Sed0012620 (gene) Chayote v1

Overview


Name	Sed0012620
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Peptidyl-prolyl cis-trans isomerase
Location	LG04: 46971720 .. 46972729 (-)
RNA-Seq Expression	Sed0012620
Synteny	Sed0012620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCAAAGCAGTTTTCTTCTTCGGCGAGAAATTTCAAACTCCGAGAATTCAAAATGCCAAACCCTAAAGTCTTCTTCGATATGACGATCGGCAGCCAACCGGCCGGCCGGATCGTGATGGAGCTGTTCGCCGACGTCACTCCCCGCACCGCCGAGAACTTCCGTGCACTGTGCACCGGCGAGAAAGGAAACGGCCGGAGCGGAAAGCCCCTTCATTACAAGGGATCGTCGTTTCACCGCGTGATTCCTCAATTCATGTGCCAGGGAGGCGATTTCACCGCCGGGAACGGTACCGGAGGCGAGTCGATCTACGGCGCGAAGTTCGCCGATGAGAACTTCATCAAGAAGCACACTGGACCTGGAATCCTGTCCATGGCGAATTCCGGACCTGGAACCAACGGATCTCAGTTCTTCATCTGCACCGTGAAGACCGAATGGCTCGATGGAAAGCATGTTGTGTTCGGACAAATCGTGGAGGGCATGGACGTTGTGAAGGCCATTGAGAAGGTCGGGTCGGGGTCTGGAAAGACCTCGCAGAAGGTTATGATTGCCGATTGTGGTCAGATCTCTTAGATCGCCGGTGAAATCGTATCTTCCATCATTTCCTATTTGCCTGTGTGTTGCTTTTTTATAACTTGCTGCGAATATGGGTCTGTATGTTTCTCTTTTTATGTCCAACTGCTGTTTAGACCTCTCCGTTGAACGGCGGTTTCTTAGACCTTCAATAATATGGCTATCTTTAATTTCCATAAAGCTCTGATCCCCCTCTTTTAATATTCAAAATAAGCATTTTCAATCCTTTTCTTCACAGGCTATGGAGGATGATAATGGGTTTACCTTTGACCATATAATTTGTTAATCTAATTGCATTGGAATTACTAATTGGGATGTTGCTGTTGTTTAACTTAGCTAAAAAGGATCATGGGTCTTTCTATTTAATCTGTTGGAGTTGATATTAGATTTGTTTTGTTTGTTGGCTTTGTCTGACAGATTGATTAAGATGAATATGCT

mRNA sequence

AATCAAAGCAGTTTTCTTCTTCGGCGAGAAATTTCAAACTCCGAGAATTCAAAATGCCAAACCCTAAAGTCTTCTTCGATATGACGATCGGCAGCCAACCGGCCGGCCGGATCGTGATGGAGCTGTTCGCCGACGTCACTCCCCGCACCGCCGAGAACTTCCGTGCACTGTGCACCGGCGAGAAAGGAAACGGCCGGAGCGGAAAGCCCCTTCATTACAAGGGATCGTCGTTTCACCGCGTGATTCCTCAATTCATGTGCCAGGGAGGCGATTTCACCGCCGGGAACGGTACCGGAGGCGAGTCGATCTACGGCGCGAAGTTCGCCGATGAGAACTTCATCAAGAAGCACACTGGACCTGGAATCCTGTCCATGGCGAATTCCGGACCTGGAACCAACGGATCTCAGTTCTTCATCTGCACCGTGAAGACCGAATGGCTCGATGGAAAGCATGTTGTGTTCGGACAAATCGTGGAGGGCATGGACGTTGTGAAGGCCATTGAGAAGGTCGGGTCGGGGTCTGGAAAGACCTCGCAGAAGGTTATGATTGCCGATTGTGGTCAGATCTCTTAGATCGCCGGTGAAATCGTATCTTCCATCATTTCCTATTTGCCTGTGTGTTGCTTTTTTATAACTTGCTGCGAATATGGGTCTGTATGTTTCTCTTTTTATGTCCAACTGCTGTTTAGACCTCTCCGTTGAACGGCGGTTTCTTAGACCTTCAATAATATGGCTATCTTTAATTTCCATAAAGCTCTGATCCCCCTCTTTTAATATTCAAAATAAGCATTTTCAATCCTTTTCTTCACAGGCTATGGAGGATGATAATGGGTTTACCTTTGACCATATAATTTGTTAATCTAATTGCATTGGAATTACTAATTGGGATGTTGCTGTTGTTTAACTTAGCTAAAAAGGATCATGGGTCTTTCTATTTAATCTGTTGGAGTTGATATTAGATTTGTTTTGTTTGTTGGCTTTGTCTGACAGATTGATTAAGATGAATATGCT

Coding sequence (CDS)

ATGCCAAACCCTAAAGTCTTCTTCGATATGACGATCGGCAGCCAACCGGCCGGCCGGATCGTGATGGAGCTGTTCGCCGACGTCACTCCCCGCACCGCCGAGAACTTCCGTGCACTGTGCACCGGCGAGAAAGGAAACGGCCGGAGCGGAAAGCCCCTTCATTACAAGGGATCGTCGTTTCACCGCGTGATTCCTCAATTCATGTGCCAGGGAGGCGATTTCACCGCCGGGAACGGTACCGGAGGCGAGTCGATCTACGGCGCGAAGTTCGCCGATGAGAACTTCATCAAGAAGCACACTGGACCTGGAATCCTGTCCATGGCGAATTCCGGACCTGGAACCAACGGATCTCAGTTCTTCATCTGCACCGTGAAGACCGAATGGCTCGATGGAAAGCATGTTGTGTTCGGACAAATCGTGGAGGGCATGGACGTTGTGAAGGCCATTGAGAAGGTCGGGTCGGGGTCTGGAAAGACCTCGCAGAAGGTTATGATTGCCGATTGTGGTCAGATCTCTTAG

Protein sequence

MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSFHRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFFICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS

Homology

[Close]

BLAST of Sed0012620 vs. NCBI nr
Match: XP_038888644.1 (peptidyl-prolyl cis-trans isomerase [Benincasa hispida])

HSP 1 Score: 337.0 bits (863), Expect = 9.3e-89
Identity = 156/172 (90.70%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           MPNP+VFFDMT+G QPAGRIVMELFADVTPRTAENFRALCTGEKG GRSGKPLHYKGSSF
Sbjct: 1   MPNPRVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMAN+GPGTNGSQFF
Sbjct: 61  HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           ICT KTEWLDGKHVVFGQ++EGMDVVKA+EKVGS SG+TS+ V+IADCGQ+S
Sbjct: 121 ICTAKTEWLDGKHVVFGQVIEGMDVVKAVEKVGSSSGRTSKAVVIADCGQLS 172

[Close]

BLAST of Sed0012620 vs. NCBI nr
Match: NP_001276071.1 (Peptidyl-prolyl cis-trans isomerase-like [Citrus sinensis] >XP_006423607.1 peptidyl-prolyl cis-trans isomerase [Citrus clementina] >ACX37092.1 cyclophilin [Citrus sinensis] >ESR36847.1 hypothetical protein CICLE_v10029386mg [Citrus clementina] >PHT24520.1 Peptidyl-prolyl cis-trans isomerase [Capsicum baccatum])

HSP 1 Score: 334.0 bits (855), Expect = 7.9e-88
Identity = 154/172 (89.53%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           MPNPKVFFDMT+G QPAGRIVMELFADVTPRTAENFRALCTGEKG G+SGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYG+KFADENF+KKHTGPGILSMAN+GPGTNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           +CT KTEWLDGKHVVFGQ+VEGMDVVKAIEKVGS SG+T++ V+IADCGQ+S
Sbjct: 121 VCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 172

[Close]

BLAST of Sed0012620 vs. NCBI nr
Match: BAQ21277.1 (cyclophilin [Citrus tamurana] >GAY67145.1 hypothetical protein CUMW_254230 [Citrus unshiu])

HSP 1 Score: 334.0 bits (855), Expect = 7.9e-88
Identity = 154/172 (89.53%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           MPNPKVFFDMT+G QPAGRIVMELFADVTPRTAENFRALCTGEKG G+SGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYG+KFADENF+KKHTGPGILSMAN+GPGTNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           +CT KTEWLDGKHVVFGQ+VEGMDVVKAIEKVGS SG+T++ V+IADCGQ+S
Sbjct: 121 VCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 172

[Close]

BLAST of Sed0012620 vs. NCBI nr
Match: 4JJM_A (Structure of a cyclophilin from Citrus sinensis (CsCyp) in complex with cyclosporin A [Citrus sinensis] >4JJM_B Structure of a cyclophilin from Citrus sinensis (CsCyp) in complex with cyclosporin A [Citrus sinensis])

HSP 1 Score: 334.0 bits (855), Expect = 7.9e-88
Identity = 154/172 (89.53%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           MPNPKVFFDMT+G QPAGRIVMELFADVTPRTAENFRALCTGEKG G+SGKPLHYKGSSF
Sbjct: 4   MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSF 63

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYG+KFADENF+KKHTGPGILSMAN+GPGTNGSQFF
Sbjct: 64  HRVIPGFMCQGGDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFF 123

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           +CT KTEWLDGKHVVFGQ+VEGMDVVKAIEKVGS SG+T++ V+IADCGQ+S
Sbjct: 124 VCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 175

[Close]

BLAST of Sed0012620 vs. NCBI nr
Match: KAG5247885.1 (Peptidyl-prolyl cis-trans isomerase [Salix suchowensis])

HSP 1 Score: 334.0 bits (855), Expect = 7.9e-88
Identity = 154/172 (89.53%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           MPNPKVFFDM++G QPAGRIVMELFAD+ PRTAENFRALCTGEKG G+SGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMSVGGQPAGRIVMELFADIVPRTAENFRALCTGEKGVGKSGKPLHYKGSSF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYGAKFADENF KKHTGPG+LSMANSGPGTNGSQFF
Sbjct: 61  HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFAKKHTGPGVLSMANSGPGTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           ICTVKTEWLDGKHVVFGQ+VEGMDVVK IEKVGSG+G+TS+ V+IADCGQ+S
Sbjct: 121 ICTVKTEWLDGKHVVFGQVVEGMDVVKGIEKVGSGNGRTSKPVVIADCGQLS 172

[Close]

BLAST of Sed0012620 vs. ExPASy Swiss-Prot
Match: Q39613 (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus OX=4058 GN=PCKR1 PE=1 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 3.3e-89
Identity = 152/172 (88.37%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           MPNP+VFFDM++G QPAGRIVMELFAD TPRTAENFRALCTGEKG GRSGKPLHYK SSF
Sbjct: 1   MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMAN+GP TNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           ICT KTEWLDGKHVVFGQ+VEGMDVVKAIEKVGS SG+T++KV++ DCGQ+S
Sbjct: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172

[Close]

BLAST of Sed0012620 vs. ExPASy Swiss-Prot
Match: Q8W171 (Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 1.7e-88
Identity = 153/172 (88.95%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           MPNPKVFFDMTIG Q AGRIVMEL+ADVTPRTAENFRALCTGEKG GRSGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMTIGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYGAKFADENF+KKHTGPGILSMAN+GPGTNGSQFF
Sbjct: 61  HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           ICT KTEWLDGKHVVFGQ++EG++VVK IEKVGSGSG+TS+ V+IA+CGQ S
Sbjct: 121 ICTEKTEWLDGKHVVFGQVIEGLNVVKDIEKVGSGSGRTSKPVVIANCGQPS 172

[Close]

BLAST of Sed0012620 vs. ExPASy Swiss-Prot
Match: O49886 (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus OX=3873 PE=2 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 8.5e-85
Identity = 147/172 (85.47%), Postives = 158/172 (91.86%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           M NPKVFFDM I   PAGRIVMEL+AD TPRTAENFRALCTGEKG GRSGKPLHYKGS+F
Sbjct: 1   MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTG ESIYGAKFADENFIK+HTGPGILSMAN+G GTNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           ICT KTEWLDGKHVVFG+++EGM+VV+ IEKVGSGSGKTS+ V IADCGQ+S
Sbjct: 121 ICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172

[Close]

BLAST of Sed0012620 vs. ExPASy Swiss-Prot
Match: P21568 (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum OX=4081 GN=CYP PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 1.6e-83
Identity = 142/171 (83.04%), Postives = 156/171 (91.23%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           M NPKVFFD+TIG  PAGR+VMELFAD TP+TAENFRALCTGEKG G+ GKPLHYKGS+F
Sbjct: 1   MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYGAKF DENF+KKHTGPGILSMAN+GPGTNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQI 172
           ICT KTEWL+GKHVVFGQ+VEGMDV+K  E VGS SG+ S+ V+IADCGQ+
Sbjct: 121 ICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171

[Close]

BLAST of Sed0012620 vs. ExPASy Swiss-Prot
Match: Q9SKQ0 (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana OX=3702 GN=CYP19-2 PE=2 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 6.7e-82
Identity = 141/170 (82.94%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 3   NPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSFHR 62
           +PKVFFDMTIG  PAG+IVMEL+ D TP+TAENFRALCTGEKG GRSGKPLH+KGSSFHR
Sbjct: 4   HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHR 63

Query: 63  VIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFFIC 122
           VIP FMCQGGDFT GNGTGGESIYGAKF DENF +KHTGPGILSMAN+G  TNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFIC 123

Query: 123 TVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           TVKT+WLDGKHVVFGQ+VEG+DVVKAIEK+GS SGK ++ V+IADCG+IS
Sbjct: 124 TVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173

[Close]

BLAST of Sed0012620 vs. ExPASy TrEMBL
Match: A0A6N2MDR8 (Peptidyl-prolyl cis-trans isomerase OS=Salix viminalis OX=40686 GN=SVIM_LOCUS242144 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88
Identity = 154/172 (89.53%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           MPNPKVFFDM++G QPAGRIVMELFAD+ PRTAENFRALCTGEKG G+SGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMSVGGQPAGRIVMELFADIVPRTAENFRALCTGEKGVGKSGKPLHYKGSSF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYGAKFADENF KKHTGPG+LSMANSGPGTNGSQFF
Sbjct: 61  HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFAKKHTGPGVLSMANSGPGTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           ICTVKTEWLDGKHVVFGQ+VEGMDVVK IEKVGSG+G+TS+ V+IADCGQ+S
Sbjct: 121 ICTVKTEWLDGKHVVFGQVVEGMDVVKGIEKVGSGNGRTSKPVVIADCGQLS 172

[Close]

BLAST of Sed0012620 vs. ExPASy TrEMBL
Match: A0A2G2UUW3 (Peptidyl-prolyl cis-trans isomerase OS=Capsicum baccatum OX=33114 GN=CQW23_35763 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88
Identity = 154/172 (89.53%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           MPNPKVFFDMT+G QPAGRIVMELFADVTPRTAENFRALCTGEKG G+SGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYG+KFADENF+KKHTGPGILSMAN+GPGTNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           +CT KTEWLDGKHVVFGQ+VEGMDVVKAIEKVGS SG+T++ V+IADCGQ+S
Sbjct: 121 VCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 172

[Close]

BLAST of Sed0012620 vs. ExPASy TrEMBL
Match: D0ELH5 (Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis OX=2711 GN=CYP PE=1 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88
Identity = 154/172 (89.53%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           MPNPKVFFDMT+G QPAGRIVMELFADVTPRTAENFRALCTGEKG G+SGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYG+KFADENF+KKHTGPGILSMAN+GPGTNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           +CT KTEWLDGKHVVFGQ+VEGMDVVKAIEKVGS SG+T++ V+IADCGQ+S
Sbjct: 121 VCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 172

[Close]

BLAST of Sed0012620 vs. ExPASy TrEMBL
Match: V4S8T3 (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina OX=85681 GN=CICLE_v10029386mg PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88
Identity = 154/172 (89.53%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           MPNPKVFFDMT+G QPAGRIVMELFADVTPRTAENFRALCTGEKG G+SGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYG+KFADENF+KKHTGPGILSMAN+GPGTNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           +CT KTEWLDGKHVVFGQ+VEGMDVVKAIEKVGS SG+T++ V+IADCGQ+S
Sbjct: 121 VCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 172

[Close]

BLAST of Sed0012620 vs. ExPASy TrEMBL
Match: A0A2H5QS95 (Peptidyl-prolyl cis-trans isomerase OS=Citrus unshiu OX=55188 GN=CUMW_254230 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88
Identity = 154/172 (89.53%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           MPNPKVFFDMT+G QPAGRIVMELFADVTPRTAENFRALCTGEKG G+SGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYG+KFADENF+KKHTGPGILSMAN+GPGTNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           +CT KTEWLDGKHVVFGQ+VEGMDVVKAIEKVGS SG+T++ V+IADCGQ+S
Sbjct: 121 VCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 172

[Close]

BLAST of Sed0012620 vs. TAIR 10
Match: AT2G21130.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 304.7 bits (779), Expect = 4.8e-83
Identity = 141/170 (82.94%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 3   NPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSFHR 62
           +PKVFFDMTIG  PAG+IVMEL+ D TP+TAENFRALCTGEKG GRSGKPLH+KGSSFHR
Sbjct: 4   HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHR 63

Query: 63  VIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFFIC 122
           VIP FMCQGGDFT GNGTGGESIYGAKF DENF +KHTGPGILSMAN+G  TNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFIC 123

Query: 123 TVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           TVKT+WLDGKHVVFGQ+VEG+DVVKAIEK+GS SGK ++ V+IADCG+IS
Sbjct: 124 TVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173

[Close]

BLAST of Sed0012620 vs. TAIR 10
Match: AT2G16600.1 (rotamase CYP 3 )

HSP 1 Score: 303.1 bits (775), Expect = 1.4e-82
Identity = 140/170 (82.35%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 3   NPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSFHR 62
           NPKV+FDMT+G + AGRIVMEL+AD TP TAENFRALCTGE+G G+ GKPLHYKGSSFHR
Sbjct: 4   NPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHR 63

Query: 63  VIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFFIC 122
           VIP+FMCQGGDFTAGNGTGGESIYG+KF DENFIKKHTGPGILSMAN+G  TNGSQFFIC
Sbjct: 64  VIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFIC 123

Query: 123 TVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           T KT WLDGKHVVFGQ+VEG++VV+ IEKVGS SG+TS+ V+IADCGQIS
Sbjct: 124 TEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173

[Close]

BLAST of Sed0012620 vs. TAIR 10
Match: AT4G38740.1 (rotamase CYP 1 )

HSP 1 Score: 301.2 bits (770), Expect = 5.3e-82
Identity = 140/172 (81.40%), Postives = 155/172 (90.12%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           M  PKV+FDMTI  QPAGRIVMEL+ D TPRTAENFRALCTGEKG G +GKPLH+KGS F
Sbjct: 1   MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYG+KF DENF +KHTGPGILSMAN+G  TNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           ICTVKT+WLDGKHVVFGQ+VEG+DVVKAIEKVGS SGK ++ V++ADCGQ+S
Sbjct: 121 ICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172

[Close]

BLAST of Sed0012620 vs. TAIR 10
Match: AT4G34870.1 (rotamase cyclophilin 5 )

HSP 1 Score: 295.8 bits (756), Expect = 2.2e-80
Identity = 140/172 (81.40%), Postives = 150/172 (87.21%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           M NP+VFFDM++   P GRI MELFAD TP TAENFRALCTGEKG G+ GKPLH+KGS F
Sbjct: 1   MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HRVIP FMCQGGDFTA NGTGGESIYGAKF DENFIKKHTG GILSMANSGP TNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQIS 173
           ICT KT WLDGKHVVFGQ+V+G+DVVKAIEKVGS SGKTS+ V I DCGQ+S
Sbjct: 121 ICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172

[Close]

BLAST of Sed0012620 vs. TAIR 10
Match: AT3G56070.1 (rotamase cyclophilin 2 )

HSP 1 Score: 282.7 bits (722), Expect = 1.9e-76
Identity = 130/171 (76.02%), Postives = 147/171 (85.96%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGSQPAGRIVMELFADVTPRTAENFRALCTGEKGNGRSGKPLHYKGSSF 60
           M NPKVFFD+ IG   AGR+VMELFADVTPRTA NFRALCTGE G G++GK LHYKGS+F
Sbjct: 1   MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60

Query: 61  HRVIPQFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANSGPGTNGSQFF 120
           HR+IP FMCQGGDFT GNGTGGESIYG+KF DENF  KHTGPGILSMANSGP TNGSQFF
Sbjct: 61  HRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFF 120

Query: 121 ICTVKTEWLDGKHVVFGQIVEGMDVVKAIEKVGSGSGKTSQKVMIADCGQI 172
           ICT KT WLDGKHVVFG++V+G +VVKA+E VGS  G  S++V+I DCG++
Sbjct: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171

The following BLAST results are available for this feature:

BLAST of Sed0012620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888644.1	9.3e-89	90.70	peptidyl-prolyl cis-trans isomerase [Benincasa hispida]	[more]
NP_001276071.1	7.9e-88	89.53	Peptidyl-prolyl cis-trans isomerase-like [Citrus sinensis] >XP_006423607.1 pepti...	[more]
BAQ21277.1	7.9e-88	89.53	cyclophilin [Citrus tamurana] >GAY67145.1 hypothetical protein CUMW_254230 [Citr...	[more]
4JJM_A	7.9e-88	89.53	Structure of a cyclophilin from Citrus sinensis (CsCyp) in complex with cyclospo...	[more]
KAG5247885.1	7.9e-88	89.53	Peptidyl-prolyl cis-trans isomerase [Salix suchowensis]	[more]

BLAST of Sed0012620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39613	3.3e-89	88.37	Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus OX=4058 GN=PCKR1 PE=1...	[more]
Q8W171	1.7e-88	88.95	Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1	[more]
O49886	8.5e-85	85.47	Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus OX=3873 PE=2 SV=1	[more]
P21568	1.6e-83	83.04	Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum OX=4081 GN=CYP PE=2 ...	[more]
Q9SKQ0	6.7e-82	82.94	Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of Sed0012620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6N2MDR8	3.8e-88	89.53	Peptidyl-prolyl cis-trans isomerase OS=Salix viminalis OX=40686 GN=SVIM_LOCUS242...	[more]
A0A2G2UUW3	3.8e-88	89.53	Peptidyl-prolyl cis-trans isomerase OS=Capsicum baccatum OX=33114 GN=CQW23_35763...	[more]
D0ELH5	3.8e-88	89.53	Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis OX=2711 GN=CYP PE=1 SV=1	[more]
V4S8T3	3.8e-88	89.53	Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina OX=85681 GN=CICLE_v1002...	[more]
A0A2H5QS95	3.8e-88	89.53	Peptidyl-prolyl cis-trans isomerase OS=Citrus unshiu OX=55188 GN=CUMW_254230 PE=...	[more]

BLAST of Sed0012620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21130.1	4.8e-83	82.94	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT2G16600.1	1.4e-82	82.35	rotamase CYP 3	[more]
AT4G38740.1	5.3e-82	81.40	rotamase CYP 1	[more]
AT4G34870.1	2.2e-80	81.40	rotamase cyclophilin 5	[more]
AT3G56070.1	1.9e-76	76.02	rotamase cyclophilin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 118..130 score: 71.08 coord: 24..39 score: 64.0 coord: 60..72 score: 80.08 coord: 131..146 score: 67.39 coord: 103..118 score: 77.42
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 8..169 e-value: 1.1E-49 score: 168.7
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50072	CSA_PPIASE_2	coord: 7..170 score: 45.53989
IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	PIRSF	PIRSF001467	Peptidylpro_ismrse	coord: 1..172 e-value: 1.7E-80 score: 266.8
IPR029000	Cyclophilin-like domain superfamily	GENE3D	2.40.100.10		coord: 1..172 e-value: 3.0E-85 score: 287.1
IPR029000	Cyclophilin-like domain superfamily	SUPERFAMILY	50891	Cyclophilin-like	coord: 2..171
None	No IPR available	PANTHER	PTHR11071:SF486	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 3..171
None	No IPR available	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 3..171
None	No IPR available	CDD	cd01926	cyclophilin_ABH_like	coord: 4..169 e-value: 5.62591E-121 score: 336.151
IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	PROSITE	PS00170	CSA_PPIASE_1	coord: 55..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012620.1	Sed0012620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity