Sed0012742 (gene) Chayote v1

Overview


Name	Sed0012742
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SNF1-related protein kinase regulatory subunit beta-2-like isoform X1
Location	LG04: 46068857 .. 46073097 (-)
RNA-Seq Expression	Sed0012742
Synteny	Sed0012742

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCTCTGGAGATGTCTCTTTTGAAGATCTACATCGAGCACATTGCTGTCAGGATGGGCCAAGGAAAGAAGCAGACTCATGTAAGCACATTGCTCCACCGAGTGGCGGTGTCAACTGTCAGCTTCTTCAATTTGACGATGTCAACATTTAACCACCAAACTCTTCAAGGACGGCAGTGGAGTTTTACCATGTACGTGCTATCTCCTAACGTGGCCTGCATTTATTTTGGGTTTTCTAATCTCTTTCTCTCTATGCTTTTTTTTCCCCCTCCACTCTGGTTTATCTCTGATGGTTGGATTTTGGATAGAGAAAATTCACTTTCATTAGATTCTTGCACCGCCTTTTCCCCAAGGACCAAATGATTGCAAAAGTTTAAGCCTAAATTGGTATAATTTTCCCTCAACTTTTAACTGTTTACCATTGATTGGATGGACAAAAGAACGAGATGCCACTTTACCTTTTCATTTTGATACATCAGCACTCCTTTCTCTGGCTTTGGCCATTTGGGTTATTATGAAGCTCTTTTTTCAAAAAGTAGTTTCTCATTTCTTTTGGCAAATTTAAGAAACGTTCTTTTTTATTTTAGAAATAAGAAACGGAAACGATTATCAAACAAGTCTGTTCCTTAAAAATGAGAAACAAAAATAAGAATCAGGAAACAAGAACGTTATCAAACGTGGCCTATGAAGCTCTTTTTTCTCGCTTATATTTATCACATAATATAAAGAGGGGATTTTCACTCACTTTTTTTCTAATTAGGAAGATTCTCTCTTGAATAAAGATTGCTTAATCCAGCGACCTTCCACTTCAGTCTCTTTCAGGTTATTGAGTGATTGGACGACACTGATCAAGTTATCTCAATGTTTTAATCTGCTGTGTGTAGCCGTAGAGCAGATTTGGAGCACAGATCCATATGTTCACGTGCTGTGAAAAGGGCTTTCCTTGAAATTGATTTGGAAACAAGTCACATGGGGAGGCAGAGTTTTACTTTAGGAATGTCTTTCCATGGGGGAGCTTCGTGGGCTTGCAAAAGCAGCCTTTTGTTACTTGGACTTCCACCCAGGTTGAGTATTTGACTTCGTACAACAACAGAGACAAGTTTGCTTAGGCGACATCTTCTTCCCTAAGCAAAACCAGTTAGAGGTCAAGTCGAATATCATATAAGTATTTCTTTCAAAAGCTTGTTAGATGAATTCTACAATTTTATTTTAGAAAGTTTCACAAATAAGCACAAGAAGTTGTTATCCGAAAGCAACATTTAGTACCAATCAACAGCTCATGCTTGCTTGTTCTAAACGGGAGTTTTCTTCTGTCATTTCAAGCCTCTTTTGGCAATTTTCTAACGCGATCTCTGGCCTTTGTATATCATTTGTTTTTAAGTTCATGAGTTGCCCGTGAGCACGAAACCGAGGCCCCAATAGCCAAGATAGGTAAAAGTAAAAAAGAAATTTTAGAGAGAGAAATATTTAAGTGATGTATTGACATTACCTGAATATTGATGTATGCATATATGGTCCAATTTGGGCACATTTTATTTTTCTTTAATTTTTATTTTCTATTTTTTGATTAAAGAATGACAAAATGTGGCACAAATTAAGGCAGATATGTAGACTTTAATATTTAGGTGATGCCTATTTCTGTTTTGGACGATTATTTGGAGCCCATCTCAGTGTAGTGGCAGTTCATGAGTGGTTGTTGGAGGCTTCAAGAGACTCCCAACACAGCAGACGGAGGGAAAAAAATGCTGATGACGAGGCAAAATTCCCTTTCAAATCAGCATAATTAGCAACCCACTAAAAAGAATCTTCCAAATTCATTGGAGAGAAGAAAACCACAGTTTATCTTTCAGTTGGATTTGTTTTAATCACAGCAGCAATAAAAGAAGTGGAAAAGAAGGGAGAGAGAAGAAAGAGAGATGACAAATTGCACTTTCTAATATAAAACTTAACCAAATTCCATAAATACACAGCTGTAGCCTGAGGCAGGAAGATGCTAACAGAATCCTACCTTCACCCAACTCTTGGTTTGGATTCTAAATTTTTGTGGGATTGATCAACTGACGTAAGTATGTGTAAATATCTTCTGCTTTTATGGGTTTTTGTCTTTTTCCTCAATATTCCTGGTTACTCCCTTTTTTATTTACCTTTGGCCAATTTTTTGAGTTAGAATTCTGATTTGGGCTGTCGTCCTTATTTATATCCTGATTCTTGTTCTGTTTTTCAGTGATGGACAAGGCTGAGGGTAGGAAAAATGGTGAGGCCCCCTCTGGAGTTCATAAGTTTCAAGAGAATCGTGACCAAAGGATGGACTGTACAGAGGATGCAGCACATAACGGCAACCACACATGCTCGTTTTCAGAGTCCAGAATTCAGATTTCTCCACATGGCTTAGGCTCACTTCCAGCCCTCATCTCTAATCCTCAGGTTTGTTCTTCCGTATCTTTTTTTTTTAAGCAAATGATTATGCTCTTTCTCTCTCACTTTCACCCACTTCCTTGATTCTCTAAACTCTGAACCTGTTTAAATGGAGGCATTTTCTTTTAAAAATTATGGAATTTGTTCTAAGCATCCTGTGATATGTTAAATAATCGAATATGCAGTTAATTGTCTCTCTTTCAGCTTTTTGTTGATGCTTTTCTTACCTTACAAACGACGGGCCATTTTTTATTATTTGTGCAACTGCCCTTTGTTCTGTGAATTGTTGGATATGTTCTTCTCCTTCTCTCCTGTTGAAGGCGACTTGCTAAAAAGGTTCTGCTTTCTATTCTTTGTGTTAAGAAAATCACTGTCTTTAACTTCATCCTGAAAATTGTAATTCATGATAGTTCAACATGTTGCAAATTGATCTTCTAATGCTTCTTTTTTTACCAAAAAAGGAAAAATTTTCATTTCCAATGATTAATATTAGGTGCAATTCAAGCAGTAAAGATCTGGTAAAAAAAAAATAAATTCAAGCAGTAAAGATGGCCGATTTATCATTTTTTTTTTATTGTTTGTTGTCTGAAAAGTACAGAAGAAAATAGAGCACCTAAAACTGGCATTAATTGCCTGATAACTATGGAAATAGAGGGTGTCTACACCGAGTGGGACCTTGTATTTATAAGAACAAATCCGCCAAAAATATCATACCTACTTCGGTTTATGAACCACCAATAACACTTTCAAATTCACCCTCTCATAGTCTTGTTTTCATTCGTTTTCACTTCTAGTACGCTACAGTGTCCTTGTCAAGTCCTGGTCTGATGCTACAACCTCAACCTCAATCTTTGCCTCAGAGTGCTGCATTCAGTGAAAATGTGTTACATGAGACAAGGACCCAAGTGAGGATCTCGTGGAATCATGGCGGCAATCAAGTAGCCATTGTTGGATCATGGGACAATTGGCAGACAAGGTATTCAACTTCGATGATGTTCTTTTCTATCTCTCATTCCTTTTCATTTGGACCTTTAATTGTGTTGAGTTTCCCTGTATTTCTGTTAGAGAGCTTCTGCAGAACACCGGTGAGGAGTTTGTGGTTGTGAAAACTCTGCCGGTCGGTATCTACCATTACCACTTCATAGTTGATGGTTGGTTGGTTTATGCTCCAGATCTACCCTGGTTTTGTGATGATTCAGGGAATGCATACAATATATTAGACTTGCAGGTAAGTTCCATGGCTAAAGTTTATGTTCCTTAAGAATGCTGTTATTGCTTTTCGACATAATTCATATTGAACTCTGTTTTTCAGGGCCATGTATCTGAATTGCCTATAAGTATGTCCGAATTTGAAACTCCTCCTTCTCCGCCGTCGAGTTATGATAACCAATGCTTGAACGAAGGTGATTTCAGCAGACCTCCCCCAGAAATACCTCCACAACTGCAAGGAACCGCGTTGAACGATCCATCTTCTTCGGTTGATGGTCAACAATTGCCAGTCACGCCTCGAAGTACGGAACTAAATCATCTCTATCTGCAGAGCAATGTCCAAGATCAGTTTGTAGCACTTGGTTCTTCTCAAAGAATTCATGAAAAGTATGTTACAATGTTTGTATTCAAGCCTTTATCAAGAACTAGGTGATGTCCATACTCTTCTTCCTCCCTCCACATTTTCATTTTCGAACCCGAAATTGAGTAAAACAATCTCAGTATTGCTCGAAAAGTTGCCTTCCTTGTAAGTTCTGTAGGTTGGGAAGAGTTATGTAGCTAAAACGAGATTCTTTCACGCTGGGCATCATTAATTCAATTGATATTTACTCTGG

mRNA sequence

ATGGCAGCTCTGGAGATGTCTCTTTTGAAGATCTACATCGAGCACATTGCTGTCAGGATGGGCCAAGGAAAGAAGCAGACTCATGTAAGCACATTGCTCCACCGAGTGGCGGTGTCAACTGTCAGCTTCTTCAATTTGACGATGTCAACATTTAACCACCAAACTCTTCAAGGACGGCAGTGGATGATGGACAAGGCTGAGGGTAGGAAAAATGGTGAGGCCCCCTCTGGAGTTCATAAGTTTCAAGAGAATCGTGACCAAAGGATGGACTGTACAGAGGATGCAGCACATAACGGCAACCACACATGCTCGTTTTCAGAGTCCAGAATTCAGATTTCTCCACATGGCTTAGGCTCACTTCCAGCCCTCATCTCTAATCCTCAGTACGCTACAGTGTCCTTGTCAAGTCCTGGTCTGATGCTACAACCTCAACCTCAATCTTTGCCTCAGAGTGCTGCATTCAGTGAAAATGTGTTACATGAGACAAGGACCCAAGTGAGGATCTCGTGGAATCATGGCGGCAATCAAGTAGCCATTGTTGGATCATGGGACAATTGGCAGACAAGAGAGCTTCTGCAGAACACCGGTGAGGAGTTTGTGGTTGTGAAAACTCTGCCGGTCGGTATCTACCATTACCACTTCATAGTTGATGGTTGGTTGGTTTATGCTCCAGATCTACCCTGGTTTTGTGATGATTCAGGGAATGCATACAATATATTAGACTTGCAGGGCCATGTATCTGAATTGCCTATAAGTATGTCCGAATTTGAAACTCCTCCTTCTCCGCCGTCGAGTTATGATAACCAATGCTTGAACGAAGGTGATTTCAGCAGACCTCCCCCAGAAATACCTCCACAACTGCAAGGAACCGCGTTGAACGATCCATCTTCTTCGGTTGATGGTCAACAATTGCCAGTCACGCCTCGAAGTACGGAACTAAATCATCTCTATCTGCAGAGCAATGTCCAAGATCAGTTTGTAGCACTTGGTTCTTCTCAAAGAATTCATGAAAAGTATGTTACAATGTTTGTATTCAAGCCTTTATCAAGAACTAGGTGATGTCCATACTCTTCTTCCTCCCTCCACATTTTCATTTTCGAACCCGAAATTGAGTAAAACAATCTCAGTATTGCTCGAAAAGTTGCCTTCCTTGTAAGTTCTGTAGGTTGGGAAGAGTTATGTAGCTAAAACGAGATTCTTTCACGCTGGGCATCATTAATTCAATTGATATTTACTCTGG

Coding sequence (CDS)

ATGGCAGCTCTGGAGATGTCTCTTTTGAAGATCTACATCGAGCACATTGCTGTCAGGATGGGCCAAGGAAAGAAGCAGACTCATGTAAGCACATTGCTCCACCGAGTGGCGGTGTCAACTGTCAGCTTCTTCAATTTGACGATGTCAACATTTAACCACCAAACTCTTCAAGGACGGCAGTGGATGATGGACAAGGCTGAGGGTAGGAAAAATGGTGAGGCCCCCTCTGGAGTTCATAAGTTTCAAGAGAATCGTGACCAAAGGATGGACTGTACAGAGGATGCAGCACATAACGGCAACCACACATGCTCGTTTTCAGAGTCCAGAATTCAGATTTCTCCACATGGCTTAGGCTCACTTCCAGCCCTCATCTCTAATCCTCAGTACGCTACAGTGTCCTTGTCAAGTCCTGGTCTGATGCTACAACCTCAACCTCAATCTTTGCCTCAGAGTGCTGCATTCAGTGAAAATGTGTTACATGAGACAAGGACCCAAGTGAGGATCTCGTGGAATCATGGCGGCAATCAAGTAGCCATTGTTGGATCATGGGACAATTGGCAGACAAGAGAGCTTCTGCAGAACACCGGTGAGGAGTTTGTGGTTGTGAAAACTCTGCCGGTCGGTATCTACCATTACCACTTCATAGTTGATGGTTGGTTGGTTTATGCTCCAGATCTACCCTGGTTTTGTGATGATTCAGGGAATGCATACAATATATTAGACTTGCAGGGCCATGTATCTGAATTGCCTATAAGTATGTCCGAATTTGAAACTCCTCCTTCTCCGCCGTCGAGTTATGATAACCAATGCTTGAACGAAGGTGATTTCAGCAGACCTCCCCCAGAAATACCTCCACAACTGCAAGGAACCGCGTTGAACGATCCATCTTCTTCGGTTGATGGTCAACAATTGCCAGTCACGCCTCGAAGTACGGAACTAAATCATCTCTATCTGCAGAGCAATGTCCAAGATCAGTTTGTAGCACTTGGTTCTTCTCAAAGAATTCATGAAAAGTATGTTACAATGTTTGTATTCAAGCCTTTATCAAGAACTAGGTGA

Protein sequence

MAALEMSLLKIYIEHIAVRMGQGKKQTHVSTLLHRVAVSTVSFFNLTMSTFNHQTLQGRQWMMDKAEGRKNGEAPSGVHKFQENRDQRMDCTEDAAHNGNHTCSFSESRIQISPHGLGSLPALISNPQYATVSLSSPGLMLQPQPQSLPQSAAFSENVLHETRTQVRISWNHGGNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFCDDSGNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQLQGTALNDPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQRIHEKYVTMFVFKPLSRTR

Homology

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BLAST of Sed0012742 vs. NCBI nr
Match: XP_022928365.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X7 [Cucurbita moschata])

HSP 1 Score: 539.3 bits (1388), Expect = 2.5e-149
Identity = 280/359 (77.99%), Postives = 302/359 (84.12%), Query Frame = 0


Query: 1   MAALEMSLLKIYIEHIAVRMGQG-KKQTHVSTLLHRVAVSTVSFFNLTMSTFNHQTLQGR 60
           MAALEMSLLK+YIEHIAVRMGQG KKQTHV           VSF NL +STFNH TL  +
Sbjct: 1   MAALEMSLLKVYIEHIAVRMGQGKKKQTHVDA----PPGGGVSFSNLVISTFNHLTLNFK 60

Query: 61  QW-----MMDKAEGRKNGEAPSGVHKFQENRDQRMDCTEDAAHNGNHTCSFSESRIQISP 120
           +      +MD AEG KN +  SGVHKF+EN DQRMDCTEDA  N +HT SF++SRIQISP
Sbjct: 61  EGSRSLRLMDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISP 120

Query: 121 HGLGSLPALISNPQYATVSLSSPGLMLQPQPQSLPQS-AAFSENVLHETRTQVRISWNHG 180
             LGS       PQYATVSLSSPGLMLQPQPQS+PQS AAF ENV HETR++VRISWNHG
Sbjct: 121 QSLGS-------PQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHG 180

Query: 181 GNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFCDDS 240
           GNQVAIVGSWDNWQ+RELLQNTGE+FVVVKTLPVGIYHYHFIVDGWLVYAPDLPWF +DS
Sbjct: 181 GNQVAIVGSWDNWQSRELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDS 240

Query: 241 GNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQLQGTALN 300
           GNAYNILDL G+VSELP SM EFETPPSPPSSYDNQ  NE DF RPPPE+PPQLQGT LN
Sbjct: 241 GNAYNILDLPGYVSELPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILN 300

Query: 301 DPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQRIHEKYVTMFVFKPLSRTR 353
           DPSSSVDG+ LPVTPR+TELNHLYLQ NVQDQF+ALGSSQRIHEKY TMF+FKPLSRTR
Sbjct: 301 DPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 348

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BLAST of Sed0012742 vs. NCBI nr
Match: XP_022928361.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 539.3 bits (1388), Expect = 2.5e-149
Identity = 280/359 (77.99%), Postives = 302/359 (84.12%), Query Frame = 0


Query: 1   MAALEMSLLKIYIEHIAVRMGQG-KKQTHVSTLLHRVAVSTVSFFNLTMSTFNHQTLQGR 60
           MAALEMSLLK+YIEHIAVRMGQG KKQTHV           VSF NL +STFNH TL  +
Sbjct: 1   MAALEMSLLKVYIEHIAVRMGQGKKKQTHVDA----PPGGGVSFSNLVISTFNHLTLNFK 60

Query: 61  QW-----MMDKAEGRKNGEAPSGVHKFQENRDQRMDCTEDAAHNGNHTCSFSESRIQISP 120
           +      +MD AEG KN +  SGVHKF+EN DQRMDCTEDA  N +HT SF++SRIQISP
Sbjct: 61  EGSRSLRLMDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISP 120

Query: 121 HGLGSLPALISNPQYATVSLSSPGLMLQPQPQSLPQS-AAFSENVLHETRTQVRISWNHG 180
             LGS       PQYATVSLSSPGLMLQPQPQS+PQS AAF ENV HETR++VRISWNHG
Sbjct: 121 QSLGS-------PQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHG 180

Query: 181 GNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFCDDS 240
           GNQVAIVGSWDNWQ+RELLQNTGE+FVVVKTLPVGIYHYHFIVDGWLVYAPDLPWF +DS
Sbjct: 181 GNQVAIVGSWDNWQSRELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDS 240

Query: 241 GNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQLQGTALN 300
           GNAYNILDL G+VSELP SM EFETPPSPPSSYDNQ  NE DF RPPPE+PPQLQGT LN
Sbjct: 241 GNAYNILDLPGYVSELPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILN 300

Query: 301 DPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQRIHEKYVTMFVFKPLSRTR 353
           DPSSSVDG+ LPVTPR+TELNHLYLQ NVQDQF+ALGSSQRIHEKY TMF+FKPLSRTR
Sbjct: 301 DPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 348

[Close]

BLAST of Sed0012742 vs. NCBI nr
Match: XP_022928364.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X6 [Cucurbita moschata])

HSP 1 Score: 537.7 bits (1384), Expect = 7.4e-149
Identity = 279/358 (77.93%), Postives = 301/358 (84.08%), Query Frame = 0


Query: 1   MAALEMSLLKIYIEHIAVRMGQG-KKQTHVSTLLHRVAVSTVSFFNLTMSTFNHQTLQGR 60
           MAALEMSLLK+YIEHIAVRMGQG KKQTHV           VSF NL +STFNH TL  +
Sbjct: 1   MAALEMSLLKVYIEHIAVRMGQGKKKQTHVDA----PPGGGVSFSNLVISTFNHLTLNFK 60

Query: 61  QW-----MMDKAEGRKNGEAPSGVHKFQENRDQRMDCTEDAAHNGNHTCSFSESRIQISP 120
           +      +MD AEG KN +  SGVHKF+EN DQRMDCTEDA  N +HT SF++SRIQISP
Sbjct: 61  EGSRSLRLMDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISP 120

Query: 121 HGLGSLPALISNPQYATVSLSSPGLMLQPQPQSLPQS-AAFSENVLHETRTQVRISWNHG 180
             LGS       PQYATVSLSSPGLMLQPQPQS+PQS AAF ENV HETR++VRISWNHG
Sbjct: 121 QSLGS-------PQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHG 180

Query: 181 GNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFCDDS 240
           GNQVAIVGSWDNWQ+RELLQNTGE+FVVVKTLPVGIYHYHFIVDGWLVYAPDLPWF +DS
Sbjct: 181 GNQVAIVGSWDNWQSRELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDS 240

Query: 241 GNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQLQGTALN 300
           GNAYNILDL G+VSELP SM EFETPPSPPSSYDNQ  NE DF RPPPE+PPQLQGT LN
Sbjct: 241 GNAYNILDLPGYVSELPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILN 300

Query: 301 DPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQRIHEKYVTMFVFKPLSRT 352
           DPSSSVDG+ LPVTPR+TELNHLYLQ NVQDQF+ALGSSQRIHEKY TMF+FKPLSRT
Sbjct: 301 DPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRT 347

[Close]

BLAST of Sed0012742 vs. NCBI nr
Match: XP_022928358.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 537.7 bits (1384), Expect = 7.4e-149
Identity = 279/358 (77.93%), Postives = 301/358 (84.08%), Query Frame = 0


Query: 1   MAALEMSLLKIYIEHIAVRMGQG-KKQTHVSTLLHRVAVSTVSFFNLTMSTFNHQTLQGR 60
           MAALEMSLLK+YIEHIAVRMGQG KKQTHV           VSF NL +STFNH TL  +
Sbjct: 1   MAALEMSLLKVYIEHIAVRMGQGKKKQTHVDA----PPGGGVSFSNLVISTFNHLTLNFK 60

Query: 61  QW-----MMDKAEGRKNGEAPSGVHKFQENRDQRMDCTEDAAHNGNHTCSFSESRIQISP 120
           +      +MD AEG KN +  SGVHKF+EN DQRMDCTEDA  N +HT SF++SRIQISP
Sbjct: 61  EGSRSLRLMDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISP 120

Query: 121 HGLGSLPALISNPQYATVSLSSPGLMLQPQPQSLPQS-AAFSENVLHETRTQVRISWNHG 180
             LGS       PQYATVSLSSPGLMLQPQPQS+PQS AAF ENV HETR++VRISWNHG
Sbjct: 121 QSLGS-------PQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHG 180

Query: 181 GNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFCDDS 240
           GNQVAIVGSWDNWQ+RELLQNTGE+FVVVKTLPVGIYHYHFIVDGWLVYAPDLPWF +DS
Sbjct: 181 GNQVAIVGSWDNWQSRELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDS 240

Query: 241 GNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQLQGTALN 300
           GNAYNILDL G+VSELP SM EFETPPSPPSSYDNQ  NE DF RPPPE+PPQLQGT LN
Sbjct: 241 GNAYNILDLPGYVSELPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILN 300

Query: 301 DPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQRIHEKYVTMFVFKPLSRT 352
           DPSSSVDG+ LPVTPR+TELNHLYLQ NVQDQF+ALGSSQRIHEKY TMF+FKPLSRT
Sbjct: 301 DPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRT 347

[Close]

BLAST of Sed0012742 vs. NCBI nr
Match: XP_022928360.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 534.6 bits (1376), Expect = 6.2e-148
Identity = 277/356 (77.81%), Postives = 299/356 (83.99%), Query Frame = 0


Query: 4   LEMSLLKIYIEHIAVRMGQG-KKQTHVSTLLHRVAVSTVSFFNLTMSTFNHQTLQGRQW- 63
           LEMSLLK+YIEHIAVRMGQG KKQTHV           VSF NL +STFNH TL  ++  
Sbjct: 11  LEMSLLKVYIEHIAVRMGQGKKKQTHVDA----PPGGGVSFSNLVISTFNHLTLNFKEGS 70

Query: 64  ----MMDKAEGRKNGEAPSGVHKFQENRDQRMDCTEDAAHNGNHTCSFSESRIQISPHGL 123
               +MD AEG KN +  SGVHKF+EN DQRMDCTEDA  N +HT SF++SRIQISP  L
Sbjct: 71  RSLRLMDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSL 130

Query: 124 GSLPALISNPQYATVSLSSPGLMLQPQPQSLPQS-AAFSENVLHETRTQVRISWNHGGNQ 183
           GS       PQYATVSLSSPGLMLQPQPQS+PQS AAF ENV HETR++VRISWNHGGNQ
Sbjct: 131 GS-------PQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQ 190

Query: 184 VAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFCDDSGNA 243
           VAIVGSWDNWQ+RELLQNTGE+FVVVKTLPVGIYHYHFIVDGWLVYAPDLPWF +DSGNA
Sbjct: 191 VAIVGSWDNWQSRELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDSGNA 250

Query: 244 YNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQLQGTALNDPS 303
           YNILDL G+VSELP SM EFETPPSPPSSYDNQ  NE DF RPPPE+PPQLQGT LNDPS
Sbjct: 251 YNILDLPGYVSELPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILNDPS 310

Query: 304 SSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQRIHEKYVTMFVFKPLSRTR 353
           SSVDG+ LPVTPR+TELNHLYLQ NVQDQF+ALGSSQRIHEKY TMF+FKPLSRTR
Sbjct: 311 SSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 355

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BLAST of Sed0012742 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-46
Identity = 113/282 (40.07%), Postives = 154/282 (54.61%), Query Frame = 0


Query: 73  EAPSGVHKFQENRDQRMDCTE--DAAHNGNHTCSFSESRIQISPHG-LGSLPALISNPQY 132
           EA S      E+ D  +   E   AA +GNH     E   Q  PH    +   L+  PQ 
Sbjct: 9   EANSNNASAVEDEDAEICSREAMSAASDGNHVAP-PELMGQSPPHSPRATQSPLMFAPQV 68

Query: 133 ATVSLSSPGLMLQPQPQSLPQSAAFSENVLHETRTQVRISWNHGGNQVAIVGSWDNWQTR 192
             + L  P  +  P P  +   ++  E   +E      I+W HGG ++A+ GSWDNW+TR
Sbjct: 69  PVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTR 128

Query: 193 ELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFCDDSGNAYNILDLQGHVSEL 252
             LQ +G++F ++K LP G+Y Y FIVDG   +AP+LP   DD+GN +NILDLQ +V E 
Sbjct: 129 SRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPED 188

Query: 253 PISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQLQGTALNDPSSSVDGQQLPVTPR 312
             S+S FE P SP +SY N  L   D+S+ PP +PP LQ T LN P+++ D       P+
Sbjct: 189 IQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQ 248

Query: 313 STELNHLYLQSNVQ-DQFVALGSSQRIHEKYVTMFVFKPLSR 351
              LNHLY+Q        VALGS+ R   KYVT+ ++K L R
Sbjct: 249 HVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289

[Close]

BLAST of Sed0012742 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-37
Identity = 79/184 (42.93%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 168 ISWNHGGNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLP 227
           I+WN GGN VA+ GSWDNW++R+ LQ +G++  ++  LP GIYHY  IVDG   Y PDLP
Sbjct: 104 ITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLP 163

Query: 228 WFCDDSGNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQL 287
           +  D+ GN  NILD+   V E P S+ EFE PPSP  SY        D+++ P  +PPQL
Sbjct: 164 FVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQL 223

Query: 288 QGTALNDPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQ-FVALGSSQRIHEKYVTMFVFK 347
             T L     + +   +   P+   LNH++++     Q  VALG + R   KY+T+ ++K
Sbjct: 224 HLTLL----GTTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYK 283

Query: 348 PLSR 351
           PL+R
Sbjct: 284 PLTR 283

[Close]

BLAST of Sed0012742 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.4e-17
Identity = 64/194 (32.99%), Postives = 93/194 (47.94%), Query Frame = 0


Query: 168 ISWNHGGNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLP 227
           I W+ GG +V I GS++NW T+  L  +  +FV +  LP G + Y F VDG  V+ P  P
Sbjct: 81  IRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP 140

Query: 228 WFCDDSGNAYNILDLQGHVSEL-----PISMSEFET-----PPSPPSSYDNQ--CLNEGD 287
                 G   N++ ++    E+       SM   ET       SPP  Y  +       +
Sbjct: 141 VVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYAFRSEE 200

Query: 288 FSRPPPEIPPQLQGTALN-DPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQR 347
             + PP +PP L    LN D + S D   LP  P    LNHLY  S ++D  + L ++ R
Sbjct: 201 RFKSPPILPPHLLQVILNKDTNISCDPALLP-EPNHVMLNHLYALS-IKDSVMVLSATHR 260

Query: 348 IHEKYVTMFVFKPL 349
             +KYVT  ++KP+
Sbjct: 261 YKKKYVTTLLYKPI 272

[Close]

BLAST of Sed0012742 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-17
Identity = 64/194 (32.99%), Postives = 93/194 (47.94%), Query Frame = 0


Query: 168 ISWNHGGNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLP 227
           I W+ GG +V I GS++NW T+  L  +  +FV +  LP G + Y F VDG  V+ P  P
Sbjct: 80  IRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP 139

Query: 228 WFCDDSGNAYNILDLQGHVSEL-----PISMSEFET-----PPSPPSSYDNQ--CLNEGD 287
                 G   N++ ++    E+       SM   ET       SPP  Y  +       +
Sbjct: 140 VVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEE 199

Query: 288 FSRPPPEIPPQLQGTALN-DPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQR 347
             + PP +PP L    LN D + S D   LP  P    LNHLY  S ++D  + L ++ R
Sbjct: 200 RFKSPPILPPHLLQVILNKDTNISCDPALLP-EPNHVMLNHLYALS-IKDSVMVLSATHR 259

Query: 348 IHEKYVTMFVFKPL 349
             +KYVT  ++KP+
Sbjct: 260 YKKKYVTTLLYKPI 271

[Close]

BLAST of Sed0012742 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.1e-17
Identity = 64/194 (32.99%), Postives = 92/194 (47.42%), Query Frame = 0


Query: 168 ISWNHGGNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLP 227
           I W+ GG +V I GS++NW T+  L  +  +FV +  LP G + Y F VDG  V+ P  P
Sbjct: 80  IRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP 139

Query: 228 WFCDDSGNAYNILDLQGHVSEL-----PISMSEFET-----PPSPPSSYDNQ--CLNEGD 287
                 G   N++ ++    E+       SM   ET       SPP  Y  +       +
Sbjct: 140 VVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEE 199

Query: 288 FSRPPPEIPPQLQGTALN-DPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQR 347
             + PP +PP L    LN D + S D   LP  P    LNHLY  S  +D  + L ++ R
Sbjct: 200 RFKSPPILPPHLLQVILNKDTNISCDPALLP-EPNHVMLNHLYALS-TKDSVMVLSATHR 259

Query: 348 IHEKYVTMFVFKPL 349
             +KYVT  ++KP+
Sbjct: 260 YKKKYVTTLLYKPI 271

[Close]

BLAST of Sed0012742 vs. ExPASy TrEMBL
Match: A0A6J1ERI1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X7 OS=Cucurbita moschata OX=3662 GN=LOC111435212 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.2e-149
Identity = 280/359 (77.99%), Postives = 302/359 (84.12%), Query Frame = 0


Query: 1   MAALEMSLLKIYIEHIAVRMGQG-KKQTHVSTLLHRVAVSTVSFFNLTMSTFNHQTLQGR 60
           MAALEMSLLK+YIEHIAVRMGQG KKQTHV           VSF NL +STFNH TL  +
Sbjct: 1   MAALEMSLLKVYIEHIAVRMGQGKKKQTHVDA----PPGGGVSFSNLVISTFNHLTLNFK 60

Query: 61  QW-----MMDKAEGRKNGEAPSGVHKFQENRDQRMDCTEDAAHNGNHTCSFSESRIQISP 120
           +      +MD AEG KN +  SGVHKF+EN DQRMDCTEDA  N +HT SF++SRIQISP
Sbjct: 61  EGSRSLRLMDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISP 120

Query: 121 HGLGSLPALISNPQYATVSLSSPGLMLQPQPQSLPQS-AAFSENVLHETRTQVRISWNHG 180
             LGS       PQYATVSLSSPGLMLQPQPQS+PQS AAF ENV HETR++VRISWNHG
Sbjct: 121 QSLGS-------PQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHG 180

Query: 181 GNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFCDDS 240
           GNQVAIVGSWDNWQ+RELLQNTGE+FVVVKTLPVGIYHYHFIVDGWLVYAPDLPWF +DS
Sbjct: 181 GNQVAIVGSWDNWQSRELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDS 240

Query: 241 GNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQLQGTALN 300
           GNAYNILDL G+VSELP SM EFETPPSPPSSYDNQ  NE DF RPPPE+PPQLQGT LN
Sbjct: 241 GNAYNILDLPGYVSELPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILN 300

Query: 301 DPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQRIHEKYVTMFVFKPLSRTR 353
           DPSSSVDG+ LPVTPR+TELNHLYLQ NVQDQF+ALGSSQRIHEKY TMF+FKPLSRTR
Sbjct: 301 DPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 348

[Close]

BLAST of Sed0012742 vs. ExPASy TrEMBL
Match: A0A6J1EK37 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111435212 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.2e-149
Identity = 280/359 (77.99%), Postives = 302/359 (84.12%), Query Frame = 0


Query: 1   MAALEMSLLKIYIEHIAVRMGQG-KKQTHVSTLLHRVAVSTVSFFNLTMSTFNHQTLQGR 60
           MAALEMSLLK+YIEHIAVRMGQG KKQTHV           VSF NL +STFNH TL  +
Sbjct: 1   MAALEMSLLKVYIEHIAVRMGQGKKKQTHVDA----PPGGGVSFSNLVISTFNHLTLNFK 60

Query: 61  QW-----MMDKAEGRKNGEAPSGVHKFQENRDQRMDCTEDAAHNGNHTCSFSESRIQISP 120
           +      +MD AEG KN +  SGVHKF+EN DQRMDCTEDA  N +HT SF++SRIQISP
Sbjct: 61  EGSRSLRLMDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISP 120

Query: 121 HGLGSLPALISNPQYATVSLSSPGLMLQPQPQSLPQS-AAFSENVLHETRTQVRISWNHG 180
             LGS       PQYATVSLSSPGLMLQPQPQS+PQS AAF ENV HETR++VRISWNHG
Sbjct: 121 QSLGS-------PQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHG 180

Query: 181 GNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFCDDS 240
           GNQVAIVGSWDNWQ+RELLQNTGE+FVVVKTLPVGIYHYHFIVDGWLVYAPDLPWF +DS
Sbjct: 181 GNQVAIVGSWDNWQSRELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDS 240

Query: 241 GNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQLQGTALN 300
           GNAYNILDL G+VSELP SM EFETPPSPPSSYDNQ  NE DF RPPPE+PPQLQGT LN
Sbjct: 241 GNAYNILDLPGYVSELPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILN 300

Query: 301 DPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQRIHEKYVTMFVFKPLSRTR 353
           DPSSSVDG+ LPVTPR+TELNHLYLQ NVQDQF+ALGSSQRIHEKY TMF+FKPLSRTR
Sbjct: 301 DPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 348

[Close]

BLAST of Sed0012742 vs. ExPASy TrEMBL
Match: A0A6J1ENS9 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435212 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.6e-149
Identity = 279/358 (77.93%), Postives = 301/358 (84.08%), Query Frame = 0


Query: 1   MAALEMSLLKIYIEHIAVRMGQG-KKQTHVSTLLHRVAVSTVSFFNLTMSTFNHQTLQGR 60
           MAALEMSLLK+YIEHIAVRMGQG KKQTHV           VSF NL +STFNH TL  +
Sbjct: 1   MAALEMSLLKVYIEHIAVRMGQGKKKQTHVDA----PPGGGVSFSNLVISTFNHLTLNFK 60

Query: 61  QW-----MMDKAEGRKNGEAPSGVHKFQENRDQRMDCTEDAAHNGNHTCSFSESRIQISP 120
           +      +MD AEG KN +  SGVHKF+EN DQRMDCTEDA  N +HT SF++SRIQISP
Sbjct: 61  EGSRSLRLMDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISP 120

Query: 121 HGLGSLPALISNPQYATVSLSSPGLMLQPQPQSLPQS-AAFSENVLHETRTQVRISWNHG 180
             LGS       PQYATVSLSSPGLMLQPQPQS+PQS AAF ENV HETR++VRISWNHG
Sbjct: 121 QSLGS-------PQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHG 180

Query: 181 GNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFCDDS 240
           GNQVAIVGSWDNWQ+RELLQNTGE+FVVVKTLPVGIYHYHFIVDGWLVYAPDLPWF +DS
Sbjct: 181 GNQVAIVGSWDNWQSRELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDS 240

Query: 241 GNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQLQGTALN 300
           GNAYNILDL G+VSELP SM EFETPPSPPSSYDNQ  NE DF RPPPE+PPQLQGT LN
Sbjct: 241 GNAYNILDLPGYVSELPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILN 300

Query: 301 DPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQRIHEKYVTMFVFKPLSRT 352
           DPSSSVDG+ LPVTPR+TELNHLYLQ NVQDQF+ALGSSQRIHEKY TMF+FKPLSRT
Sbjct: 301 DPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRT 347

[Close]

BLAST of Sed0012742 vs. ExPASy TrEMBL
Match: A0A6J1EKM3 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111435212 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.6e-149
Identity = 279/358 (77.93%), Postives = 301/358 (84.08%), Query Frame = 0


Query: 1   MAALEMSLLKIYIEHIAVRMGQG-KKQTHVSTLLHRVAVSTVSFFNLTMSTFNHQTLQGR 60
           MAALEMSLLK+YIEHIAVRMGQG KKQTHV           VSF NL +STFNH TL  +
Sbjct: 1   MAALEMSLLKVYIEHIAVRMGQGKKKQTHVDA----PPGGGVSFSNLVISTFNHLTLNFK 60

Query: 61  QW-----MMDKAEGRKNGEAPSGVHKFQENRDQRMDCTEDAAHNGNHTCSFSESRIQISP 120
           +      +MD AEG KN +  SGVHKF+EN DQRMDCTEDA  N +HT SF++SRIQISP
Sbjct: 61  EGSRSLRLMDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISP 120

Query: 121 HGLGSLPALISNPQYATVSLSSPGLMLQPQPQSLPQS-AAFSENVLHETRTQVRISWNHG 180
             LGS       PQYATVSLSSPGLMLQPQPQS+PQS AAF ENV HETR++VRISWNHG
Sbjct: 121 QSLGS-------PQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHG 180

Query: 181 GNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFCDDS 240
           GNQVAIVGSWDNWQ+RELLQNTGE+FVVVKTLPVGIYHYHFIVDGWLVYAPDLPWF +DS
Sbjct: 181 GNQVAIVGSWDNWQSRELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDS 240

Query: 241 GNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQLQGTALN 300
           GNAYNILDL G+VSELP SM EFETPPSPPSSYDNQ  NE DF RPPPE+PPQLQGT LN
Sbjct: 241 GNAYNILDLPGYVSELPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILN 300

Query: 301 DPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQRIHEKYVTMFVFKPLSRT 352
           DPSSSVDG+ LPVTPR+TELNHLYLQ NVQDQF+ALGSSQRIHEKY TMF+FKPLSRT
Sbjct: 301 DPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRT 347

[Close]

BLAST of Sed0012742 vs. ExPASy TrEMBL
Match: A0A6J1ERH6 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435212 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 3.0e-148
Identity = 277/356 (77.81%), Postives = 299/356 (83.99%), Query Frame = 0


Query: 4   LEMSLLKIYIEHIAVRMGQG-KKQTHVSTLLHRVAVSTVSFFNLTMSTFNHQTLQGRQW- 63
           LEMSLLK+YIEHIAVRMGQG KKQTHV           VSF NL +STFNH TL  ++  
Sbjct: 11  LEMSLLKVYIEHIAVRMGQGKKKQTHVDA----PPGGGVSFSNLVISTFNHLTLNFKEGS 70

Query: 64  ----MMDKAEGRKNGEAPSGVHKFQENRDQRMDCTEDAAHNGNHTCSFSESRIQISPHGL 123
               +MD AEG KN +  SGVHKF+EN DQRMDCTEDA  N +HT SF++SRIQISP  L
Sbjct: 71  RSLRLMDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSL 130

Query: 124 GSLPALISNPQYATVSLSSPGLMLQPQPQSLPQS-AAFSENVLHETRTQVRISWNHGGNQ 183
           GS       PQYATVSLSSPGLMLQPQPQS+PQS AAF ENV HETR++VRISWNHGGNQ
Sbjct: 131 GS-------PQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQ 190

Query: 184 VAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFCDDSGNA 243
           VAIVGSWDNWQ+RELLQNTGE+FVVVKTLPVGIYHYHFIVDGWLVYAPDLPWF +DSGNA
Sbjct: 191 VAIVGSWDNWQSRELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDSGNA 250

Query: 244 YNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQLQGTALNDPS 303
           YNILDL G+VSELP SM EFETPPSPPSSYDNQ  NE DF RPPPE+PPQLQGT LNDPS
Sbjct: 251 YNILDLPGYVSELPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILNDPS 310

Query: 304 SSVDGQQLPVTPRSTELNHLYLQSNVQDQFVALGSSQRIHEKYVTMFVFKPLSRTR 353
           SSVDG+ LPVTPR+TELNHLYLQ NVQDQF+ALGSSQRIHEKY TMF+FKPLSRTR
Sbjct: 311 SSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 355

[Close]

BLAST of Sed0012742 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 189.1 bits (479), Expect = 6.0e-48
Identity = 107/258 (41.47%), Postives = 146/258 (56.59%), Query Frame = 0


Query: 95  AAHNGNHTCSFSESRIQISPHG-LGSLPALISNPQYATVSLSSPGLMLQPQPQSLPQSAA 154
           AA +GNH     E   Q  PH    +   L+  PQ   + L  P  +  P P  +   ++
Sbjct: 3   AASDGNHVAP-PELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSS 62

Query: 155 FSENVLHETRTQVRISWNHGGNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYH 214
             E   +E      I+W HGG ++A+ GSWDNW+TR  LQ +G++F ++K LP G+Y Y 
Sbjct: 63  LYEEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYR 122

Query: 215 FIVDGWLVYAPDLPWFCDDSGNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNE 274
           FIVDG   +AP+LP   DD+GN +NILDLQ +V E   S+S FE P SP +SY N  L  
Sbjct: 123 FIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGA 182

Query: 275 GDFSRPPPEIPPQLQGTALNDPSSSVDGQQLPVTPRSTELNHLYLQSNVQ-DQFVALGSS 334
            D+S+ PP +PP LQ T LN P+++ D       P+   LNHLY+Q        VALGS+
Sbjct: 183 EDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGST 242

Query: 335 QRIHEKYVTMFVFKPLSR 351
            R   KYVT+ ++K L R
Sbjct: 243 HRFLAKYVTVVLYKSLQR 259

[Close]

BLAST of Sed0012742 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 189.1 bits (479), Expect = 6.0e-48
Identity = 107/258 (41.47%), Postives = 146/258 (56.59%), Query Frame = 0


Query: 95  AAHNGNHTCSFSESRIQISPHG-LGSLPALISNPQYATVSLSSPGLMLQPQPQSLPQSAA 154
           AA +GNH     E   Q  PH    +   L+  PQ   + L  P  +  P P  +   ++
Sbjct: 5   AASDGNHVAP-PELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSS 64

Query: 155 FSENVLHETRTQVRISWNHGGNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYH 214
             E   +E      I+W HGG ++A+ GSWDNW+TR  LQ +G++F ++K LP G+Y Y 
Sbjct: 65  LYEEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYR 124

Query: 215 FIVDGWLVYAPDLPWFCDDSGNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNE 274
           FIVDG   +AP+LP   DD+GN +NILDLQ +V E   S+S FE P SP +SY N  L  
Sbjct: 125 FIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGA 184

Query: 275 GDFSRPPPEIPPQLQGTALNDPSSSVDGQQLPVTPRSTELNHLYLQSNVQ-DQFVALGSS 334
            D+S+ PP +PP LQ T LN P+++ D       P+   LNHLY+Q        VALGS+
Sbjct: 185 EDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGST 244

Query: 335 QRIHEKYVTMFVFKPLSR 351
            R   KYVT+ ++K L R
Sbjct: 245 HRFLAKYVTVVLYKSLQR 261

[Close]

BLAST of Sed0012742 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 183.0 bits (463), Expect = 4.3e-46
Identity = 106/258 (41.09%), Postives = 145/258 (56.20%), Query Frame = 0


Query: 95  AAHNGNHTCSFSESRIQISPHG-LGSLPALISNPQYATVSLSSPGLMLQPQPQSLPQSAA 154
           AA +GNH     E   Q  PH    +   L+  PQ   + L  P  +  P P  +   ++
Sbjct: 3   AASDGNHVAP-PELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSS 62

Query: 155 FSENVLHETRTQVRISWNHGGNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYH 214
             E   +E      I+W HGG ++A+ GSWDNW+T   LQ +G++F ++K LP G+Y Y 
Sbjct: 63  LYEEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTSR-LQRSGKDFTIMKVLPSGVYEYR 122

Query: 215 FIVDGWLVYAPDLPWFCDDSGNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNE 274
           FIVDG   +AP+LP   DD+GN +NILDLQ +V E   S+S FE P SP +SY N  L  
Sbjct: 123 FIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGA 182

Query: 275 GDFSRPPPEIPPQLQGTALNDPSSSVDGQQLPVTPRSTELNHLYLQSNVQ-DQFVALGSS 334
            D+S+ PP +PP LQ T LN P+++ D       P+   LNHLY+Q        VALGS+
Sbjct: 183 EDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGST 242

Query: 335 QRIHEKYVTMFVFKPLSR 351
            R   KYVT+ ++K L R
Sbjct: 243 HRFLAKYVTVVLYKSLQR 258

[Close]

BLAST of Sed0012742 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 158.7 bits (400), Expect = 8.7e-39
Identity = 79/184 (42.93%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 168 ISWNHGGNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLP 227
           I+WN GGN VA+ GSWDNW++R+ LQ +G++  ++  LP GIYHY  IVDG   Y PDLP
Sbjct: 104 ITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLP 163

Query: 228 WFCDDSGNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQL 287
           +  D+ GN  NILD+   V E P S+ EFE PPSP  SY        D+++ P  +PPQL
Sbjct: 164 FVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQL 223

Query: 288 QGTALNDPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQ-FVALGSSQRIHEKYVTMFVFK 347
             T L     + +   +   P+   LNH++++     Q  VALG + R   KY+T+ ++K
Sbjct: 224 HLTLL----GTTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYK 283

Query: 348 PLSR 351
           PL+R
Sbjct: 284 PLTR 283

[Close]

BLAST of Sed0012742 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 158.7 bits (400), Expect = 8.7e-39
Identity = 79/184 (42.93%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 168 ISWNHGGNQVAIVGSWDNWQTRELLQNTGEEFVVVKTLPVGIYHYHFIVDGWLVYAPDLP 227
           I+WN GGN VA+ GSWDNW++R+ LQ +G++  ++  LP GIYHY  IVDG   Y PDLP
Sbjct: 141 ITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLP 200

Query: 228 WFCDDSGNAYNILDLQGHVSELPISMSEFETPPSPPSSYDNQCLNEGDFSRPPPEIPPQL 287
           +  D+ GN  NILD+   V E P S+ EFE PPSP  SY        D+++ P  +PPQL
Sbjct: 201 FVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQL 260

Query: 288 QGTALNDPSSSVDGQQLPVTPRSTELNHLYLQSNVQDQ-FVALGSSQRIHEKYVTMFVFK 347
             T L     + +   +   P+   LNH++++     Q  VALG + R   KY+T+ ++K
Sbjct: 261 HLTLL----GTTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYK 320

Query: 348 PLSR 351
           PL+R
Sbjct: 321 PLTR 320

The following BLAST results are available for this feature:

BLAST of Sed0012742 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928365.1	2.5e-149	77.99	SNF1-related protein kinase regulatory subunit beta-2-like isoform X7 [Cucurbita...	[more]
XP_022928361.1	2.5e-149	77.99	SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 [Cucurbita...	[more]
XP_022928364.1	7.4e-149	77.93	SNF1-related protein kinase regulatory subunit beta-2-like isoform X6 [Cucurbita...	[more]
XP_022928358.1	7.4e-149	77.93	SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Cucurbita...	[more]
XP_022928360.1	6.2e-148	77.81	SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 [Cucurbita...	[more]

BLAST of Sed0012742 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCY5	1.4e-46	40.07	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
Q84VQ1	1.2e-37	42.93	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
O43741	1.4e-17	32.99	5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2...	[more]
Q6PAM0	1.8e-17	32.99	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab...	[more]
Q9QZH4	4.1e-17	32.99	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=...	[more]

BLAST of Sed0012742 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERI1	1.2e-149	77.99	SNF1-related protein kinase regulatory subunit beta-2-like isoform X7 OS=Cucurbi...	[more]
A0A6J1EK37	1.2e-149	77.99	SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 OS=Cucurbi...	[more]
A0A6J1ENS9	3.6e-149	77.93	SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 OS=Cucurbi...	[more]
A0A6J1EKM3	3.6e-149	77.93	SNF1-related protein kinase regulatory subunit beta-2-like isoform X6 OS=Cucurbi...	[more]
A0A6J1ERH6	3.0e-148	77.81	SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 OS=Cucurbi...	[more]

BLAST of Sed0012742 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16360.1	6.0e-48	41.47	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	6.0e-48	41.47	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.2	4.3e-46	41.09	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.1	8.7e-39	42.93	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	8.7e-39	42.93	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006828	Association with the SNF1 complex (ASC) domain	SMART	SM01010	AMPKBI_2	coord: 259..348 e-value: 6.8E-9 score: 45.6
IPR006828	Association with the SNF1 complex (ASC) domain	PFAM	PF04739	AMPKBI	coord: 278..347 e-value: 3.4E-13 score: 49.7
None	No IPR available	GENE3D	6.20.250.60		coord: 252..348 e-value: 7.5E-19 score: 69.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..306
None	No IPR available	PANTHER	PTHR46316:SF6	SNF1-RELATED KINASE REGULATORY SUBUNIT BETA-2	coord: 63..351
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 166..241 e-value: 5.84899E-19 score: 78.4096
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 157..246 e-value: 1.1E-19 score: 72.0
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 165..243 e-value: 2.2E-23 score: 82.2
IPR043554	SNF1-related protein kinase regulatory subunit beta	PANTHER	PTHR46316	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 63..351
IPR037256	ASC domain superfamily	SUPERFAMILY	160219	AMPKBI-like	coord: 247..348
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 164..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012742.1	Sed0012742.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding