Sed0012823 (gene) Chayote v1

Overview


Name	Sed0012823
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DUF4283 domain-containing protein
Location	LG10: 26734587 .. 26751645 (+)
RNA-Seq Expression	Sed0012823
Synteny	Sed0012823

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATCAACCTTTTTCATGCAGACAATGCTCTCTTTGCTCTTAGAACAGAAGACTACACCAAATTGCTTTCCAACAACACAGGTTGGGTGACTATTGAATCTATTAATAAAAAATTTGAAAGATGGGATCCTCTCATTCATGCAACTCCCACAGTCTTCCCTAATTATGGGGGTTGGCTTCGTTTTCGTGGAGTCCCTTTACATATGTGGAATCATGACACTTTCAAAATTATTGGGGACATATGCAGTGGTTTACTGAAAGTTGGGAACACAGTTGATAATGGAATGGACCTTACTGAAGTTCGTCTCAAAGTCTGCGAAAATTATAGGGGTTTCATCCCCCTCAATATTGGCATAATAGATGCAGATGGATCAAATTATGTGGTTCATACGATCTCGCCGGCGTCGGGCTGTTGGAGGATTGGTAGGAACCCTAAAGTTCATTTAACTTTCTCGCGTGAAGTGGTAGCTAGTTTCGATATTCACAAACCTAGCTCTGAACACTACAACATCAAAGGACATATAACTTATCTGATCTCCCAAACTACTTTCGTTGGAGTTCCATAAAAAACTGACAAAAGACAGTTGCTTATATAAATGAGGGTTGATGAAGTTCGTCGGGCGGAAAACAAAGGAAAAGAGAAGGGGTGATTAGACAAATGTCTAGTTTTTGGAAAATAAAACATCAAATGTTTGGTCTTTTTACTCATTTAAATTTATATCTACTTTTAATATTCTGGAATTTTATGATTAAATCAATGACATTTGTACCATTTTTATGTATTTGTATTTTAAATATTTAATATTCTCAATAAAGATATCAACTAACTCCCTATAATTAGGATAACAAAAAATACAGGATGAAAATATACATAATAAAAAAATACGTTGAAGATTTGAAATATGGAATTTAAAATTGATTTAAAAAACAAAAAAAATCGAAATTTAAAAATAGCTCTTTGAATCTCTTCCAACCATTTACATATGAATACATATTATGGCAGAATGGAGGTCGGATAATTAATTGATATGAAAAAAACTAATTAAGGAATTGAATGTTTACCTCACATGCAACCAACTACTTTTTTTTTAACCTACTACCTCTTTTTTTTTTGTTTGAGATCGTTTGGATCTTTCTGAAACCCCAAAGGATCAAGTTACTCTTCTTCCCCACCGTGTGAACCCTTGAATTCGTCCATCTCCTCCCCACCGGACACGAAGCACATCTACCAACATCTAGAGCGTCCAAAGTTACTCTTAAATTATAACCTTCAGAATCGAAATATACGAGATGAGAAAATACGTTGAAAATTTGAATTTTGAAATTTAAAATAACTCTCTAATTCCCTTCCAACCATTTACATATGCGCACATATGGTTTCCTGATACGGGTTGGAATTTTGAATTGATAGAAACAAAAATTAAGAAATTGAATGCTTATCTGACATGCAGACCTATCATCATTATTTGGCAACCACTTATTAATTTTGAGACCGTTCTGATTTTCTGAAATCCAAATGACCATAGCTTCTGAACCTATCCATCTCCCCCTTCTACGATAAAACACCTTCAAATACATCTGCCAGTGTGTATGAAGTTCTATTCTCTTCTACACCATAAGAGAGAGCTTTCCCCACAACTTCCATGACCCTCCGACTGAAATTTCTCCCACCAATACTGAAATTGCAACCTCATATGTCGTATAGCTGCCTACATAACATAATTCACTATCAGTCTATTATGTTGACCAGAAGTAAAAATCCTTACCTATTTATGACACCTCAAGACTAGTGTCTTTTTCTCAATACTAGTTTGCATAGAAACTTCTTCAACTCATCCTTGTTTGAGAACATGACCCCAACTTTTACATAACTAGGGCATCCGAGTTGTTTGTATTGTACGTCTTATTGTGTATGAGTACATTTTCTCAAAGGATGAAGCAATCGTTATACATGACGTTGGAAAACCCTCTGCACATTATAGTTATGGTCAAACTTTCTCCAATATCAAGTGCAAATGCAACTAAATCTATAAGTTGACTAATAGTTGTACCGTATACTATTTCAATCGTCACCGTCTCCATTAAAAATAACTGGATGGGTGTGACCTCCATTATTGCAGAACCAAAATCCTTTCAATGTGAAATTTAGAGAGAATTGCAAATGTGTGGATCAGAGAGATTATAGAATTAAGATCTTCAACCATGAACGTGAGTGTAGAGATAGTCGACTGTTGAAGGAAAGATCGTACAATTTGGATCTTCAACCGGCGAGGTGGAATGTGGTTAGGCGACATAACTTTTTTTTCCTACAAATTCATCTTTCTATCATTCAATATTATTTATATAGAGATTTTTTTCAAATTTTAATTTGAATTAACAATAAAATATGAGATATAGTGGTTATTTAATATAAAATCTGATTTTTTTTATAAAAATTTTTTTTTAATCCCATTAGAAAAGAATAAGATATTCAAAATAAAATAATTAGATATTGAAGGTGGTTATGGAAGAAGAAATATTAGGTTATTTCAAGAAATTTTTCAAATTTTAATTTTAATTTTTTCAAATATTTAAAAAGATCTCCTCAAATGTAGGCTCGTGTGGAGGATTTGTTTTTAAACAATATTGATTATTAATTAGGTAAATAGGATATGGAGGGGTATTGTGGGAACTAAAAATCTCTCTTTCTTTCAAGTAGACATGAATTTAAATGCAAAAAATGAGTAGACATTTGATAGTTTATTTTTCAAAAAGTAGACAACTCTTACCATTTTCCAAAAGAGAAAAAGAATTATGGTGAATATAGAGATTTGGGCCAGGCCAAAAAATTGGCCTCTTTTTGCTCTAAAAAAATCCAATCTTTGGTCTATAGTTCAGATGGGCCTTAAGGAATGTTAGCAAAAGATTGTCGAGAGCAAATTCTAGTAATGGGCTGACTACTGATGGGCCAACCATTGACGGGTCGAGTAAAAATAAGCAACAAGATATTTCTCAATCTCCAATTAGAGGCCTGGTTTTAAATGAACAAAGCGGTAGAGCCCTTGAGATTGATAGACTTGAGGCATCGAGTGCTCAACTGCAGACACCTCCTACAGAAAAAGCCATTGAAGAGGGGAACGATCGGAAGAGGAACTACATCAAGAATCCATCCATGGCACTCTCTCCAGGTACGTAGCAATATTCTCCTCCTTCATTTGGCACTATACAGACTATTTTCGAGGAACATGAACTAGTGGTGGACTTGGGAGATCTCAATCCAATTGATTGGAATCACAACTCTAAGATCCAGTCCTGATCAATCTGGTCACTCTACACTCGATAGTCAGCCTGATTATCGTGAATTGTCAGAGGAAATTATTGAGAACATCTTAAGCAATTTACACAACACATGAGGAATTGGGGTCGACGATACTCGACAGGGAGACAGATCAGATTTCAGAAATCAGTTAGAATACTAACTTACTAATAATAGTTATGTTGTTATGTCCATTGAAGATTTGATTTAGAGATCTAGCCAAAATTTAAAACAATTTGATTCTCTTAATACGGCTCGTGAAAGTTCTTACTTGGAACACCAGAGGTCTTCGCTTTGCCTCTAAAAGAGAGGTTATAAAGTCTATCAACCCTGATATTATCATTTTGACCGAAACAAAGTTGAAGGAACAACCTAATCTTGCTGTTATTAAATCAATTTGGAGTTCTGTTAGTGTGGGGTGGTCTTCTCTGGAAGGATCTTCGCGTCCGGGCGATGTTCAGCATTGTGGGATAGGCTTTCGACCACCGCTTGTGAGGTTATTTTAAGCATACATACTTTATCTATTCGTTTTGCTTTAAACGATGGTTTCAATTGGTGACTTATAGGTATTTATGGTCCAACTGAAAGAAGGCAGAGACAATTTTTTTGGAGAGCTCTTTGACCTGTGCTGTCTTTATTCTCCTACATGGCTAATTGGAGGGGATTTTAATGTTTATCGTTGGATGTCTTTCACCACATCAGCTAGGACTTCCCAAACCAATATGAGGCAATTCAATAATTTTATAAACAAAGCTGGTTTGATTGACCCTCCTAGCATTAATGGCCTGCACGCTTGGTCCAACCTCCGTGCTTCACCTACTCTATCCAAGTTAGATAGGTTTCTATACATAGAGGGATGGCTTGAAAAATTCCATATGCATCATTTTTCGAGGAAGTCTAGAGTTACATCCGATCATTATCCAATTTTGCTCGAATCTCAAAATCTTAAATGGGGTCCCAGCCCTTTTAGTTTTGAAAATGCGTGGTTGTGCAACAAAAATTTCGAAGAGGCTTTCGAAAAATGGTGGTTGGAAATTGATCAAGAAGGCTACATCGGGTGTGCCATTATTAAGAAAATTGAAAGCGATGGCTGCCAAATGCAAACAATGGAACAAGGTTCATTTTCAGCCAAATTTGGCTGCCAGAAATCTATTGCGGAGGAGACTGATGCTATTGATAGAAAAGAAGAATCTGGTACTATTGATCAACATGAGGTGGAAAAACGTATTTCCCTAAAAGCTGATCTTTATGCTATATCCATTAACGATGCGAGAAAGTGGAAACAAAGAAGTAATCAAATGTGGCTATTTGAGGGAGATGAAAATTTCAACTTTTTACATAAATCCTGCAATGCTCGAAGAAGATACAACTTCATATCTGAGATTACTGATATAGGAATGGAGGCAGCTGCATTATAGACAAATATATTGAATCCGAATTCATATCTTTCTTTGAAGATATATATAAAGGAGGTAGTGGTGACAATTGGATAGTTACAAACCTTGAATGGCAACCTATATCTTGTGAGCAAGCAAATCAACTTACTCTTCCTTTTTCTGAAGATGAGGTTTAAAGATGCATTAAGTCGTTTGAAAATAACAAACTCCTGGGTCCGAATGGTTTCACTATAGAGCTTTTTAAGAAGTTTTTGAACAGTTTCAAGTCTTGCATTATGCTATTGTTCCACGATTTTTTCCAAACAGGCATAGTAAATCGTGCAGTTATTGAAACCTATGTTGCTTTGATTCCTAAGGTTGTAAAGCCCACAAAAGACTCCGAATTTAGACCCATTAGCTTAACTACTAGCATCTACAAAATTCTTTCCAAAGTTTTGGCTGAGAGGCTTAAAGTGGTTCTACCACACACTATAGCTCACAACCAATGTGCTTTTGTGCAAAGTAGACAAATCATAGATGTTGTGCTCATTTCCAACGAAATGTTTGATTATTGGAGATGTTCTAAACAAAGGCGATGATTATTAAACTTGACATTGAGAAAGAGTTTGATAAGATCAATTGGAAGTTTATTCTGGCGATGCTCAAGTTAAAGGGGTTCAACACAAAATGGATCAACTGGATTCATTCATCCATTTCTACAGTTAGCCTCTCTATAATTGTTCATGGCAAACCCAGAGGAAAGATAAAATCTCTAAGGGGCATTCGCCAAGGAGATCCCTTGTCTTCTTTTCTCTTTGTCATTGATATGGACTACCTTTCTAGGCTCTTTGACAATGCTCATCAGAAGGGTCTCAATGAGGGTTGTTCTTTCATGGGCTGCAATGTCTCTCATTTATTATTTGCCGATGACATCCTTCTTTTTTTTAAGGCTGGTGATAATAAAATGAAGCACCTTCTTCATGTTATTCATAGTCTTGAAGCATCAACAGGGTTAAAGATAAATGTGAATAAATCTATTTTAGCAGGTATTAACATTAGTGATAGCTTGGCTGATGAATTTGCTAACACATGGGGATGTAAATCTAAAGCTCTACTTATTTCTTACCTTGGCATTCCCCTAGGAGGTAATCCAAAGAAATTTTCATTTTGGGAGTCTACTATTGAAAAGATACATAAACATTTGATGGTTGGCAATATGCTTTTCTTTCAAAAGGTGGGAGACCTACATTGATTCAGTCAGTTCTTGGAAACGTTCCTACATATCTCCTGTTTGACTTCAAAGCCCCCATTTCAGTTTGCAAGAAAATTGAGAGCTTAATGAGAAACTTCTTGTGGAAGGGTATTGATAACAAAAGGGGATAAAATCTGATTAGATGCAATTTGGTTACTCTCCCTAAAGAGGTCGGTGGTTTAGGTATTCAAAATATTTCCATTCATAATCAGGCGTTACTTGGAAGATGGTATTGGCGTTTCTTTATGGAAATAGCCCCCCATGGAAGAAGGTGATAATGGCTAAATACACTTCATAGTTCTCGAGTGATTTTCCATCCATATGTCGGCATAGTAGTGCTCATGCTCCTTGGTTTTACATTAAAACTTTGAAAGTGATAATGGAAAGTAACATTAGATGGAAAATAAACAATGGGCGCAAGGCTTTATTCTGGTATCATGCTTGGGATGGTTAAGAGCCTCTATTCTTGTCACAAAGCAGGTCGTTGCCTGCAAATCTCTATCGATTTTTTACGTATGGAATTTTAAGCCTACTTGTCCTCTGATGGACCGTGAACTTGATTGTTGGAATGAAGATATGGCAAACAGGCAGCCGCCTTCATCTACCACAATGGAAGATTATATCCTATGAATCCCCGCCAATAACAAAAGTTTCTCTGTTAGTTCACTAAAGCTCATCTACCACAATGGAGGATTAATCCAAGATTCCCATGAGATAAGCATCTGGATTACCACATTCTTTTTGCCATGCAGTAATGGATGCAAACATCCTGAGATGTCCGACTTATTAAGATACCCATTTAATAGTCATTCGGATGCTCAATGAGTTTTTAGGATGTTCATCTAGACGACATTCTTGAATGACACTTTTGTCATTACTATTTTTTTAAAATAAATTTTTTAATAATTTTCTCTATATTTTGTGTGTAGTTTGTACCTTCAAATTTATATATATATATATATATATATATATATATATATAATAATAATGCATTAACAATTAAACAGACATCCTTTTCAAAAAAACAAAAAAACAACTAAACATACATAATTAATTATATTATGAAAATTTTCACTTGTTGACTAATAAATGAATTTTAGTTTTGGTAAATTTATTTTAAAATATAATATTCAAATTAATATAAGAAATATGATATATAGATTTTAATTATATAAATTAAGTTGTGAGGGCAGTTAAGACATTTACATGAACAAAACTCATAAAATCAATGTAGTTTTCTAAATACCCATAAAACTATTATTACAAAATAAAGATGGTGATCTAAGAATGTCGGTAGTGTGAAATTTTAGACATATGAGATTCCAAGCATAAAGATTCTAGTTATTTTGATTATGATTATCACAAAGTAAATTGCCCCTAAGTTCTTTAAAGTTATGAATTTCTAATTAAAAATTGTTTAACTAACTGTACAATCAAGCAAAAAATATTGAAGCTGAACATTCGATGACTTCCTACATATTGAAACAAAGGTAAAAACGAAAAACATAGAATAAATAACAATTCGAAGTGAAATATATTAAAAAACTTGACTCTCGGTAGAGTAAAATCATCTAAAGAAGATATCAATATATATCGGTTTGAATATAATGGTCTTTGATACACTATTAGATTATCATGAAATTTTAAGTTAAAATGAATGGACAATGTAATAACCCATCAATTATATAAATACTAGGTATCATCAAAGTTATTATCATATTTTCAATGTAGAATTCTCAACACAATTCATGTGGTTAAACAATTAATATTGACATAGAACCAATTCATAGATCAGGAATACAAAAGTAAAAATTGTCTTTCATGAACGAAATTAAATGTCTTAACAATTTCATCCGAACTTAAGGGTAAGGAATAAAAAGTTAAAAAAAAAATGGTACTTTTGAAACTTTTTTTAAAGTTATGGGCAGTTTCGAAAGTTTGAGAGTTTATGAGCATATTTTTTACCGAACGTCCATAGTACTAGGTCATTTTCTATAATTATCTTTTTTTTTTATAGTCAAATAGTTTGTCTACAGAATGGACAACTTCAATTTGGTGATCATAAATAATTATTATGCTTATTAAAAATATGTTCTGTAATGTTTAATCGAAATGAGCTCAAAATAGCAGTTAAGGTAATACTTCATTCGCTTGAGGTTGGAGATTCAATTCTTTCTTATGAAAAAGATATCTCGTAGCAGATACAATGAAAGAAAATAATATATATGCAAATACATTACATCTATTGAAATCAAATAAAGACTTCGAACTAAACACTTCAGAACAATGTATAATAAGTGAAAAAGAAAAAAAAAATGGAAGCTTTCATACACAATAATCAATACGATACTATTTATATTTTCCAAAGAGTCACTTTGAACATCCTATCATTTCATTCTACCCTCAAATATATCACTTAATTGCTCCAAAAAGATTTAACTTCCATAATGCAAGCCATGCACTTAGATTCATAGATATGGACCTCTAAAACGATCTTGGTGGTTTGATTCTCCTCTCCACATTTAAAAGCCATAAATGACAAGGCAAGACTTTATATATTTCTGTTTGGTTAAAATATTCAACAATTTCCCCTATCTCAATTTATTGTTCACTAAAAAAAATCATTAGTTTTTAATAGAAAAATCATCTGAAAAGCATTTTTAATCTCGTATATATCATCATGTAGAGAAAAGTTCAGGTTATGTCATGATTTATTTTACATGACATAACCTGAACTTTTTTAATCTCCTATGTATCATGTAGGCTATATTTCATTTTTTTTTTAATTTTAGGTTAAAAAAAAATAAAATGTGATCCTCTTATTTAAACATGAAAAAATAGGTTATGTCAATGCCTAACATAAATTCCTTTCTGCAAAGCGTTTAGAACAGAAAATTAAAAAAGTACAATAAGGTTGGGAGTTAAGTCCTCAAGATGATACATAGCCCAGCCCAACCCGTATAAATATAAAACAATATAATAAAAGGTGATATTTTAAATTTAACCAACAATAAGACGTGAATAAAAGAAACATGTATGCAAAATAGAGAAATTGAAATCAAGCCAACTTTATTACAATGAATAATAAAAAGTCTCCGCAAATGCGAGATCTTGCTATTGGAATCCGTTAATTATTATTATTTTTTCCAGTTTTTTTTTCCTAACAAATAACATTATTAGACCTTATCTTTTTCTTCCCCCACACCCCATTTGTATTGTTATTTCTTCTTTTATTTAATATCTCAGTGTCTATATGATTATCACTATACAATGAACTCAGAAACTTGGTATTTTAAAAATAATTCTCTCTTACCTTTCCACATCCAAAGTTTTGCAGGTACGGCTCAGATAAAACAATTAGTTTGTCCACTCTTTTACAAACAAAAATGGCCCCTTTTTCCCTTGGCATTGCATGATCTTGTTCATCTCATTCAACGACATTTGTACTGTGTTTTTTTAATGCATGAAACAGATAGTCAAAGTAAAGAGTCACCATTTAATGGCCAGCTTTTGTGCTTTGGAATATTCGCATTCGTAAAGATGATAGAGAATTTACGATCGGCAGAGATATGGGAATGCTCTACTTAGCTTCTTTCATGATATTGAAGTTGAATTCAAAAGGCATCTTAGAGCTACAAAATTTGTTGTACAAGGATTCAAATGACAAAAAGCTAATTTCTCATTCACTTTTTTTTTAGGATTCAACCATATTTTGAGAGGGAGATTTGAATCTATAACCTCACGATTACTAGGTTACATAAGATGCCATTAGAGCTATGTCTGGTCTAATTACCGAGGCAAAATCAAGGTGAATAGAGACATTTGTCAATGTGTGATCCTTCGTCTAAATCCTTTGATATGAATTCAACCACCAACTTATTGTATTCACATGAAGGAGTAATTACAAGAATCAAGAAAAGAAGATTCCATGAAGATTATAAAAATTACATGGCAGAATTTTAAATAAAGAAATTTCCAAATTTCTTATTTTGGAACTTTTTGATTTCAATGCTTGCCAACCATGCTCATAATTGCAAGGGACCTTCTAGAAGAGTTGGTTGAGTCTATTTAAAGCATATCTACCCTTTTGTCTAGCATTTAAGCCATGCAAGTGACTTTTGGCTTCTTATGTCTTATTTTCTAGAAAATGCATTTAATAGCTTTTTGAGTCTTTTTCGTATTCCAAGGCATGCACGAATTTTTAGCCTTTAAATGACTTCTAATACATCATCAAAGGGGCAGCCCAGCGGTTGAGACTAAGGATTTCAAGGCATGCTTCCTTGAGAGATCACTGGTTCGAGGCCGTTGGAAAACGCTTAAACTAGAATACCCTTCGAAGTATCCCGGTGCCATAGTCTAGTGACGGACCAGTGGTGCCCCAGGTATAGGGGAGCAAAGCTCCGATTTCCCGGTTTTCAAAAAAAAAAAAACTTGTGTTTTCTTAGACCCCATTTGGCGTTGTCTTTTTTTCAAATCTTGCTTTAGGTTTGAAGTTAAAATCAATTCATTGGATTAGTCTTGATCAAAATAATTCTGGAGTGAGTTGTCTTAGGATCTAAGAGTGACCATTTTAGATTTTGAGTGTGATCTAAGTTAGCTATCATTGTGAGTTTTTACAAGGATCCTAGAAGGACCTCTAGCTTTGTAAAATGCAAGCAACGTTTGGCGCTTACCATTTGGTGTCAGAGTATTTGGTCGACATTCTTTGGTCGACACTAGAATGTTTTTCAACATGGGACATAATGAAGAAAAAGCAACACATGTACCGTTCTTGAAGCTCTTAAAGATATGTTGGAAATTATGAGAGAAGATATGGAAGAAACAAGAGCACATCGCAAAAAGATGTCTTCAAGGTACACTAATCATAAACCAATTTCAAATATTCAATTTTCTATGGAAAATAATAGTTTATGTGATGAAGTTCAGCCTATGGTTGTGGAAAGTTGTATCAATGAAAATGAAATGCTCAGTGGTTTAGTTTCAACAAATGCATGTGAGTTTAGCAAAAAATTAGATTGTATGGACTTGTTTGCTTGCAATCCCTCTACTATTGTAACACCTACTATTAATGATGTACATGTTGATGTGTGTGAGTTAGGGAAAAAGGCACAAAAGGCCAAAACAAAAGCAAATGATTTTAGAGAAAAAGAATCTTGTGAGAAAATGAGTGTGAGAGATAAGCATGAGATTAGTTTATGGTCAATAGAGAAAAATGAGAGAAAAGGCAATGTTGTGCGCTTGTGTGAAAGAGCCAATGAGGCTAAATCTATTTTGTTTTCAAAGAAAAATATTTGTAGACTTTTATATAAAGGAACTTGCTATCTAACGAGCGAGCTCAAACCATGTTTGTCTAGTGTTTCTTTTGAGTTCTTACAGGAAGCAAGAGATCTTATACAACATCTCGAAGAGAAGATTCTATCTAAAGTAAAGAATGACCACAAACACAATACCAACTTGTTTATTATGATGAAATACTCCAAATTTTTTTCTAAGTTCATCCATGGCAGCAAGCACAAAATGTTCAATACAAGACATAAAGATTTTGATTTGAGGACAAATCCTTTTAAAGAAAGGGGGGATGATATGAATTCAACCACCAACTTATTGTATTCACATGAAGGAGCAATTACAAGAAGCAAGAAAAGAAGATTCCATGAAGATTATAAAAATTACATGGTAGAATTTTAAATAAAGAAATTTCCAAATTTCTTATTCTGGAACTTTTTTATTCCAATGCTTGCCAACCATTCTCTTAATTGCAAGAGACCTTCTAGAAGAGTTGGTTGAGTCTATTTAAAGCATATCTACCCTTGTAATGACCCGACCCGAATGGGGTTCTAAATAGGCCATTACCTCAATGCATGCATAGAAATCAACACTAGAATTTGCAATAGGGTTGTTTCGGATTCTAAGTAAAAACCAAAAACCGGCAAGAGTTCATTTAAAAAGTCAATACAAAATTCTTGAAACTGTCCCTGTTTCCCAAGCATTGCTCCAAGACAAATACATTTCCAAACATACTCTGATCAGAGATTTATTTAAAACATACAAACTTTACAACAATGCTAGAATCCGGAAATACATTCAGAAAACACCCTAGGGCTCCGTGCCCAACTACATGCATTCAGAGGACATTTAAATCATAAACATAAATCTCAGAGTTGAACAACGGGTTTCCATGATCACAGCTCCTCCTCCAAACCACCATCCGCCTCGCGCCATGGTTTCCTGAAAGATAAGTAAGGGTGAGTAACGAATTACTCAGTAAGAATCCCCAACCGGGGTACAATACGATATACATGGTCATCTAGCAGAAAGATATGCAAGCTATGAATATAAACACAGATAGAGCACATAGCTTAGCCCACACTTGGGCCTCGGATGCCAACTCAGGGTCTTAGTCCGGAAATCAAACACCACACAACACATCACACAAGTCGCCCTATACGAGAAACAAGTCTCGGCCTCAGCCTGTCTACTGTCGACGAAAGGTACACTGGCTCACAATCCCGAGGAGCTCTCGATCGGTATTTGTAATGAGCGTAAGCATGCACCGCGTGCTGCACTGCGCACTACTATGGGGGGTTGCTAGGAGTGCGAAGGCAAGTTGCCCATATCCGATCCACCACGCCTAACTAAATCTTTGGATCGGTGTCACCGACATAGGGGTGTGAGACACGGACACATAAACTATGTCACTGAACCACCGCACTGGGGCCAAGAAGCGGTCGTGGTAGGCTTACACCAGAAGTCGTCCTTGCCTTAACGGTGGCAATCGGGGCTCACGCCAAACATGCCGAGGACATGCTATTGCCGGGGACGAGGCAATGCCAAGTCATCATCCCGACCGTTGGGGCATTAACAACCGCCTCCCTCACCCAAGATTGCGGGGCCTACCGCTTGGGTTAGCTAATCCTCACGGGTCGAGGGGCGGAATGACTTGCTCGACGTCCCCCGCCATGGATGCAAGGTACTTTATGCATCGGGCCGGATGATGCTATCTACCGCACTTCTAACCCGCCTAGCAAGCAAACAAACAATTCCATAAAATCCAATACGTGCTCAAAGAGAATACAACGAGCCTAGCATGATACTACGAAGCAAGAAGCAGATCACGAGCATGCGAGAAAGGAACAACCTAGCATGGATTAACATGAGAATTAAACGGGAAAGTCATGCTAATCGGGAATTCAGATTAGAGCACTTATCACCAAACATGTCAATAAACACAAACAAGCATACAATCGGCAATCGCATAATATATCGCGAGGTCCACACAACTCGGTAAGAAATCCTTACCGCCGGAAGACCTCTAAACACAAGAAACCTAAGCTGCGATCGAACAGAGCTAGCTAGCTAGCGAGAACCTAACAAAAACAACAATAATTACAATCAAAAGGCCCAAATATAATAAAACAAGCAGGGGCTCGGCTCGGGAGCACTCACGAGCACTACGACACGCGAACGGGCGTTTTTGCTCGGGCTAGGTAGTAGGTGGCGTAGCTGGGGCTGCAGACATTGGCGCGGCAGGCGCAGCACGCTGTATTTGAGGCAGGCTGCACGGCTGTATTGAGGCACGACACACGACAGGCGATGGGGGCGCTGGGCATGGCTGGCGGCGCGGCGCGCGCGCGGACGCGATCACGCGGAGGCAGCGCGGCGCGCGCGCGCGAGCTTCGGCTTCGGCTACTGCGGCGCGCCTCGGCACGGCGAGCTCTGGTGGCGAGGGTGCGCGGGCGTGACGCACGCGCGATCTGGCTGGGCTCGGCAGATCGGGACGCGCGACTCGGACCGAGGCGACTCGGGGGTGGCGGGACGAGCGCGCGGGCCGGGCTAGGCCGGCGAGAGGTCTGGCGCGGTTGGCGTCTGCGCGACGAGGCATGGCGGCGACGGCGGCGGCTCAGTGCGGCGGCTCGGGCGATTTGGCCTACTGGTGGGGTGGTGAGGCTAGGTCGGGAAGAGAGAGAGAGAAAAAATGGATTTGGGGAAAAATAAAAGAAAAAGAAAATAAAAGGAAAATGGGAAATAAAAGGAAAAATGGGATTTTAATTCCATTTTCCATCCATATCCACTTAACACCTCAAAATCCCATTTCCCGGCTTCCTCCTTCGAGACCCGACCGAAGAAAACATTTCCAATCAATAAAACTCACTAAAATCCAACTCCCAAATCAACACTAAGGGCCCGGGCTCGAATCCCAAAGGAAGCACACAACCAACCATCACTTTGCAAAAATCCCAAATCACAATCGAACTTCCAAACGACTAGCCCAAACATCTCGGGACTCATGATCCAACCCAAACAAGCCACGGCAAAGGCGGGGAGCCACCTCGAAGCCCGAAAATCCACAAATCCCGCCGAGGAGCAAAAGACCAAAATGCCCCCAAGGGTCAAAACCGCTCTAACGACCCAACCAACAACCGAAACTTGACCCGAAGGCACCTCGAAAACTGGGATAGAAAACTGGGCTGTTACAACCCTTTTGTCTAGCATTTAAGCCATGCAAGTGACTTTTGGCTTCTTATGTCTTATTTTCTAGAAAATGCATTTAATAGCTTTTTGAGTCTTTTTTGTATTCCAAGGTATGCACGAATATTTTGCCTTTAAAATGGCTTGTAATACATCATTTTGGAGAGATTTACGATTCAAAAACTTGTGTTTTCTTATACCCCATTTGGTGTTGTCTTTTTTTTAAATCTTGCTTTAGGTTTGAAGTTAAAATCAATTCATTGAATTAGTCTTGATCAAACTAATTCTGGAGTAAGTTGTCTTAGGATCTAAGAGTGACCATTTTAGATTCTGAGTGTGATCTAAGATAGATATCTTTGTGAGTTTTTACAAGGATCCTAGAAGGACCTCTAGCTTTGTAAAATTCAAGCAACGTTTGACACTTATCATCCTTTTTTCTCTTTGTCCTGGCTATGGACTATCTCTCCAAATTGTTATATGAAGTGTATAAAAACATTTTATAAATGGAAGTTTCATTATATTAAAAAAACTAAGAAATTTTATGAATAGCAAAACTTTGAAAAAATTTCATGTATAGCTAAAATAGAGACTGATCCTTTTGAAATGACCAAAATGTCAACACTTAAAATCACCCACTTCCCTCAACATTCCAATCACAAATTGATAGTTCAATCTAGTGAACTAATTATTGAAACAATTAAGTGAAATTTATTGAAGACAATAAGTTAAATGATTGAAATTGAAGAGAAGAATGAAGAAACGGTCGAATAAAAGAATGAATAAATGAAAAATGTCCTCAGGTTTAATAAATTTAATAGTTGATATTGAATGAAGGGAATCGTTGACATTGATTTAAGGTAATCAATGATAGAAAGTAAATCACTAAAATGATTCAAAACCATGAAAGTTGAAATTTAACTGTTTTTTACATAAAGGAAAATAAAAGAAAAAAGATGAAGCTAATAAGAAGAAAATGAAGAAATTAGTGAGAAAGAAATGAAGATATTAATGACTTCAATCATTGATACTAATTAAAGGCAATCGTTGACATATATTATAGACAATTGATGATGCTAATGGAAGTCAATTAGTTAAACTGAATGAAAACAAAGTGAAACTAATTGACACTTATCAGTTAAATGATTAAAGACAATGAAAATAACCTCTTTTTCTTCTCCCCTTATCTCTCCTACTCCTGACTGAGGCCATTGACCCGCCAACATCACAATTTTCTTAGTGCTCATCCGCAAGCTTGATGTGTATCATAGCAGTTGGATCTTCTTGGATTAAACTTAGTCATTGATCCTTTTTTGTAAATAGTCAACTGTTAGGTTGATTCGTGTGTACTGCTTCATATCTCTATAAAATTCTACCCTATATCATTTCACAATTAATGAAAATACTTCTTCATCATGAAAAATCTCTTTGAATTAGAGTAGGTGTGATTTCCTTTTTTTCCTGTTCTTCTCCTCTTCCTGTTTGTACATTTCTGTATTTAGTATTCAGAAGTTCGTACATTTCTGTTCGTCTTCCCAACGATCTCTATATCTGGGTACGACTGATTAGTCAAGATTTTCAATGGCTTCGATAGATCCTAAATCTACTTCGTCTTTATACCTGCTGACAAATATTTGTACTCTAGTTCAATTTATCTTGGTGCAACAAACTTTATCCTCTAGAACTACTAGATATCGCCTCTATTAAAGAAGCAAAAAATGTTTAGGTTTCTTTATGGAACTCATTATTCTACAACAACTGAGAAATCAGATGATGGTAAAGAAGACATCATTCGAATGAATGTTTATAATGGTTTAAGAAAGACTAGGCTATAACTACATTGATAAATGTCACCTCCCTCTCACTAATTGTTGGTTGGAAGACTTCACAAGAAGTATGGGAAACTTTAGAAAGACATTTCTCTTCATCATAAAAAACTAAGATAATTGGTTTGAAATCTGATCTTTAAAAGATTACGAAGAAAAAGTGAAAGCATATATAGATATATCAAGAGGATCAAAGATCTACTAAATTGACTTACGGTTATGTCTAGCTTGATTAATAATGAAGGTATTATCATTTATGCTTTGAATTTTCTACCATATGTTTATAATGTCTTCAAAACATCAAGGCAAGTTTGTTCGACCATAATTACTTTTGAAGTATCCCATGTCTTATTAAAGAATGAGAAATTTTCTATTGAAACTTAGGCTAAGAACAATGAAACATCTAATTTGTTTATAACTATAAATAATAGAGTTATTTAAGCCTTATATTTAATGCATTCCTGCATTTCATATAGGAAATACAAACATTTTAGGTAGAATTGTTGTTAGAAATTAAGATATGCATATAAGTTTCGGATGGAGAGTCCATCGAGCCTTAAGATTAAAAATTAGGATTCATTGATACTTTGTTTGTAGAATTATAAATGCTTTGAGCAAATGCATGTCTAGAACCCAAATCTCGATAATGTAATATTTCATGTGCAGGATTTGGGAGTGCTCGTGTCGCATAAAAGGTCAAAAAGTGAGGTTCAATGCTTCAAAGAGATGCAAATTAAAAATAACTTAGGAAATCGCAGAAATATGGGAAGATCTTTTATCTTGCTAGAAAAGATGTTAACAAGGTCTAGAATCTTCCGAAGGTCAATAATGGGAGTCCAA

mRNA sequence

ATGGCCATCAACCTTTTTCATGCAGACAATGCTCTCTTTGCTCTTAGAACAGAAGACTACACCAAATTGCTTTCCAACAACACAGGTTGGGTGACTATTGAATCTATTAATAAAAAATTTGAAAGATGGGATCCTCTCATTCATGCAACTCCCACAGTCTTCCCTAATTATGGGGGTTGGCTTCGTTTTCGTGGAGTCCCTTTACATATGTGGAATCATGACACTTTCAAAATTATTGGGGACATATGCAGTGGTTTACTGAAAGTTGGGAACACAGTTGATAATGGAATGGACCTTACTGAAGTTCGTCTCAAAGTCTGCGAAAATTATAGGGGTTTCATCCCCCTCAATATTGGCATAATAGATGCAGATGGATCAAATTATGTGGTTCATACGATCTCGCCGGCGTCGGGCTGTTGGAGGATTGGTAGGAACCCTAAAGTTCATTTAACTTTCTCGCGTGAAGTGTTCAGATGGGCCTTAAGGAATGTTAGCAAAAGATTGTCGAGAGCAAATTCTAGTAATGGGCTGACTACTGATGGGCCAACCATTGACGGGTCGAGTAAAAATAAGCAACAAGATATTTCTCAATCTCCAATTAGAGGCCTGGTTTTAAATGAACAAAGCGGTAGAGCCCTTGAGATTGATAGACTTGAGGCATCGAGTGCTCAACTGCAGACACCTCCTACAGAAAAAGCCATTGAAGAGGGGAACGATCGGAAGAGGAACTACATCAAGAATCCATCCATGGCACTCTCTCCAGGATTTGGGAGTGCTCGTGTCGCATAAAAGGTCAAAAAGTGAGGTTCAATGCTTCAAAGAGATGCAAATTAAAAATAACTTAGGAAATCGCAGAAATATGGGAAGATCTTTTATCTTGCTAGAAAAGATGTTAACAAGGTCTAGAATCTTCCGAAGGTCAATAATGGGAGTCCAA

Coding sequence (CDS)

ATGGCCATCAACCTTTTTCATGCAGACAATGCTCTCTTTGCTCTTAGAACAGAAGACTACACCAAATTGCTTTCCAACAACACAGGTTGGGTGACTATTGAATCTATTAATAAAAAATTTGAAAGATGGGATCCTCTCATTCATGCAACTCCCACAGTCTTCCCTAATTATGGGGGTTGGCTTCGTTTTCGTGGAGTCCCTTTACATATGTGGAATCATGACACTTTCAAAATTATTGGGGACATATGCAGTGGTTTACTGAAAGTTGGGAACACAGTTGATAATGGAATGGACCTTACTGAAGTTCGTCTCAAAGTCTGCGAAAATTATAGGGGTTTCATCCCCCTCAATATTGGCATAATAGATGCAGATGGATCAAATTATGTGGTTCATACGATCTCGCCGGCGTCGGGCTGTTGGAGGATTGGTAGGAACCCTAAAGTTCATTTAACTTTCTCGCGTGAAGTGTTCAGATGGGCCTTAAGGAATGTTAGCAAAAGATTGTCGAGAGCAAATTCTAGTAATGGGCTGACTACTGATGGGCCAACCATTGACGGGTCGAGTAAAAATAAGCAACAAGATATTTCTCAATCTCCAATTAGAGGCCTGGTTTTAAATGAACAAAGCGGTAGAGCCCTTGAGATTGATAGACTTGAGGCATCGAGTGCTCAACTGCAGACACCTCCTACAGAAAAAGCCATTGAAGAGGGGAACGATCGGAAGAGGAACTACATCAAGAATCCATCCATGGCACTCTCTCCAGGATTTGGGAGTGCTCGTGTCGCATAA

Protein sequence

MAINLFHADNALFALRTEDYTKLLSNNTGWVTIESINKKFERWDPLIHATPTVFPNYGGWLRFRGVPLHMWNHDTFKIIGDICSGLLKVGNTVDNGMDLTEVRLKVCENYRGFIPLNIGIIDADGSNYVVHTISPASGCWRIGRNPKVHLTFSREVFRWALRNVSKRLSRANSSNGLTTDGPTIDGSSKNKQQDISQSPIRGLVLNEQSGRALEIDRLEASSAQLQTPPTEKAIEEGNDRKRNYIKNPSMALSPGFGSARVA

Homology

[Close]

BLAST of Sed0012823 vs. NCBI nr
Match: KAA0057199.1 (hypothetical protein E6C27_scaffold280G00320 [Cucumis melo var. makuwa] >TYK18763.1 hypothetical protein E5676_scaffold257G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 159.5 bits (402), Expect = 4.1e-35
Identity = 71/150 (47.33%), Postives = 93/150 (62.00%), Query Frame = 0


Query: 6   FHADNALFALRTEDYTKLLSNNTGWVTIESINKKFERWDPLIHATPTVFPNYGGWLRFRG 65
           FHAD AL  L+  +   LL  N GW T++    KFE+WD  +HAT  + P+YGGW RFRG
Sbjct: 101 FHADKALLILKDVEQVNLLCRNKGWSTMDRFYVKFEKWDQALHATTKLIPSYGGWKRFRG 160

Query: 66  VPLHMWNHDTFKIIGDICSGLLKVGNTVDNGMDLTEVRLKVCENYRGFIPLNIGIIDADG 125
           +PLH W   TFK I + C G L V     + +D+ E  +KV  NY GFI   I IID +G
Sbjct: 161 IPLHAWKQSTFKQIREACGGSLVVAKDTRDKIDIIEANIKVHFNYTGFILATIIIIDDEG 220

Query: 126 SNYVVHTISPASGCWRIGRNPKVHLTFSRE 156
           + ++VH+I  + G W I RNP++H TFSRE
Sbjct: 221 NRFLVHSIFHSEGRWLIERNPRIHGTFSRE 250

[Close]

BLAST of Sed0012823 vs. NCBI nr
Match: TYJ99315.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-34
Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 0


Query: 4   NLFHADNALFALRTEDYTKLLSNNTGWVTIESINKKFERWDPLIHATPTVFPNYGGWLRF 63
           N FHA+ AL    +     LL  N GW T+   + +FE+W P+ HATP + P+YGGW  F
Sbjct: 289 NAFHAEKALVHFSSNIPANLLCQNKGWSTVGKYSVRFEKWSPVYHATPKLIPSYGGWTTF 348

Query: 64  RGVPLHMWNHDTFKIIGDICSGLLKVGNTVDNGMDLTEVRLKVCENYRGFIPLNIGIIDA 123
           RG+PLH+WN  TF+ IG  C GL+KV     +  +L E R+KV  NY GF+P N+ I D 
Sbjct: 349 RGIPLHLWNMMTFQQIGKACEGLIKVAEETRSAKNLIEARIKVRYNYSGFLPANVRIFDN 408

Query: 124 DGSNYVVHTISPASGCWRIGRNPKVHLTFSRE 156
           +G+ + V  ++   G W I RN ++H TF R+
Sbjct: 409 EGNKFFVQVVTHPEGKWLIERNVRLHGTFKRQ 440

[Close]

BLAST of Sed0012823 vs. NCBI nr
Match: KAA0050816.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK08529.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-34
Identity = 66/152 (43.42%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 4   NLFHADNALFALRTEDYTKLLSNNTGWVTIESINKKFERWDPLIHATPTVFPNYGGWLRF 63
           N FHA+ AL    +     LL  N GW T+     +FE+WDP  HA+P + P+YGGW  F
Sbjct: 149 NAFHAEKALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWDPASHASPKLIPSYGGWTTF 208

Query: 64  RGVPLHMWNHDTFKIIGDICSGLLKVGNTVDNGMDLTEVRLKVCENYRGFIPLNIGIIDA 123
           RG+PLH+WN  TF+ IG  C GLLKV        +L E +LK+  NY GF+P  + I D 
Sbjct: 209 RGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQ 268

Query: 124 DGSNYVVHTISPASGCWRIGRNPKVHLTFSRE 156
           +G+ +VV  I+ + G W + RN ++H TF R+
Sbjct: 269 EGNKFVVQAITHSEGKWLMERNVRLHGTFKRQ 300

[Close]

BLAST of Sed0012823 vs. NCBI nr
Match: KAA0044557.1 (hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-33
Identity = 86/245 (35.10%), Postives = 123/245 (50.20%), Query Frame = 0


Query: 6   FHADNALFALRTEDYTKLLSNNTGWVTIESINKKFERWDPLIHATPTVFPNYGGWLRFRG 65
           FHAD AL  ++ +D  KLL  N GW T+     KFE+W    HA   V P+YGGW RFRG
Sbjct: 229 FHADKALLFIKDKDLAKLLCKNNGWTTVGPFYVKFEKWSKSAHADTKVIPSYGGWTRFRG 288

Query: 66  VPLHMWNHDTFKIIGDICSGLLKVGNTVDNGMDLTEVRLKVCENYRGFIPLNIGIIDADG 125
           +PLH+WN +TF  IG+ C G +       N ++LTE  +KV ENY GF+P  I I D +G
Sbjct: 289 IPLHIWNLNTFIQIGEACGGFIDAAPESVNKIELTEALIKVKENYTGFLPAFIQIHDEEG 348

Query: 126 SNYVVHTISPASGCWRIGRNPKVHLTFSRE---------------VFRWALRNVSKRLSR 185
             +++ T++   G W   RNP +H +F++                 FR  L  +SK    
Sbjct: 349 HVFIIQTVTHPEGRWLRERNPSIHGSFTKTAAENFNEFNPYAEQFTFRRNLAVISKLDLP 408

Query: 186 ANSSNGLTTDGPTIDGSSKNKQQDISQSPIRGL-VLNEQSGRALEIDRLEASSAQLQTPP 235
            +S NG           SK    D  + P + +   N+  G  +   ++EA S +  TP 
Sbjct: 409 ESSKNG-----------SKQMNADRKKGPTKTIKKFNKTLGSPMSYAKMEAKSKR-PTPS 461

[Close]

BLAST of Sed0012823 vs. NCBI nr
Match: TYK23598.1 (hypothetical protein E5676_scaffold500G001100 [Cucumis melo var. makuwa])

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-33
Identity = 64/152 (42.11%), Postives = 90/152 (59.21%), Query Frame = 0


Query: 4   NLFHADNALFALRTEDYTKLLSNNTGWVTIESINKKFERWDPLIHATPTVFPNYGGWLRF 63
           N FHA+ AL    +     LL  N GW T+   + +FE+W    HATP + P+YGGW  F
Sbjct: 233 NAFHAEKALVHFSSNIPANLLCQNKGWTTVGKYSVRFEKWSSAYHATPKLIPSYGGWTTF 292

Query: 64  RGVPLHMWNHDTFKIIGDICSGLLKVGNTVDNGMDLTEVRLKVCENYRGFIPLNIGIIDA 123
           RG+PLH+WN  TF+ IG  C GL+KV     +  +L E R+KV  NY GF+P N+ I D 
Sbjct: 293 RGIPLHLWNMTTFQQIGKACGGLIKVAEETKSAKNLIEARIKVRYNYSGFLPANVRIFDN 352

Query: 124 DGSNYVVHTISPASGCWRIGRNPKVHLTFSRE 156
           +G+ + +  ++   G W I RN ++H TF R+
Sbjct: 353 EGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQ 384

[Close]

BLAST of Sed0012823 vs. ExPASy TrEMBL
Match: A0A5D3D5E9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00670 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35
Identity = 71/150 (47.33%), Postives = 93/150 (62.00%), Query Frame = 0


Query: 6   FHADNALFALRTEDYTKLLSNNTGWVTIESINKKFERWDPLIHATPTVFPNYGGWLRFRG 65
           FHAD AL  L+  +   LL  N GW T++    KFE+WD  +HAT  + P+YGGW RFRG
Sbjct: 101 FHADKALLILKDVEQVNLLCRNKGWSTMDRFYVKFEKWDQALHATTKLIPSYGGWKRFRG 160

Query: 66  VPLHMWNHDTFKIIGDICSGLLKVGNTVDNGMDLTEVRLKVCENYRGFIPLNIGIIDADG 125
           +PLH W   TFK I + C G L V     + +D+ E  +KV  NY GFI   I IID +G
Sbjct: 161 IPLHAWKQSTFKQIREACGGSLVVAKDTRDKIDIIEANIKVHFNYTGFILATIIIIDDEG 220

Query: 126 SNYVVHTISPASGCWRIGRNPKVHLTFSRE 156
           + ++VH+I  + G W I RNP++H TFSRE
Sbjct: 221 NRFLVHSIFHSEGRWLIERNPRIHGTFSRE 250

[Close]

BLAST of Sed0012823 vs. ExPASy TrEMBL
Match: A0A5D3BLV7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005290 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.7e-34
Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 0


Query: 4   NLFHADNALFALRTEDYTKLLSNNTGWVTIESINKKFERWDPLIHATPTVFPNYGGWLRF 63
           N FHA+ AL    +     LL  N GW T+   + +FE+W P+ HATP + P+YGGW  F
Sbjct: 289 NAFHAEKALVHFSSNIPANLLCQNKGWSTVGKYSVRFEKWSPVYHATPKLIPSYGGWTTF 348

Query: 64  RGVPLHMWNHDTFKIIGDICSGLLKVGNTVDNGMDLTEVRLKVCENYRGFIPLNIGIIDA 123
           RG+PLH+WN  TF+ IG  C GL+KV     +  +L E R+KV  NY GF+P N+ I D 
Sbjct: 349 RGIPLHLWNMMTFQQIGKACEGLIKVAEETRSAKNLIEARIKVRYNYSGFLPANVRIFDN 408

Query: 124 DGSNYVVHTISPASGCWRIGRNPKVHLTFSRE 156
           +G+ + V  ++   G W I RN ++H TF R+
Sbjct: 409 EGNKFFVQVVTHPEGKWLIERNVRLHGTFKRQ 440

[Close]

BLAST of Sed0012823 vs. ExPASy TrEMBL
Match: A0A5A7U9E5 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00670 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.2e-34
Identity = 66/152 (43.42%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 4   NLFHADNALFALRTEDYTKLLSNNTGWVTIESINKKFERWDPLIHATPTVFPNYGGWLRF 63
           N FHA+ AL    +     LL  N GW T+     +FE+WDP  HA+P + P+YGGW  F
Sbjct: 149 NAFHAEKALVHFNSNVPANLLCQNKGWTTVGKYMVRFEKWDPASHASPKLIPSYGGWTTF 208

Query: 64  RGVPLHMWNHDTFKIIGDICSGLLKVGNTVDNGMDLTEVRLKVCENYRGFIPLNIGIIDA 123
           RG+PLH+WN  TF+ IG  C GLLKV        +L E +LK+  NY GF+P  + I D 
Sbjct: 209 RGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQ 268

Query: 124 DGSNYVVHTISPASGCWRIGRNPKVHLTFSRE 156
           +G+ +VV  I+ + G W + RN ++H TF R+
Sbjct: 269 EGNKFVVQAITHSEGKWLMERNVRLHGTFKRQ 300

[Close]

BLAST of Sed0012823 vs. ExPASy TrEMBL
Match: A0A5A7TRS9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003060 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 8.3e-34
Identity = 86/245 (35.10%), Postives = 123/245 (50.20%), Query Frame = 0


Query: 6   FHADNALFALRTEDYTKLLSNNTGWVTIESINKKFERWDPLIHATPTVFPNYGGWLRFRG 65
           FHAD AL  ++ +D  KLL  N GW T+     KFE+W    HA   V P+YGGW RFRG
Sbjct: 229 FHADKALLFIKDKDLAKLLCKNNGWTTVGPFYVKFEKWSKSAHADTKVIPSYGGWTRFRG 288

Query: 66  VPLHMWNHDTFKIIGDICSGLLKVGNTVDNGMDLTEVRLKVCENYRGFIPLNIGIIDADG 125
           +PLH+WN +TF  IG+ C G +       N ++LTE  +KV ENY GF+P  I I D +G
Sbjct: 289 IPLHIWNLNTFIQIGEACGGFIDAAPESVNKIELTEALIKVKENYTGFLPAFIQIHDEEG 348

Query: 126 SNYVVHTISPASGCWRIGRNPKVHLTFSRE---------------VFRWALRNVSKRLSR 185
             +++ T++   G W   RNP +H +F++                 FR  L  +SK    
Sbjct: 349 HVFIIQTVTHPEGRWLRERNPSIHGSFTKTAAENFNEFNPYAEQFTFRRNLAVISKLDLP 408

Query: 186 ANSSNGLTTDGPTIDGSSKNKQQDISQSPIRGL-VLNEQSGRALEIDRLEASSAQLQTPP 235
            +S NG           SK    D  + P + +   N+  G  +   ++EA S +  TP 
Sbjct: 409 ESSKNG-----------SKQMNADRKKGPTKTIKKFNKTLGSPMSYAKMEAKSKR-PTPS 461

[Close]

BLAST of Sed0012823 vs. ExPASy TrEMBL
Match: A0A5D3DJE1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001100 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-33
Identity = 64/152 (42.11%), Postives = 90/152 (59.21%), Query Frame = 0


Query: 4   NLFHADNALFALRTEDYTKLLSNNTGWVTIESINKKFERWDPLIHATPTVFPNYGGWLRF 63
           N FHA+ AL    +     LL  N GW T+   + +FE+W    HATP + P+YGGW  F
Sbjct: 233 NAFHAEKALVHFSSNIPANLLCQNKGWTTVGKYSVRFEKWSSAYHATPKLIPSYGGWTTF 292

Query: 64  RGVPLHMWNHDTFKIIGDICSGLLKVGNTVDNGMDLTEVRLKVCENYRGFIPLNIGIIDA 123
           RG+PLH+WN  TF+ IG  C GL+KV     +  +L E R+KV  NY GF+P N+ I D 
Sbjct: 293 RGIPLHLWNMTTFQQIGKACGGLIKVAEETKSAKNLIEARIKVRYNYSGFLPANVRIFDN 352

Query: 124 DGSNYVVHTISPASGCWRIGRNPKVHLTFSRE 156
           +G+ + +  ++   G W I RN ++H TF R+
Sbjct: 353 EGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQ 384

The following BLAST results are available for this feature:

BLAST of Sed0012823 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057199.1	4.1e-35	47.33	hypothetical protein E6C27_scaffold280G00320 [Cucumis melo var. makuwa] >TYK1876...	[more]
TYJ99315.1	3.4e-34	43.42	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0050816.1	4.5e-34	43.42	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK085...	[more]
KAA0044557.1	1.7e-33	35.10	hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa]	[more]
TYK23598.1	2.2e-33	42.11	hypothetical protein E5676_scaffold500G001100 [Cucumis melo var. makuwa]	[more]

BLAST of Sed0012823 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0012823 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D5E9	2.0e-35	47.33	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BLV7	1.7e-34	43.42	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7U9E5	2.2e-34	43.42	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TRS9	8.3e-34	35.10	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DJE1	1.1e-33	42.11	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Sed0012823 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 18..106 e-value: 3.7E-8 score: 33.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012823.1	Sed0012823.1	mRNA
Sed0012823.2	Sed0012823.2	mRNA