Sed0012790 (gene) Chayote v1

Overview
NameSed0012790
Typegene
OrganismSechium edule (Chayote v1)
Descriptionubiquitin-conjugating enzyme E2 20-like
LocationLG01: 60909756 .. 60911422 (+)
RNA-Seq ExpressionSed0012790
SyntenySed0012790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAGAGCCGTTGGAAATTCAAAAGCAACCTAATTGGAATCTTCGCATAACGTTCACTAAATATTTTTTAATATTTAGGGTTCAAAACAAAGCCCTAATTCTTCATCTCTCTTCTTTTGTGGAGAAATTGCTCAGATCGGAGAGAATGGCGGCCATTAACCGATACTCCGACAACACGACGCCGGCGAACCCCGTTGTTGTTTCTCCGGCCAAGCAATCCTTACAGCCGCCCAAAACCGCCGATTCTCACTCCGTTCTCAAAAGGTATAATTTCATTTCCTCATTTTGATTCGCAATCGCTCTTTTTTGTTTTTGCAATCGCCTCTGCTTTCTTGTGATTTATTTGTTGCAGGTTTCTGGATTTAATTTTTGAGATGGATTGGTTTTTGTAGTCTTTTGCAATGATCTTTTTAGGAGGAATTAGATTTTCCTTCCTCTTGCATTATGTTCTTGTGTTTTTTTATGTTAAAATATAATTAGTGAAGAACCAATCTGATTGAGGAACTCTGTTTATCTTCAACTTAACCAAAGATCTTACTTTTAATTTTTGTTGTGTTTATCTGACAACAGGTTGCAGTCTGAGTTAATGGCTCTAATGGTAAGACTTGGTTGGCCCTTTGAATCATCTATTAGTTTCAAACTGTTAAGTTTTGAAGTTCTTGGGATTGAGATTCTAGAATTTGCTATTAAGTTCATGTTTATATGACATTTTGCAGATGAGTGGAGAGTCAGGGATCTCAGCCTTTCCTGAGGAAGACAACATCTTCTGCTGGAAAGGGACGATTACTGGAAGCAAAGACACAGTGTTTGAAGGTACAGAATACAGGCTTTCCTTTTCTTTCCCTAACGATTACCCCTTTAAGCCGCCGAAGGTGAAGTTCGAGACTGGCTGCTTTCACCCGAATGTCGACGTTTATGGCAACATTTGCTTGGACATTCTTCAGGTATTTTTAGCTTTGGCCAAATCTTTAGCATTCAAATGATATCTAGCAATTAGAATTGAGTGATGTTTCATCTTTTGTAGGATAAATGGTCATCAGCATATGATGTGAGAACAATACTCTTGTCTATCCAGAGTCTTCTTGGAGGTATTTCCTTGACTTTGGAGGATGGGTTAGAATAATAATGGAATATTAGAATTTGCAATGAGCTTTCTGTTGCCATTTGTTTGCAGAACCAAACATAAGTTCACCTTTAAACACACAAGCAGCCCAATTGTGGAGTAATCAAGAAGGTGGGTTATTGTTGTAACACACAAATTTTAATTCTCTCTTTGAGTTGCTATGTCATGAAAGTTGGCTCACTTATGTTTTACTGTGTTTGCTGTTGTAGAATATCGAAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCAGCTTAACTTGTTTTAGTTTACTAAGTGAAGAAACTGGAAATTGTGTCTCACTCCTTTTGCGCTAAATAGGAGATTTCCAAATGATGTTTTTTTTTCTCTTTCTTTCAAGTGTGTTCTTGATTTCTTTACCTGGATGTTAAAGACAGGATATATTATGTCTCCTGTATTGTTATAATATGGAAATTTCTAGTCATCTTGTCATGCTCTCTCTGTTTGTTTTTTTTTTTTTTGTAAGTTCCTGAAATTGACATGATGCTAAGATAATTCATAATCAATATTCTCCAAC

mRNA sequence

AAGAAAGAGCCGTTGGAAATTCAAAAGCAACCTAATTGGAATCTTCGCATAACGTTCACTAAATATTTTTTAATATTTAGGGTTCAAAACAAAGCCCTAATTCTTCATCTCTCTTCTTTTGTGGAGAAATTGCTCAGATCGGAGAGAATGGCGGCCATTAACCGATACTCCGACAACACGACGCCGGCGAACCCCGTTGTTGTTTCTCCGGCCAAGCAATCCTTACAGCCGCCCAAAACCGCCGATTCTCACTCCGTTCTCAAAAGGTTGCAGTCTGAGTTAATGGCTCTAATGATGAGTGGAGAGTCAGGGATCTCAGCCTTTCCTGAGGAAGACAACATCTTCTGCTGGAAAGGGACGATTACTGGAAGCAAAGACACAGTGTTTGAAGGTACAGAATACAGGCTTTCCTTTTCTTTCCCTAACGATTACCCCTTTAAGCCGCCGAAGGTGAAGTTCGAGACTGGCTGCTTTCACCCGAATGTCGACGTTTATGGCAACATTTGCTTGGACATTCTTCAGGATAAATGGTCATCAGCATATGATGTGAGAACAATACTCTTGTCTATCCAGAGTCTTCTTGGAGAACCAAACATAAGTTCACCTTTAAACACACAAGCAGCCCAATTGTGGAGTAATCAAGAAGAATATCGAAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCAGCTTAACTTGTTTTAGTTTACTAAGTGAAGAAACTGGAAATTGTGTCTCACTCCTTTTGCGCTAAATAGGAGATTTCCAAATGATGTTTTTTTTTCTCTTTCTTTCAAGTGTGTTCTTGATTTCTTTACCTGGATGTTAAAGACAGGATATATTATGTCTCCTGTATTGTTATAATATGGAAATTTCTAGTCATCTTGTCATGCTCTCTCTGTTTGTTTTTTTTTTTTTTGTAAGTTCCTGAAATTGACATGATGCTAAGATAATTCATAATCAATATTCTCCAAC

Coding sequence (CDS)

ATGGCGGCCATTAACCGATACTCCGACAACACGACGCCGGCGAACCCCGTTGTTGTTTCTCCGGCCAAGCAATCCTTACAGCCGCCCAAAACCGCCGATTCTCACTCCGTTCTCAAAAGGTTGCAGTCTGAGTTAATGGCTCTAATGATGAGTGGAGAGTCAGGGATCTCAGCCTTTCCTGAGGAAGACAACATCTTCTGCTGGAAAGGGACGATTACTGGAAGCAAAGACACAGTGTTTGAAGGTACAGAATACAGGCTTTCCTTTTCTTTCCCTAACGATTACCCCTTTAAGCCGCCGAAGGTGAAGTTCGAGACTGGCTGCTTTCACCCGAATGTCGACGTTTATGGCAACATTTGCTTGGACATTCTTCAGGATAAATGGTCATCAGCATATGATGTGAGAACAATACTCTTGTCTATCCAGAGTCTTCTTGGAGAACCAAACATAAGTTCACCTTTAAACACACAAGCAGCCCAATTGTGGAGTAATCAAGAAGAATATCGAAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCAGCTTAA

Protein sequence

MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTAAA
Homology
[Close]
BLAST of Sed0012790 vs. NCBI nr
Match: XP_038900928.1 (LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 20 [Benincasa hispida])

HSP 1 Score: 354.8 bits (909), Expect = 4.6e-94
Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MAAINRY+DNTTPANP VVSPAKQSL P KTADS SVLKRLQSELMALMMSG+SGISAFP
Sbjct: 1   MAAINRYTDNTTPANP-VVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC
Sbjct: 61  EEDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180

Query: 181 AA 183
           AA
Sbjct: 181 AA 181

[Close]
BLAST of Sed0012790 vs. NCBI nr
Match: XP_022957735.1 (ubiquitin-conjugating enzyme E2 20-like [Cucurbita moschata] >KAG6605929.1 Ubiquitin-conjugating enzyme E2 19, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035878.1 Ubiquitin-conjugating enzyme E2 19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354.8 bits (909), Expect = 4.6e-94
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MAAINRY+DNTTPANP VVSPAKQSL P KTADS SVLKRLQSELMALMMSG+SGISAFP
Sbjct: 1   MAAINRYTDNTTPANP-VVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPT
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPT 180

Query: 181 AAA 184
           AAA
Sbjct: 181 AAA 182

[Close]
BLAST of Sed0012790 vs. NCBI nr
Match: XP_023533942.1 (ubiquitin-conjugating enzyme E2 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.4 bits (908), Expect = 6.0e-94
Identity = 174/183 (95.08%), Postives = 178/183 (97.27%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MAAINRY+DNTTPANP VVSPAKQSL P KTADS SVLKRLQSELMALMMSG+SGISAFP
Sbjct: 1   MAAINRYTDNTTPANP-VVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPT
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPT 180

Query: 181 AAA 184
           AAA
Sbjct: 181 AAA 182

[Close]
BLAST of Sed0012790 vs. NCBI nr
Match: XP_004140207.1 (ubiquitin-conjugating enzyme E2 20 [Cucumis sativus] >XP_008449688.1 PREDICTED: ubiquitin-conjugating enzyme E2 20 [Cucumis melo] >KAA0061782.1 ubiquitin-conjugating enzyme E2 20-like isoform X3 [Cucumis melo var. makuwa] >KGN48113.1 hypothetical protein Csa_003824 [Cucumis sativus] >TYJ96123.1 ubiquitin-conjugating enzyme E2 20-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93
Identity = 174/182 (95.60%), Postives = 177/182 (97.25%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MAAINRY+DNT PANP VVSPAKQSL P KTADS SVLKRLQSELMALMMSG+SGISAFP
Sbjct: 1   MAAINRYTDNTAPANP-VVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC
Sbjct: 61  EEDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180

Query: 181 AA 183
           AA
Sbjct: 181 AA 181

[Close]
BLAST of Sed0012790 vs. NCBI nr
Match: XP_022995155.1 (ubiquitin-conjugating enzyme E2 20-like [Cucurbita maxima])

HSP 1 Score: 351.3 bits (900), Expect = 5.1e-93
Identity = 172/183 (93.99%), Postives = 177/183 (96.72%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MAAINRY+DNTTP+NP VVSPAKQSL P K ADS SVLKRLQSELMALMMSG+SGISAFP
Sbjct: 1   MAAINRYTDNTTPSNP-VVSPAKQSLPPAKAADSQSVLKRLQSELMALMMSGDSGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPT
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPT 180

Query: 181 AAA 184
           AAA
Sbjct: 181 AAA 182

[Close]
BLAST of Sed0012790 vs. ExPASy Swiss-Prot
Match: Q8L7T3 (Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana OX=3702 GN=UBC20 PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 4.5e-84
Identity = 155/181 (85.64%), Postives = 160/181 (88.40%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MAA+N Y  N TPA+P   + +KQ   P KT DS SVLKRLQSELM LMM G  GISAFP
Sbjct: 1   MAAVNGYQGN-TPADPPASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLS SF NDYPFKPPKVKFET CFHPNVDVYGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPS 180

Query: 181 A 182
           A
Sbjct: 181 A 180

[Close]
BLAST of Sed0012790 vs. ExPASy Swiss-Prot
Match: Q9LJZ5 (Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana OX=3702 GN=UBC19 PE=1 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 4.6e-81
Identity = 148/181 (81.77%), Postives = 155/181 (85.64%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MA +N Y+ NT  A     + +KQS  P KT DSHSVLKRLQSELM LMM  + GISAFP
Sbjct: 1   MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLS +F NDYPFK PKVKFET CFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN QAAQLWSNQEEYRKMVEKLYKP  
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLN 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]
BLAST of Sed0012790 vs. ExPASy Swiss-Prot
Match: Q54XS6 (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum OX=44689 GN=ube2c PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.2e-54
Identity = 99/150 (66.00%), Postives = 120/150 (80.00%), Query Frame = 0 

Query: 32  ADSHSVLKRLQSELMALMMSGESGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSF 91
           +  HSV KRLQSELM LMM    GISAFP+ DNIF W GTI G+KDTV+E  E+++S  F
Sbjct: 2   SQDHSVSKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKF 61

Query: 92  PNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNIS 151
           P DYP+KPP VKFET CFHPNVD  GNICLDIL+DKWS  Y+VR++L+SIQSLLGEPN  
Sbjct: 62  PTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNE 121

Query: 152 SPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 182
           SPLN+ AA LWSNQ+EY+K+++K Y+  T+
Sbjct: 122 SPLNSYAASLWSNQDEYKKVLDKRYQEATS 151

[Close]
BLAST of Sed0012790 vs. ExPASy Swiss-Prot
Match: Q95044 (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima OX=6584 GN=UBE2C PE=1 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.0e-51
Identity = 91/145 (62.76%), Postives = 117/145 (80.69%), Query Frame = 0 

Query: 33  DSHSVLKRLQSELMALMMSGESGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFP 92
           + HSV KRLQ EL  L+MSG+ GI+AFP+ DN+F W  T+ G KDTV+E  +Y+L+  FP
Sbjct: 27  ERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFP 86

Query: 93  NDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISS 152
           +DYP+KPP VKF T C+HPNVD  GNICLDIL++ W+++YDVRTILLS+QSLLGEPN +S
Sbjct: 87  SDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNAS 146

Query: 153 PLNTQAAQLWSNQEEYRKMVEKLYK 178
           PLN QAA +WSNQ EY+K++ + YK
Sbjct: 147 PLNAQAADMWSNQTEYKKVLHEKYK 171

[Close]
BLAST of Sed0012790 vs. ExPASy Swiss-Prot
Match: Q4R9D1 (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis OX=9541 GN=UBE2C PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 8.5e-51
Identity = 100/169 (59.17%), Postives = 120/169 (71.01%), Query Frame = 0 

Query: 8   SDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFPEEDNIFC 67
           S N  PA    V+ A++  +P   A    V KRLQ ELM LMMSG+ GISAFPE DN+F 
Sbjct: 3   SQNRDPA-ATSVTAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFK 62

Query: 68  WKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDK 127
           W GTI G+  TV+E   Y+LS  FP+ YP+  P VKF T C+HPNVD  GNICLDIL+DK
Sbjct: 63  WVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDK 122

Query: 128 WSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 177
           WS+ YDVRTILLSIQSLLGEPNI SPLNT AA+LW N   ++K +++ Y
Sbjct: 123 WSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170

[Close]
BLAST of Sed0012790 vs. ExPASy TrEMBL
Match: A0A6J1H1C8 (ubiquitin-conjugating enzyme E2 20-like OS=Cucurbita moschata OX=3662 GN=LOC111459191 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.2e-94
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MAAINRY+DNTTPANP VVSPAKQSL P KTADS SVLKRLQSELMALMMSG+SGISAFP
Sbjct: 1   MAAINRYTDNTTPANP-VVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPT
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPT 180

Query: 181 AAA 184
           AAA
Sbjct: 181 AAA 182

[Close]
BLAST of Sed0012790 vs. ExPASy TrEMBL
Match: A0A5D3BA03 (Ubiquitin-conjugating enzyme E2 20-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00870 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.5e-94
Identity = 174/182 (95.60%), Postives = 177/182 (97.25%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MAAINRY+DNT PANP VVSPAKQSL P KTADS SVLKRLQSELMALMMSG+SGISAFP
Sbjct: 1   MAAINRYTDNTAPANP-VVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC
Sbjct: 61  EEDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180

Query: 181 AA 183
           AA
Sbjct: 181 AA 181

[Close]
BLAST of Sed0012790 vs. ExPASy TrEMBL
Match: A0A0A0KF07 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G434330 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.5e-94
Identity = 174/182 (95.60%), Postives = 177/182 (97.25%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MAAINRY+DNT PANP VVSPAKQSL P KTADS SVLKRLQSELMALMMSG+SGISAFP
Sbjct: 1   MAAINRYTDNTAPANP-VVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC
Sbjct: 61  EEDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180

Query: 181 AA 183
           AA
Sbjct: 181 AA 181

[Close]
BLAST of Sed0012790 vs. ExPASy TrEMBL
Match: A0A1S3BLY8 (ubiquitin-conjugating enzyme E2 20 OS=Cucumis melo OX=3656 GN=LOC103491487 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.5e-94
Identity = 174/182 (95.60%), Postives = 177/182 (97.25%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MAAINRY+DNT PANP VVSPAKQSL P KTADS SVLKRLQSELMALMMSG+SGISAFP
Sbjct: 1   MAAINRYTDNTAPANP-VVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC
Sbjct: 61  EEDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180

Query: 181 AA 183
           AA
Sbjct: 181 AA 181

[Close]
BLAST of Sed0012790 vs. ExPASy TrEMBL
Match: A0A6J1K3C1 (ubiquitin-conjugating enzyme E2 20-like OS=Cucurbita maxima OX=3661 GN=LOC111490778 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.5e-93
Identity = 172/183 (93.99%), Postives = 177/183 (96.72%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MAAINRY+DNTTP+NP VVSPAKQSL P K ADS SVLKRLQSELMALMMSG+SGISAFP
Sbjct: 1   MAAINRYTDNTTPSNP-VVSPAKQSLPPAKAADSQSVLKRLQSELMALMMSGDSGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPT
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPT 180

Query: 181 AAA 184
           AAA
Sbjct: 181 AAA 182

[Close]
BLAST of Sed0012790 vs. TAIR 10
Match: AT1G50490.1 (ubiquitin-conjugating enzyme 20 )

HSP 1 Score: 312.0 bits (798), Expect = 3.2e-85
Identity = 155/181 (85.64%), Postives = 160/181 (88.40%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MAA+N Y  N TPA+P   + +KQ   P KT DS SVLKRLQSELM LMM G  GISAFP
Sbjct: 1   MAAVNGYQGN-TPADPPASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLS SF NDYPFKPPKVKFET CFHPNVDVYGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPS 180

Query: 181 A 182
           A
Sbjct: 181 A 180

[Close]
BLAST of Sed0012790 vs. TAIR 10
Match: AT3G20060.1 (ubiquitin-conjugating enzyme19 )

HSP 1 Score: 302.0 bits (772), Expect = 3.3e-82
Identity = 148/181 (81.77%), Postives = 155/181 (85.64%), Query Frame = 0 

Query: 1   MAAINRYSDNTTPANPVVVSPAKQSLQPPKTADSHSVLKRLQSELMALMMSGESGISAFP 60
           MA +N Y+ NT  A     + +KQS  P KT DSHSVLKRLQSELM LMM  + GISAFP
Sbjct: 1   MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLS +F NDYPFK PKVKFET CFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN QAAQLWSNQEEYRKMVEKLYKP  
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLN 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]
BLAST of Sed0012790 vs. TAIR 10
Match: AT3G20060.2 (ubiquitin-conjugating enzyme19 )

HSP 1 Score: 257.3 bits (656), Expect = 9.3e-69
Identity = 122/136 (89.71%), Postives = 125/136 (91.91%), Query Frame = 0 

Query: 46  MALMMSGESGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFE 105
           M LMM  + GISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLS +F NDYPFK PKVKFE
Sbjct: 1   MGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFE 60

Query: 106 TGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQ 165
           T CFHPNVD+YGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN QAAQLWSNQ
Sbjct: 61  TCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQ 120

Query: 166 EEYRKMVEKLYKPPTA 182
           EEYRKMVEKLYKP  A
Sbjct: 121 EEYRKMVEKLYKPLNA 136

[Close]
BLAST of Sed0012790 vs. TAIR 10
Match: AT1G14400.1 (ubiquitin carrier protein 1 )

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-30
Identity = 63/135 (46.67%), Postives = 88/135 (65.19%), Query Frame = 0 

Query: 39  KRLQSELMALMMSGESGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFK 98
           KRL  +   L     +GIS  P+++NI  W   I G  DT ++G  ++LS  F  DYP K
Sbjct: 7   KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66

Query: 99  PPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQA 158
           PP V+F +  FHPN+   G+ICLDILQ++WS  YDV  IL SIQSLL +PN +SP N++A
Sbjct: 67  PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126

Query: 159 AQLWS-NQEEYRKMV 173
           A+++S ++ EY + V
Sbjct: 127 ARMYSESKREYNRRV 141

[Close]
BLAST of Sed0012790 vs. TAIR 10
Match: AT1G14400.2 (ubiquitin carrier protein 1 )

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-30
Identity = 63/135 (46.67%), Postives = 88/135 (65.19%), Query Frame = 0 

Query: 39  KRLQSELMALMMSGESGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFK 98
           KRL  +   L     +GIS  P+++NI  W   I G  DT ++G  ++LS  F  DYP K
Sbjct: 7   KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66

Query: 99  PPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQA 158
           PP V+F +  FHPN+   G+ICLDILQ++WS  YDV  IL SIQSLL +PN +SP N++A
Sbjct: 67  PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126

Query: 159 AQLWS-NQEEYRKMV 173
           A+++S ++ EY + V
Sbjct: 127 ARMYSESKREYNRRV 141

The following BLAST results are available for this feature:
BLAST of Sed0012790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038900928.14.6e-9496.15LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 20 [Benincasa hispida][more]
XP_022957735.14.6e-9495.63ubiquitin-conjugating enzyme E2 20-like [Cucurbita moschata] >KAG6605929.1 Ubiqu... [more]
XP_023533942.16.0e-9495.08ubiquitin-conjugating enzyme E2 20-like [Cucurbita pepo subsp. pepo][more]
XP_004140207.11.7e-9395.60ubiquitin-conjugating enzyme E2 20 [Cucumis sativus] >XP_008449688.1 PREDICTED: ... [more]
XP_022995155.15.1e-9393.99ubiquitin-conjugating enzyme E2 20-like [Cucurbita maxima][more]
BLAST of Sed0012790 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L7T34.5e-8485.64Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana OX=3702 GN=UBC20 PE=2... [more]
Q9LJZ54.6e-8181.77Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana OX=3702 GN=UBC19 PE=1... [more]
Q54XS62.2e-5466.00Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum OX=44689 ... [more]
Q950441.0e-5162.76Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima OX=6584 GN=UBE2C PE=1 S... [more]
Q4R9D18.5e-5159.17Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis OX=9541 GN=UBE2C PE=2 S... [more]
BLAST of Sed0012790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H1C82.2e-9495.63ubiquitin-conjugating enzyme E2 20-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A5D3BA038.5e-9495.60Ubiquitin-conjugating enzyme E2 20-like isoform X3 OS=Cucumis melo var. makuwa O... [more]
A0A0A0KF078.5e-9495.60UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G434330 PE... [more]
A0A1S3BLY88.5e-9495.60ubiquitin-conjugating enzyme E2 20 OS=Cucumis melo OX=3656 GN=LOC103491487 PE=3 ... [more]
A0A6J1K3C12.5e-9393.99ubiquitin-conjugating enzyme E2 20-like OS=Cucurbita maxima OX=3661 GN=LOC111490... [more]
BLAST of Sed0012790 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G50490.13.2e-8585.64ubiquitin-conjugating enzyme 20 [more]
AT3G20060.13.3e-8281.77ubiquitin-conjugating enzyme19 [more]
AT3G20060.29.3e-6989.71ubiquitin-conjugating enzyme19 [more]
AT1G14400.11.0e-3046.67ubiquitin carrier protein 1 [more]
AT1G14400.21.0e-3046.67ubiquitin carrier protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 39..181
e-value: 2.6E-60
score: 216.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availablePANTHERPTHR24068:SF373BNAC06G03670D PROTEINcoord: 12..179
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 12..179
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 30..179
e-value: 2.4E-57
score: 194.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 28..175
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 40..174
e-value: 2.2E-47
score: 160.2
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 36..181
score: 48.77702
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 39..176
e-value: 1.22902E-64
score: 193.573
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 109..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0012790.1Sed0012790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031145 anaphase-promoting complex-dependent catabolic process
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0030071 regulation of mitotic metaphase/anaphase transition
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0061631 ubiquitin conjugating enzyme activity