Sed0012636 (gene) Chayote v1

Overview
NameSed0012636
Typegene
OrganismSechium edule (Chayote v1)
Descriptionsuccinate dehydrogenase subunit 5, mitochondrial-like
LocationLG10: 28438339 .. 28440707 (-)
RNA-Seq ExpressionSed0012636
SyntenySed0012636
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAATGGGGATTCTCCGATCACTATTGCGATCTGTCCGCACCAGATCTATCGGCGTCGCCGGAACTGGTCACCGGAATTTACTGCAAACTCATCACCAGCCTGCTCGAAATTTCTCCTATCTCTCCTCTCCTCGTTCGTCTTTCTCAGCTTTTCCGCACAGACTTTCTTCTGGTACGCCTAATTACTTATACCTATTTCCTATTATGTATAGATTTAAATATGAATAGGAGTTTCCGGCTAAGTTTCTATTCTTCACTGAACTTATTTGATGATGGTTGATTCGTTTGTGTGTTACTGTTCTTACCTATATGTATGGTTCTTCTTCCGATTCAAGTTTTTGATTGCTGCATCTGTAGGGTAAATACTTACATTCTTTTCTATATTAGTGTTTTTCGTGAGGTCGACTGAGTATTAGATGGTGTGGCATCCATTGTTGACCTATCTTATAAATTGTTAGGATCTCTCTTCACTTTTTAACGTGTGATCCTTAACATGACTCCTCAAGATCTCAATTTCATTTATTGGACTGAATACCCGTTTAGATTTAATGGGATCATATTAGATAGTGTTGGCATTCGTGGTTTTGAGATGATAGGAGTAGCCCTCTTATCTTTTAGATTGCTAGGAGGTTTCCATACTTTTCAATGTGGGATCCTCAACGCCGAGCGACAACAAGCCTTTCACTATCTGCAATTTGTAGATAATTTGTTGACTTGTGAAATGCCCAATTTATTCAACAATACGTTCTTCTTTAAGAATTGGAAAGAAATCAATCTCGTTTTAGAGAGCAAAAAATATCCACTGGAGTTTTAAGTCATTTACCTTTGCAAAAACTGAATTTCATTCCTGATAGCAAATGTATAATTTGATTATTTCACCAACAAGTACAGTTGTTCAGTGGCATTAGTGTATACCCAATAACCAATATCGAATCCCCCACCCCCAATTTGTGTAATCTATAAAAAAAAAGTGGTTATTTCGTAAAAGGTAAGATAAATAGGGGGTAGGTAAAAGTTTAAACATACTATGTGCGTGTGTGAACCATGTAGACATATTTAATTCAATTCTTTTTTCGGTATCATAATGTTTAAACTGATATCATATTCCTGTTTTTCTGGCAAATTTGTGCAGAATGTGGCTATCTATCTGGTGTGGGGCACGCTAGATTTTTTAGCGTTGATGTTGTTCATATGCCTACAATTGAAGATTCCAAGCTTCAAAGGGCTTTCAAGGATTTGATGGCTGCAAGTTGGGATAATCTTCCTGAGCCTGCTGTCTATGATGTAAAGACAGCATTATCCGGAAGCACAGACGACAAGGTTGGAAAGGAAATTGTGGAAAATGTTTTTCGAGTAGCTGAAGCAGTTGAGGATTTTGGTGATATACTTACCAACTTGAGAATGGAAATTGATGATTCCATTGGTCTCACTGGCGAGGTATTGGAAATTATTGGTTTATAAAATTAAATTATTTTCTTCTCCAGTTTTTTAAGTAAAAACTTCTGAGTTCATCTGCAGGCTGCTTCGCCTATGTCCCATGAGATTTCGGATGCACTGGACACAGTTCTTGATCGCTATATAGCCTACTTGGATGCATTTGGTCCTGAGGAAAACTATCTGCGGAAGAAAGTGGAAATAGAGTTGGGAACAAAGATGTTGCATTTGAAAATGAGATGCTATAGCCTTGGACCACAGTGGTCAAAGGTATACAAATTCTGCAATTTAGTTCTTTAATTGATATTATTTTGAATGTTTAAGTTGGTGAAATAAGTAATAGCTCATTTGGCAGTTGCCACCATAGAAATGCTATGTCCTGATCCAGTTATTATAGTCTTAGATTCCTTACACCATGGAAGTCTAAAAGAGTGGAGTTCTTAAATCACAATATGTTAATTTTAAACTGGAAAGGAAGCTTACATGGGAAACCCTGGGCTATGACTTCTACAGCTCGTTCTTGTTTACTGCTTCTAGCACGGCAGATTAATATTGTTCAGCTGCAACAATTGGGTTCCATCCTTGCTTTGGAAAGAGTCCATGCTTATGTTCTTCTAGTAAATCTGTTGAATTATGTTAAACTACCAATCAATCCAAAAGCCTAAGCTGATGGATTGGGGTAAATTTAATTATATCAACCAACACTCCTCCTCACTTGTAGGCTTTGAAATTTGAGAAATGCCCTACAAGTGGAATTTAATTTTAATTGGAGAGGAAACGACTTGGATGGGATTCGAACTTATGACCTCCTGCTCTGATATTATGTTGAATTTGGTTTTGTTAACCATGTCTTCCTTTTTCTTTTCTGACAGATTTCTGTGCTGGGAACCTCTGGTCTATCAGGCTCATATGTCGAGCAAAGGGCATAA

mRNA sequence

ATGGAGAAAATGGGGATTCTCCGATCACTATTGCGATCTGTCCGCACCAGATCTATCGGCGTCGCCGGAACTGGTCACCGGAATTTACTGCAAACTCATCACCAGCCTGCTCGAAATTTCTCCTATCTCTCCTCTCCTCGTTCGTCTTTCTCAGCTTTTCCGCACAGACTTTCTTCTGAATGTGGCTATCTATCTGGTGTGGGGCACGCTAGATTTTTTAGCGTTGATGTTGTTCATATGCCTACAATTGAAGATTCCAAGCTTCAAAGGGCTTTCAAGGATTTGATGGCTGCAAGTTGGGATAATCTTCCTGAGCCTGCTGTCTATGATGTAAAGACAGCATTATCCGGAAGCACAGACGACAAGGTTGGAAAGGAAATTGTGGAAAATGTTTTTCGAGTAGCTGAAGCAGTTGAGGATTTTGGTGATATACTTACCAACTTGAGAATGGAAATTGATGATTCCATTGGTCTCACTGGCGAGGCTGCTTCGCCTATGTCCCATGAGATTTCGGATGCACTGGACACAGTTCTTGATCGCTATATAGCCTACTTGGATGCATTTGGTCCTGAGGAAAACTATCTGCGGAAGAAAGTGGAAATAGAGTTGGGAACAAAGATGTTGCATTTGAAAATGAGATGCTATAGCCTTGGACCACAGTGGTCAAAGATTTCTGTGCTGGGAACCTCTGGTCTATCAGGCTCATATGTCGAGCAAAGGGCATAA

Coding sequence (CDS)

ATGGAGAAAATGGGGATTCTCCGATCACTATTGCGATCTGTCCGCACCAGATCTATCGGCGTCGCCGGAACTGGTCACCGGAATTTACTGCAAACTCATCACCAGCCTGCTCGAAATTTCTCCTATCTCTCCTCTCCTCGTTCGTCTTTCTCAGCTTTTCCGCACAGACTTTCTTCTGAATGTGGCTATCTATCTGGTGTGGGGCACGCTAGATTTTTTAGCGTTGATGTTGTTCATATGCCTACAATTGAAGATTCCAAGCTTCAAAGGGCTTTCAAGGATTTGATGGCTGCAAGTTGGGATAATCTTCCTGAGCCTGCTGTCTATGATGTAAAGACAGCATTATCCGGAAGCACAGACGACAAGGTTGGAAAGGAAATTGTGGAAAATGTTTTTCGAGTAGCTGAAGCAGTTGAGGATTTTGGTGATATACTTACCAACTTGAGAATGGAAATTGATGATTCCATTGGTCTCACTGGCGAGGCTGCTTCGCCTATGTCCCATGAGATTTCGGATGCACTGGACACAGTTCTTGATCGCTATATAGCCTACTTGGATGCATTTGGTCCTGAGGAAAACTATCTGCGGAAGAAAGTGGAAATAGAGTTGGGAACAAAGATGTTGCATTTGAAAATGAGATGCTATAGCCTTGGACCACAGTGGTCAAAGATTTCTGTGCTGGGAACCTCTGGTCTATCAGGCTCATATGTCGAGCAAAGGGCATAA

Protein sequence

MEKMGILRSLLRSVRTRSIGVAGTGHRNLLQTHHQPARNFSYLSSPRSSFSAFPHRLSSECGYLSGVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTDDKVGKEIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDRYIAYLDAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQRA
Homology
[Close]
BLAST of Sed0012636 vs. NCBI nr
Match: XP_022951155.1 (succinate dehydrogenase subunit 5, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 376.3 bits (965), Expect = 1.9e-100
Identity = 186/241 (77.18%), Postives = 210/241 (87.14%), Query Frame = 0 

Query: 1   MEKMGILRSLLRSVRTRSIGVAGTGHRNLLQTHHQPARNFSYLSSPRSSFSAFPHRLSSE 60
           MEKM +LRSLLRSVR  S  +AG  HR+LLQ+++Q ARNFSY+SSPRSSFS  P R+S +
Sbjct: 1   MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQSYYQAARNFSYISSPRSSFSDSPLRVSYD 60

Query: 61  CGYLSGVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTD 120
           CGYLSGVGHARFFSVDVVHMPTIEDSKLQ AFKDLMAASWDNLPEP VYDVK ALSGST+
Sbjct: 61  CGYLSGVGHARFFSVDVVHMPTIEDSKLQNAFKDLMAASWDNLPEPVVYDVKAALSGSTN 120

Query: 121 DKVGKEIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDR 180
           D+ GKEIVENVFR AEA E+FG ILT+L+M+IDDSIGL+GE   P+S+E+ +AL TV DR
Sbjct: 121 DEAGKEIVENVFRAAEAAEEFGGILTSLKMKIDDSIGLSGEDVKPLSNELKNALQTVHDR 180

Query: 181 YIAYLDAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQR 240
           Y AYLDAFGPEENYL+KKVE ELGTKM+HLKMRC  LG +W K+SVLGTSGLSGSYVEQR
Sbjct: 181 YTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]
BLAST of Sed0012636 vs. NCBI nr
Match: XP_023001943.1 (succinate dehydrogenase subunit 5, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 371.3 bits (952), Expect = 6.2e-99
Identity = 184/241 (76.35%), Postives = 207/241 (85.89%), Query Frame = 0 

Query: 1   MEKMGILRSLLRSVRTRSIGVAGTGHRNLLQTHHQPARNFSYLSSPRSSFSAFPHRLSSE 60
           MEKM +LRSLLRSVR  S  +AG  HR+LLQ+H+Q ARNFS+LSSPRSSFS  P R+S +
Sbjct: 1   MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQSHYQAARNFSHLSSPRSSFSDSPQRVSYD 60

Query: 61  CGYLSGVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTD 120
           CGYLSGVGHARFFSVDV HMPTIEDSKLQ AFKDLMAASWDNLPE  VYDVK ALSGST+
Sbjct: 61  CGYLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVALSGSTN 120

Query: 121 DKVGKEIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDR 180
           D+ GKEIVENVFR AEA E+FG ILT+L+M+IDDSIGL+GE   P+S E+ +AL TV DR
Sbjct: 121 DEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNALQTVHDR 180

Query: 181 YIAYLDAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQR 240
           Y +YLDAFGPEENYL+KKVE ELGTKM+HLKMRC  LG +W K+SVLGTSGLSGSYVEQR
Sbjct: 181 YTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]
BLAST of Sed0012636 vs. NCBI nr
Match: XP_023537918.1 (succinate dehydrogenase subunit 5, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.8 bits (948), Expect = 1.8e-98
Identity = 183/241 (75.93%), Postives = 206/241 (85.48%), Query Frame = 0 

Query: 1   MEKMGILRSLLRSVRTRSIGVAGTGHRNLLQTHHQPARNFSYLSSPRSSFSAFPHRLSSE 60
           MEKM +LRSLLRSVR  S  +AG  HR+LLQ+H+Q ARNFS LSSPRSSFS  P R+S +
Sbjct: 1   MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQSHYQAARNFSNLSSPRSSFSDSPQRVSYD 60

Query: 61  CGYLSGVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTD 120
           CGYLSG GHARFFSVDV HMPTIEDSKL+ AFKDLMAASWD+LPEP VYDVK ALSGST+
Sbjct: 61  CGYLSGAGHARFFSVDVAHMPTIEDSKLRNAFKDLMAASWDDLPEPVVYDVKAALSGSTN 120

Query: 121 DKVGKEIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDR 180
           D+ GKEIVENVFR AEA E+FG ILT+L+M+IDDSIGL+GE   P+S E+ +AL TV DR
Sbjct: 121 DEAGKEIVENVFRAAEAAEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNALQTVHDR 180

Query: 181 YIAYLDAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQR 240
           Y AYLDAFGPEENYL+KKVE ELGTKM+HLKMRC  LG +W K+SVLGTSGLSGSYVEQR
Sbjct: 181 YTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]
BLAST of Sed0012636 vs. NCBI nr
Match: KAG6598386.1 (Succinate dehydrogenase subunit 5, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.1 bits (941), Expect = 1.2e-97
Identity = 185/238 (77.73%), Postives = 202/238 (84.87%), Query Frame = 0 

Query: 4   MGILRSLLRSVRTRSIGVAGTGHRNLLQTHHQPARNFSYLSSPRSSFSAFPHRLSSECGY 63
           M ILRSLLRSVR RS  +AG  HRNLLQ+HHQ AR+F  LSS RSSFS FP R+SS+CGY
Sbjct: 1   MVILRSLLRSVRARSYVIAGVTHRNLLQSHHQAARSFFSLSSHRSSFSDFPPRVSSDCGY 60

Query: 64  LSGVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTDDKV 123
           LSGV HARFFSVDVV+MPTI D+KLQ AFKDLMAASWDNLPE  VYDVK ALSGST+DK 
Sbjct: 61  LSGVAHARFFSVDVVNMPTIGDTKLQNAFKDLMAASWDNLPESVVYDVKAALSGSTEDKA 120

Query: 124 GKEIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDRYIA 183
           GKEIVENVFR AEA EDFGDIL NL+MEIDDSIG++GE   P+S E+  AL TV DRY A
Sbjct: 121 GKEIVENVFRAAEAAEDFGDILVNLKMEIDDSIGVSGEDVKPLSDELKKALQTVYDRYTA 180

Query: 184 YLDAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQRA 242
           YLDAFGPEENYLRKKVE ELGTKM++LKMRC  LG +W K+SVLGTSGLSGSYVEQRA
Sbjct: 181 YLDAFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 238

[Close]
BLAST of Sed0012636 vs. NCBI nr
Match: XP_023546793.1 (succinate dehydrogenase subunit 5, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363.2 bits (931), Expect = 1.7e-96
Identity = 184/238 (77.31%), Postives = 201/238 (84.45%), Query Frame = 0 

Query: 4   MGILRSLLRSVRTRSIGVAGTGHRNLLQTHHQPARNFSYLSSPRSSFSAFPHRLSSECGY 63
           M ILRSLLRSVR RS  +AG  HRNLLQ+H Q AR+F  LSS RSSFS FP R+SS+CGY
Sbjct: 1   MVILRSLLRSVRARSYVIAGVTHRNLLQSHRQAARSFFSLSSHRSSFSDFPLRVSSDCGY 60

Query: 64  LSGVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTDDKV 123
           LSGV HARFFSVDVV+MPTI D+KLQ AFKDLMAASWDNLPE  VYDVK ALSGST+DK 
Sbjct: 61  LSGVAHARFFSVDVVNMPTIGDTKLQNAFKDLMAASWDNLPESVVYDVKAALSGSTEDKA 120

Query: 124 GKEIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDRYIA 183
           GKEIVENVFR AEA EDFGDIL NL+MEIDDSIG++GE   P+S E+  AL TV DRY A
Sbjct: 121 GKEIVENVFRAAEAAEDFGDILINLKMEIDDSIGVSGEDVKPLSDELKKALQTVYDRYTA 180

Query: 184 YLDAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQRA 242
           YLDAFGPEENYLRKKVE ELGTKM++LKMRC  LG +W K+SVLGTSGLSGSYVEQRA
Sbjct: 181 YLDAFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 238

[Close]
BLAST of Sed0012636 vs. ExPASy Swiss-Prot
Match: Q9SX77 (Succinate dehydrogenase subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH5 PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 4.1e-61
Identity = 113/176 (64.20%), Postives = 138/176 (78.41%), Query Frame = 0 

Query: 66  GVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTDDKVGK 125
           G+G  R FS DV HMP +EDS +  AFKDLMAA W  LP   V D KTA+S +TDDK G+
Sbjct: 82  GMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQ 141

Query: 126 EIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDRYIAYL 185
           E ++NVFR AEAVE+FG ILT+++MEIDDSIG++GE   P+ ++I+DAL T   RY  YL
Sbjct: 142 EALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYL 201

Query: 186 DAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQRA 242
           D+F PEE YL+KKVE+ELGTKM+HLKMRC  LG +W K++VLGTSGLSGSYVEQRA
Sbjct: 202 DSFEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQRA 257

[Close]
BLAST of Sed0012636 vs. ExPASy Swiss-Prot
Match: Q0JDA2 (Succinate dehydrogenase subunit 5, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH5 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-52
Identity = 99/171 (57.89%), Postives = 125/171 (73.10%), Query Frame = 0 

Query: 71  RFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTDDKVGKEIVEN 130
           R FS +  H+P I D +++ AFKDLMAASW  LP+  V + K A S +TDDK GKE + N
Sbjct: 61  RLFSSNEKHLPAISDPEVESAFKDLMAASWTGLPDSLVIEAKKAASKATDDKAGKEALLN 120

Query: 131 VFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDRYIAYLDAFGP 190
           VFR AEA E+FG +L  LRM +DD  G+TGE   P+   I DA+ +   RY+ YL++FGP
Sbjct: 121 VFRAAEACEEFGGVLVTLRMALDDLCGITGENVGPLPGYIEDAVKSAYKRYMKYLESFGP 180

Query: 191 EENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQRA 242
           EENYLRKKVE ELGTKM+HLKMRC  +G +W KI+++GTSG+SGSYVE RA
Sbjct: 181 EENYLRKKVENELGTKMIHLKMRCSGVGSEWGKITLIGTSGISGSYVELRA 231

[Close]
BLAST of Sed0012636 vs. ExPASy TrEMBL
Match: A0A6J1GHW5 (succinate dehydrogenase subunit 5, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454085 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 9.4e-101
Identity = 186/241 (77.18%), Postives = 210/241 (87.14%), Query Frame = 0 

Query: 1   MEKMGILRSLLRSVRTRSIGVAGTGHRNLLQTHHQPARNFSYLSSPRSSFSAFPHRLSSE 60
           MEKM +LRSLLRSVR  S  +AG  HR+LLQ+++Q ARNFSY+SSPRSSFS  P R+S +
Sbjct: 1   MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQSYYQAARNFSYISSPRSSFSDSPLRVSYD 60

Query: 61  CGYLSGVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTD 120
           CGYLSGVGHARFFSVDVVHMPTIEDSKLQ AFKDLMAASWDNLPEP VYDVK ALSGST+
Sbjct: 61  CGYLSGVGHARFFSVDVVHMPTIEDSKLQNAFKDLMAASWDNLPEPVVYDVKAALSGSTN 120

Query: 121 DKVGKEIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDR 180
           D+ GKEIVENVFR AEA E+FG ILT+L+M+IDDSIGL+GE   P+S+E+ +AL TV DR
Sbjct: 121 DEAGKEIVENVFRAAEAAEEFGGILTSLKMKIDDSIGLSGEDVKPLSNELKNALQTVHDR 180

Query: 181 YIAYLDAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQR 240
           Y AYLDAFGPEENYL+KKVE ELGTKM+HLKMRC  LG +W K+SVLGTSGLSGSYVEQR
Sbjct: 181 YTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]
BLAST of Sed0012636 vs. ExPASy TrEMBL
Match: A0A6J1KS18 (succinate dehydrogenase subunit 5, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495971 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 3.0e-99
Identity = 184/241 (76.35%), Postives = 207/241 (85.89%), Query Frame = 0 

Query: 1   MEKMGILRSLLRSVRTRSIGVAGTGHRNLLQTHHQPARNFSYLSSPRSSFSAFPHRLSSE 60
           MEKM +LRSLLRSVR  S  +AG  HR+LLQ+H+Q ARNFS+LSSPRSSFS  P R+S +
Sbjct: 1   MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQSHYQAARNFSHLSSPRSSFSDSPQRVSYD 60

Query: 61  CGYLSGVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTD 120
           CGYLSGVGHARFFSVDV HMPTIEDSKLQ AFKDLMAASWDNLPE  VYDVK ALSGST+
Sbjct: 61  CGYLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVALSGSTN 120

Query: 121 DKVGKEIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDR 180
           D+ GKEIVENVFR AEA E+FG ILT+L+M+IDDSIGL+GE   P+S E+ +AL TV DR
Sbjct: 121 DEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNALQTVHDR 180

Query: 181 YIAYLDAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQR 240
           Y +YLDAFGPEENYL+KKVE ELGTKM+HLKMRC  LG +W K+SVLGTSGLSGSYVEQR
Sbjct: 181 YTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]
BLAST of Sed0012636 vs. ExPASy TrEMBL
Match: A0A6J1HCU3 (succinate dehydrogenase subunit 5, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111462814 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.4e-96
Identity = 185/239 (77.41%), Postives = 202/239 (84.52%), Query Frame = 0 

Query: 4   MGILRSLLRSVRTRSIGVAGTGHRNLLQTHHQPARNFSYLSSPRSSFSAFPHRLSS-ECG 63
           M ILRSLLRSVR RS  +AG  HRNLLQ+HHQ AR+F  LSS RSSFS FP R+SS +CG
Sbjct: 1   MVILRSLLRSVRARSYVIAGVTHRNLLQSHHQAARSFFSLSSHRSSFSDFPPRVSSADCG 60

Query: 64  YLSGVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTDDK 123
           YLSGV HARFFSVDVV+MPTI D+KLQ AFKDLMAASWDNLPE  VYDVK ALSGST+DK
Sbjct: 61  YLSGVAHARFFSVDVVNMPTIGDTKLQNAFKDLMAASWDNLPESVVYDVKAALSGSTEDK 120

Query: 124 VGKEIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDRYI 183
            GKEIVENVFR AEA EDFGDIL NL+MEIDDSIG++GE   P+S E+  AL TV DRY 
Sbjct: 121 AGKEIVENVFRAAEAAEDFGDILVNLKMEIDDSIGVSGEDVKPLSDELKKALQTVYDRYT 180

Query: 184 AYLDAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQRA 242
           AYLDAFGPEENYLRKKVE ELGTKM++LKMRC  LG +W K+SVLGTSGLSGSYVEQRA
Sbjct: 181 AYLDAFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 239

[Close]
BLAST of Sed0012636 vs. ExPASy TrEMBL
Match: A0A0A0LP60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360050 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.1e-96
Identity = 181/241 (75.10%), Postives = 201/241 (83.40%), Query Frame = 0 

Query: 1   MEKMGILRSLLRSVRTRSIGVAGTGHRNLLQTHHQPARNFSYLSSPRSSFSAFPHRLSSE 60
           MEK  ILRSLLRSVR RS G+AG  HRNLLQ++HQ AR+F YLSS R SFS  P R+SS+
Sbjct: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60

Query: 61  CGYLSGVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTD 120
           C Y SGVGHAR+FS DVV MPTIED KLQ  FKDLMAASWD LPE  +YDVKTALSGSTD
Sbjct: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120

Query: 121 DKVGKEIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDR 180
           DK GKEIVENVFR AEA E+FGD+L NL+MEIDDSIGL+GE   P+S E+  AL TV +R
Sbjct: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180

Query: 181 YIAYLDAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQR 240
           YIAYLD+FGPEENYLRKKVE ELGTKM++LKMRC  LG +W K+SVLGTSGLSGSYVEQR
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]
BLAST of Sed0012636 vs. ExPASy TrEMBL
Match: A0A6J1KAU4 (succinate dehydrogenase subunit 5, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111491709 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.7e-94
Identity = 183/239 (76.57%), Postives = 200/239 (83.68%), Query Frame = 0 

Query: 4   MGILRSLLRSVRTRSIGVAGTGHRNLLQTHHQPARNFSYLSSPRSSFSAFPHRLSS-ECG 63
           M ILRSLLRSVR RS  +AG  HRNLL++HH  AR+F  L S RSSFS FP R+SS +CG
Sbjct: 1   MVILRSLLRSVRARSYVIAGVTHRNLLKSHHLAARSFFSLLSHRSSFSDFPLRVSSADCG 60

Query: 64  YLSGVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTDDK 123
           YLSGV HARFFSVDVV+MPTI D+KLQ AFKDLMAASWDNLPE  VYDVK ALSGST+DK
Sbjct: 61  YLSGVAHARFFSVDVVNMPTIGDTKLQNAFKDLMAASWDNLPESVVYDVKAALSGSTEDK 120

Query: 124 VGKEIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDRYI 183
            GKEIVENVFR AEA EDFGDIL NL+MEIDDSIG++GE   P+S E+  AL TV DRY 
Sbjct: 121 AGKEIVENVFRAAEAAEDFGDILINLKMEIDDSIGVSGEDVKPLSDELKKALQTVYDRYT 180

Query: 184 AYLDAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQRA 242
           AYLDAFGPEENYLRKKVE ELGTKM++LKMRC  LG +W KISVLGTSGLSGSYVEQRA
Sbjct: 181 AYLDAFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKISVLGTSGLSGSYVEQRA 239

[Close]
BLAST of Sed0012636 vs. TAIR 10
Match: AT1G47420.1 (succinate dehydrogenase 5 )

HSP 1 Score: 236.1 bits (601), Expect = 2.9e-62
Identity = 113/176 (64.20%), Postives = 138/176 (78.41%), Query Frame = 0 

Query: 66  GVGHARFFSVDVVHMPTIEDSKLQRAFKDLMAASWDNLPEPAVYDVKTALSGSTDDKVGK 125
           G+G  R FS DV HMP +EDS +  AFKDLMAA W  LP   V D KTA+S +TDDK G+
Sbjct: 82  GMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQ 141

Query: 126 EIVENVFRVAEAVEDFGDILTNLRMEIDDSIGLTGEAASPMSHEISDALDTVLDRYIAYL 185
           E ++NVFR AEAVE+FG ILT+++MEIDDSIG++GE   P+ ++I+DAL T   RY  YL
Sbjct: 142 EALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYL 201

Query: 186 DAFGPEENYLRKKVEIELGTKMLHLKMRCYSLGPQWSKISVLGTSGLSGSYVEQRA 242
           D+F PEE YL+KKVE+ELGTKM+HLKMRC  LG +W K++VLGTSGLSGSYVEQRA
Sbjct: 202 DSFEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQRA 257

The following BLAST results are available for this feature:
BLAST of Sed0012636 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951155.11.9e-10077.18succinate dehydrogenase subunit 5, mitochondrial-like [Cucurbita moschata][more]
XP_023001943.16.2e-9976.35succinate dehydrogenase subunit 5, mitochondrial-like [Cucurbita maxima][more]
XP_023537918.11.8e-9875.93succinate dehydrogenase subunit 5, mitochondrial-like [Cucurbita pepo subsp. pep... [more]
KAG6598386.11.2e-9777.73Succinate dehydrogenase subunit 5, mitochondrial, partial [Cucurbita argyrosperm... [more]
XP_023546793.11.7e-9677.31succinate dehydrogenase subunit 5, mitochondrial-like isoform X2 [Cucurbita pepo... [more]
BLAST of Sed0012636 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SX774.1e-6164.20Succinate dehydrogenase subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
Q0JDA21.2e-5257.89Succinate dehydrogenase subunit 5, mitochondrial OS=Oryza sativa subsp. japonica... [more]
BLAST of Sed0012636 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GHW59.4e-10177.18succinate dehydrogenase subunit 5, mitochondrial-like OS=Cucurbita moschata OX=3... [more]
A0A6J1KS183.0e-9976.35succinate dehydrogenase subunit 5, mitochondrial-like OS=Cucurbita maxima OX=366... [more]
A0A6J1HCU31.4e-9677.41succinate dehydrogenase subunit 5, mitochondrial-like OS=Cucurbita moschata OX=3... [more]
A0A0A0LP603.1e-9675.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360050 PE=4 SV=1[more]
A0A6J1KAU41.7e-9476.57succinate dehydrogenase subunit 5, mitochondrial-like OS=Cucurbita maxima OX=366... [more]
BLAST of Sed0012636 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G47420.12.9e-6264.20succinate dehydrogenase 5 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025397Succinate dehydrogenase subunit 5, mitochondrialPFAMPF14290DUF4370coord: 1..241
e-value: 1.9E-94
score: 316.0
IPR025397Succinate dehydrogenase subunit 5, mitochondrialPANTHERPTHR36139SUCCINATE DEHYDROGENASE SUBUNIT 5, MITOCHONDRIALcoord: 2..241
NoneNo IPR availablePANTHERPTHR36139:SF1SUCCINATE DEHYDROGENASE SUBUNIT 5, MITOCHONDRIALcoord: 2..241

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0012636.1Sed0012636.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006099 tricarboxylic acid cycle
cellular_component GO:0045273 respiratory chain complex II