFLWQSHPLYPFLLLLNRDEYHSRPTKLLEWWECGEILGGRDELAGGTWLACSRNGRVAFLTNFREVELISQARSRGELPVRFLKSKKTPHGFAKEVTNEANQYNGFNLIIADISSKTMFYITNRPPNNSDSLVTEVSHGVHVITNAQLDSPWPKALRLDQSFREFMNKNGDEELPVKEMIEKLMTNTVKDDVSLLPGIYSPRREYQYSSIFVDTDTELGRYGTGSISALSVKNSGEASFFERRLENDDWIDSSFTFQIENF Homology
BLAST of Sed0012832 vs. NCBI nr
Match: KAG6604975.1 (Transport and Golgi organization protein 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 491.1 bits (1263), Expect = 6.0e-135 Identity = 237/266 (89.10%), Postives = 248/266 (93.23%), Query Frame = 0
BLAST of Sed0012832 vs. NCBI nr
Match: XP_022971076.1 (transport and Golgi organization protein 2 homolog [Cucurbita maxima] >XP_022971077.1 transport and Golgi organization protein 2 homolog [Cucurbita maxima]) HSP 1 Score: 489.2 bits (1258), Expect = 2.3e-134 Identity = 236/266 (88.72%), Postives = 248/266 (93.23%), Query Frame = 0
BLAST of Sed0012832 vs. NCBI nr
Match: XP_022947387.1 (transport and Golgi organization protein 2 homolog [Cucurbita moschata] >XP_022947388.1 transport and Golgi organization protein 2 homolog [Cucurbita moschata]) HSP 1 Score: 487.3 bits (1253), Expect = 8.6e-134 Identity = 235/266 (88.35%), Postives = 246/266 (92.48%), Query Frame = 0
BLAST of Sed0012832 vs. NCBI nr
Match: XP_023532494.1 (transport and Golgi organization protein 2 homolog [Cucurbita pepo subsp. pepo] >XP_023532495.1 transport and Golgi organization protein 2 homolog [Cucurbita pepo subsp. pepo] >XP_023532496.1 transport and Golgi organization protein 2 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 482.3 bits (1240), Expect = 2.8e-132 Identity = 232/265 (87.55%), Postives = 245/265 (92.45%), Query Frame = 0
BLAST of Sed0012832 vs. NCBI nr
Match: XP_022140668.1 (transport and Golgi organization 2 homolog [Momordica charantia]) HSP 1 Score: 465.7 bits (1197), Expect = 2.7e-127 Identity = 220/265 (83.02%), Postives = 244/265 (92.08%), Query Frame = 0
BLAST of Sed0012832 vs. ExPASy Swiss-Prot
Match: Q29RZ5 (Transport and Golgi organization protein 2 homolog OS=Bos taurus OX=9913 GN=TANGO2 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.3e-27 Identity = 89/286 (31.12%), Postives = 142/286 (49.65%), Query Frame = 0
BLAST of Sed0012832 vs. ExPASy Swiss-Prot
Match: Q6ICL3 (Transport and Golgi organization protein 2 homolog OS=Homo sapiens OX=9606 GN=TANGO2 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 5.6e-27 Identity = 93/286 (32.52%), Postives = 145/286 (50.70%), Query Frame = 0
BLAST of Sed0012832 vs. ExPASy Swiss-Prot
Match: P54797 (Transport and Golgi organization 2 homolog OS=Mus musculus OX=10090 GN=Tango2 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26 Identity = 88/286 (30.77%), Postives = 146/286 (51.05%), Query Frame = 0
BLAST of Sed0012832 vs. ExPASy Swiss-Prot
Match: P53275 (Uncharacterized protein YGR127W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YGR127W PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 3.9e-04 Identity = 38/136 (27.94%), Postives = 57/136 (41.91%), Query Frame = 0
BLAST of Sed0012832 vs. ExPASy TrEMBL
Match: A0A6J1I2B1 (transport and Golgi organization protein 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111469854 PE=4 SV=1) HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134 Identity = 236/266 (88.72%), Postives = 248/266 (93.23%), Query Frame = 0
BLAST of Sed0012832 vs. ExPASy TrEMBL
Match: A0A6J1G6B2 (transport and Golgi organization protein 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111451268 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 4.2e-134 Identity = 235/266 (88.35%), Postives = 246/266 (92.48%), Query Frame = 0
BLAST of Sed0012832 vs. ExPASy TrEMBL
Match: A0A6J1CII2 (transport and Golgi organization 2 homolog OS=Momordica charantia OX=3673 GN=LOC111011269 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.3e-127 Identity = 220/265 (83.02%), Postives = 244/265 (92.08%), Query Frame = 0
BLAST of Sed0012832 vs. ExPASy TrEMBL
Match: A0A2N9FED1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13380 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 1.1e-99 Identity = 178/264 (67.42%), Postives = 212/264 (80.30%), Query Frame = 0
BLAST of Sed0012832 vs. ExPASy TrEMBL
Match: A0A1Q3D923 (NRDE domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32169 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 2.0e-99 Identity = 178/265 (67.17%), Postives = 209/265 (78.87%), Query Frame = 0
BLAST of Sed0012832 vs. TAIR 10
Match: AT4G38260.1 (Protein of unknown function (DUF833) ) HSP 1 Score: 320.5 bits (820), Expect = 1.3e-87 Identity = 153/270 (56.67%), Postives = 199/270 (73.70%), Query Frame = 0
BLAST of Sed0012832 vs. TAIR 10
Match: AT1G20680.2 (Protein of unknown function (DUF833) ) HSP 1 Score: 112.8 bits (281), Expect = 4.1e-25 Identity = 83/272 (30.51%), Postives = 135/272 (49.63%), Query Frame = 0
BLAST of Sed0012832 vs. TAIR 10
Match: AT1G20730.1 (Protein of unknown function (DUF833) ) HSP 1 Score: 108.6 bits (270), Expect = 7.8e-24 Identity = 102/274 (37.23%), Postives = 134/274 (48.91%), Query Frame = 0
BLAST of Sed0012832 vs. TAIR 10
Match: AT1G20740.1 (Protein of unknown function (DUF833) ) HSP 1 Score: 106.7 bits (265), Expect = 3.0e-23 Identity = 90/247 (36.44%), Postives = 120/247 (48.58%), Query Frame = 0
BLAST of Sed0012832 vs. TAIR 10
Match: AT1G20680.1 (Protein of unknown function (DUF833) ) HSP 1 Score: 83.6 bits (205), Expect = 2.7e-16 Identity = 67/237 (28.27%), Postives = 115/237 (48.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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