Sed0012778 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGAATTTCAATAGCAACTAGTCTGTGTGTTCTGGTGGCAGCAATGGTGCTTGTGATCGCTGGATCAGCCCGTGTGGCCGATGCGGTGGACTGTAATCCTACCGAGCTCTCCCCATGTCTCCCCGCAATTGAGTCGTCGACTCCGCCCTCTAGCACTTGCTGCTCAAAGATGGAAGAGCAGACGCCATGCCTCTGCGAATATTTTAAGAATCCAAGCTTCAAGCCTTACATTTCGGGTGGCAAACGGGTCGCTGCGGCCTGCGGCGTTTCCGTCTCGTGTGAGGGTTAG ATGAAGAGAATTTCAATAGCAACTAGTCTGTGTGTTCTGGTGGCAGCAATGGTGCTTGTGATCGCTGGATCAGCCCGTGTGGCCGATGCGGTGGACTGTAATCCTACCGAGCTCTCCCCATGTCTCCCCGCAATTGAGTCGTCGACTCCGCCCTCTAGCACTTGCTGCTCAAAGATGGAAGAGCAGACGCCATGCCTCTGCGAATATTTTAAGAATCCAAGCTTCAAGCCTTACATTTCGGGTGGCAAACGGGTCGCTGCGGCCTGCGGCGTTTCCGTCTCGTGTGAGGGTTAG ATGAAGAGAATTTCAATAGCAACTAGTCTGTGTGTTCTGGTGGCAGCAATGGTGCTTGTGATCGCTGGATCAGCCCGTGTGGCCGATGCGGTGGACTGTAATCCTACCGAGCTCTCCCCATGTCTCCCCGCAATTGAGTCGTCGACTCCGCCCTCTAGCACTTGCTGCTCAAAGATGGAAGAGCAGACGCCATGCCTCTGCGAATATTTTAAGAATCCAAGCTTCAAGCCTTACATTTCGGGTGGCAAACGGGTCGCTGCGGCCTGCGGCGTTTCCGTCTCGTGTGAGGGTTAG MKRISIATSLCVLVAAMVLVIAGSARVADAVDCNPTELSPCLPAIESSTPPSSTCCSKMEEQTPCLCEYFKNPSFKPYISGGKRVAAACGVSVSCEG Homology
BLAST of Sed0012778 vs. NCBI nr
Match: KAG6581743.1 (hypothetical protein SDJN03_21745, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.1 bits (344), Expect = 8.0e-29 Identity = 70/94 (74.47%), Postives = 81/94 (86.17%), Query Frame = 0
BLAST of Sed0012778 vs. NCBI nr
Match: XP_022955891.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata]) HSP 1 Score: 136.3 bits (342), Expect = 1.4e-28 Identity = 69/94 (73.40%), Postives = 81/94 (86.17%), Query Frame = 0
BLAST of Sed0012778 vs. NCBI nr
Match: XP_023527040.1 (non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 134.8 bits (338), Expect = 4.0e-28 Identity = 68/94 (72.34%), Postives = 80/94 (85.11%), Query Frame = 0
BLAST of Sed0012778 vs. NCBI nr
Match: OAY60437.1 (hypothetical protein MANES_01G112500v8 [Manihot esculenta]) HSP 1 Score: 106.7 bits (265), Expect = 1.2e-19 Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 0
BLAST of Sed0012778 vs. NCBI nr
Match: KAA0064159.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK02870.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 105.9 bits (263), Expect = 2.0e-19 Identity = 48/99 (48.48%), Postives = 73/99 (73.74%), Query Frame = 0
BLAST of Sed0012778 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.3e-17 Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 0
BLAST of Sed0012778 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.0e-14 Identity = 32/65 (49.23%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of Sed0012778 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.4e-12 Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of Sed0012778 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 6.8e-07 Identity = 27/83 (32.53%), Postives = 41/83 (49.40%), Query Frame = 0
BLAST of Sed0012778 vs. ExPASy TrEMBL
Match: A0A6J1GV37 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111457740 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 6.6e-29 Identity = 69/94 (73.40%), Postives = 81/94 (86.17%), Query Frame = 0
BLAST of Sed0012778 vs. ExPASy TrEMBL
Match: A0A2C9WL84 (AAI domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G112500 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 5.6e-20 Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 0
BLAST of Sed0012778 vs. ExPASy TrEMBL
Match: A0A5A7VF50 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00770 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 9.5e-20 Identity = 48/99 (48.48%), Postives = 73/99 (73.74%), Query Frame = 0
BLAST of Sed0012778 vs. ExPASy TrEMBL
Match: A0A0A0L0Z5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G135200 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.6e-19 Identity = 58/95 (61.05%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of Sed0012778 vs. ExPASy TrEMBL
Match: A0A0A0KW09 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141230 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 4.7e-19 Identity = 53/99 (53.54%), Postives = 72/99 (72.73%), Query Frame = 0
BLAST of Sed0012778 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 1.6e-14 Identity = 37/92 (40.22%), Postives = 61/92 (66.30%), Query Frame = 0
BLAST of Sed0012778 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 72.8 bits (177), Expect = 1.7e-13 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of Sed0012778 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 71.2 bits (173), Expect = 5.0e-13 Identity = 37/90 (41.11%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of Sed0012778 vs. TAIR 10
Match: AT1G07747.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 70.5 bits (171), Expect = 8.5e-13 Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = 0
BLAST of Sed0012778 vs. TAIR 10
Match: AT1G43667.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12 Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|