Sed0012815 (gene) Chayote v1

Overview


Name	Sed0012815
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribosome biogenesis protein BRX1-like
Location	LG01: 3258931 .. 3266683 (-)
RNA-Seq Expression	Sed0012815
Synteny	Sed0012815

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTATCTCCAAAATCCAATCACCTCTTTTCTGCTTATATTCTTATGGTTGTTGTTGTTGGTTTTATTTATTTAAAATAATAATATTTTTACTATTTTATTATGAATGAGGGTTTAGGGCTTAGGGAAACAGTCTCCCCCATGGTCTCTGTATAGCTGAAGTAACCTTCTTTCCCAGTCACCGTCTCGCTTTCTTCTTCCCTGTTCTGATTCGCCGGCCTTCTCTCTTTCTCATTCAATCAATCCAGATTTCTTCAACCTCCGTTTGTTGATTTAGGTTTAGATTTTTTTTTCAATGGCAAAGAAGAGGAAGCACAGCGAGGCTTCGCCGATTGTCTCGGTTAAGAAGGATGACAGCGCCGCTGAGAGACCCAAGCGGACGCTCATGGGTTGGAAGGACAAGGAGGCCGCGAAAGAGACCGAATCGGGTTCCGACCATTCCGTTTTCCGGAACAAAGAGAAGGTTCTCGTCACTTGCTCCCGCCGAATCGATTTTAGGTACGGAATATAGGTGTACGACTGTTTGTGTTAATGAATTCGTATATCTTGAGCTTTGCACTCTTGAATCAGTTCAATAAGGGTAGTTTTCATGTTGTTTTTAGATCAAAACGGAATTTTCTTACTTCATTTTCTGTTATGGTACAAGGTGCCGTGATGTTCTAAACTTATCTGTGAATGTAACCTTTAATTTGACTATTAGCTTAATAATATGATTGGTGAAGGCTATCTGTTTGGTCCGTGACAATAGTCTGCAAACCTGACCCGAATGGTGACAGATATAAAAAAAAAAGTTTGACTTGGTTGAAAAAGGTAAGAAACCCATAACACTGATTGGATAGTATATTTGGAAAAAGTCGGATTATGTTCAATCAGTGTTTCAAATGGCGTGCCTCGGTGCAAATTGCCTTCTAGCCCCTTGCTTGTCTCGGGCGAGGCGCATGTAATAAGGCGCGCGCCTTTTGGCCCCTTATGTGAAGCCCCAGGCGCGCGCCTTGTGGGTTTTTTAAAATTTCTTTCTATTTTTTGTATTCTAGGTCCCTACAAGCTTTTAGCTTCGGGGGTGTTGCCCCCAAGTTCCCATCGGTGGTCACGTTGCACCCCTGAACCCCCAGAACCGGGCGCTTTGCCCTTGGACTCCGACTCGCTGACCGGGCAGCGAGACCTCTGTATTAGGTCATTCGAAGCGCATGAAGATTGATAGTTGAATATTGTGTATGTTTTATATATTATTCTTGGTTAAAACTTAAAACTTCATTTATGTCCATGAGAAGTATTTTTATTGTGTATACACACACATATTTAAAGTTTTTGTGTTTTTTTTTATATAGTGCGCCTTAAGTAAAAAAGTCCTCACCTTTTGGTGTGCCTTGCGTATCAGGCTCCAGAGGGCCATTGCGCTTTAGTGTGCCTTGCGTTTTTTAAAACATTGCGTTCATAATTTTCTAGTTTCTTATTTCTCAAACAATAGATATCTGATTAAGGATATGACTTGCGAGAAGGAAAAATGAAATCTGGACAACTGTTACAAGAAAGATGGTATTAATGTAGCTAATGAACCATCGTGGAGTGCCTTCGTAGTTAACACAAGAGAGCCTTGGGGAACTAAGAGGTTAAGTGTTCAATCCATGATGACCACCAACTTATGAATTAATTTCGTACGGATTTTCTTAAGTTCAAATGTTGTATGGTTAGAAGGTAATGTCCCGTGATGATAGTCGACATGTGCCTAACAAGTTGGCTCGGACATTCATGGATAAAAAAATAAATGTACAAGCTAATGAATATAGAGAATTGAATATAAATGTAGAAGCTAACGAGTATAGAGAATTGATGGGATTCTTTAGGCCCCGTTTGATAACCATTTGGTTATTTGTTTTTGAAATTTAAGTCTATTCTTACTCAAACTTCCTACAATGTGTTCCATCTTTCCTACAACGTATCCATCTTTCCTTAAAGAAAGTATGTAGATGCCAACCAACTTTGAAAAATAAAAACAAGTTTTTGGAAGCTACTTTTTTTTGTTTTCAAATTTTGGTTTGATTTCTACAAGTACAAATATAGGTAAGATGTACATATCCAAGTAATAAAAAACATTTGATAATGTAGTTGTTGTAGACTTAAATTCCAGGATTCTCTGCTTCAAAGTAGGCTTCCAGAATGGTGTTATCAAACGGGGCCTAATAGTTATCAAGCCTTTAGTGATGTATTTGTGTTTTTTTTTGGGATAGACGATGCTAAATTATAGGAGGTCGAAGTCGAATATTAAAGCTAGCAGATTTAAAGGAACGGTTAAATAAGAAATATCTTAACTGACTTGGAAAGAACAGACTTGAACTTTCTTTCCCAATGGGCTCATTGTTTTCAGTGTGTAGACAGCTAGTAGGATGCAGAAGAGAAGCCTTTATGGTGACTTAGCTGCTGAGTTGGTGTACTTTGTGTTGAAAATATGAAGATACTGTGAGATATCTAGTGTTTATTAGAACTCAAGGACATAGTTGTACAACCTATTGAACTAATCCTATTCAAGTAAGGTCGTAGATCTAGTGTTTATTGTAATTTGTGGCGGTACTTCAATTTCTAGTGCTCCTTAAGTTGAGTATTTTGATTGCCCTTAAAAAAGAACACACGTCAAATGCAATGTGGAGATGGTATGAGAGGAAAACCAAGAACTATTTTGATGAATTCAGTCAACGCTTTTTATGTCTAAGTGATCAGAAAGAAATAGTTGTAGGATATATGATGATAGGGAAATACATAGGGAAGAAGCCTTTTGATTTGGCCAAATTTTGATAATCTTCTTGGAGTTCATCTCTATACCTTTATGTAATGTAATTGCATCATATTAATTAAAACAAGTTGGTGTAGCTTTTTGTTTAATCTATTAATAGTTGTAGGTATTTCATTCATTAACAAAAAAGTTTTTGTTCCTTTATAATTATTGGCTCTTTTTATTAACTTTTGCGTTTTTGATTAGGTATCGGCATTTGATGTTAAATACAGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAAGTCTAGTAAGGGTGCAACACTGAATGAGCTAGTTGAGCTCAAGGGTTGTTCTTCGTGCCTATTTTTTGAGGTTAGAACATCTTCTATGCACTCTTTCCATGTCTAAATTTGGAATTCAATTCATAATCTGGAATTCTGTAAGGTACTACATTTTTTAATTTTTCTTGTTGATTAGATTTAGGTAGTGTTTTAAAAGAGCCCCAAAAAGTACACCTCAAGCTAAAAAAAGCTCCAACGTGGACCTGTGAAAGTTGTGCATCTTTCATGAAAAGTTATAATGTTTCATGTTTTTATGGGGTGGCTGAAAATTTATATATCGAAAGAGGTTAATATATGTGTTTTGTGTATATATACATGTATATATATAGTTTTTTGTTTTTTCTATGCATGGTGCGACTTGGAAAAAACAGCCCACACCTTGTGCCTTGGACTCCAAAGTGTTGTTGCGCCTTTAAAAACATTCATTTAGGATGATAAACCTTTTGATTTCTGTTGTGGTAATAGGATATATGTTTTTGTATCTTTTTCTTTTCGTTTTATTATTTTCCTACATGCCTATTCATCATGTTTGCACACTAAGATCACATGACTTATGTTTCCACCTGTTCCATCACAATGACTTGGAACGATTCGTGCACTTATTTCTAATGGCATTTTTGTCCCCCAGATTTTGTTCTTGCACATGAATCATTTTATTCTCGAAGCTTATTGCAATTCTTCTAGTTTCTTTTTCTTTTTGTTTATGTAATTTTATTTTATTTTTCAAAAAACAAAAATATAGCATTCACACGAGCTTATTTATCGATCTTTTTGTTTCTATTTCCAGTGCAGAAAACATAAAGATCTTTATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTCTTAGTTAATGCCGGTAATTTTAACTAGAAGAAAATCTTATTACTGGATTTCGGCGTTGAAATTATATTTGGTTCTTAAATAAATGCAGTTTTTTATTTTTCCATTCTTGTCTACAGTGCATACAATGGAAGAATTGAAACTTACTGGGAACCATCTGAAAGGTTCTCGTCCTATTTTGACATTCTCGTCGAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATAATTGTTCAGGTATCAATCTAAAAGTTCTGTTAACCATTAATCCTTGAAACTATTTTTCGTTACTCGTGAATGTATCAAATATCAAGTTCTTTGTCCTCTTAATATATTTGATTTCTTCGGTTTCTTCATTTCTTCAGTAAAGTGAACACAGTATGAAATTGATTAATAACGTTTGCATGACTACAAAGTACAATCCTATGAAGTCACATTTTAGTATGGCATAATTTTAGACTCAACAGCATTTTTTTTCTCTCAGATTTTTGGAACTCCAAAGGAGCATCGACATTCTAAACCATACCATGATCATGTTTTTGTTTTCTCCATTGTTGATGACCACATATGGTTCCGAAATTACCAGGTATGTTCTATTTCTATTCTACTTCTTACAGAATTTGATGCTCTCAGTTGTGGATAGCATTCAAATGCACAATTCTACTTGACACCCAAAGCATATACTGGATGTAGTCTTTCTTTTAAACGTTTGCTCACTATATTTTCCAATAAGTGGCTCATGGCAACAGAAAATATATTCTACCCCATGTTAGGAAAAAACATTTGATTATTATCAGTTTCAGTTCAGTATGAATGTCTTGTCAACTATTTTTTATGAATTCGGAACTTGAGTATATTAGCCTTGGGAAGGTCAGGATAAGAGCTTGGTCATGAACCATTCTTGGAGACACAGAAAGATGCCCATTGTGAAGGGTCACAGACTCGCAAGTATCTTATAATTTATATTATTTTGTTTCTAATTAGAATTTATTCATGTAATAATCTTATGTATCCACCTTTGGGTGACAGGAGTTTTCTCCTTCTTTCATAATTTTAATGAAATTGTTTCTTTAACCAGAAAAAGAGACCAGGAAACGCAAGTAGCAAAATGGACTAGATGTGAGGTTTTTCTTTTCAAATACCTTTAGAAGCTTTGAATCCCTCTCTATGTTTGTTTTTGGTTTGTATCTTGGAAGTTTTAGCCTACCTTGTCAAAACCTTTTTCAAGGCTTTAAAGCTTATGACCAAGGCCTGATCTTGATTCAGACAACAGACAACGGTGAAACAAAGAAACAGTGCTCTATTTTTATACGTAATGACCTGACCAAGGCTTCATTCATTCATTAACCATGGTGGTAAACGTAATTTAAAGGAGATCATATTGGATATGAAAAATGTCGGAACCCTAAACTTTTTGGGGAGTATGGATGGTGATGAGAGGGATTAGCACTTCATTGTTGTATTGTGGGCTGGACATTGTATTTAAAAAAGAACGAAATGTGATTTGGGCGAATGTACATGCAGTACAACTTTTACTGCAGAATATGCCAGAACGAAATGTTCCCTAAAAATCTCCTTTGTGTTTTGAATGGATGTCTGAGCAAGAAGCAACGGAGAAGAGTCACAATGTCCTCTGGACAAGCTAAAGACCATTCAAATATCTTCAAAAGTCTGCTCCAATAAGTGTGTAGTGTGTACCCTCAATAAGATAAAGATGTGATTCTGGGTTTCTTCCCCTCTATAACAAAGGTTGCAGCAGCTTGGATATAAAGAAATCCCAGTGACTTTTTCTTTTTGAAATATATCATGCGTGTTGATGGCTCTGTGGGTCAGTTTTCGAAGTTTGGTTCAGGTGCCTATTTTAAGGGTATTGCTTGAGTCCATATTGGGGAGTTCATAAAACCATCAGCACCAGATAGTGTGTTTTGGTTGGGGGGACGCTATCAGGATAAATGCCAGTTGTATCCTTGAGATATATGGGTATAAGTGTCATTGGTTAGGGATTATTTGGGTCATGAATTCAGTAGGTTGTTGGAGGGGTTTGAGATTGAGCAAATATGGGGAATTTGAGGAATTTTGGGGGAGTCTAGGTTTCTCGGGGTGGTTGAGATCTTATGTCTTTTTCCTTTCTTATGTCAATAACATTTCTATTAATTTTTAGTTATAGTTCCTATCAGACTCCTTTGACCTTGTTCACTTTTGCAATAATTGTTGGTATATTTGTCCTTGTTTGGTATTTGTGTGGATGTGATCAGTGATCAGTGATCTATAATCTATTCCCCATCTCACCATTAATCAATGATATGGCGGCGTCTGTCTTGTTTGTTTGGTTTGATCAGATAGCTGTTCCACATAACGAATCGGACAAAGTTGCCCGAGGAGGACTAGATAAAATGACTCTTATCGAGGTTACTATATTTCCTCGTCTTGCTTCGTTTATAAATGAGTATTCCACAATTTTTTTTTATTGGACTTCTAAGATTTGTGTTTTTGACAGGTTGGTCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATATGAGAACCCCCTCTATGTATCACCAAACCAGGTTAGATGACTACTTCTTTATCATCTGGGATTACGTTCTTCACTATGCTTTTTACTCTGCTTTACATATTTCCTGAGAGTAAGCAAACCACATTGACGAGGCATTCATTATGCCCTTACGTTTCTCGAAGTTCATGATTTATAAGGGGATTAAATAAATAAAAATTACAGAAAAAAAGAATGTCATCGCGAAGTCCTAGTATTTATTACCTTTTCAATTCAAGGTTCTTTGAGATATGTTCTGGTCATCCATCTTATCATTAACGCTTTTGGTATTGTCTTTTTTAATGCTCGAAACCCAAAAAGGGAAGTGTTACAGAGAGATTTATCGAAACATTGATAAGGGCTAATCAAAAAACAAAATTCAAAGAAAAACCTGTAAATTGCAACCTGAAATAGTTTGGAAATGAAACAAGTGGGTGTTGGTGGAGTTTGTATGTCAAAGTTGACGCCAAAAATGCTTTTTTTTTTTTTTTTTTCGTATTTGTTGGTTGATGGTGGCCAGTTGTGTCGGCCGCCGGTGAGACACCACTGGAGAGAGCAACTCCACATATATATGATACGACTTTGATGAAGGAAGATGGGAGCGAAAGATATTACATATTGTCTGAATGTGCAATCGTGCAGAAACTAGTGGTCGATCTATGCTAGCCACCTACTTAGGAATTAATTTCTTGCAAGTTTTCTTGACATTTAAATATTGCACGATTAGGTGGTATATCCCATGACGTTAGTCGAGGTGCGTGTAAGCTAGCCTTGACATTCACGGATATCATAAAACAAATTGCAATTCTGCTGAAATTAGAATCGTCCAATCTGAACTTTAATAATTAGATGTATAGGCCTGATCATGTTTATCATGTCTCTCCCTAGATTCGCGCATTGGAGAAGAAGCAGAAAGCCGGGAAATACTCGAAGAAAGTCAAAGCAAAAACGAGGAGGAAGATGCACGAGCTATCGAATCCATTGGAACCAGACGAGTTTGCTGATATGTGGAAGGAATAGTCTCTCGATGTACTCAATTTTGTCTAGACTCAAATCAGAGTTCCTTACCCCAGCGTGAAATGAGAATTTGTTCTATAATACTGTTTATCTGCAGTGAAAATTTTGGCCTTTTATCTACTTAAACCTCGAAATCTGCTTCTGTATGTTCTACATTTTTGTTTAAACATTGGATGCCAAGTATTGATATGATTTTATAAAATTAGTTATTATTCA

mRNA sequence

TCTATCTCCAAAATCCAATCACCTCTTTTCTGCTTATATTCTTATGGTTGTTGTTGTTGGTTTTATTTATTTAAAATAATAATATTTTTACTATTTTATTATGAATGAGGGTTTAGGGCTTAGGGAAACAGTCTCCCCCATGGTCTCTGTATAGCTGAAGTAACCTTCTTTCCCAGTCACCGTCTCGCTTTCTTCTTCCCTGTTCTGATTCGCCGGCCTTCTCTCTTTCTCATTCAATCAATCCAGATTTCTTCAACCTCCGTTTGTTGATTTAGGTTTAGATTTTTTTTTCAATGGCAAAGAAGAGGAAGCACAGCGAGGCTTCGCCGATTGTCTCGGTTAAGAAGGATGACAGCGCCGCTGAGAGACCCAAGCGGACGCTCATGGGTTGGAAGGACAAGGAGGCCGCGAAAGAGACCGAATCGGGTTCCGACCATTCCGTTTTCCGGAACAAAGAGAAGGTTCTCGTCACTTGCTCCCGCCGAATCGATTTTAGGTATCGGCATTTGATGTTAAATACAGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAAGTCTAGTAAGGGTGCAACACTGAATGAGCTAGTTGAGCTCAAGGGTTGTTCTTCGTGCCTATTTTTTGAGTGCAGAAAACATAAAGATCTTTATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTCTTAGTTAATGCCGTGCATACAATGGAAGAATTGAAACTTACTGGGAACCATCTGAAAGGTTCTCGTCCTATTTTGACATTCTCGTCGAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATAATTGTTCAGATTTTTGGAACTCCAAAGGAGCATCGACATTCTAAACCATACCATGATCATGTTTTTGTTTTCTCCATTGTTGATGACCACATATGGTTCCGAAATTACCAGATAGCTGTTCCACATAACGAATCGGACAAAGTTGCCCGAGGAGGACTAGATAAAATGACTCTTATCGAGGTTGGTCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATATGAGAACCCCCTCTATGTATCACCAAACCAGATTCGCGCATTGGAGAAGAAGCAGAAAGCCGGGAAATACTCGAAGAAAGTCAAAGCAAAAACGAGGAGGAAGATGCACGAGCTATCGAATCCATTGGAACCAGACGAGTTTGCTGATATGTGGAAGGAATAGTCTCTCGATGTACTCAATTTTGTCTAGACTCAAATCAGAGTTCCTTACCCCAGCGTGAAATGAGAATTTGTTCTATAATACTGTTTATCTGCAGTGAAAATTTTGGCCTTTTATCTACTTAAACCTCGAAATCTGCTTCTGTATGTTCTACATTTTTGTTTAAACATTGGATGCCAAGTATTGATATGATTTTATAAAATTAGTTATTATTCA

Coding sequence (CDS)

ATGGCAAAGAAGAGGAAGCACAGCGAGGCTTCGCCGATTGTCTCGGTTAAGAAGGATGACAGCGCCGCTGAGAGACCCAAGCGGACGCTCATGGGTTGGAAGGACAAGGAGGCCGCGAAAGAGACCGAATCGGGTTCCGACCATTCCGTTTTCCGGAACAAAGAGAAGGTTCTCGTCACTTGCTCCCGCCGAATCGATTTTAGGTATCGGCATTTGATGTTAAATACAGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAAGTCTAGTAAGGGTGCAACACTGAATGAGCTAGTTGAGCTCAAGGGTTGTTCTTCGTGCCTATTTTTTGAGTGCAGAAAACATAAAGATCTTTATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTCTTAGTTAATGCCGTGCATACAATGGAAGAATTGAAACTTACTGGGAACCATCTGAAAGGTTCTCGTCCTATTTTGACATTCTCGTCGAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATAATTGTTCAGATTTTTGGAACTCCAAAGGAGCATCGACATTCTAAACCATACCATGATCATGTTTTTGTTTTCTCCATTGTTGATGACCACATATGGTTCCGAAATTACCAGATAGCTGTTCCACATAACGAATCGGACAAAGTTGCCCGAGGAGGACTAGATAAAATGACTCTTATCGAGGTTGGTCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATATGAGAACCCCCTCTATGTATCACCAAACCAGATTCGCGCATTGGAGAAGAAGCAGAAAGCCGGGAAATACTCGAAGAAAGTCAAAGCAAAAACGAGGAGGAAGATGCACGAGCTATCGAATCCATTGGAACCAGACGAGTTTGCTGATATGTGGAAGGAATAG

Protein sequence

MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVTCSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

Homology

[Close]

BLAST of Sed0012815 vs. NCBI nr
Match: KAG7037539.1 (Ribosome biogenesis protein BRX1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 627.5 bits (1617), Expect = 6.3e-176
Identity = 301/316 (95.25%), Postives = 308/316 (97.47%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVT 60
           M KKRKHSE  PIVSVKKD+ A ERPKRTL GWKDKE AKETESGSDH+VFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHK 120
           CSRRI+FRYRHLMLN VSLLPHCKKDNKVES+SSKGATLNELVELKGCSSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240
           IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 317
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of Sed0012815 vs. NCBI nr
Match: KAG6588467.1 (Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 627.5 bits (1617), Expect = 6.3e-176
Identity = 301/316 (95.25%), Postives = 308/316 (97.47%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVT 60
           M KKRKHSE  PIVSVKKD+ A ERPKRTL GWKDKE AKETESGSDH+VFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHK 120
           CSRRI+FRYRHLMLN VSLLPHCKKDNKVES+SSKGATLNELVELKGCSSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240
           IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 317
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of Sed0012815 vs. NCBI nr
Match: XP_022930733.1 (ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata] >XP_022930743.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata])

HSP 1 Score: 624.4 bits (1609), Expect = 5.4e-175
Identity = 300/316 (94.94%), Postives = 307/316 (97.15%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVT 60
           M KKRKHSE  PIVSVKKD+ A ERPKRTL GWKDKE AKETESGSDH+VFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHK 120
           CSRRI+FRYRHLMLN VSLLPHCKKDNKVES+SSKGATLNELVELKGCSSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240
           IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 317
           LSNPLE DEFADMWKE
Sbjct: 301 LSNPLEQDEFADMWKE 316

[Close]

BLAST of Sed0012815 vs. NCBI nr
Match: XP_023530270.1 (ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita pepo subsp. pepo] >XP_023530271.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita pepo subsp. pepo] >XP_023530272.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 623.6 bits (1607), Expect = 9.2e-175
Identity = 298/316 (94.30%), Postives = 307/316 (97.15%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVT 60
           M KKRKHSE  PIVSVKKD+ A ERPKRTL GWKDKE AKETESGSDH+VFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHK 120
           CSRRI+FRYRHLMLN VSLLPHCKKDNKVES+SSKGATLNELVELKGC SCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCCSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+L+FSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLSFSSNFDKDVHWKLLKEI 180

Query: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240
           I+QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 317
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of Sed0012815 vs. NCBI nr
Match: XP_038894805.1 (ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida])

HSP 1 Score: 622.5 bits (1604), Expect = 2.0e-174
Identity = 299/316 (94.62%), Postives = 307/316 (97.15%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVT 60
           M KKRKHSE  P  SVKKDD+A ERPKRTLMGWKDKE +KE++SGSDH++FRNKEKVLVT
Sbjct: 1   MVKKRKHSETLPAESVKKDDAALERPKRTLMGWKDKEVSKESDSGSDHAIFRNKEKVLVT 60

Query: 61  CSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHK 120
           CSRRI+FRYRHLMLN VSLLPHCKKDNKVES+SSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180

Query: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240
           IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 317
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of Sed0012815 vs. ExPASy Swiss-Prot
Match: Q9LE16 (Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-1 PE=2 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 3.9e-152
Identity = 257/316 (81.33%), Postives = 280/316 (88.61%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVT 60
           M +KRKHSE      VK  DSA ERP+RTL+GWKDK+   E    +  SVFRNKEKVLVT
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 61  CSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHK 120
           CSRRI+FRYRHLMLN VSLLPHCKKD+KVE+KSS+GATLNEL+ELKG SSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLY+WM K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D HWKLLKE+
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLKEM 180

Query: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240
           + QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDK+ARG LDKMTLIE
Sbjct: 181 LTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGDLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 317
           LSNPLEPDEF DMW +
Sbjct: 301 LSNPLEPDEFTDMWND 314

[Close]

BLAST of Sed0012815 vs. ExPASy Swiss-Prot
Match: Q9C928 (Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-2 PE=2 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 7.3e-151
Identity = 255/318 (80.19%), Postives = 281/318 (88.36%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKK-DDSAAERPKRTLMGWKDK-EAAKETESGSDHSVFRNKEKVL 60
           M +KRKHSE      VKK D+ A +RPKRTL+GWKDK E   E       S F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 61  VTCSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRK 120
           VTCSRRI FRYR LMLN VSLLPHCKKD+KVE+KSSKGATLNEL+ELK  +SCLFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLY+WM K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD HWKLLK
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           E++ Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQI+VPHNESDK+A+GGLDKMTL
Sbjct: 181 EMLTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAKGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+KAKTR+KM
Sbjct: 241 IEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKIKAKTRKKM 300

Query: 301 HELSNPLEPDEFADMWKE 317
           HELSNPLEPDEFADMWK+
Sbjct: 301 HELSNPLEPDEFADMWKD 318

[Close]

BLAST of Sed0012815 vs. ExPASy Swiss-Prot
Match: Q4QQT6 (Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus OX=10116 GN=Brix1 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.3e-66
Identity = 135/290 (46.55%), Postives = 181/290 (62.41%), Query Frame = 0


Query: 34  KDKEAAKETESGSDH-------SVFRNKEKVLVTCSRRIDFRYRHLMLNTVSLLPHCKKD 93
           K  + AKE E   D          ++NKE++L+  SR I+FR RHLM +   L+PH K D
Sbjct: 31  KQADVAKEAEEEKDRIPGPVCKGKWKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKAD 90

Query: 94  NKVESKSSKGATLNELVELKGCSSCLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTME 153
            K++ K  K   +NE+ E+K C+ C++FE +K +DLY+W++  P GPS KFLV  +HT+ 
Sbjct: 91  TKMDRK-DKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLA 150

Query: 154 ELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEIIVQIFGTPKEHRHSKPYHDHVFVFSI 213
           ELK+TGN LKGSRP+L+F   FD   H+ LLKE ++QIF TP+ H  S+P+ DHVF F+I
Sbjct: 151 ELKMTGNCLKGSRPLLSFDPAFDDLPHYALLKEFLIQIFSTPRYHPKSQPFVDHVFTFTI 210

Query: 214 VDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENP 273
           +D+ IWFRN+QI     E D           L+E+GPRF LN IKIF GSFGGPTLYENP
Sbjct: 211 LDNRIWFRNFQII----EED---------AALVEIGPRFVLNLIKIFQGSFGGPTLYENP 270

Query: 274 LYVSPNQIRALEKKQKAGKYSKK--VKAKTRRKMHELSNPLEPDEFADMW 315
            Y SPN  R + +   A KY +K  VK   + +  E    L  D  AD++
Sbjct: 271 HYQSPNMHRRVVRSITAAKYREKQQVKDVQKSRKKEPKTILPHDPTADVF 306

[Close]

BLAST of Sed0012815 vs. ExPASy Swiss-Prot
Match: Q9DCA5 (Ribosome biogenesis protein BRX1 homolog OS=Mus musculus OX=10090 GN=Brix1 PE=1 SV=3)

HSP 1 Score: 251.9 bits (642), Expect = 9.5e-66
Identity = 137/306 (44.77%), Postives = 190/306 (62.09%), Query Frame = 0


Query: 23  AERPKRTL----MGWKDKEAAKETESGSDHSV--------FRNKEKVLVTCSRRIDFRYR 82
           A++PKR+        K  + AKE E  +   +        ++NKE++L+  SR I+FR R
Sbjct: 16  AKKPKRSSKDAGQPAKQADVAKEAEEENRDRIPGPVCKGKWKNKERILIFSSRGINFRTR 75

Query: 83  HLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHKDLYLWMAKCP 142
           HLM +   L+PH K D K++ K  K   +NE+ E+K C+ C++FE +K +DLY+W++  P
Sbjct: 76  HLMQDLRMLMPHSKADTKMDRK-DKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSNSP 135

Query: 143 SGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEIIVQIFGTPKE 202
            GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD   H+ LLKE ++QIF TP+ 
Sbjct: 136 HGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDDLPHYALLKEFLIQIFSTPRY 195

Query: 203 HRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFCLNPI 262
           H  S+P+ DHVF F+I+D+ IWFRN+QI     E D           L+E+GPRF LN I
Sbjct: 196 HPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---------AALVEIGPRFVLNLI 255

Query: 263 KIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMH--ELSNPLEPD 315
           KIF GSFGGPTLYENP Y SPN  R + +   A KY ++ + K  +K+   E    L  D
Sbjct: 256 KIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAKYRERQQVKDVQKLRKKEPKTILPHD 307

[Close]

BLAST of Sed0012815 vs. ExPASy Swiss-Prot
Match: Q3SZZ0 (Ribosome biogenesis protein BRX1 homolog OS=Bos taurus OX=9913 GN=BRIX1 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-65
Identity = 140/318 (44.03%), Postives = 197/318 (61.95%), Query Frame = 0


Query: 3   KKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSV----FRNKEKVL 62
           +KR+   A     +K+D    + P +       +EAA+E +      V    ++NKE++L
Sbjct: 6   RKRRGGLAVQAKKLKRDAKDGKLPAKA--NDVSEEAAEEEKDRIPGPVCKGKWKNKERIL 65

Query: 63  VTCSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRK 122
           +  SR I+FR RHLM +   L+PH K D K++ K  K   +NE+ E+K C+ C++FE +K
Sbjct: 66  IFSSRGINFRTRHLMQDLRMLMPHSKADTKMDRK-DKLFVINEVCEMKNCNKCIYFEAKK 125

Query: 123 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 182
            +DLY+W++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD+  H+ LLK
Sbjct: 126 KQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLK 185

Query: 183 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 242
           E+++QIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D           L
Sbjct: 186 ELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---------AAL 245

Query: 243 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 302
           +E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +K + K  +K+
Sbjct: 246 VEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAKYREKQQVKDVQKL 305

Query: 303 H--ELSNPLEPDEFADMW 315
              E    L  D  AD++
Sbjct: 306 RKKEPKTILPHDPTADVF 307

[Close]

BLAST of Sed0012815 vs. ExPASy TrEMBL
Match: A0A6J1EW75 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437121 PE=3 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 2.6e-175
Identity = 300/316 (94.94%), Postives = 307/316 (97.15%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVT 60
           M KKRKHSE  PIVSVKKD+ A ERPKRTL GWKDKE AKETESGSDH+VFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHK 120
           CSRRI+FRYRHLMLN VSLLPHCKKDNKVES+SSKGATLNELVELKGCSSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240
           IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 317
           LSNPLE DEFADMWKE
Sbjct: 301 LSNPLEQDEFADMWKE 316

[Close]

BLAST of Sed0012815 vs. ExPASy TrEMBL
Match: A0A6J1I0V9 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467989 PE=3 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 2.9e-174
Identity = 298/316 (94.30%), Postives = 306/316 (96.84%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVT 60
           MAKKRKHSE  PIVSVKKD+ A ERPKRTL GWKDKE  KE ESGSDH+VFRNKEKVLVT
Sbjct: 1   MAKKRKHSETLPIVSVKKDEGALERPKRTLTGWKDKEVVKEAESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHK 120
           CSRRI+FRYRHLMLN VSLLPHCKKDNKVES+SSKGATLNELVELKGCSSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240
           IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNES KVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESVKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKK+KAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKKKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 317
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of Sed0012815 vs. ExPASy TrEMBL
Match: A0A1S3BQS3 (ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE=3 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 3.8e-174
Identity = 297/316 (93.99%), Postives = 308/316 (97.47%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVT 60
           MAKKRKHSE  P VSVKKD++A ERPKRTLMGWKDKE  K++E+GSDH+VFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHK 120
           CSRRI+FRYRHLMLN VSLLPHCKKDNKVES+SSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240
           I+QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 317
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of Sed0012815 vs. ExPASy TrEMBL
Match: A0A5D3CG95 (Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003710 PE=3 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 3.8e-174
Identity = 297/316 (93.99%), Postives = 308/316 (97.47%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVT 60
           MAKKRKHSE  P VSVKKD++A ERPKRTLMGWKDKE  K++E+GSDH+VFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHK 120
           CSRRI+FRYRHLMLN VSLLPHCKKDNKVES+SSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240
           I+QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 317
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of Sed0012815 vs. ExPASy TrEMBL
Match: A0A6J1E0T2 (ribosome biogenesis protein BRX1 homolog 1-like OS=Momordica charantia OX=3673 GN=LOC111026105 PE=3 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 1.7e-171
Identity = 297/317 (93.69%), Postives = 305/317 (96.21%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVT 60
           MAKKRKHSEA   V+VKKD  A ERPKRTLMGWKDKE  KE+ESGSDH+VFRNKEKVLVT
Sbjct: 1   MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHK 120
           CSRRI+FRYRHLMLN VSLLPHCKKDNKVES+SSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNES-DKVARGGLDKMTLI 240
           IVQIFG PKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNES DKVARGGLDK+TLI
Sbjct: 181 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 240

Query: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMH 300
           EVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQIRALEKKQKAGKYSKKVKAKTRRKMH
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQIRALEKKQKAGKYSKKVKAKTRRKMH 300

Query: 301 ELSNPLEPDEFADMWKE 317
           ELSNPLEPDEFADMWKE
Sbjct: 301 ELSNPLEPDEFADMWKE 317

[Close]

BLAST of Sed0012815 vs. TAIR 10
Match: AT3G15460.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 538.9 bits (1387), Expect = 2.8e-153
Identity = 257/316 (81.33%), Postives = 280/316 (88.61%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKKDDSAAERPKRTLMGWKDKEAAKETESGSDHSVFRNKEKVLVT 60
           M +KRKHSE      VK  DSA ERP+RTL+GWKDK+   E    +  SVFRNKEKVLVT
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 61  CSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRKHK 120
           CSRRI+FRYRHLMLN VSLLPHCKKD+KVE+KSS+GATLNEL+ELKG SSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLY+WM K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D HWKLLKE+
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLKEM 180

Query: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240
           + QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDK+ARG LDKMTLIE
Sbjct: 181 LTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGDLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 317
           LSNPLEPDEF DMW +
Sbjct: 301 LSNPLEPDEFTDMWND 314

[Close]

BLAST of Sed0012815 vs. TAIR 10
Match: AT1G52930.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 534.6 bits (1376), Expect = 5.2e-152
Identity = 255/318 (80.19%), Postives = 281/318 (88.36%), Query Frame = 0


Query: 1   MAKKRKHSEASPIVSVKK-DDSAAERPKRTLMGWKDK-EAAKETESGSDHSVFRNKEKVL 60
           M +KRKHSE      VKK D+ A +RPKRTL+GWKDK E   E       S F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 61  VTCSRRIDFRYRHLMLNTVSLLPHCKKDNKVESKSSKGATLNELVELKGCSSCLFFECRK 120
           VTCSRRI FRYR LMLN VSLLPHCKKD+KVE+KSSKGATLNEL+ELK  +SCLFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLY+WM K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD HWKLLK
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           E++ Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQI+VPHNESDK+A+GGLDKMTL
Sbjct: 181 EMLTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAKGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+KAKTR+KM
Sbjct: 241 IEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKIKAKTRKKM 300

Query: 301 HELSNPLEPDEFADMWKE 317
           HELSNPLEPDEFADMWK+
Sbjct: 301 HELSNPLEPDEFADMWKD 318

The following BLAST results are available for this feature:

BLAST of Sed0012815 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037539.1	6.3e-176	95.25	Ribosome biogenesis protein BRX1-like 1 [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6588467.1	6.3e-176	95.25	Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022930733.1	5.4e-175	94.94	ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata] >XP_0229307...	[more]
XP_023530270.1	9.2e-175	94.30	ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_038894805.1	2.0e-174	94.62	ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida]	[more]

BLAST of Sed0012815 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE16	3.9e-152	81.33	Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q9C928	7.3e-151	80.19	Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q4QQT6	3.3e-66	46.55	Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus OX=10116 GN=Brix1 ...	[more]
Q9DCA5	9.5e-66	44.77	Ribosome biogenesis protein BRX1 homolog OS=Mus musculus OX=10090 GN=Brix1 PE=1 ...	[more]
Q3SZZ0	1.6e-65	44.03	Ribosome biogenesis protein BRX1 homolog OS=Bos taurus OX=9913 GN=BRIX1 PE=2 SV=...	[more]

BLAST of Sed0012815 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EW75	2.6e-175	94.94	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I0V9	2.9e-174	94.30	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3BQS3	3.8e-174	93.99	ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE...	[more]
A0A5D3CG95	3.8e-174	93.99	Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1E0T2	1.7e-171	93.69	ribosome biogenesis protein BRX1 homolog 1-like OS=Momordica charantia OX=3673 G...	[more]

BLAST of Sed0012815 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15460.1	2.8e-153	81.33	Ribosomal RNA processing Brix domain protein	[more]
AT1G52930.1	5.2e-152	80.19	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 58..229 e-value: 2.1E-36 score: 136.9
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 63..218 e-value: 5.2E-27 score: 95.2
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 55..235 score: 24.556917
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR13634:SF3	RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG 2	coord: 1..221
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 56..219
IPR026532	Ribosome biogenesis protein BRX1	PANTHER	PTHR13634	RIBOSOME BIOGENESIS PROTEIN BRIX	coord: 1..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012815.1	Sed0012815.1	mRNA
Sed0012815.2	Sed0012815.2	mRNA
Sed0012815.3	Sed0012815.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0019843	rRNA binding