Homology
BLAST of Sed0012628 vs. NCBI nr
Match:
XP_038880487.1 (pentatricopeptide repeat-containing protein At1g08610 [Benincasa hispida] >XP_038880488.1 pentatricopeptide repeat-containing protein At1g08610 [Benincasa hispida])
HSP 1 Score: 994.2 bits (2569), Expect = 4.8e-286
Identity = 482/594 (81.14%), Postives = 533/594 (89.73%), Query Frame = 0
Query: 1 MAYTSAIRNCMLAVNGLYECSKQEYVGTGICHCSLGKDKSSSLHFNCLWKSSCSSSYSCH 60
MAYT ++N M+ VNGL+ECSKQEY TGI CSL K+K SSLH NC KSSCSSSYSCH
Sbjct: 1 MAYTLTVQNYMVTVNGLHECSKQEYANTGIGQCSLEKEKPSSLHLNCFCKSSCSSSYSCH 60
Query: 61 WSATLGLGRKQQVLQCQGVQRSVCVDNVEEAYGDELVFNGHEINDERNFVEKMSKKRPGS 120
S TLGLGRKQ VL C+G+QRSVC+D V++AY DEL NGHE ERNFVEKM+KK+ S
Sbjct: 61 MSTTLGLGRKQHVLHCKGLQRSVCIDRVDDAYEDELALNGHETTVERNFVEKMTKKKLSS 120
Query: 121 PNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIR 180
NGS+LYLDG FVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFH CVNLIR
Sbjct: 121 HNGSALYLDGPFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHCCVNLIR 180
Query: 181 GFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPP 240
GFVK+DRMDKAVQ LKIMVMSGG PD+ITYNM+IGGLCK+GHL+SAIELLD+MS SGCPP
Sbjct: 181 GFVKIDRMDKAVQVLKIMVMSGGAPDIITYNMMIGGLCKQGHLDSAIELLDNMSFSGCPP 240
Query: 241 DVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVL 300
DVITYNAV+R M +NG++DQAV+FWK+Q+RKGTPPYLITYTILIEL+CKH GT RAIEVL
Sbjct: 241 DVITYNAVIRRMFDNGYFDQAVEFWKEQIRKGTPPYLITYTILIELICKHCGTARAIEVL 300
Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARR 360
EEMANEGCYPDLVTYNSLINLTCKQGK+EDAALVIDNL HGM PNAVTYNT+LHSL+RR
Sbjct: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPNAVTYNTLLHSLSRR 360
Query: 361 GHWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLLDRAINFLSQMFTNNCLPDIITF 420
G WD VDEILTIMS LQ TVVTYNVLINGLCKNGLLDRAINFL+QMF+ NCLPDIIT+
Sbjct: 361 GRWDEVDEILTIMSISLQPPTVVTYNVLINGLCKNGLLDRAINFLNQMFSYNCLPDIITY 420
Query: 421 NTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIME 480
NTLLG L+KEGMVDEAFQLLHLL GTTCSPGLISYNTV+DGLSK+GYM+KAM LYGQ+ E
Sbjct: 421 NTLLGALSKEGMVDEAFQLLHLLTGTTCSPGLISYNTVLDGLSKKGYMDKAMSLYGQMTE 480
Query: 481 SEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDL 540
+ I+PD+ITHRS+IWG CR NKF E+VEIL G L+ G+KVNS+ YRFLVHELC+NKKVDL
Sbjct: 481 NGILPDDITHRSIIWGLCRVNKFVEAVEILKGCLEAGHKVNSSSYRFLVHELCINKKVDL 540
Query: 541 AIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQWKILGKEAV 595
AIQVLEMM+SSR PN TIYSTIINSIASAGLKEQADELRQKLI+WK+LGK+AV
Sbjct: 541 AIQVLEMMLSSRYKPNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQAV 594
BLAST of Sed0012628 vs. NCBI nr
Match:
KAA0038403.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ96989.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 984.9 bits (2545), Expect = 2.9e-283
Identity = 481/594 (80.98%), Postives = 531/594 (89.39%), Query Frame = 0
Query: 1 MAYTSAIRNCMLAVNGLYECSKQEYVGTGICHCSLGKDKSSSLHFNCLWKSSCSSSYSCH 60
MAYT ++N M+ VNG +ECSKQEY TGI C L K+K SSLH NCL KSSC SSYSCH
Sbjct: 1 MAYTLTVQNYMVTVNGQHECSKQEYASTGIGQCLLEKEKLSSLHLNCLCKSSCISSYSCH 60
Query: 61 WSATLGLGRKQQVLQCQGVQRSVCVDNVEEAYGDELVFNGHEINDERNFVEKMSKKRPGS 120
WS TLG GRKQ+VL +G+QRSVC+D V+ Y DELV NGHEI ERNF EKM+KKR S
Sbjct: 61 WSTTLGFGRKQRVLHFKGLQRSVCIDRVDNTYEDELVLNGHEIKVERNFAEKMTKKRISS 120
Query: 121 PNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIR 180
NGSSLYLDG FVGNDE+TNNEILQKFCNKGKLMEASRLVDIMA RNQIP+FH CVNLIR
Sbjct: 121 HNGSSLYLDGPFVGNDEQTNNEILQKFCNKGKLMEASRLVDIMASRNQIPDFHCCVNLIR 180
Query: 181 GFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPP 240
GFVK+DR+DKAVQ LKIMVMSGGVPDVITYNMVIGGLCK+GHLESAIELLDDMSLSGCPP
Sbjct: 181 GFVKIDRIDKAVQVLKIMVMSGGVPDVITYNMVIGGLCKQGHLESAIELLDDMSLSGCPP 240
Query: 241 DVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVL 300
DVITYNAV+R M +NG +DQA++FWK+QLRKGTPPYLITYTILIELV KHRGTVRAIEVL
Sbjct: 241 DVITYNAVIRHMFDNGCFDQAIEFWKEQLRKGTPPYLITYTILIELVWKHRGTVRAIEVL 300
Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARR 360
EEMANEGCYPDLVTYNSLINLTCKQGK+ED ALVIDNL HGM P+AVTYNT+LHSL+RR
Sbjct: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDTALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360
Query: 361 GHWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLLDRAINFLSQMFTNNCLPDIITF 420
G WD VDEIL IMS LQ TVVTYNVLINGLCKNGLLD AINFL+QMF+NNCLPDIIT+
Sbjct: 361 GRWDEVDEILKIMSISLQPPTVVTYNVLINGLCKNGLLDSAINFLNQMFSNNCLPDIITY 420
Query: 421 NTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIME 480
NTLLG L+KEGMVDEAFQLLHLL G+ CSPGLISYNTV+DGLSK+GYM+KAM LY Q+ME
Sbjct: 421 NTLLGALSKEGMVDEAFQLLHLLIGSACSPGLISYNTVLDGLSKKGYMDKAMSLYSQMME 480
Query: 481 SEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDL 540
+ I+PD+ITHRS+IWGFCR+NKF E+VEIL G LKGG+KVNS+ YRFLVHELC+NKKVDL
Sbjct: 481 NGIMPDDITHRSIIWGFCRSNKFVEAVEILKGILKGGHKVNSSSYRFLVHELCINKKVDL 540
Query: 541 AIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQWKILGKEAV 595
AIQVLEMM+SS+C PN TIYSTIINSIAS+GLKEQADELRQKLI+ K+LGK+AV
Sbjct: 541 AIQVLEMMLSSQCKPNETIYSTIINSIASSGLKEQADELRQKLIELKVLGKQAV 594
BLAST of Sed0012628 vs. NCBI nr
Match:
XP_008443760.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08610 [Cucumis melo])
HSP 1 Score: 984.6 bits (2544), Expect = 3.8e-283
Identity = 481/594 (80.98%), Postives = 531/594 (89.39%), Query Frame = 0
Query: 1 MAYTSAIRNCMLAVNGLYECSKQEYVGTGICHCSLGKDKSSSLHFNCLWKSSCSSSYSCH 60
MAYT ++N M+ VNG +ECSKQEY TGI C L K+K SSLH NCL KSSC SSYSCH
Sbjct: 1 MAYTLTVQNYMVTVNGQHECSKQEYASTGIGQCLLEKEKLSSLHLNCLCKSSCISSYSCH 60
Query: 61 WSATLGLGRKQQVLQCQGVQRSVCVDNVEEAYGDELVFNGHEINDERNFVEKMSKKRPGS 120
WS TLG GRKQ+VL +G+QRSVC+D V+ Y DELV NGHEI ERNF EKM+KKR S
Sbjct: 61 WSTTLGFGRKQRVLHFKGLQRSVCIDRVDNTYEDELVLNGHEIKVERNFAEKMTKKRISS 120
Query: 121 PNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIR 180
NGSSLYLDG FVGNDE+TNNEILQKFCNKGKLMEASRLVDIMA RNQIP+FH CVNLIR
Sbjct: 121 HNGSSLYLDGPFVGNDEQTNNEILQKFCNKGKLMEASRLVDIMASRNQIPDFHCCVNLIR 180
Query: 181 GFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPP 240
GFVK+DR+DKAVQ LKIMVMSGGVPDVITYNMVIGGLCK+GHLESAIELLDDMSLSGCPP
Sbjct: 181 GFVKIDRIDKAVQALKIMVMSGGVPDVITYNMVIGGLCKQGHLESAIELLDDMSLSGCPP 240
Query: 241 DVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVL 300
DVITYNAV+R M +NG +DQA++FWK+QLRKGTPPYLITYTILIELV KHRGTVRAIEVL
Sbjct: 241 DVITYNAVIRHMFDNGCFDQAIEFWKEQLRKGTPPYLITYTILIELVWKHRGTVRAIEVL 300
Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARR 360
EEMANEGCYPDLVTYNSLINLTCKQGK+ED ALVIDNL HGM P+AVTYNT+LHSL+RR
Sbjct: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDTALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360
Query: 361 GHWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLLDRAINFLSQMFTNNCLPDIITF 420
G WD VDEIL IMS LQ TVVTYNVLINGLCKNGLLD AINFL+QMF+NNCLPDIIT+
Sbjct: 361 GRWDEVDEILKIMSISLQPPTVVTYNVLINGLCKNGLLDSAINFLNQMFSNNCLPDIITY 420
Query: 421 NTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIME 480
NTLLG L+KEGMVDEAFQLLHLL G+ CSPGLISYNTV+DGLSK+GYM+KAM LY Q+ME
Sbjct: 421 NTLLGALSKEGMVDEAFQLLHLLIGSACSPGLISYNTVLDGLSKKGYMDKAMSLYSQMME 480
Query: 481 SEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDL 540
+ I+PD+ITHRS+IWGFCR+NKF E+VEIL G LKGG+KVNS+ YRFLVHELC+NKKVDL
Sbjct: 481 NGIMPDDITHRSIIWGFCRSNKFVEAVEILKGILKGGHKVNSSSYRFLVHELCINKKVDL 540
Query: 541 AIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQWKILGKEAV 595
AIQVLEMM+SS+C PN TIYSTIINSIAS+GLKEQADELRQKLI+ K+LGK+AV
Sbjct: 541 AIQVLEMMLSSQCKPNETIYSTIINSIASSGLKEQADELRQKLIELKVLGKKAV 594
BLAST of Sed0012628 vs. NCBI nr
Match:
XP_022158526.1 (pentatricopeptide repeat-containing protein At1g08610 [Momordica charantia] >XP_022158527.1 pentatricopeptide repeat-containing protein At1g08610 [Momordica charantia])
HSP 1 Score: 961.4 bits (2484), Expect = 3.5e-276
Identity = 466/594 (78.45%), Postives = 527/594 (88.72%), Query Frame = 0
Query: 1 MAYTSAIRNCMLAVNGLYECSKQEYVGTGICHCSLGKDKSSSLHFNCLWKSSCSSSYSCH 60
MAYT +N + +GL+ECSKQEYV T I C + +K S+LH NCL KSSCSSSYSCH
Sbjct: 1 MAYTLTFQNYTVTAHGLHECSKQEYVSTCIAQCPM--EKPSALHLNCLCKSSCSSSYSCH 60
Query: 61 WSATLGLGRKQQVLQCQGVQRSVCVDNVEEAYGDELVFNGHEINDERNFVEKMSKKRPGS 120
WSA LGL RK +VL C+GVQRSVC+D V++AY DEL NGHE+ ERN E+M+KKR S
Sbjct: 61 WSANLGLFRKLRVLHCRGVQRSVCIDRVDDAYQDELALNGHEVKVERNLFEQMTKKRLSS 120
Query: 121 PNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIR 180
NGSSLYLDG FVGND ETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFH C+NLIR
Sbjct: 121 HNGSSLYLDGPFVGNDGETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHCCINLIR 180
Query: 181 GFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPP 240
GFVK+DR+DKAVQ LKIMVMSGGVPDVITYNMVIGGLCK+GHLESAIELLDDMSLSGCPP
Sbjct: 181 GFVKIDRLDKAVQVLKIMVMSGGVPDVITYNMVIGGLCKQGHLESAIELLDDMSLSGCPP 240
Query: 241 DVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVL 300
DVITYNAV+R MC+NG++DQAV+FWK+QLRKGTPPYLITYTILIELVCKHRGT+ AIEVL
Sbjct: 241 DVITYNAVIRCMCDNGYFDQAVEFWKEQLRKGTPPYLITYTILIELVCKHRGTLHAIEVL 300
Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARR 360
EEMA EGCYPDLVTYNSLINL CKQGK+E A LVI++L HGMEPNAVTYNT+LHSLARR
Sbjct: 301 EEMAAEGCYPDLVTYNSLINLNCKQGKFEGATLVINDLLDHGMEPNAVTYNTLLHSLARR 360
Query: 361 GHWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLLDRAINFLSQMFTNNCLPDIITF 420
G WD VDEILTIMS Q TVVTYN+LINGLCKNGLLDRAINFL+QMF+ +CLPDIIT+
Sbjct: 361 GRWDEVDEILTIMSQSFQPPTVVTYNILINGLCKNGLLDRAINFLNQMFSYHCLPDIITY 420
Query: 421 NTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIME 480
NTLLG L+KEG+VDEAFQLLHLL GT+CSPGLISYN VIDGLSK+G MEKAMRLY Q++E
Sbjct: 421 NTLLGALSKEGLVDEAFQLLHLLTGTSCSPGLISYNIVIDGLSKKGEMEKAMRLYSQMIE 480
Query: 481 SEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDL 540
+ IVPDEITHR+LIWG+CRAN+ EE+VEIL GF+K G K++S+ Y FLVHELC+N+KVDL
Sbjct: 481 NGIVPDEITHRALIWGYCRANEVEEAVEILKGFIKKGRKISSSSYTFLVHELCINEKVDL 540
Query: 541 AIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQWKILGKEAV 595
+IQVLE+M+S+RC PN TIYSTII+SIASAG K+QADELR+KLI+WK+LGKEAV
Sbjct: 541 SIQVLEVMLSARCKPNETIYSTIISSIASAGFKDQADELREKLIEWKVLGKEAV 592
BLAST of Sed0012628 vs. NCBI nr
Match:
XP_004142592.1 (pentatricopeptide repeat-containing protein At1g08610 [Cucumis sativus] >KGN66733.1 hypothetical protein Csa_007660 [Cucumis sativus])
HSP 1 Score: 937.2 bits (2421), Expect = 7.0e-269
Identity = 461/592 (77.87%), Postives = 514/592 (86.82%), Query Frame = 0
Query: 1 MAYTSAIRNCMLAVNGLYECSKQEYVGTGICHCSLGKDKSSSLHFNCLWKSSCSSSYSCH 60
MAY ++N M+ VNGL+ECSKQEY TGI C L K+K SSLH L K+S + SYSCH
Sbjct: 1 MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCH 60
Query: 61 WSATLGLGRKQQVLQCQGVQRSVCVDNVEEAYGDELVFNGHEINDERNFVEKMSKKRPGS 120
WS TLGLGRKQ+VL +G+QRSVC+D V++ Y DEL NGHEI ERNF EK++KKR GS
Sbjct: 61 WSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGS 120
Query: 121 PNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIR 180
N SSLYLDG FVGNDEETNN ILQKFC KGKLMEASR+VDIMA RNQIP+F C+N+IR
Sbjct: 121 HNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIR 180
Query: 181 GFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPP 240
GFV DRMDKAVQ LKIMVMSGGVPD+ITYNMVIG LCK+GHLESAIELL+DMSLSGCPP
Sbjct: 181 GFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPP 240
Query: 241 DVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVL 300
DVITYNAV+R M +NG +DQAV+FWK+QLRKGTPPYLITYTILIELV KHRGTV A+EVL
Sbjct: 241 DVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVL 300
Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARR 360
EEMANEGCYPDLVTYNSLINLTCKQGK+EDAALVIDNL HGM P+AVTYNT+LHSL+RR
Sbjct: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360
Query: 361 GHWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLLDRAINFLSQMFTNNCLPDIITF 420
GHWD VDEIL IMS LQ TVVT NVLINGLCKNGLLD AINFL+QMF+ NCLPDIIT+
Sbjct: 361 GHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITY 420
Query: 421 NTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIME 480
NTLLG L KEGMVDEAFQLLHLL T CSPGLISYNTV+DGLS++GYM+KAM LY Q+ME
Sbjct: 421 NTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMME 480
Query: 481 SEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDL 540
+ I+PD+ THRS+IWGFCR+NKF E+VE L G LKGGY+VNS+ YR LVHELC+NKKVDL
Sbjct: 481 NGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDL 540
Query: 541 AIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQWKILGKE 593
AIQVLEMM+SS C N TIYSTIINSIASAGLKEQADELRQKLI+WK+LGK+
Sbjct: 541 AIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQ 592
BLAST of Sed0012628 vs. ExPASy Swiss-Prot
Match:
Q9FRS4 (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX=3702 GN=At1g08610 PE=2 SV=1)
HSP 1 Score: 577.4 bits (1487), Expect = 1.9e-163
Identity = 275/538 (51.12%), Postives = 378/538 (70.26%), Query Frame = 0
Query: 52 SCSSSYSCHWSATLGLGRKQQVLQCQGVQRSVCVDNVEEAYGDELVFNGHEINDERNFVE 111
SC S W +GL +K +C G+ SVC+DNV + F+ + +
Sbjct: 27 SCRKFSSLDWKQEIGL-KKDVFFRCHGLLSSVCIDNVNDHAERSSEFHHYGVGTNLRARV 86
Query: 112 KMSKKRPGSPNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPE 171
K K+ L DG NDEETNNEIL C+ GKL +A +LV++MAR NQ+P
Sbjct: 87 KPMKQ-------FGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPH 146
Query: 172 FHSCVNLIRGFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLD 231
F SC NL+RG ++D++DKA+ L++MVMSGGVPD ITYNM+IG LCK+GH+ +A+ LL+
Sbjct: 147 FPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLE 206
Query: 232 DMSLSGCPPDVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHR 291
DMSLSG PPDVITYN V+R M + G+ +QA+ FWKDQL+ G PP++ITYT+L+ELVC++
Sbjct: 207 DMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYC 266
Query: 292 GTVRAIEVLEEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYN 351
G+ RAIEVLE+MA EGCYPD+VTYNSL+N C++G E+ A VI ++ HG+E N VTYN
Sbjct: 267 GSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYN 326
Query: 352 TILHSLARRGHWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLLDRAINFLSQMFTN 411
T+LHSL +WD V+EIL IM TV+TYN+LINGLCK LL RAI+F QM
Sbjct: 327 TLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQ 386
Query: 412 NCLPDIITFNTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKA 471
CLPDI+T+NT+LG ++KEGMVD+A +LL LLK T C PGLI+YN+VIDGL+K+G M+KA
Sbjct: 387 KCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKA 446
Query: 472 MRLYGQIMESEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYRFLVHE 531
+ LY Q++++ I PD+IT RSLI+GFCRAN EE+ ++L G + + YR ++
Sbjct: 447 LELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQG 506
Query: 532 LCVNKKVDLAIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQWKIL 590
LC K++++AI+V+E+M++ C P+ TIY+ I+ + G+ +A +L++KL QWK+L
Sbjct: 507 LCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKLKQWKLL 556
BLAST of Sed0012628 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 351.3 bits (900), Expect = 2.2e-95
Identity = 184/507 (36.29%), Postives = 295/507 (58.19%), Query Frame = 0
Query: 122 NGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIRG 181
NG ++ SF D E+NN L++ G+L E + ++ M +P+ C LIRG
Sbjct: 88 NGHYSSVNSSFALEDVESNNH-LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG 147
Query: 182 FVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPPD 241
F ++ + KA + L+I+ SG VPDVITYN++I G CK G + +A+ +LD MS+S PD
Sbjct: 148 FCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PD 207
Query: 242 VITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVLE 301
V+TYN ++RS+C++G QA++ L++ P +ITYTILIE C+ G A+++L+
Sbjct: 208 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 267
Query: 302 EMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARRG 361
EM + GC PD+VTYN L+N CK+G+ ++A ++++ G +PN +T+N IL S+ G
Sbjct: 268 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 327
Query: 362 HWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLL----------------------- 421
W +++L M + + +VVT+N+LIN LC+ GLL
Sbjct: 328 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 387
Query: 422 ------------DRAINFLSQMFTNNCLPDIITFNTLLGTLTKEGMVDEAFQLLHLLKGT 481
DRAI +L +M + C PDI+T+NT+L L K+G V++A ++L+ L
Sbjct: 388 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 447
Query: 482 TCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIMESEIVPDEITHRSLIWGFCRANKFEES 541
CSP LI+YNTVIDGL+K G KA++L ++ ++ PD IT+ SL+ G R K +E+
Sbjct: 448 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 507
Query: 542 VEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDLAIQVLEMMISSRCIPNGTIYSTIINS 594
++ + F + G + N+ + ++ LC +++ D AI L MI+ C PN T Y+ +I
Sbjct: 508 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 567
BLAST of Sed0012628 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 285.0 bits (728), Expect = 1.9e-75
Identity = 155/479 (32.36%), Postives = 245/479 (51.15%), Query Frame = 0
Query: 142 EILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIRGFVKMDRMDKAVQTLKIMVMS 201
+I + C G +E+ L++ M R+ P+ C LI+GF + + KAV+ ++I+
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL-EK 153
Query: 202 GGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPPDVITYNAVVRSMCENGHYDQA 261
G PDV YN +I G CK ++ A +LD M PD +TYN ++ S+C G D A
Sbjct: 154 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 213
Query: 262 VDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVLEEMANEGCYPDLVTYNSLINL 321
+ L P +ITYTILIE G A+++++EM + G PD+ TYN++I
Sbjct: 214 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 273
Query: 322 TCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARRGHWDGVDEILTIMSNRLQALT 381
CK+G + A ++ NL + G EP+ ++YN +L +L +G W+ ++++T M +
Sbjct: 274 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 333
Query: 382 VVTYNVLINGLCKN-----------------------------------GLLDRAINFLS 441
VVTY++LI LC++ G LD AI FL
Sbjct: 334 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 393
Query: 442 QMFTNNCLPDIITFNTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQG 501
M ++ CLPDI+ +NT+L TL K G D+A ++ L CSP SYNT+ L G
Sbjct: 394 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 453
Query: 502 YMEKAMRLYGQIMESEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYR 561
+A+ + ++M + I PDEIT+ S+I CR +E+ E+L + + Y
Sbjct: 454 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 513
Query: 562 FLVHELCVNKKVDLAIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQ 586
++ C +++ AI VLE M+ + C PN T Y+ +I I AG + +A EL L++
Sbjct: 514 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
BLAST of Sed0012628 vs. ExPASy Swiss-Prot
Match:
Q9CAN5 (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63080 PE=2 SV=1)
HSP 1 Score: 236.9 bits (603), Expect = 5.9e-61
Identity = 131/452 (28.98%), Postives = 226/452 (50.00%), Query Frame = 0
Query: 139 TNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIRGFVKMDRMDKAVQTLKIM 198
T N +L FC+ ++ EA LVD M P+ + L+ G + ++ +AV ++ M
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
Query: 199 VMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPPDVITYNAVVRSMCENGHY 258
V+ G PD++TY VI GLCKRG + A+ LL+ M DV+ Y+ V+ S+C+ H
Sbjct: 197 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV 256
Query: 259 DQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVLEEMANEGCYPDLVTYNSL 318
D A++ + + KG P + TY+ LI +C + A +L +M P++VT+NSL
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 319 INLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARRGHWDGVDEILTIMSNRLQ 378
I+ K+GK +A + D + ++PN VTYN++++ D +I T+M ++
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 379 ALTVVTYNVLINGLCKNGLLDRAINFLSQMFTNNCLPDIITFNTLLGTLTKEGMVDEAFQ 438
VVTYN LING CK + + M + + +T+ TL+ + D A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 439 LLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIMESEIVPDEITHRSLIWGFC 498
+ + P +++YNT++DGL K G +EKAM ++ + +S++ PD T+ + G C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 499 RANKFEESVEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDLAIQVLEMMISSRCIPNGT 558
+A K E+ ++ G K + Y ++ C + A + M +P+
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 559 IYSTIINSIASAGLKEQADELRQKLIQWKILG 591
Y+T+I + G K + EL +++ + G
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMRSCRFAG 588
BLAST of Sed0012628 vs. ExPASy Swiss-Prot
Match:
A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)
HSP 1 Score: 233.4 bits (594), Expect = 6.6e-60
Identity = 146/515 (28.35%), Postives = 250/515 (48.54%), Query Frame = 0
Query: 120 SPNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLI 179
SP S+ + GS D ++ + ++ L ++ ++ + P L+
Sbjct: 54 SPKDSAFTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLL 113
Query: 180 RGFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCP 239
K +R+ KA++ +++MV SG +PD Y ++ LCKRG++ A++L++ M G P
Sbjct: 114 YDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYP 173
Query: 240 PDVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEV 299
+ +TYNA+VR +C G +Q++ F + ++KG P TY+ L+E K RGT A+++
Sbjct: 174 SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKL 233
Query: 300 LEEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLAR 359
L+E+ +G P+LV+YN L+ CK+G+ +DA + L G + N V+YN +L L
Sbjct: 234 LDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCC 293
Query: 360 RGHWDGVDEILTIMSNRLQALTVVTYNVLING---------------------------- 419
G W+ + +L M +A +VVTYN+LIN
Sbjct: 294 DGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTA 353
Query: 420 ---------LCKNGLLDRAINFLSQMFTNNCLPDIITFNTLLGTLTKEGMVDEAFQLLHL 479
LCK G +D + L +M C P+ T+N + V EAF ++
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQS 413
Query: 480 L--KGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIMESEIVPDEITHRSLIWGFCRA 539
L K C+ Y +VI L ++G A +L ++ PD T+ +LI G C
Sbjct: 414 LSNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLE 473
Query: 540 NKFEESVEILNGFLKG-GYKVNSNCYRFLVHELCVNKKVDLAIQVLEMMISSRCIPNGTI 595
F ++E+L+ + K + + ++ LC ++ DLA++V EMM+ + +PN T
Sbjct: 474 GMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETT 533
BLAST of Sed0012628 vs. ExPASy TrEMBL
Match:
A0A5A7T640 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00370 PE=4 SV=1)
HSP 1 Score: 984.9 bits (2545), Expect = 1.4e-283
Identity = 481/594 (80.98%), Postives = 531/594 (89.39%), Query Frame = 0
Query: 1 MAYTSAIRNCMLAVNGLYECSKQEYVGTGICHCSLGKDKSSSLHFNCLWKSSCSSSYSCH 60
MAYT ++N M+ VNG +ECSKQEY TGI C L K+K SSLH NCL KSSC SSYSCH
Sbjct: 1 MAYTLTVQNYMVTVNGQHECSKQEYASTGIGQCLLEKEKLSSLHLNCLCKSSCISSYSCH 60
Query: 61 WSATLGLGRKQQVLQCQGVQRSVCVDNVEEAYGDELVFNGHEINDERNFVEKMSKKRPGS 120
WS TLG GRKQ+VL +G+QRSVC+D V+ Y DELV NGHEI ERNF EKM+KKR S
Sbjct: 61 WSTTLGFGRKQRVLHFKGLQRSVCIDRVDNTYEDELVLNGHEIKVERNFAEKMTKKRISS 120
Query: 121 PNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIR 180
NGSSLYLDG FVGNDE+TNNEILQKFCNKGKLMEASRLVDIMA RNQIP+FH CVNLIR
Sbjct: 121 HNGSSLYLDGPFVGNDEQTNNEILQKFCNKGKLMEASRLVDIMASRNQIPDFHCCVNLIR 180
Query: 181 GFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPP 240
GFVK+DR+DKAVQ LKIMVMSGGVPDVITYNMVIGGLCK+GHLESAIELLDDMSLSGCPP
Sbjct: 181 GFVKIDRIDKAVQVLKIMVMSGGVPDVITYNMVIGGLCKQGHLESAIELLDDMSLSGCPP 240
Query: 241 DVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVL 300
DVITYNAV+R M +NG +DQA++FWK+QLRKGTPPYLITYTILIELV KHRGTVRAIEVL
Sbjct: 241 DVITYNAVIRHMFDNGCFDQAIEFWKEQLRKGTPPYLITYTILIELVWKHRGTVRAIEVL 300
Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARR 360
EEMANEGCYPDLVTYNSLINLTCKQGK+ED ALVIDNL HGM P+AVTYNT+LHSL+RR
Sbjct: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDTALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360
Query: 361 GHWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLLDRAINFLSQMFTNNCLPDIITF 420
G WD VDEIL IMS LQ TVVTYNVLINGLCKNGLLD AINFL+QMF+NNCLPDIIT+
Sbjct: 361 GRWDEVDEILKIMSISLQPPTVVTYNVLINGLCKNGLLDSAINFLNQMFSNNCLPDIITY 420
Query: 421 NTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIME 480
NTLLG L+KEGMVDEAFQLLHLL G+ CSPGLISYNTV+DGLSK+GYM+KAM LY Q+ME
Sbjct: 421 NTLLGALSKEGMVDEAFQLLHLLIGSACSPGLISYNTVLDGLSKKGYMDKAMSLYSQMME 480
Query: 481 SEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDL 540
+ I+PD+ITHRS+IWGFCR+NKF E+VEIL G LKGG+KVNS+ YRFLVHELC+NKKVDL
Sbjct: 481 NGIMPDDITHRSIIWGFCRSNKFVEAVEILKGILKGGHKVNSSSYRFLVHELCINKKVDL 540
Query: 541 AIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQWKILGKEAV 595
AIQVLEMM+SS+C PN TIYSTIINSIAS+GLKEQADELRQKLI+ K+LGK+AV
Sbjct: 541 AIQVLEMMLSSQCKPNETIYSTIINSIASSGLKEQADELRQKLIELKVLGKQAV 594
BLAST of Sed0012628 vs. ExPASy TrEMBL
Match:
A0A1S3B8B2 (pentatricopeptide repeat-containing protein At1g08610 OS=Cucumis melo OX=3656 GN=LOC103487276 PE=4 SV=1)
HSP 1 Score: 984.6 bits (2544), Expect = 1.9e-283
Identity = 481/594 (80.98%), Postives = 531/594 (89.39%), Query Frame = 0
Query: 1 MAYTSAIRNCMLAVNGLYECSKQEYVGTGICHCSLGKDKSSSLHFNCLWKSSCSSSYSCH 60
MAYT ++N M+ VNG +ECSKQEY TGI C L K+K SSLH NCL KSSC SSYSCH
Sbjct: 1 MAYTLTVQNYMVTVNGQHECSKQEYASTGIGQCLLEKEKLSSLHLNCLCKSSCISSYSCH 60
Query: 61 WSATLGLGRKQQVLQCQGVQRSVCVDNVEEAYGDELVFNGHEINDERNFVEKMSKKRPGS 120
WS TLG GRKQ+VL +G+QRSVC+D V+ Y DELV NGHEI ERNF EKM+KKR S
Sbjct: 61 WSTTLGFGRKQRVLHFKGLQRSVCIDRVDNTYEDELVLNGHEIKVERNFAEKMTKKRISS 120
Query: 121 PNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIR 180
NGSSLYLDG FVGNDE+TNNEILQKFCNKGKLMEASRLVDIMA RNQIP+FH CVNLIR
Sbjct: 121 HNGSSLYLDGPFVGNDEQTNNEILQKFCNKGKLMEASRLVDIMASRNQIPDFHCCVNLIR 180
Query: 181 GFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPP 240
GFVK+DR+DKAVQ LKIMVMSGGVPDVITYNMVIGGLCK+GHLESAIELLDDMSLSGCPP
Sbjct: 181 GFVKIDRIDKAVQALKIMVMSGGVPDVITYNMVIGGLCKQGHLESAIELLDDMSLSGCPP 240
Query: 241 DVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVL 300
DVITYNAV+R M +NG +DQA++FWK+QLRKGTPPYLITYTILIELV KHRGTVRAIEVL
Sbjct: 241 DVITYNAVIRHMFDNGCFDQAIEFWKEQLRKGTPPYLITYTILIELVWKHRGTVRAIEVL 300
Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARR 360
EEMANEGCYPDLVTYNSLINLTCKQGK+ED ALVIDNL HGM P+AVTYNT+LHSL+RR
Sbjct: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDTALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360
Query: 361 GHWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLLDRAINFLSQMFTNNCLPDIITF 420
G WD VDEIL IMS LQ TVVTYNVLINGLCKNGLLD AINFL+QMF+NNCLPDIIT+
Sbjct: 361 GRWDEVDEILKIMSISLQPPTVVTYNVLINGLCKNGLLDSAINFLNQMFSNNCLPDIITY 420
Query: 421 NTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIME 480
NTLLG L+KEGMVDEAFQLLHLL G+ CSPGLISYNTV+DGLSK+GYM+KAM LY Q+ME
Sbjct: 421 NTLLGALSKEGMVDEAFQLLHLLIGSACSPGLISYNTVLDGLSKKGYMDKAMSLYSQMME 480
Query: 481 SEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDL 540
+ I+PD+ITHRS+IWGFCR+NKF E+VEIL G LKGG+KVNS+ YRFLVHELC+NKKVDL
Sbjct: 481 NGIMPDDITHRSIIWGFCRSNKFVEAVEILKGILKGGHKVNSSSYRFLVHELCINKKVDL 540
Query: 541 AIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQWKILGKEAV 595
AIQVLEMM+SS+C PN TIYSTIINSIAS+GLKEQADELRQKLI+ K+LGK+AV
Sbjct: 541 AIQVLEMMLSSQCKPNETIYSTIINSIASSGLKEQADELRQKLIELKVLGKKAV 594
BLAST of Sed0012628 vs. ExPASy TrEMBL
Match:
A0A6J1E155 (pentatricopeptide repeat-containing protein At1g08610 OS=Momordica charantia OX=3673 GN=LOC111024995 PE=4 SV=1)
HSP 1 Score: 961.4 bits (2484), Expect = 1.7e-276
Identity = 466/594 (78.45%), Postives = 527/594 (88.72%), Query Frame = 0
Query: 1 MAYTSAIRNCMLAVNGLYECSKQEYVGTGICHCSLGKDKSSSLHFNCLWKSSCSSSYSCH 60
MAYT +N + +GL+ECSKQEYV T I C + +K S+LH NCL KSSCSSSYSCH
Sbjct: 1 MAYTLTFQNYTVTAHGLHECSKQEYVSTCIAQCPM--EKPSALHLNCLCKSSCSSSYSCH 60
Query: 61 WSATLGLGRKQQVLQCQGVQRSVCVDNVEEAYGDELVFNGHEINDERNFVEKMSKKRPGS 120
WSA LGL RK +VL C+GVQRSVC+D V++AY DEL NGHE+ ERN E+M+KKR S
Sbjct: 61 WSANLGLFRKLRVLHCRGVQRSVCIDRVDDAYQDELALNGHEVKVERNLFEQMTKKRLSS 120
Query: 121 PNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIR 180
NGSSLYLDG FVGND ETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFH C+NLIR
Sbjct: 121 HNGSSLYLDGPFVGNDGETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHCCINLIR 180
Query: 181 GFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPP 240
GFVK+DR+DKAVQ LKIMVMSGGVPDVITYNMVIGGLCK+GHLESAIELLDDMSLSGCPP
Sbjct: 181 GFVKIDRLDKAVQVLKIMVMSGGVPDVITYNMVIGGLCKQGHLESAIELLDDMSLSGCPP 240
Query: 241 DVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVL 300
DVITYNAV+R MC+NG++DQAV+FWK+QLRKGTPPYLITYTILIELVCKHRGT+ AIEVL
Sbjct: 241 DVITYNAVIRCMCDNGYFDQAVEFWKEQLRKGTPPYLITYTILIELVCKHRGTLHAIEVL 300
Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARR 360
EEMA EGCYPDLVTYNSLINL CKQGK+E A LVI++L HGMEPNAVTYNT+LHSLARR
Sbjct: 301 EEMAAEGCYPDLVTYNSLINLNCKQGKFEGATLVINDLLDHGMEPNAVTYNTLLHSLARR 360
Query: 361 GHWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLLDRAINFLSQMFTNNCLPDIITF 420
G WD VDEILTIMS Q TVVTYN+LINGLCKNGLLDRAINFL+QMF+ +CLPDIIT+
Sbjct: 361 GRWDEVDEILTIMSQSFQPPTVVTYNILINGLCKNGLLDRAINFLNQMFSYHCLPDIITY 420
Query: 421 NTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIME 480
NTLLG L+KEG+VDEAFQLLHLL GT+CSPGLISYN VIDGLSK+G MEKAMRLY Q++E
Sbjct: 421 NTLLGALSKEGLVDEAFQLLHLLTGTSCSPGLISYNIVIDGLSKKGEMEKAMRLYSQMIE 480
Query: 481 SEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDL 540
+ IVPDEITHR+LIWG+CRAN+ EE+VEIL GF+K G K++S+ Y FLVHELC+N+KVDL
Sbjct: 481 NGIVPDEITHRALIWGYCRANEVEEAVEILKGFIKKGRKISSSSYTFLVHELCINEKVDL 540
Query: 541 AIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQWKILGKEAV 595
+IQVLE+M+S+RC PN TIYSTII+SIASAG K+QADELR+KLI+WK+LGKEAV
Sbjct: 541 SIQVLEVMLSARCKPNETIYSTIISSIASAGFKDQADELREKLIEWKVLGKEAV 592
BLAST of Sed0012628 vs. ExPASy TrEMBL
Match:
A0A0A0LY76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G665940 PE=4 SV=1)
HSP 1 Score: 937.2 bits (2421), Expect = 3.4e-269
Identity = 461/592 (77.87%), Postives = 514/592 (86.82%), Query Frame = 0
Query: 1 MAYTSAIRNCMLAVNGLYECSKQEYVGTGICHCSLGKDKSSSLHFNCLWKSSCSSSYSCH 60
MAY ++N M+ VNGL+ECSKQEY TGI C L K+K SSLH L K+S + SYSCH
Sbjct: 1 MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCH 60
Query: 61 WSATLGLGRKQQVLQCQGVQRSVCVDNVEEAYGDELVFNGHEINDERNFVEKMSKKRPGS 120
WS TLGLGRKQ+VL +G+QRSVC+D V++ Y DEL NGHEI ERNF EK++KKR GS
Sbjct: 61 WSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGS 120
Query: 121 PNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIR 180
N SSLYLDG FVGNDEETNN ILQKFC KGKLMEASR+VDIMA RNQIP+F C+N+IR
Sbjct: 121 HNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIR 180
Query: 181 GFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPP 240
GFV DRMDKAVQ LKIMVMSGGVPD+ITYNMVIG LCK+GHLESAIELL+DMSLSGCPP
Sbjct: 181 GFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPP 240
Query: 241 DVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVL 300
DVITYNAV+R M +NG +DQAV+FWK+QLRKGTPPYLITYTILIELV KHRGTV A+EVL
Sbjct: 241 DVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVL 300
Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARR 360
EEMANEGCYPDLVTYNSLINLTCKQGK+EDAALVIDNL HGM P+AVTYNT+LHSL+RR
Sbjct: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360
Query: 361 GHWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLLDRAINFLSQMFTNNCLPDIITF 420
GHWD VDEIL IMS LQ TVVT NVLINGLCKNGLLD AINFL+QMF+ NCLPDIIT+
Sbjct: 361 GHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITY 420
Query: 421 NTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIME 480
NTLLG L KEGMVDEAFQLLHLL T CSPGLISYNTV+DGLS++GYM+KAM LY Q+ME
Sbjct: 421 NTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMME 480
Query: 481 SEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDL 540
+ I+PD+ THRS+IWGFCR+NKF E+VE L G LKGGY+VNS+ YR LVHELC+NKKVDL
Sbjct: 481 NGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDL 540
Query: 541 AIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQWKILGKE 593
AIQVLEMM+SS C N TIYSTIINSIASAGLKEQADELRQKLI+WK+LGK+
Sbjct: 541 AIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQ 592
BLAST of Sed0012628 vs. ExPASy TrEMBL
Match:
A0A6J1JII5 (pentatricopeptide repeat-containing protein At1g08610 OS=Cucurbita maxima OX=3661 GN=LOC111485410 PE=4 SV=1)
HSP 1 Score: 918.7 bits (2373), Expect = 1.3e-263
Identity = 448/594 (75.42%), Postives = 509/594 (85.69%), Query Frame = 0
Query: 1 MAYTSAIRNCMLAVNGLYECSKQEYVGTGICHCSLGKDKSSSLHFNCLWKSSCSSSYSCH 60
MAYT ++N M+ +NGL+EC KQEYV TG C + K+K S+H +CL KSSCSSSYS H
Sbjct: 1 MAYTLTVQNYMVTLNGLHECFKQEYVSTGSGQCLMEKEKPFSVHLSCLCKSSCSSSYSYH 60
Query: 61 WSATLGLGRKQQVLQCQGVQRSVCVDNVEEAYGDELVFNGHEINDERNFVEKMSKKRPGS 120
WSAT GLGRKQ+VL+C+GVQ SVC+D V++AY DEL NGHEI RNF EKM+K R S
Sbjct: 61 WSATPGLGRKQRVLRCKGVQSSVCIDRVDDAYKDELTLNGHEIEVGRNFAEKMTKNRLSS 120
Query: 121 PNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIR 180
NGSS+Y+DG F+GNDEETNN ILQKFC GKLME+SRLVDIMA RNQIP+FH CV LIR
Sbjct: 121 HNGSSVYMDGPFIGNDEETNNMILQKFCTMGKLMESSRLVDIMACRNQIPDFHCCVKLIR 180
Query: 181 GFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPP 240
G VK+D MDKAVQ LKIMVMSGGVPDVITYNMVIGGLCK+GHLESA+ELLD+MSLSGCPP
Sbjct: 181 GLVKIDGMDKAVQVLKIMVMSGGVPDVITYNMVIGGLCKKGHLESALELLDEMSLSGCPP 240
Query: 241 DVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVL 300
DV+TYNAV+R M +NG +DQAV+FWKDQ+RKGTPPYLITYTILIELVCKH GTVRAIEVL
Sbjct: 241 DVVTYNAVIRHMFDNGCFDQAVEFWKDQIRKGTPPYLITYTILIELVCKHLGTVRAIEVL 300
Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARR 360
EEMAN GCYPD+VTYNSLIN+TCKQGKYED LVIDNL HGM P+ VTYNT+LHSL+RR
Sbjct: 301 EEMANVGCYPDIVTYNSLINVTCKQGKYEDVTLVIDNLLFHGMVPDDVTYNTLLHSLSRR 360
Query: 361 GHWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLLDRAINFLSQMFTNNCLPDIITF 420
G WD V E+LTIM+N LQ TVVTYNVLINGLCKNG LD AINFL+QMF N LPDIIT+
Sbjct: 361 GSWDEVYELLTIMNNNLQPPTVVTYNVLINGLCKNGRLDCAINFLNQMFAYNRLPDIITY 420
Query: 421 NTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIME 480
NTLL L+KE MVDEAFQLLHLL GT CSP LISYNTV++GLSK+GY+ +A LY Q+++
Sbjct: 421 NTLLDALSKEDMVDEAFQLLHLLIGTNCSPSLISYNTVLNGLSKKGYVNEATSLYNQMIQ 480
Query: 481 SEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDL 540
+ I+PD+ T RSLI GFCR+NKFEE+VEI+ GFLK GY+VNS YR+LVHELC+NKKVDL
Sbjct: 481 NGILPDDTTQRSLICGFCRSNKFEEAVEIVKGFLKEGYRVNSRSYRYLVHELCINKKVDL 540
Query: 541 AIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQWKILGKEAV 595
AIQVLEMM+SSRC PN IYSTIINSIASAGLKEQADELRQ LI+WK+LGKE V
Sbjct: 541 AIQVLEMMLSSRCKPNERIYSTIINSIASAGLKEQADELRQNLIEWKVLGKEVV 594
BLAST of Sed0012628 vs. TAIR 10
Match:
AT1G08610.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 577.4 bits (1487), Expect = 1.3e-164
Identity = 275/538 (51.12%), Postives = 378/538 (70.26%), Query Frame = 0
Query: 52 SCSSSYSCHWSATLGLGRKQQVLQCQGVQRSVCVDNVEEAYGDELVFNGHEINDERNFVE 111
SC S W +GL +K +C G+ SVC+DNV + F+ + +
Sbjct: 27 SCRKFSSLDWKQEIGL-KKDVFFRCHGLLSSVCIDNVNDHAERSSEFHHYGVGTNLRARV 86
Query: 112 KMSKKRPGSPNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPE 171
K K+ L DG NDEETNNEIL C+ GKL +A +LV++MAR NQ+P
Sbjct: 87 KPMKQ-------FGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPH 146
Query: 172 FHSCVNLIRGFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLD 231
F SC NL+RG ++D++DKA+ L++MVMSGGVPD ITYNM+IG LCK+GH+ +A+ LL+
Sbjct: 147 FPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLE 206
Query: 232 DMSLSGCPPDVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHR 291
DMSLSG PPDVITYN V+R M + G+ +QA+ FWKDQL+ G PP++ITYT+L+ELVC++
Sbjct: 207 DMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYC 266
Query: 292 GTVRAIEVLEEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYN 351
G+ RAIEVLE+MA EGCYPD+VTYNSL+N C++G E+ A VI ++ HG+E N VTYN
Sbjct: 267 GSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYN 326
Query: 352 TILHSLARRGHWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLLDRAINFLSQMFTN 411
T+LHSL +WD V+EIL IM TV+TYN+LINGLCK LL RAI+F QM
Sbjct: 327 TLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQ 386
Query: 412 NCLPDIITFNTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKA 471
CLPDI+T+NT+LG ++KEGMVD+A +LL LLK T C PGLI+YN+VIDGL+K+G M+KA
Sbjct: 387 KCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKA 446
Query: 472 MRLYGQIMESEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYRFLVHE 531
+ LY Q++++ I PD+IT RSLI+GFCRAN EE+ ++L G + + YR ++
Sbjct: 447 LELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQG 506
Query: 532 LCVNKKVDLAIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQWKIL 590
LC K++++AI+V+E+M++ C P+ TIY+ I+ + G+ +A +L++KL QWK+L
Sbjct: 507 LCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKLKQWKLL 556
BLAST of Sed0012628 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 351.3 bits (900), Expect = 1.5e-96
Identity = 184/507 (36.29%), Postives = 295/507 (58.19%), Query Frame = 0
Query: 122 NGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIRG 181
NG ++ SF D E+NN L++ G+L E + ++ M +P+ C LIRG
Sbjct: 88 NGHYSSVNSSFALEDVESNNH-LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG 147
Query: 182 FVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPPD 241
F ++ + KA + L+I+ SG VPDVITYN++I G CK G + +A+ +LD MS+S PD
Sbjct: 148 FCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PD 207
Query: 242 VITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVLE 301
V+TYN ++RS+C++G QA++ L++ P +ITYTILIE C+ G A+++L+
Sbjct: 208 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 267
Query: 302 EMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARRG 361
EM + GC PD+VTYN L+N CK+G+ ++A ++++ G +PN +T+N IL S+ G
Sbjct: 268 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 327
Query: 362 HWDGVDEILTIMSNRLQALTVVTYNVLINGLCKNGLL----------------------- 421
W +++L M + + +VVT+N+LIN LC+ GLL
Sbjct: 328 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 387
Query: 422 ------------DRAINFLSQMFTNNCLPDIITFNTLLGTLTKEGMVDEAFQLLHLLKGT 481
DRAI +L +M + C PDI+T+NT+L L K+G V++A ++L+ L
Sbjct: 388 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 447
Query: 482 TCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIMESEIVPDEITHRSLIWGFCRANKFEES 541
CSP LI+YNTVIDGL+K G KA++L ++ ++ PD IT+ SL+ G R K +E+
Sbjct: 448 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 507
Query: 542 VEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDLAIQVLEMMISSRCIPNGTIYSTIINS 594
++ + F + G + N+ + ++ LC +++ D AI L MI+ C PN T Y+ +I
Sbjct: 508 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 567
BLAST of Sed0012628 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 285.0 bits (728), Expect = 1.4e-76
Identity = 155/479 (32.36%), Postives = 245/479 (51.15%), Query Frame = 0
Query: 142 EILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIRGFVKMDRMDKAVQTLKIMVMS 201
+I + C G +E+ L++ M R+ P+ C LI+GF + + KAV+ ++I+
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL-EK 153
Query: 202 GGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPPDVITYNAVVRSMCENGHYDQA 261
G PDV YN +I G CK ++ A +LD M PD +TYN ++ S+C G D A
Sbjct: 154 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 213
Query: 262 VDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVLEEMANEGCYPDLVTYNSLINL 321
+ L P +ITYTILIE G A+++++EM + G PD+ TYN++I
Sbjct: 214 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 273
Query: 322 TCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARRGHWDGVDEILTIMSNRLQALT 381
CK+G + A ++ NL + G EP+ ++YN +L +L +G W+ ++++T M +
Sbjct: 274 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 333
Query: 382 VVTYNVLINGLCKN-----------------------------------GLLDRAINFLS 441
VVTY++LI LC++ G LD AI FL
Sbjct: 334 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 393
Query: 442 QMFTNNCLPDIITFNTLLGTLTKEGMVDEAFQLLHLLKGTTCSPGLISYNTVIDGLSKQG 501
M ++ CLPDI+ +NT+L TL K G D+A ++ L CSP SYNT+ L G
Sbjct: 394 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 453
Query: 502 YMEKAMRLYGQIMESEIVPDEITHRSLIWGFCRANKFEESVEILNGFLKGGYKVNSNCYR 561
+A+ + ++M + I PDEIT+ S+I CR +E+ E+L + + Y
Sbjct: 454 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 513
Query: 562 FLVHELCVNKKVDLAIQVLEMMISSRCIPNGTIYSTIINSIASAGLKEQADELRQKLIQ 586
++ C +++ AI VLE M+ + C PN T Y+ +I I AG + +A EL L++
Sbjct: 514 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
BLAST of Sed0012628 vs. TAIR 10
Match:
AT1G63080.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 236.9 bits (603), Expect = 4.2e-62
Identity = 131/452 (28.98%), Postives = 226/452 (50.00%), Query Frame = 0
Query: 139 TNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLIRGFVKMDRMDKAVQTLKIM 198
T N +L FC+ ++ EA LVD M P+ + L+ G + ++ +AV ++ M
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
Query: 199 VMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCPPDVITYNAVVRSMCENGHY 258
V+ G PD++TY VI GLCKRG + A+ LL+ M DV+ Y+ V+ S+C+ H
Sbjct: 197 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV 256
Query: 259 DQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEVLEEMANEGCYPDLVTYNSL 318
D A++ + + KG P + TY+ LI +C + A +L +M P++VT+NSL
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 319 INLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLARRGHWDGVDEILTIMSNRLQ 378
I+ K+GK +A + D + ++PN VTYN++++ D +I T+M ++
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 379 ALTVVTYNVLINGLCKNGLLDRAINFLSQMFTNNCLPDIITFNTLLGTLTKEGMVDEAFQ 438
VVTYN LING CK + + M + + +T+ TL+ + D A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 439 LLHLLKGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIMESEIVPDEITHRSLIWGFC 498
+ + P +++YNT++DGL K G +EKAM ++ + +S++ PD T+ + G C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 499 RANKFEESVEILNGFLKGGYKVNSNCYRFLVHELCVNKKVDLAIQVLEMMISSRCIPNGT 558
+A K E+ ++ G K + Y ++ C + A + M +P+
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 559 IYSTIINSIASAGLKEQADELRQKLIQWKILG 591
Y+T+I + G K + EL +++ + G
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMRSCRFAG 588
BLAST of Sed0012628 vs. TAIR 10
Match:
AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 233.4 bits (594), Expect = 4.7e-61
Identity = 146/515 (28.35%), Postives = 250/515 (48.54%), Query Frame = 0
Query: 120 SPNGSSLYLDGSFVGNDEETNNEILQKFCNKGKLMEASRLVDIMARRNQIPEFHSCVNLI 179
SP S+ + GS D ++ + ++ L ++ ++ + P L+
Sbjct: 54 SPKDSAFTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLL 113
Query: 180 RGFVKMDRMDKAVQTLKIMVMSGGVPDVITYNMVIGGLCKRGHLESAIELLDDMSLSGCP 239
K +R+ KA++ +++MV SG +PD Y ++ LCKRG++ A++L++ M G P
Sbjct: 114 YDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYP 173
Query: 240 PDVITYNAVVRSMCENGHYDQAVDFWKDQLRKGTPPYLITYTILIELVCKHRGTVRAIEV 299
+ +TYNA+VR +C G +Q++ F + ++KG P TY+ L+E K RGT A+++
Sbjct: 174 SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKL 233
Query: 300 LEEMANEGCYPDLVTYNSLINLTCKQGKYEDAALVIDNLFIHGMEPNAVTYNTILHSLAR 359
L+E+ +G P+LV+YN L+ CK+G+ +DA + L G + N V+YN +L L
Sbjct: 234 LDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCC 293
Query: 360 RGHWDGVDEILTIMSNRLQALTVVTYNVLING---------------------------- 419
G W+ + +L M +A +VVTYN+LIN
Sbjct: 294 DGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTA 353
Query: 420 ---------LCKNGLLDRAINFLSQMFTNNCLPDIITFNTLLGTLTKEGMVDEAFQLLHL 479
LCK G +D + L +M C P+ T+N + V EAF ++
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQS 413
Query: 480 L--KGTTCSPGLISYNTVIDGLSKQGYMEKAMRLYGQIMESEIVPDEITHRSLIWGFCRA 539
L K C+ Y +VI L ++G A +L ++ PD T+ +LI G C
Sbjct: 414 LSNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLE 473
Query: 540 NKFEESVEILNGFLKG-GYKVNSNCYRFLVHELCVNKKVDLAIQVLEMMISSRCIPNGTI 595
F ++E+L+ + K + + ++ LC ++ DLA++V EMM+ + +PN T
Sbjct: 474 GMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETT 533
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038880487.1 | 4.8e-286 | 81.14 | pentatricopeptide repeat-containing protein At1g08610 [Benincasa hispida] >XP_03... | [more] |
KAA0038403.1 | 2.9e-283 | 80.98 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ96989... | [more] |
XP_008443760.1 | 3.8e-283 | 80.98 | PREDICTED: pentatricopeptide repeat-containing protein At1g08610 [Cucumis melo] | [more] |
XP_022158526.1 | 3.5e-276 | 78.45 | pentatricopeptide repeat-containing protein At1g08610 [Momordica charantia] >XP_... | [more] |
XP_004142592.1 | 7.0e-269 | 77.87 | pentatricopeptide repeat-containing protein At1g08610 [Cucumis sativus] >KGN6673... | [more] |
Match Name | E-value | Identity | Description | |
Q9FRS4 | 1.9e-163 | 51.12 | Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX... | [more] |
Q3EDF8 | 2.2e-95 | 36.29 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
Q9SR00 | 1.9e-75 | 32.36 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
Q9CAN5 | 5.9e-61 | 28.98 | Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidop... | [more] |
A3KPF8 | 6.6e-60 | 28.35 | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7T640 | 1.4e-283 | 80.98 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3B8B2 | 1.9e-283 | 80.98 | pentatricopeptide repeat-containing protein At1g08610 OS=Cucumis melo OX=3656 GN... | [more] |
A0A6J1E155 | 1.7e-276 | 78.45 | pentatricopeptide repeat-containing protein At1g08610 OS=Momordica charantia OX=... | [more] |
A0A0A0LY76 | 3.4e-269 | 77.87 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G665940 PE=4 SV=1 | [more] |
A0A6J1JII5 | 1.3e-263 | 75.42 | pentatricopeptide repeat-containing protein At1g08610 OS=Cucurbita maxima OX=366... | [more] |
Match Name | E-value | Identity | Description | |
AT1G08610.1 | 1.3e-164 | 51.12 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G09900.1 | 1.5e-96 | 36.29 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G04760.1 | 1.4e-76 | 32.36 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G63080.1 | 4.2e-62 | 28.98 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G79080.1 | 4.7e-61 | 28.35 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |