Sed0012601 (gene) Chayote v1

Overview


Name	Sed0012601
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ubiquitin-like domain-containing protein
Location	LG11: 4462120 .. 4466750 (+)
RNA-Seq Expression	Sed0012601
Synteny	Sed0012601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCAACTCAGAATTTCCAATTGTTTAATTAAAAAAGAAAAGAAAAAAAAAAGGAGAAATATGATTCTTAACCGAGGTGGGATTAGTCCAACCGAGTCTCCAAACGCTATGCGTACATTCCTTGTCATTTCATCGCGATGAACTGAACGAACTTTCCCAAGCAAGAGAAATCTCGCCGATTTCAGGTTAGAATTCAAAGCAATCGACTCCCAAAATCAACAATCAACTCCCAAAATCAACAATCAACAATCAACAATCGCATGTTTCATGTTTTTTCTGAATCGAAATAGGAATTTTCTGTTTTCATCTCGACTCATTGTTGGTGTTTATCTGTATAATTAGATTGCGTATGTTTGATTTTAGGAAATTTCTTGTGTTCTATCCATTCTTTCTTGAATTCACGAATTGTGGACTTCAAGCTCTGTATTGATTTGTTGCTGGCATTATGTTCTATATAATTTGGCCAAGTGGTTAAAGTTGGCTTTGGGGATTTAAGAGATTATATGTTCAATTCATGGTGACCACCGACCTAATAATGAATTTTCTAGGGCTTTCCATAAGCCAAATGTTGTAGGGTTATATGTTGTTAGTAGAATAGTCGATGTTGAGATATACCTTGAACACACCAATGCCCTGCGATTAGTAGTTGGCGATCTCGCTGCCGAGTCAGCAAATGGGGATGTGGGGGTATCACCCCCATTGCGGAAACGCATTCCGCATCTCGCATGCGTTTTCACATCTGTTTTTTCTTAGCGCATCCCGCTTGCAGCGCATTGATGCAATGTGTTCCACATGCTTATGCGTATGCACATCCACATTCTATAATAGGGTTTAATGAGAGTGCATATATAAACTCGAATTGAACCCTAGCCGTAATATGACGTTCATTTTGTAACTCTGTAATTCGCTTCTCCTTAATAAAATTGTTTTCCATCTTTGCTCGTGGACTAGCTAACATAACGTTAGTGAACCACATAAATCCGTGTGTGTTCTTATTTCTTCTTCTTTTGCGTTTATCGTTATCTGTTTTCATATCTCCATATCGCTTGTGGATTACCGTTTTCATAACAGTCGAGATGCACGTAAGCTGACAGATATCAAAAAAAGAAAAAAAAAAGGTTTTGTATACGCGATTATTTTCCTCATGGAGCTTATAAATAGTTTTAAATTTCACTTACAAGATGAGAATATGATATATGTGTTTCTTATAAAATGTGCAATGTGATGAATTGGATGAATGCTTGTGAATTTCAGACGGCAGCAGTGGAGGCAGGATATATCGAAGTGTTGATCCATTAGTTCTTTTTTCAAGATGGTGAGTAGTTCAAATCTCACTTTTTCTTCTTCTGTGTTTGAATTTGCTACAATACTTCCATTGTAATTTCTTAGGTTTAGTTGGTTCAGTCTACAAGTATGGAGAGCTCAAAGAAGGCCAGTCATAAAATTGTTTTTCTCATCTGAAGTATACTTCTATTGTTTTTGAGCTTGTGCTGAATAAGTAGCGATTATTATTATCTTGTTTTGAACCATCATGTGGTGGCTCAATTTGTCAAAGAGGGCCTTGGGGTGCATAAGGTGATGGGTTCAATCCCCATGGTGACCACCTACCTAGGAATTAATTTCCTATGAGTTTCCTTAGCATCCAAATGTTGTAGGGTCAGGCGGCATGCCCCGTCACAATAGTCGAGGTGCACGCAAGCTGGCCCGGACAGTCACGGATATCAAAAAAAAAAAAAAAATCTTGTTTGAAGTTTTACCTTGTAATTACCTATGTCATAAGTTTCAGGTGAAATTATTTGCACAAGAATGGTAGGTTCATGATGTGTAAGGTAGAAAACTAGTATGTTCTTGTTATTCTTGTAAGCATAAGTTCAACAGTAGAACCATCTATCAGAATGCTTGTTTCCCTGGCCATTGGATTGTTTGATTAAATGCTGAGAATTCAACTCCTGTCACTAGTTAGATTAGACCCACAAAGGATATTTGGAAGCTGTGGTATTTAGATTCTAAAATTGGCCTCTTTTTTTTGTTTTTTGTTTTTCTATTTATCTGTTAGTCCATCTCAGAAATTTGGGGAAAATTTCCAGTATTCTCAAATTTAAGGGATGAGAAACAGCTACTTGGTCATGGTTAGCTGCTGTAGGTGATTTGATGTATTGGATATGGTTGATAAAAATTGATATTTTTTATCTCTGAACAATTTAGATGGGATTTTTAGAAGGTAGTAGAAAAATTCTAGGGTGGGAAGAAATGAGAAACCAGTTAAGAAAGTCATGCTGTTTCTTTGGTATGTCTCTTCTCTTAGCTTTTGCACGGTTATAATTGTTCACTTTATTCTTTCCCGTCAACTAGAGCACAAATCGAGCTCTAGTTACCAAGAGGTTACCGGTTTGAATTCTCCCGACCTCAAATGTTGTTCATTTCATTATTCCTCATCTGTTGAGTTATGGGGTCAGTTCTACGTTTGTTTGTATGCATTTGGTAAGCTTTATGCTTATTATATTTGTTCAGTTCTAGATTATATTTTTGTTGCATCATATCCATATCAAATAAATAATCTGCTTCTTTTATCTATTTGTTTTTATAAGAAACAGAAATGGGATATAAACATAAAATAAAATAGACTAGCTTCTTTACATTGTACCCGAGTACCGGCAGGCGACAGCTTCAGTTGATTTTCAATTTCCATATGACTGTCATTATTCAATATGTATTTTATGCCATTTTTATGTATATAGGCCATGTACATCCGAATCAAGCGCCATAAGACTACGTACTTCATCGAGTTTGATCCAATCGAGACAACTTTAAATATCAAGGAAAAACTAGAGTCCCTTGTTGATCAACCAGTAGTAGATCAGCGCTTGATCCTGGTAGAGAGTGGGGAAGTATTGGAGGATTCCAAGACACTGGCTGACCAAAAGGTACGCTTTAAATTCATATATTTATTACATTTGTGATTGGAAATATTAAAATGAAGGCAACCATCATGAGTTGGGCTTCTAAAAGGATATGAGCTCAATCCATAGTGGTTATCTAATTTCCTTCGAGTTTTTTTTTACATCTAAATGTTGTAGGGTTAGATGGTTTGTCTCGTAAAAATAGTCGGGATATGTGTAAATTGGTATGGACACTCATTGTTATATATATTAAAAAATGAAGGCAATACAACAGCTATAGCTCTGATGAATATTTGCTATATAATTCCAGGTTGAAAACGATGCAGTTGTTGCTTTAACGTTGCGGAAAGGTTTTTTCCTGCCCACTCCCTCAAATTTTTGTGAACTTCTGGCACTTGTTTTAAAAGCCTATGGTCTGATCAGATCAAAGGAACTGAAAATTTCATGTTATGATATTTATAACTTAAAATTTTAGATCCCGTTTGATAACTATTTGATTTTAGAAATTTAAGCCTTTTCTTACTAACCTTCCACCATTCCTACAATATATCCATCTTTCCCCATTCCTACAATATATCCATCTTTCCCTAAGAAAGTAGGTGAATACTAACCAACTTTTAAAAACAAAAACAAACTTGGAAGCTATTTTTTTATGTTTCCAAATTTTAGTTTGATTTCTACAAATATAGGTGAGAGGTAGATATCCAAATAAGAAAAAACATATGGTAAAATGGTTGTTGTAGGCTTAAATTTCAAAAAAAAAAAAAAAACAAAAAACCAAATAGTTATGAAATGGGGCCTTAGTTTCTTAGTTTCTGAACTTTCAAAGTCAAAATAGTTTTTGGACTTTAATAAAGTGTCGAATATACTTTGAATTTTCTATTTTGGCTTTATTAAGTCATGAATTTTTAGTTTTGTGTTTTAACAGATCTTTGACATGTTAATGTCTTTTTTGAAAAAAAATCAATTTACTTACTACATTCAATGGGTACTAGGAACCTGAACTTATAGATCAAACAACCATTAGACACAAACTTGAAAATTTAGATACGTTGAAAACAAAACTGAAAGTTTTAAGGACATTGTCAGTTTTTTAAAATTCACAGACTAAATAGATGCAAACATGAAAGTTTAACTTATGATCTTCACTGCTGTTGGAGTTAGATTCAAAATATGAAAAGTTGCTCCTCACAGGTTTTCTTGATCTTTTCCCTTTATTTGTATAGATGATAACGAGTTCGAGGAGGTCGACATTGTCAGTCCAAACGATTTCTACCAATCTCGTGATGCCGATTCTGGCAATTGGTAAGGACTGAAAAAAAATGTGCTTCTACTGTGGGGTAGTATATGATGTTTACTATCAATCATGTGGGTTGTATTGTTGAAATAACTTTTTTATCTGTTGCATGACATTGAAAATGATAGATAAGAAAGTTTATTCTATGCAGGATTAGATATTGATAAATCCATGCATTCTCTTTGTTACCCAGTTACAATCGAGCAACCTTAACTATCCGATCCAAACTATGAGGGTTGGATTATAATTTTCTTTGAGTTTTGCTGGGTTAAAATTTGTGAGAATTGAAATTTTTGTTCGATTCTTGAGTTGATCATTTGGCTCGGGTTGACCAATTCTCTTAGCATGGTGGCTGGGGACATGCACTATCAATAGTTCATGCTTCAGTTCAAACTTGGTGTCAAACAATTTTTCTTTATCTCTAATAAATTTAAG

mRNA sequence

GCCAACTCAGAATTTCCAATTGTTTAATTAAAAAAGAAAAGAAAAAAAAAAGGAGAAATATGATTCTTAACCGAGGTGGGATTAGTCCAACCGAGTCTCCAAACGCTATGCGTACATTCCTTGTCATTTCATCGCGATGAACTGAACGAACTTTCCCAAGCAAGAGAAATCTCGCCGATTTCAGACGGCAGCAGTGGAGGCAGGATATATCGAAGTGTTGATCCATTAGTTCTTTTTTCAAGATGGCCATGTACATCCGAATCAAGCGCCATAAGACTACGTACTTCATCGAGTTTGATCCAATCGAGACAACTTTAAATATCAAGGAAAAACTAGAGTCCCTTGTTGATCAACCAGTAGTAGATCAGCGCTTGATCCTGGTAGAGAGTGGGGAAGTATTGGAGGATTCCAAGACACTGGCTGACCAAAAGGTTGAAAACGATGCAGTTGTTGCTTTAACGTTGCGGAAAGATGATAACGAGTTCGAGGAGGTCGACATTGTCAGTCCAAACGATTTCTACCAATCTCGTGATGCCGATTCTGGCAATTGGTAAGGACTGAAAAAAAATGTGCTTCTACTGTGGGGTAGTATATGATGTTTACTATCAATCATGTGGGTTGTATTGTTGAAATAACTTTTTTATCTGTTGCATGACATTGAAAATGATAGATAAGAAAGTTTATTCTATGCAGGATTAGATATTGATAAATCCATGCATTCTCTTTGTTACCCAGTTACAATCGAGCAACCTTAACTATCCGATCCAAACTATGAGGGTTGGATTATAATTTTCTTTGAGTTTTGCTGGGTTAAAATTTGTGAGAATTGAAATTTTTGTTCGATTCTTGAGTTGATCATTTGGCTCGGGTTGACCAATTCTCTTAGCATGGTGGCTGGGGACATGCACTATCAATAGTTCATGCTTCAGTTCAAACTTGGTGTCAAACAATTTTTCTTTATCTCTAATAAATTTAAG

Coding sequence (CDS)

ATGGCCATGTACATCCGAATCAAGCGCCATAAGACTACGTACTTCATCGAGTTTGATCCAATCGAGACAACTTTAAATATCAAGGAAAAACTAGAGTCCCTTGTTGATCAACCAGTAGTAGATCAGCGCTTGATCCTGGTAGAGAGTGGGGAAGTATTGGAGGATTCCAAGACACTGGCTGACCAAAAGGTTGAAAACGATGCAGTTGTTGCTTTAACGTTGCGGAAAGATGATAACGAGTTCGAGGAGGTCGACATTGTCAGTCCAAACGATTTCTACCAATCTCGTGATGCCGATTCTGGCAATTGGTAA

Protein sequence

MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGNW

Homology

[Close]

BLAST of Sed0012601 vs. NCBI nr
Match: XP_038889494.1 (uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida])

HSP 1 Score: 186.8 bits (473), Expect = 9.3e-44
Identity = 93/103 (90.29%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQPVVDQRLILV SGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGNW 104
           DQKVENDAVVALTLRKDDN+FEE+DI+ PNDFYQSRDAD+GNW
Sbjct: 61  DQKVENDAVVALTLRKDDNDFEEIDIIQPNDFYQSRDADAGNW 103

[Close]

BLAST of Sed0012601 vs. NCBI nr
Match: XP_022937980.1 (uncharacterized protein LOC111444204 [Cucurbita moschata] >XP_022969566.1 uncharacterized protein LOC111468551 [Cucurbita maxima] >XP_023536780.1 uncharacterized protein LOC111798058 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.0 bits (471), Expect = 1.6e-43
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQP+VDQRLILV SGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGNW 104
           DQKVENDAVVALTLRKDDNEFEE+DIVS NDFYQSR+ADSGNW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 103

[Close]

BLAST of Sed0012601 vs. NCBI nr
Match: KAG7020821.1 (hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.1 bits (466), Expect = 6.0e-43
Identity = 93/103 (90.29%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQP+VDQRLILV SGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGNW 104
           DQKVENDAVVALTLRKDDNEFEE++IVS NDFYQSR+ADSGNW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW 103

[Close]

BLAST of Sed0012601 vs. NCBI nr
Match: XP_008452565.1 (PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 1.0e-42
Identity = 92/103 (89.32%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQPVVDQRLIL+ SGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGNW 104
           DQKVENDAVVALTLRK+DN+FEE++IV PNDFYQSRDADSGNW
Sbjct: 61  DQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGNW 103

[Close]

BLAST of Sed0012601 vs. NCBI nr
Match: KAG6586044.1 (hypothetical protein SDJN03_18777, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.8 bits (460), Expect = 3.0e-42
Identity = 93/102 (91.18%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQP+VDQRLILV SGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGN 103
           DQKVENDAVVALTLRKDDNEFEE+DIVS NDFYQSR+ADSGN
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102

[Close]

BLAST of Sed0012601 vs. ExPASy TrEMBL
Match: A0A6J1HY58 (uncharacterized protein LOC111468551 OS=Cucurbita maxima OX=3661 GN=LOC111468551 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.7e-44
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQP+VDQRLILV SGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGNW 104
           DQKVENDAVVALTLRKDDNEFEE+DIVS NDFYQSR+ADSGNW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 103

[Close]

BLAST of Sed0012601 vs. ExPASy TrEMBL
Match: A0A6J1FIC7 (uncharacterized protein LOC111444204 OS=Cucurbita moschata OX=3662 GN=LOC111444204 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.7e-44
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQP+VDQRLILV SGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGNW 104
           DQKVENDAVVALTLRKDDNEFEE+DIVS NDFYQSR+ADSGNW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 103

[Close]

BLAST of Sed0012601 vs. ExPASy TrEMBL
Match: A0A1S3BTJ1 (uncharacterized protein LOC103493547 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493547 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.0e-43
Identity = 92/103 (89.32%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQPVVDQRLIL+ SGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGNW 104
           DQKVENDAVVALTLRK+DN+FEE++IV PNDFYQSRDADSGNW
Sbjct: 61  DQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGNW 103

[Close]

BLAST of Sed0012601 vs. ExPASy TrEMBL
Match: A0A5A7UM04 (Ubiquitin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00260 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.5e-42
Identity = 90/101 (89.11%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 3   MYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLADQ 62
           MYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQPVVDQRLIL+ SGEVLEDSKTLADQ
Sbjct: 1   MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQ 60

Query: 63  KVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGNW 104
           KVENDAVVALTLRK+DN+FEE++IV PNDFYQSRDADSGNW
Sbjct: 61  KVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGNW 101

[Close]

BLAST of Sed0012601 vs. ExPASy TrEMBL
Match: A0A1S4DYF9 (uncharacterized protein LOC103493547 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493547 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.6e-41
Identity = 92/103 (89.32%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFI+ DPIETTLNIK+KLESL+DQPVVDQRLIL+ SGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEVDIVSPNDFYQSRDADSGNW 104
           DQKVENDAVVALTLRK DN+FEE++IV PNDFYQSRDADSGNW
Sbjct: 61  DQKVENDAVVALTLRK-DNDFEEINIVHPNDFYQSRDADSGNW 102

[Close]

BLAST of Sed0012601 vs. TAIR 10
Match: AT5G57860.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 9.7e-31
Identity = 65/92 (70.65%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
          MAMYIR+KR KTTYFI+ DP ET L++K+KL +L++QPV +QRL+L+ + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVENDAVVALTLRKDDNEFEEVDIVSPNDF 93
          DQKVENDAVVALTL+KDDNEFE+V+I  P DF
Sbjct: 61 DQKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of Sed0012601 vs. TAIR 10
Match: AT5G57860.3 (Ubiquitin-like superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 9.7e-31
Identity = 65/92 (70.65%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
          MAMYIR+KR KTTYFI+ DP ET L++K+KL +L++QPV +QRL+L+ + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVENDAVVALTLRKDDNEFEEVDIVSPNDF 93
          DQKVENDAVVALTL+KDDNEFE+V+I  P DF
Sbjct: 61 DQKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of Sed0012601 vs. TAIR 10
Match: AT5G57860.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 9.7e-31
Identity = 65/92 (70.65%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
          MAMYIR+KR KTTYFI+ DP ET L++K+KL +L++QPV +QRL+L+ + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVENDAVVALTLRKDDNEFEEVDIVSPNDF 93
          DQKVENDAVVALTL+KDDNEFE+V+I  P DF
Sbjct: 61 DQKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of Sed0012601 vs. TAIR 10
Match: AT5G57860.4 (Ubiquitin-like superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 9.4e-18
Identity = 43/66 (65.15%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
          MAMYIR+KR KTTYFI+ DP ET L++K+KL +L++QPV +QRL+L+ + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVEN 67
          DQKV +
Sbjct: 61 DQKVSH 66

[Close]

BLAST of Sed0012601 vs. TAIR 10
Match: AT5G37640.1 (ubiquitin 9 )

HSP 1 Score: 40.8 bits (94), Expect = 7.7e-04
Identity = 26/75 (34.67%), Postives = 43/75 (57.33%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIEFDPIETTLNIKEKLESLVDQPVVDQRLILVESGEVLEDSKTLA 60
           M +++R    K T  +E +  +TT N+K K++     P   QRLI   +G+ LED +TLA
Sbjct: 155 MQIFVRTLTRK-TIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIF--AGKQLEDGRTLA 214

Query: 61  DQKVENDAVVALTLR 76
           D  ++ ++ + L LR
Sbjct: 215 DYNIQKESTLHLVLR 226

The following BLAST results are available for this feature:

BLAST of Sed0012601 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889494.1	9.3e-44	90.29	uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]	[more]
XP_022937980.1	1.6e-43	91.26	uncharacterized protein LOC111444204 [Cucurbita moschata] >XP_022969566.1 unchar...	[more]
KAG7020821.1	6.0e-43	90.29	hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008452565.1	1.0e-42	89.32	PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]	[more]
KAG6586044.1	3.0e-42	91.18	hypothetical protein SDJN03_18777, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0012601 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0012601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HY58	7.7e-44	91.26	uncharacterized protein LOC111468551 OS=Cucurbita maxima OX=3661 GN=LOC111468551...	[more]
A0A6J1FIC7	7.7e-44	91.26	uncharacterized protein LOC111444204 OS=Cucurbita moschata OX=3662 GN=LOC1114442...	[more]
A0A1S3BTJ1	5.0e-43	89.32	uncharacterized protein LOC103493547 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UM04	5.5e-42	89.11	Ubiquitin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00260 PE=4...	[more]
A0A1S4DYF9	1.6e-41	89.32	uncharacterized protein LOC103493547 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Sed0012601 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57860.1	9.7e-31	70.65	Ubiquitin-like superfamily protein	[more]
AT5G57860.3	9.7e-31	70.65	Ubiquitin-like superfamily protein	[more]
AT5G57860.2	9.7e-31	70.65	Ubiquitin-like superfamily protein	[more]
AT5G57860.4	9.4e-18	65.15	Ubiquitin-like superfamily protein	[more]
AT5G37640.1	7.7e-04	34.67	ubiquitin 9	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 3..75 e-value: 4.5E-9 score: 46.1
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 5..76 e-value: 1.9E-11 score: 43.6
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 16.298096
None	No IPR available	GENE3D	3.10.20.90		coord: 1..92 e-value: 8.1E-20 score: 72.8
None	No IPR available	PANTHER	PTHR47725	OS03G0364000 PROTEIN	coord: 1..99
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012601.1	Sed0012601.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding