Sed0012581 (gene) Chayote v1

Overview


Name	Sed0012581
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Phytocyanin domain-containing protein
Location	LG04: 45154809 .. 45156321 (-)
RNA-Seq Expression	Sed0012581
Synteny	Sed0012581

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAATATCAAGAGATAAGAGAAATAGTGTTTTTTTGGGAAGAAAAAGAAAAGATGGAAATGGAAATTGGAAGAATTAGATTAAGGATGGTAATAGTAATAGTGGCAATGGTTTGTGCATTTGCAAGAGTTGCAAAAGGAGAGCAACTTCACAAGGTTGGCAATTCACAAGGATGGAGCCCTAATCTAAACTACACCCTTTGGTCCACCTCTCACCATTTCTATCTTCATGATTGGCTTTGTAAGTTTCTATCCTTTTTTTCCCTTTATTTATTTTTAAATACATGCATGCTACAAAGAATTATTGGAATCGTCAGTGGTATTTACTCCAACTTAATTATTATTGTTGGCAAAAGTTGTTATCTTCGAAGGTAAGGTATGACGTTTAGGCAAGACGGTACGTCGTTGCCATCGACTTTGTCTATAACTTTCGATGAATTGAGTCATCGATGTAGTTTCGTCAATGTGGTGTAGCCGACAATGGAATTTTCAGTGGAGATTCTTCCCCCAAGGATTTTATGGCATTTGTCGATTGTTTGTTGTCAATTTCCTTCTTTTCCTTGTAGTGATTGACGGTATTATTACATACACTTTATTCATTATGTAGCCATTTAAACTTGGAACTTTAATTTATCGTACATTTAGTACCCATTTGTCATAATAAGCTAAGACTCTCAATTTGAGTACGTAACAATTTAGTATTTATACTTTGAAAGTTGCATTATTTAATTTTATACTATAAAAAATCTACCAAAAATCAATGTTATCAAAAGGCCTATACTTTCTCTCTCTTATTTCCTTCTATAAGATATGTTTTTAGGAGTTTTTTTTAGCGGTAATAATAATTAAATGGAGTGGGAATTTGAATCCATGGCCATTTTTTATCATGTACAAACTTAGGTCAATTGAACTGTATGTTATTTTTGTTGGCTCTCTTTAAGAGGTTTATTTCTCTTTCCAACTAATATTCCGTGTTGAAAGATTTCGTGTTCGACAAACGATACTACAACGTGTTAGAAGTGAACCAAACAAGCTACGAGAATTGCAACGACAAGGATTTCATAAAGAACATTACAAGAGGTGGACGAGACGTGTTTCAGCTTGTAGAGTCGAGACGCTATTTCTTCATCGGCGGTGGCGGGTACTGCTTTCAAGGGATGAAACTCACTGTTTTAGTGTCGGGGATCAACGTAGCAAGCTCGACTGCTCCCGCGCCTGCCCCTAACAATAGTGGCGCCTCTTTACCAAACCTCAGTCGTTGGATTTTTATTTCCCTCGTGCTTGTTGTTCTTTGCTTTGGAATATCGTAGAAAAAACAAGTTTTTATTGATTTTAATTTGTTTGGCTTGCGTGGTTTTAGCCTTTAGGCTTTGGTTTGAGATATTTTGAACAAAAATTTAGAAAAAAAAAAATATATGTAGTAGTTGGATATACTTGTATTTTGAACTATTTTCGTGTATTGCCTTGTTCTTGTTAATTGCAACTATGAATTATTTAGAGTTAAATGAAAAA

mRNA sequence

CAAAAAATATCAAGAGATAAGAGAAATAGTGTTTTTTTGGGAAGAAAAAGAAAAGATGGAAATGGAAATTGGAAGAATTAGATTAAGGATGGTAATAGTAATAGTGGCAATGGTTTGTGCATTTGCAAGAGTTGCAAAAGGAGAGCAACTTCACAAGGTTGGCAATTCACAAGGATGGAGCCCTAATCTAAACTACACCCTTTGGTCCACCTCTCACCATTTCTATCTTCATGATTGGCTTTATTTCGTGTTCGACAAACGATACTACAACGTGTTAGAAGTGAACCAAACAAGCTACGAGAATTGCAACGACAAGGATTTCATAAAGAACATTACAAGAGGTGGACGAGACGTGTTTCAGCTTGTAGAGTCGAGACGCTATTTCTTCATCGGCGGTGGCGGGTACTGCTTTCAAGGGATGAAACTCACTGTTTTAGTGTCGGGGATCAACGTAGCAAGCTCGACTGCTCCCGCGCCTGCCCCTAACAATAGTGGCGCCTCTTTACCAAACCTCAGTCGTTGGATTTTTATTTCCCTCGTGCTTGTTGTTCTTTGCTTTGGAATATCGTAGAAAAAACAAGTTTTTATTGATTTTAATTTGTTTGGCTTGCGTGGTTTTAGCCTTTAGGCTTTGGTTTGAGATATTTTGAACAAAAATTTAGAAAAAAAAAAATATATGTAGTAGTTGGATATACTTGTATTTTGAACTATTTTCGTGTATTGCCTTGTTCTTGTTAATTGCAACTATGAATTATTTAGAGTTAAATGAAAAA

Coding sequence (CDS)

ATGGAAATGGAAATTGGAAGAATTAGATTAAGGATGGTAATAGTAATAGTGGCAATGGTTTGTGCATTTGCAAGAGTTGCAAAAGGAGAGCAACTTCACAAGGTTGGCAATTCACAAGGATGGAGCCCTAATCTAAACTACACCCTTTGGTCCACCTCTCACCATTTCTATCTTCATGATTGGCTTTATTTCGTGTTCGACAAACGATACTACAACGTGTTAGAAGTGAACCAAACAAGCTACGAGAATTGCAACGACAAGGATTTCATAAAGAACATTACAAGAGGTGGACGAGACGTGTTTCAGCTTGTAGAGTCGAGACGCTATTTCTTCATCGGCGGTGGCGGGTACTGCTTTCAAGGGATGAAACTCACTGTTTTAGTGTCGGGGATCAACGTAGCAAGCTCGACTGCTCCCGCGCCTGCCCCTAACAATAGTGGCGCCTCTTTACCAAACCTCAGTCGTTGGATTTTTATTTCCCTCGTGCTTGTTGTTCTTTGCTTTGGAATATCGTAG

Protein sequence

MEMEIGRIRLRMVIVIVAMVCAFARVAKGEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVFDKRYYNVLEVNQTSYENCNDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVLVSGINVASSTAPAPAPNNSGASLPNLSRWIFISLVLVVLCFGIS

Homology

[Close]

BLAST of Sed0012581 vs. NCBI nr
Match: XP_022926318.1 (lamin-like protein [Cucurbita moschata] >KAG6588504.1 Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022335.1 Lamin-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-52
Identity = 111/161 (68.94%), Postives = 131/161 (81.37%), Query Frame = 0


Query: 8   IRLRMVIVIVAMVCAFARVAKGEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVFD 67
           +R+R+++VIVAM  A+A +A GE+LHKVGNS+GW+PNLNYTLWS+SH FYL DWLYFVFD
Sbjct: 4   MRVRVIMVIVAM--AWATLAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFD 63

Query: 68  KRYYNVLEVNQTSYENCNDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVL 127
           KRYYNVLEVN+TSYE+CN+K+FIKNITRGGRDVFQL E R YFFI GGGYCFQGMKL VL
Sbjct: 64  KRYYNVLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVL 123

Query: 128 VSGINVASSTAPAPAPNNSGASLPNLSRWIFISLVLVVLCF 169
           V    VA +  P+  P  SGASL N + WI  +L+L V  F
Sbjct: 124 VCPTAVAPAAPPSATP-ISGASLSNPTCWIMNALMLFVALF 161

[Close]

BLAST of Sed0012581 vs. NCBI nr
Match: XP_023530289.1 (lamin-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 215.3 bits (547), Expect = 4.1e-52
Identity = 110/161 (68.32%), Postives = 131/161 (81.37%), Query Frame = 0


Query: 8   IRLRMVIVIVAMVCAFARVAKGEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVFD 67
           +R+R+++VIVA+  A+ARVA GE+LHKVGNS+GW+PNLNYTLWS+SH FYL DWLYFVFD
Sbjct: 4   MRVRVIMVIVAI--AWARVAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFD 63

Query: 68  KRYYNVLEVNQTSYENCNDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVL 127
           KRYYNVLEVN+TSYE+CN+K+FI NITRGGRDVFQL E R YFFI GGGYCF+GMKL VL
Sbjct: 64  KRYYNVLEVNKTSYESCNEKEFINNITRGGRDVFQLTELRPYFFIAGGGYCFEGMKLAVL 123

Query: 128 VSGINVASSTAPAPAPNNSGASLPNLSRWIFISLVLVVLCF 169
           V    VA +  P+  P  SGASL N + WI  +L+L V  F
Sbjct: 124 VCPTAVAPAAPPSATP-ISGASLSNPTCWIMNALLLFVALF 161

[Close]

BLAST of Sed0012581 vs. NCBI nr
Match: XP_022970103.1 (lamin-like protein [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 2.2e-50
Identity = 109/161 (67.70%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 8   IRLRMVIVIVAMVCAFARVAKGEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVFD 67
           +R+R+++VIVAM  A+A  A GE+LHKVGNS+GW+PNLNYTLWS+SH FYL DWLYFVFD
Sbjct: 4   MRVRVIMVIVAM--AWATDAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFD 63

Query: 68  KRYYNVLEVNQTSYENCNDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVL 127
           KRYYNVLEVN+TSYE C +K+FIKNITRGGRDVFQL E R YFFI GGGYCFQGMKL VL
Sbjct: 64  KRYYNVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVL 123

Query: 128 VSGINVASSTAPAPAPNNSGASLPNLSRWIFISLVLVVLCF 169
           V    VA +  P+  P  S ASL N + WI  +L+L V  F
Sbjct: 124 VCPTAVAPAAPPSATP-ISRASLSNPTCWIMNALLLFVALF 161

[Close]

BLAST of Sed0012581 vs. NCBI nr
Match: XP_008443357.1 (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 6.1e-48
Identity = 105/152 (69.08%), Postives = 117/152 (76.97%), Query Frame = 0


Query: 6   GRIRL--RMVIVIVAMVCAFARVA-KGEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWL 65
           GRIR   +MV+V   ++    R+  KGE LHKVGNS+GWSPN NYT WSTSHHFYL DWL
Sbjct: 10  GRIRFIRKMVMVCGWLLLLVVRIGIKGEVLHKVGNSEGWSPNQNYTHWSTSHHFYLGDWL 69

Query: 66  YFVFDKRYYNVLEVNQTSYENCNDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGM 125
           YFVFDKRYYNVLEVN+ SYE+CNDKDFIKNITRGGRDVFQL E   YFFIGGGGYCFQGM
Sbjct: 70  YFVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGM 129

Query: 126 KLTVLVSGINVASSTAPAPAPNNSGASLPNLS 155
           KL V VS ++ A + +PA A N SG     LS
Sbjct: 130 KLAVYVSAVDSAPAPSPA-ASNKSGGGASFLS 160

[Close]

BLAST of Sed0012581 vs. NCBI nr
Match: KAA0053800.1 (lamin-like protein [Cucumis melo var. makuwa] >TYK25601.1 lamin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 198.4 bits (503), Expect = 5.1e-47
Identity = 101/144 (70.14%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 12  MVIVIVAMVCAFARVA-KGEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVFDKRY 71
           MV+V   ++    R+  KGE LHKVGNS+GWSPN NYT WSTSHHFYL DWLYFVFDKRY
Sbjct: 1   MVMVCGWLLLLVVRIGIKGEVLHKVGNSEGWSPNQNYTHWSTSHHFYLGDWLYFVFDKRY 60

Query: 72  YNVLEVNQTSYENCNDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVLVSG 131
           YNVLEVN+ SYE+CNDKDFIKNITRGGRDVFQL E   YFFIGGGGYCFQGMKL V VS 
Sbjct: 61  YNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMKLAVYVSA 120

Query: 132 INVASSTAPAPAPNNSGASLPNLS 155
           ++ A + +PA A N SG     LS
Sbjct: 121 VDSAPAPSPA-ASNKSGGGASFLS 143

[Close]

BLAST of Sed0012581 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.7e-24
Identity = 58/134 (43.28%), Postives = 84/134 (62.69%), Query Frame = 0


Query: 11  RMVIVIVAMVCAFARVAK----GEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVF 70
           R  ++I A+V AF   A       + + VG ++ W+PN+NYT+W+   HFYL DWLYFVF
Sbjct: 3   RFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVF 62

Query: 71  DKRYYNVLEVNQTSYENCNDKDFIKNITRG-GRDVFQLVESRRYFFIGGGGYCFQGMKLT 130
           D+  +N+LEVN+T YE C     I+N TRG GRD+  L +++ Y+ + G G C+ GMKL+
Sbjct: 63  DRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLS 122

Query: 131 VLVSGINVASSTAP 140
           V V  +     +AP
Sbjct: 123 VKVEKLPPPPKSAP 136

[Close]

BLAST of Sed0012581 vs. ExPASy Swiss-Prot
Match: Q9T076 (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.1e-11
Identity = 44/119 (36.97%), Postives = 60/119 (50.42%), Query Frame = 0


Query: 35  VGNSQGW--SPNLNYTLWSTSHHFYLHDWLYFVFDKRYYNVLEVNQTSYENCNDKDFIKN 94
           VG S  W  +P  NY  WS  + F +HD LYF + K   +VLEVN+  Y+ CN K+ IK 
Sbjct: 33  VGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKR 92

Query: 95  ITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVLVSGINVASSTAPAPAPNNSGASLP 152
           +  G  ++        YF  G    C +G KL V+V    +  STA +P     G+S P
Sbjct: 93  VDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISARI-PSTAQSPHAAAPGSSTP 150

[Close]

BLAST of Sed0012581 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 9.9e-09
Identity = 31/99 (31.31%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 32  LHKVGNSQGWSPNL--NYTLWSTSHHFYLHDWLYFVFDKRYYNVLEVNQTSYENCNDKDF 91
           +HKVG+S GW+  +  +Y  W++S+ F++ D L F ++ +++NVL+V+Q  +++CN    
Sbjct: 3   VHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSP 62

Query: 92  IKNITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVLV 129
             + T G   +        YF  G  G+C  G K+ + V
Sbjct: 63  AASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101

[Close]

BLAST of Sed0012581 vs. ExPASy Swiss-Prot
Match: Q02917 (Early nodulin-55-2 OS=Glycine max OX=3847 GN=ENOD55-2 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 9.9e-09
Identity = 49/176 (27.84%), Postives = 80/176 (45.45%), Query Frame = 0


Query: 14  IVIVAMVCAFARVAKGEQLHKVGNSQGWSPNL----NYTLWSTSHHFYLHDWLYFVFDKR 73
           +V++AM C     ++ E+    G+ + W   L    + + W+ SH F + D L F ++KR
Sbjct: 12  LVMLAM-CLLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKR 71

Query: 74  YYNVLEVNQTSYENCNDKDFIKNITRGGRDVFQLVE-SRRYFFIGGGGYCFQGMKLTVLV 133
             +V E N+T YE CN       +  GG     L +   R+F  G   +C  G+KL VLV
Sbjct: 72  TESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLV 131

Query: 134 SGINVAS------------------STAPAPAPNNSGASLPNLSRWIFISLVLVVL 167
              N                     S +P+P PNN G +  + + +I + + L++L
Sbjct: 132 ISSNKTKKNLLSPSPSPSPPPSSLLSPSPSPLPNNQGVTSSSGAGFIGVMMWLMLL 186

[Close]

BLAST of Sed0012581 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-08
Identity = 38/118 (32.20%), Postives = 56/118 (47.46%), Query Frame = 0


Query: 34  KVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVFDKRYYNVLEVNQTSYENCNDKDFIKNI 93
           KVG+  GW+ NL+YT+W T   F + D L FV+    ++V  V++  Y+NC+     +N 
Sbjct: 25  KVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLS-HSVSVVDKAGYDNCDSSGATQNF 84

Query: 94  TRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVLVSGINVASSTAPAPAPNNSGASLP 152
             G   +        +F     G+C  GMKL V V     + ST  +P    S  S P
Sbjct: 85  ADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAPSPSTPSSPPSTPSTPSSP 141

[Close]

BLAST of Sed0012581 vs. ExPASy TrEMBL
Match: A0A6J1EHP8 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433505 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 8.8e-53
Identity = 111/161 (68.94%), Postives = 131/161 (81.37%), Query Frame = 0


Query: 8   IRLRMVIVIVAMVCAFARVAKGEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVFD 67
           +R+R+++VIVAM  A+A +A GE+LHKVGNS+GW+PNLNYTLWS+SH FYL DWLYFVFD
Sbjct: 4   MRVRVIMVIVAM--AWATLAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFD 63

Query: 68  KRYYNVLEVNQTSYENCNDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVL 127
           KRYYNVLEVN+TSYE+CN+K+FIKNITRGGRDVFQL E R YFFI GGGYCFQGMKL VL
Sbjct: 64  KRYYNVLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVL 123

Query: 128 VSGINVASSTAPAPAPNNSGASLPNLSRWIFISLVLVVLCF 169
           V    VA +  P+  P  SGASL N + WI  +L+L V  F
Sbjct: 124 VCPTAVAPAAPPSATP-ISGASLSNPTCWIMNALMLFVALF 161

[Close]

BLAST of Sed0012581 vs. ExPASy TrEMBL
Match: A0A6J1I2W1 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469092 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.1e-50
Identity = 109/161 (67.70%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 8   IRLRMVIVIVAMVCAFARVAKGEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVFD 67
           +R+R+++VIVAM  A+A  A GE+LHKVGNS+GW+PNLNYTLWS+SH FYL DWLYFVFD
Sbjct: 4   MRVRVIMVIVAM--AWATDAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFD 63

Query: 68  KRYYNVLEVNQTSYENCNDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVL 127
           KRYYNVLEVN+TSYE C +K+FIKNITRGGRDVFQL E R YFFI GGGYCFQGMKL VL
Sbjct: 64  KRYYNVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVL 123

Query: 128 VSGINVASSTAPAPAPNNSGASLPNLSRWIFISLVLVVLCF 169
           V    VA +  P+  P  S ASL N + WI  +L+L V  F
Sbjct: 124 VCPTAVAPAAPPSATP-ISRASLSNPTCWIMNALLLFVALF 161

[Close]

BLAST of Sed0012581 vs. ExPASy TrEMBL
Match: A0A1S3B8J9 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486965 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.9e-48
Identity = 105/152 (69.08%), Postives = 117/152 (76.97%), Query Frame = 0


Query: 6   GRIRL--RMVIVIVAMVCAFARVA-KGEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWL 65
           GRIR   +MV+V   ++    R+  KGE LHKVGNS+GWSPN NYT WSTSHHFYL DWL
Sbjct: 10  GRIRFIRKMVMVCGWLLLLVVRIGIKGEVLHKVGNSEGWSPNQNYTHWSTSHHFYLGDWL 69

Query: 66  YFVFDKRYYNVLEVNQTSYENCNDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGM 125
           YFVFDKRYYNVLEVN+ SYE+CNDKDFIKNITRGGRDVFQL E   YFFIGGGGYCFQGM
Sbjct: 70  YFVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGM 129

Query: 126 KLTVLVSGINVASSTAPAPAPNNSGASLPNLS 155
           KL V VS ++ A + +PA A N SG     LS
Sbjct: 130 KLAVYVSAVDSAPAPSPA-ASNKSGGGASFLS 160

[Close]

BLAST of Sed0012581 vs. ExPASy TrEMBL
Match: A0A5A7UEY9 (Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007600 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.5e-47
Identity = 101/144 (70.14%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 12  MVIVIVAMVCAFARVA-KGEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVFDKRY 71
           MV+V   ++    R+  KGE LHKVGNS+GWSPN NYT WSTSHHFYL DWLYFVFDKRY
Sbjct: 1   MVMVCGWLLLLVVRIGIKGEVLHKVGNSEGWSPNQNYTHWSTSHHFYLGDWLYFVFDKRY 60

Query: 72  YNVLEVNQTSYENCNDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVLVSG 131
           YNVLEVN+ SYE+CNDKDFIKNITRGGRDVFQL E   YFFIGGGGYCFQGMKL V VS 
Sbjct: 61  YNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMKLAVYVSA 120

Query: 132 INVASSTAPAPAPNNSGASLPNLS 155
           ++ A + +PA A N SG     LS
Sbjct: 121 VDSAPAPSPA-ASNKSGGGASFLS 143

[Close]

BLAST of Sed0012581 vs. ExPASy TrEMBL
Match: A0A0A0LF66 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824210 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 5.5e-47
Identity = 104/169 (61.54%), Postives = 124/169 (73.37%), Query Frame = 0


Query: 8   IRLRMVIVIVA-MVCAFARVAKGEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVF 67
           IR +MV+V    ++     + KGE+LHKVGNSQGW+PN NYT WS+SHHFYL DWLYFVF
Sbjct: 50  IRKKMVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVF 109

Query: 68  DKRYYNVLEVNQTSYENCNDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTV 127
           DKRYYNVLEVN+ S+E+CN+KDFIKNITRGGRDVFQL E   YFFIGGGGYCFQGMKL V
Sbjct: 110 DKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAV 169

Query: 128 LVSGINVASSTAPAPAP---NNSGASL----PNLSRWIFISLVLVVLCF 169
            +S ++    +APAP+P   N SG +     P L   I  +L+L V  F
Sbjct: 170 YMSTVD---HSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIF 215

[Close]

BLAST of Sed0012581 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26
Identity = 61/145 (42.07%), Postives = 89/145 (61.38%), Query Frame = 0


Query: 14  IVIVAMVCAFARVAKGEQLHKVGNSQ-GWSPNLNYTLWSTSHHFYLHDWLYFVFDKRYYN 73
           +V V ++     V     LH+VG  +  W+ ++N++ W+    FY  DWLYF F++  +N
Sbjct: 9   LVYVTVMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHN 68

Query: 74  VLEVNQTSYENCNDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVLV---- 133
           +L+VN++SYE C D D+I NITRGGRDVFQL+E + Y+FI G GYC +GMKL + V    
Sbjct: 69  ILQVNKSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAITVLPQP 128

Query: 134 ---SGINVASSTAPAPAPNNSGASL 151
              +  N  S+T P   PN   A++
Sbjct: 129 PPSAPTNFTSTTTPLIPPNAITAAI 153

[Close]

BLAST of Sed0012581 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 115.5 bits (288), Expect = 4.1e-26
Identity = 63/138 (45.65%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 11  RMVIVIVAMVCAFARVAKGEQL----HKVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVF 70
           R +++I A+V AF   A   ++    + VG+ + W+PN+NYTLW+   HFY+ DWLYFVF
Sbjct: 3   RSMVLISAVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVF 62

Query: 71  DKRYYNVLEVNQTSYENCNDKDFIKNITRG-GRDVFQLVESRRYFFIGGGGYCFQGMKLT 130
            +  +N+LEVN+  YE C     I+N TRG GRD+  L E+RRY+ + G G C QGMKL 
Sbjct: 63  YRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLD 122

Query: 131 VLVSGINVASSTAPAPAP 144
           VLV        T P P P
Sbjct: 123 VLV-------ETPPPPPP 133

[Close]

BLAST of Sed0012581 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 115.2 bits (287), Expect = 5.3e-26
Identity = 62/142 (43.66%), Postives = 88/142 (61.97%), Query Frame = 0


Query: 11  RMVIVIVAMVCAFARVAKGEQLHK--VGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVFDK 70
           R+ +++   V AF   A      +  VG+++ W+PN+NYT+W+   HFYL DWLYFV+++
Sbjct: 3   RVAVLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVYER 62

Query: 71  RYYNVLEVNQTSYENCNDKDFIKNITRG-GRDVFQLVESRRYFFI-GGGGYCFQGMKLTV 130
             YNV+EVN+T+Y +CN  + I N +RG GRD+  L  +R Y+ I G GG C+ GMKL V
Sbjct: 63  NQYNVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAV 122

Query: 131 LVSGINVASSTAPAPAPNNSGA 149
           LV          PA APN + A
Sbjct: 123 LVE----KPPPPPAAAPNKNSA 140

[Close]

BLAST of Sed0012581 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25
Identity = 58/134 (43.28%), Postives = 84/134 (62.69%), Query Frame = 0


Query: 11  RMVIVIVAMVCAFARVAK----GEQLHKVGNSQGWSPNLNYTLWSTSHHFYLHDWLYFVF 70
           R  ++I A+V AF   A       + + VG ++ W+PN+NYT+W+   HFYL DWLYFVF
Sbjct: 3   RFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVF 62

Query: 71  DKRYYNVLEVNQTSYENCNDKDFIKNITRG-GRDVFQLVESRRYFFIGGGGYCFQGMKLT 130
           D+  +N+LEVN+T YE C     I+N TRG GRD+  L +++ Y+ + G G C+ GMKL+
Sbjct: 63  DRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLS 122

Query: 131 VLVSGINVASSTAP 140
           V V  +     +AP
Sbjct: 123 VKVEKLPPPPKSAP 136

[Close]

BLAST of Sed0012581 vs. TAIR 10
Match: AT2G26720.1 (Cupredoxin superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 3.4e-12
Identity = 38/125 (30.40%), Postives = 62/125 (49.60%), Query Frame = 0


Query: 26  VAKGEQLHKVGNSQGWSP-NLNYTLWSTSHHFYLHDWLYFVFDKRYYNVLEVNQTSYENC 85
           VA G  +HKVGN++GW+    +Y  W++S  F + D L F ++K Y++V EV    +E C
Sbjct: 22  VAVGGTVHKVGNTKGWTMIGGDYEAWASSRVFQVGDTLVFAYNKDYHDVTEVTHNDFEMC 81

Query: 86  NDKDFIKNITRGGRDVFQLVESRRYFFIGGGGYCFQGMKLTVLVSGINVASSTAPAPAPN 145
                ++    G   +       ++F  G  G+C +G KL + V   ++     P P P 
Sbjct: 82  ESSKPLRRYKTGSDSISLTKPGLQHFICGVPGHCKKGQKLQIHVLPASLGHVAVPVPGPV 141

Query: 146 NSGAS 150
            S +S
Sbjct: 142 RSQSS 146

The following BLAST results are available for this feature:

BLAST of Sed0012581 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926318.1	1.8e-52	68.94	lamin-like protein [Cucurbita moschata] >KAG6588504.1 Lamin-like protein, partia...	[more]
XP_023530289.1	4.1e-52	68.32	lamin-like protein [Cucurbita pepo subsp. pepo]	[more]
XP_022970103.1	2.2e-50	67.70	lamin-like protein [Cucurbita maxima]	[more]
XP_008443357.1	6.1e-48	69.08	PREDICTED: lamin-like protein [Cucumis melo]	[more]
KAA0053800.1	5.1e-47	70.14	lamin-like protein [Cucumis melo var. makuwa] >TYK25601.1 lamin-like protein [Cu...	[more]

BLAST of Sed0012581 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	1.7e-24	43.28	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]
Q9T076	8.1e-11	36.97	Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 S...	[more]
P80728	9.9e-09	31.31	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]
Q02917	9.9e-09	27.84	Early nodulin-55-2 OS=Glycine max OX=3847 GN=ENOD55-2 PE=2 SV=1	[more]
Q96316	1.3e-08	32.20	Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1	[more]

BLAST of Sed0012581 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHP8	8.8e-53	68.94	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433505 PE=4 SV=1	[more]
A0A6J1I2W1	1.1e-50	67.70	lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469092 PE=4 SV=1	[more]
A0A1S3B8J9	2.9e-48	69.08	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486965 PE=4 SV=1	[more]
A0A5A7UEY9	2.5e-47	70.14	Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A0A0LF66	5.5e-47	61.54	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824210...	[more]

BLAST of Sed0012581 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27035.1	1.1e-26	42.07	early nodulin-like protein 20	[more]
AT4G12880.1	4.1e-26	45.65	early nodulin-like protein 19	[more]
AT3G01070.1	5.3e-26	43.66	early nodulin-like protein 16	[more]
AT5G15350.1	1.2e-25	43.28	early nodulin-like protein 17	[more]
AT2G26720.1	3.4e-12	30.40	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 41..122 e-value: 1.6E-17 score: 63.3
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 31..130 score: 28.080603
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 30..131 e-value: 7.6E-24 score: 86.0
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 32..128
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 11..162
None	No IPR available	PANTHER	PTHR33021:SF385	OS03G0758500 PROTEIN	coord: 11..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012581.1	Sed0012581.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016740	transferase activity