Sed0012753 (gene) Chayote v1

Overview


Name	Sed0012753
Type	gene
Organism	Sechium edule (Chayote v1)
Description	rapid alkalinization factor-like
Location	LG07: 2486554 .. 2486910 (-)
RNA-Seq Expression	Sed0012753
Synteny	Sed0012753

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCAAGGTTTCTTTTCTCCTTCCATTTTGCTTAATCGCTACAATCCTGACCACCTCCTCCGCTGCAGTATCGGCCACCGGCACCGGGAGCCCAAGCTGGGTCCTGGATGGAGCTCAAGCTCGCTGTCATGGCTCCATGGCAAAGTGCATGATGGCCGACATTGAATTCGAGATGAACTCCGAAATCAACAGACGGATATTGGAGGATTTAAACTACATAAGCTATGATGCTCTCTTGGCCAACAAGATACCATGCTCGCAGAGAGGAGCATCATACTACAATTGCCAGCCAGGCGCCGAGGCGAACCCCTATGACCGTGGCTGCAGTGCTATTTCTCGTTGCCGAAGCTAA

mRNA sequence

ATGGCGGCCAAGGTTTCTTTTCTCCTTCCATTTTGCTTAATCGCTACAATCCTGACCACCTCCTCCGCTGCAGTATCGGCCACCGGCACCGGGAGCCCAAGCTGGGTCCTGGATGGAGCTCAAGCTCGCTGTCATGGCTCCATGGCAAAGTGCATGATGGCCGACATTGAATTCGAGATGAACTCCGAAATCAACAGACGGATATTGGAGGATTTAAACTACATAAGCTATGATGCTCTCTTGGCCAACAAGATACCATGCTCGCAGAGAGGAGCATCATACTACAATTGCCAGCCAGGCGCCGAGGCGAACCCCTATGACCGTGGCTGCAGTGCTATTTCTCGTTGCCGAAGCTAA

Coding sequence (CDS)

ATGGCGGCCAAGGTTTCTTTTCTCCTTCCATTTTGCTTAATCGCTACAATCCTGACCACCTCCTCCGCTGCAGTATCGGCCACCGGCACCGGGAGCCCAAGCTGGGTCCTGGATGGAGCTCAAGCTCGCTGTCATGGCTCCATGGCAAAGTGCATGATGGCCGACATTGAATTCGAGATGAACTCCGAAATCAACAGACGGATATTGGAGGATTTAAACTACATAAGCTATGATGCTCTCTTGGCCAACAAGATACCATGCTCGCAGAGAGGAGCATCATACTACAATTGCCAGCCAGGCGCCGAGGCGAACCCCTATGACCGTGGCTGCAGTGCTATTTCTCGTTGCCGAAGCTAA

Protein sequence

MAAKVSFLLPFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMMADIEFEMNSEINRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS

Homology

[Close]

BLAST of Sed0012753 vs. NCBI nr
Match: XP_038896330.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 200.3 bits (508), Expect = 9.3e-48
Identity = 98/118 (83.05%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MAAKVSFLLPFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMMADIEFEM 60
           MAAKVSFLLPF L+A ILT SS AV  T T +PSWVLDGA+ARCHGSMA+CMM DIEFEM
Sbjct: 1   MAAKVSFLLPFFLVAAILTVSSTAVLTTSTKTPSWVLDGARARCHGSMAECMMGDIEFEM 60

Query: 61  NSEINRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           NS+INRRIL DLNYISYDAL AN +PCS+RGASYYNCQPGAEANPYDRGC+AISRCRS
Sbjct: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYDRGCNAISRCRS 118

[Close]

BLAST of Sed0012753 vs. NCBI nr
Match: XP_022153599.1 (protein RALF-like 33 [Momordica charantia])

HSP 1 Score: 194.9 bits (494), Expect = 3.9e-46
Identity = 96/118 (81.36%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 1   MAAKVSFLLPFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMMADIEFEM 60
           MAAKVSFLLPFCLI  ILT SS AV A  T SPSWVLDGA+ARCHGSMA+CMM +IE+EM
Sbjct: 1   MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 60

Query: 61  NSEINRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           NSEINRRIL   NYISY+AL AN +PCS+RGASYYNCQPGAEANPYDRGCSAI+RCRS
Sbjct: 61  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 118

[Close]

BLAST of Sed0012753 vs. NCBI nr
Match: XP_022953165.1 (rapid alkalinization factor-like [Cucurbita moschata])

HSP 1 Score: 192.2 bits (487), Expect = 2.5e-45
Identity = 95/118 (80.51%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 1   MAAKVSFLLPFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMMADIEFEM 60
           MAAK+SFLLPFC IA  LT  S AVSAT T  PSWVLD A A CHGSMA CMM DIEF+M
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTAVSATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 61  NSEINRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           +SEINRRIL D+NYISYDAL ANK+PCS+RGASYYNCQPGAEANPYDRGCSAI+RCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of Sed0012753 vs. NCBI nr
Match: KAG7014377.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.3 bits (477), Expect = 3.7e-44
Identity = 93/118 (78.81%), Postives = 100/118 (84.75%), Query Frame = 0


Query: 1   MAAKVSFLLPFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMMADIEFEM 60
           MAAK+SFLLPFC IA  LT  S  V AT T  PSWVLD A A CHGSMA CMM DIEF+M
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 61  NSEINRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           +SEINRRIL D+NYISYDAL ANK+PCS+RGASYYNCQPGAEANPYDRGCSAI+RCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of Sed0012753 vs. NCBI nr
Match: XP_008451660.1 (PREDICTED: rapid alkalinization factor-like [Cucumis melo] >KAA0068010.1 rapid alkalinization factor-like [Cucumis melo var. makuwa] >TYK18117.1 rapid alkalinization factor-like [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 2.2e-41
Identity = 90/118 (76.27%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 1   MAAKVSFLLPFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMMADIEFEM 60
           MAAKVSFLLP  L+  ILT SS A       +PSWVL GA ARCHGSMA+CM  DIEFEM
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSSTAT------TPSWVLGGAHARCHGSMAECMKEDIEFEM 60

Query: 61  NSEINRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           +SEINRRIL DLNYISYDAL AN +PCS++GASYYNCQPGAEANPYDRGC+AISRCRS
Sbjct: 61  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of Sed0012753 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-23
Identity = 58/111 (52.25%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 9   LPFCLIATILTTSSAAVSATGTGSPSWVLDG-AQARCHGSMAKCMMADIEFEMNSEINRR 68
           L  C++      S AA  A  +G+  WV+   +   C GS+ +C+  + EFE++SE NRR
Sbjct: 7   LILCVLIGAFFISMAA--AGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELDSESNRR 66

Query: 69  ILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           IL    YISY AL  N +PCS+RGASYYNC+PGA+ANPY RGCSAI+RCRS
Sbjct: 67  ILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of Sed0012753 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-23
Identity = 58/110 (52.73%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 10  PFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMM--ADIEFEMNSEINRR 69
           P  +I  ILT      + T   S  +V    +++C+G++A+C +  A+ EFEM+SEINRR
Sbjct: 8   PVAIIIAILTVHFLFAAVTSQSSGDFV--PIESKCNGTIAECSLSTAEEEFEMDSEINRR 67

Query: 70  ILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCR 118
           IL    YISY AL  N +PCS+RGASYYNC+ GA+ANPY RGCSAI+RCR
Sbjct: 68  ILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Sed0012753 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-22
Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 7   FLLPFCLIATILTTSSA-AVSATGTGSPSWVLDGAQ-ARCHGSMAKCMMADIEFEMNSEI 66
           FL    L+  I+++    A  A   G  +W   G   + CHGS+A+C+ A+ E EM+SEI
Sbjct: 8   FLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAE-EEEMDSEI 67

Query: 67  NRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           NRRIL    YISY +L  N +PCS+RGASYYNCQ GA+ANPY RGCS I+RCRS
Sbjct: 68  NRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Sed0012753 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-20
Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 14  IATILTTSSAAVSATGT--GSPSWVLDGAQ---ARCHGSMAKCMMADIEFEMNSEINRRI 73
           +  IL    +AV +TG    S  +V  G+    + C GS+A+C+  + E E +S+I+RRI
Sbjct: 10  VIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISRRI 69

Query: 74  LEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCR 118
           L    YISY A+  N +PCS+RGASYYNCQ GA+ANPY RGCS I+RCR
Sbjct: 70  LAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of Sed0012753 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-20
Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 41  QARCHGSMAKCMMA-------DI---------EFEMNSEINRRILEDLNYISYDALLANK 100
           +  C G++A+C ++       D+         EFEM+SEINRRIL    YISY AL  N 
Sbjct: 44  ETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNT 103

Query: 101 IPCSQRGASYYNCQPGAEANPYDRGCSAISRCR 118
           IPCS+RGASYYNC+ GA+ANPY RGCSAI+RCR
Sbjct: 104 IPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136

[Close]

BLAST of Sed0012753 vs. ExPASy TrEMBL
Match: A0A6J1DJJ4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111021064 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.9e-46
Identity = 96/118 (81.36%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 1   MAAKVSFLLPFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMMADIEFEM 60
           MAAKVSFLLPFCLI  ILT SS AV A  T SPSWVLDGA+ARCHGSMA+CMM +IE+EM
Sbjct: 1   MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 60

Query: 61  NSEINRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           NSEINRRIL   NYISY+AL AN +PCS+RGASYYNCQPGAEANPYDRGCSAI+RCRS
Sbjct: 61  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 118

[Close]

BLAST of Sed0012753 vs. ExPASy TrEMBL
Match: A0A6J1GNW5 (rapid alkalinization factor-like OS=Cucurbita moschata OX=3662 GN=LOC111455786 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-45
Identity = 95/118 (80.51%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 1   MAAKVSFLLPFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMMADIEFEM 60
           MAAK+SFLLPFC IA  LT  S AVSAT T  PSWVLD A A CHGSMA CMM DIEF+M
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTAVSATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 61  NSEINRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           +SEINRRIL D+NYISYDAL ANK+PCS+RGASYYNCQPGAEANPYDRGCSAI+RCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of Sed0012753 vs. ExPASy TrEMBL
Match: A0A5A7VLB3 (Rapid alkalinization factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00450 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.1e-41
Identity = 90/118 (76.27%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 1   MAAKVSFLLPFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMMADIEFEM 60
           MAAKVSFLLP  L+  ILT SS A       +PSWVL GA ARCHGSMA+CM  DIEFEM
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSSTAT------TPSWVLGGAHARCHGSMAECMKEDIEFEM 60

Query: 61  NSEINRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           +SEINRRIL DLNYISYDAL AN +PCS++GASYYNCQPGAEANPYDRGC+AISRCRS
Sbjct: 61  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of Sed0012753 vs. ExPASy TrEMBL
Match: A0A1S3BRF1 (rapid alkalinization factor-like OS=Cucumis melo OX=3656 GN=LOC103492893 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.1e-41
Identity = 90/118 (76.27%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 1   MAAKVSFLLPFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMMADIEFEM 60
           MAAKVSFLLP  L+  ILT SS A       +PSWVL GA ARCHGSMA+CM  DIEFEM
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSSTAT------TPSWVLGGAHARCHGSMAECMKEDIEFEM 60

Query: 61  NSEINRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           +SEINRRIL DLNYISYDAL AN +PCS++GASYYNCQPGAEANPYDRGC+AISRCRS
Sbjct: 61  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of Sed0012753 vs. ExPASy TrEMBL
Match: A0A0A0K607 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396340 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.8e-41
Identity = 89/118 (75.42%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 1   MAAKVSFLLPFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMMADIEFEM 60
           MA  VSFLLP  L+  ILT SS A       +PSWVLDGA ARCHGSMA+CMM DIEF+M
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTA------KTPSWVLDGAHARCHGSMAECMMEDIEFQM 60

Query: 61  NSEINRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           +SEINRRIL DLNYISYDAL AN +PCS++GASYYNCQPGAEANPYDRGC+AISRCRS
Sbjct: 61  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of Sed0012753 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 110.5 bits (275), Expect = 9.1e-25
Identity = 58/110 (52.73%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 10  PFCLIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMM--ADIEFEMNSEINRR 69
           P  +I  ILT      + T   S  +V    +++C+G++A+C +  A+ EFEM+SEINRR
Sbjct: 8   PVAIIIAILTVHFLFAAVTSQSSGDFV--PIESKCNGTIAECSLSTAEEEFEMDSEINRR 67

Query: 70  ILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCR 118
           IL    YISY AL  N +PCS+RGASYYNC+ GA+ANPY RGCSAI+RCR
Sbjct: 68  ILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Sed0012753 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 107.1 bits (266), Expect = 1.0e-23
Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 7   FLLPFCLIATILTTSSA-AVSATGTGSPSWVLDGAQ-ARCHGSMAKCMMADIEFEMNSEI 66
           FL    L+  I+++    A  A   G  +W   G   + CHGS+A+C+ A+ E EM+SEI
Sbjct: 8   FLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAE-EEEMDSEI 67

Query: 67  NRRILEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCRS 119
           NRRIL    YISY +L  N +PCS+RGASYYNCQ GA+ANPY RGCS I+RCRS
Sbjct: 68  NRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Sed0012753 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 100.9 bits (250), Expect = 7.2e-22
Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 14  IATILTTSSAAVSATGT--GSPSWVLDGAQ---ARCHGSMAKCMMADIEFEMNSEINRRI 73
           +  IL    +AV +TG    S  +V  G+    + C GS+A+C+  + E E +S+I+RRI
Sbjct: 10  VIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISRRI 69

Query: 74  LEDLNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRCR 118
           L    YISY A+  N +PCS+RGASYYNCQ GA+ANPY RGCS I+RCR
Sbjct: 70  LAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of Sed0012753 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-21
Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 41  QARCHGSMAKCMMA-------DI---------EFEMNSEINRRILEDLNYISYDALLANK 100
           +  C G++A+C ++       D+         EFEM+SEINRRIL    YISY AL  N 
Sbjct: 44  ETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNT 103

Query: 101 IPCSQRGASYYNCQPGAEANPYDRGCSAISRCR 118
           IPCS+RGASYYNC+ GA+ANPY RGCSAI+RCR
Sbjct: 104 IPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136

[Close]

BLAST of Sed0012753 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 71.6 bits (174), Expect = 4.7e-13
Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 13  LIATILTTSSAAVSATGTGSPSWVLDGAQARCHGSMAKCMMADIEFEMNSEINRR-ILED 72
           LI  +LT +  A SA  T    W L  +     G + +    ++++ M+SE NRR +   
Sbjct: 7   LILGLLTLAVVAESANAT----WTLTKSCVNGQGCIGE--DGELDYLMDSETNRRQLAAR 66

Query: 73  LNYISYDALLANKIPCSQRGASYYNCQPGAEANPYDRGCSAISRC 117
            +YISY AL  N +PCS+RG SYY+C+    ANPY RGCS I+ C
Sbjct: 67  RSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105

The following BLAST results are available for this feature:

BLAST of Sed0012753 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896330.1	9.3e-48	83.05	protein RALF-like 33 [Benincasa hispida]	[more]
XP_022153599.1	3.9e-46	81.36	protein RALF-like 33 [Momordica charantia]	[more]
XP_022953165.1	2.5e-45	80.51	rapid alkalinization factor-like [Cucurbita moschata]	[more]
KAG7014377.1	3.7e-44	78.81	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008451660.1	2.2e-41	76.27	PREDICTED: rapid alkalinization factor-like [Cucumis melo] >KAA0068010.1 rapid a...	[more]

BLAST of Sed0012753 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945T0	1.3e-23	52.25	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q8L9P8	1.3e-23	52.73	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9SRY3	1.4e-22	52.63	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q9MA62	1.0e-20	49.54	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]
Q9LUS7	1.7e-20	54.84	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]

BLAST of Sed0012753 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJJ4	1.9e-46	81.36	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111021064 PE=3 SV=1	[more]
A0A6J1GNW5	1.2e-45	80.51	rapid alkalinization factor-like OS=Cucurbita moschata OX=3662 GN=LOC111455786 P...	[more]
A0A5A7VLB3	1.1e-41	76.27	Rapid alkalinization factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BRF1	1.1e-41	76.27	rapid alkalinization factor-like OS=Cucumis melo OX=3656 GN=LOC103492893 PE=3 SV...	[more]
A0A0A0K607	1.8e-41	75.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396340 PE=3 SV=1	[more]

BLAST of Sed0012753 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	9.1e-25	52.73	ralf-like 33	[more]
AT1G02900.1	1.0e-23	52.63	rapid alkalinization factor 1	[more]
AT3G05490.1	7.2e-22	49.54	ralf-like 22	[more]
AT3G16570.1	1.2e-21	54.84	rapid alkalinization factor 23	[more]
AT2G33775.1	4.7e-13	40.95	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 57..117 e-value: 3.2E-26 score: 92.1
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 7..118
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 7..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012753.1	Sed0012753.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region