Sed0012577 (gene) Chayote v1

Overview


Name	Sed0012577
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1
Location	LG10: 597671 .. 603268 (+)
RNA-Seq Expression	Sed0012577
Synteny	Sed0012577

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGATATCTACTCCATGTCTCTATCCAGGTGCGTGTTAGCGTTATCCAGGATTCTGTTATGATTTGAAGTTTCATTGTTGAACAAATTAATTGTCAGAACTTTTTGTTTGTAGCTAGTGATGAATGGGATTGGTCTACCTAAGCTCTAATGATATTGAATTGTAGATAGAGGCTGGAAGGGAGTAGTTTCTGCAAATGAATGTGTTGGCGGGACATCTTTATCCAATTTTCCAAAGGTTTGCAGTTTTCTTTTAGTTTTTTTTTTGGTTCAACAACATTTGGGAGTCGGGGTGTCCCCAAGGGGTGGCGTGGGGGTTGAAGGATTGGGCGGCTTTGAAGGTGTGCTCGCCTCAAGGTCATCCCACGTTCGAGACTCACTTGGAACATTAATTTGTAGACACCTCCCATGTCTCCATTCATTCGATGTCTCCCGGTGCCTAGTTTAGGGACGAACGTGGTTAAGTTACCTAATTATAGTGGAGCGAAACTTTGATTCCCCCGTTTCAGGAAAGAAAAAAAAAAGAAAAAGAAAAAGAAAAAAAGGTAGTTGGGATTTCGAAATTGTAACCTTTTAGTTACTAGATCGTACATTATGTCATTTGAACTCTGCTCCCCTTTTCCCAAGGTTTACAGTTTTATCATGTCATGATTGTACAAATTTACCCCTAGTTGTATAATGGTTTTGTGTAGGCTCATCCATTTTTCCATCAGCCTTACCGTGGATTATTTTTCTATTCAATATTCAGACTCCATTTGTAGGGTCATTTCCGTCGCGGATACTGCTAATTGGAAGTGCATTGAACAAATCACTGCATAGAAATCAGTTGGTTCCTTGCATCAAGTGTGAGAACAATGATGAATCCTATGAAGAAGTATCAGTGGAGCGTCCACCATACCATGTTTACATGGACTCGACTTCTGGGCAGCTTGAACCAGCTTCGGGGGCACGTGCAAGTATTCCGGGAGAAGAATACTGGCCAGAAGGAACTGCTAGTCGAGTTAGAGCGGCAAGATCTCCCGAACCAACTGGTGCATCTGTTGGATCTCCATCGGCCAAAATCCAGGAAGTAGGAGAAAGAAAAATAGAACACTAGCAGCTGTTGCACATGATTCATCCGAAGTGACTGAAATAGATTCTAGTGACCTTATGATCACTGACATTTCTGAGGATTTAATAGAAGAGCCTAAAGATGCTACTTCGCAGTATGTTGTTTATCAGACAGAACCTGATGAGGAAGCAACTGGGTTTGATTTAGATAAGAAACTTGGAAATCCCCATCCATTCATTGACCCTGAAAAGAAGAAGCCAATTGAGGAGCCGCGTACTAGTGAAGAACTTTGGTGGAATTGGAGAAAGCCAGAAAAAGAACAATGGTCTAGGTGGCAAAGGAGGAAACCAGATGTTGAAACGGTCAGTTCATGTCTAAAGAAAAACAATGGTGAATGTTGAACAATGACTTTGCATATGTACTTACGGTAACTGCATTGAGTGGATTTTGAAACATAATAGTGTGTTAGACAAAATATATCGAGAAACATAACTATAAATTGCGAATACAGGATTCGAGTTATGGATCATTTCTAATTGCTCATCCCCACCTAAGTCTTGTTTATTATTATATACAGATTTTATGCATGATAACTGATATTTTAATGCTTGCATACAAATAGCAAAGCAGTGAAAATTAGGATTTAGATGAAATTATTTTATCATACATAAAAATATCTTTCGACCTTGAAGGTGCTCTTCTTTGATCTAATTTCTTGGGTTTAATGACTAAACTAGGGCACCATACACAACAAGAACTTGTTTAAAACCAGGAAAAGTGGTTTTAAGTCTTCATATCTGCCTTCTTTTTTATAATATCTGTAGGTTTTTCTCAAAGCAATGGCAGAGACTGGGCAGATAAAGCTTTACGGTGAACAACCAACATTAGCAGAAACTTCTCTGTACAGGGCTCGTCGACATCTTTATAAGGAAGAAAGGTATTCTTTCCTAGCTTGACTGGCATTTATTATACGTATTATTATTTTTCTTATCAAGCATACTTATTTAGTACTTTAGGATATACCGAATGTTAGCAGTTGAAAAATATTTTTAAATCTTAATGTTAACTAGGATGCATGTAGTTTATATATTAGAAAGAATTTTGTAAGATTTTAGTATAGGTAAAATAATGGTGTATATGTTTTAGCAGAATAAAACGTAAAATTGGTTTTTTTTTTTCTTCTAATTAAGACTAGGCCTCCTTTATCATAGGTTGACCCAGTAGTTATTGGGGCCAATGAAAAGAATTAAATAGTTGAGAAGGAATGAGTTTATGGCCATTTAGTATCTGAATCATTTGATATCCTATAGTATGCATCGCAACCAAGTGAAGTAGGATCATGTTGTTGTCTTATGAGATTAGTCTAGGAGCAAATGAATTCGGTGTTGGCATTCAAAAATATATATAATAAAAAAATGGACTAGGCATCTACAAGGGTCAAAGATATTGTTCATATACTATAGCAGCAGAATTTGGAAATCTTTTGGATCTTTAGAACGTTTAGAAATTTTGATGCTTAGTTATTTCTTCTTGATTCTAATTTCACAGCTTACAAAATATTAACCAGATTGCTGGCTTGTAAAAGTATTTTATACACTGCTGTTGATTGAGGTAAATTTGATAACGAATAAATGATATCTTTATTGGCTTCAAGCCGAACAAGACTGGTTGTGCATCGCTGTGGTTTAGGAACTTTTGAATAACAAGCGGATTCTATCTTTTCAGACTTCAAGCTGAACAGGAAAGATTGGAGAGAGTAGGTCCCATAGCATTCTACTCAGAATGGGTCAAAGCTTGGAAGGCAGATACTTCAATGGATGCCATAAAAAAACATTTTGAAGAGACTGGAGAAGATCAAAACACGCAAATGATCGAAATGTTCCAAAACCAAACTGAGAAAGAGTTTCGCATTATGATGGGGACTGATATTCGCATCCGCAGGGATCCGTTGGCAATGCGTATGCGGGAAGATCAGATTAAGCAAAGTATCCATTCCAAAGCTGATAAGTTTTTGTGGTATTTCAGTTTTATTAATTGCTTGTCATGTTGTTCTATCATCACGATGTCCTGCACCATGTTTTTTTTCCAACTAACTGTAAGAAATTGGTTTTCATCCTATTCCTTCCCTTAAAGCATATTTTTTTCTATTTTGGATTTCATAGCGTTTGCCACCAACTTCTCTTGGGTTCATCTCTGAATAGAATTTGTTACAATTACAGTTTCAACTATCAGAACTTTCATTTCTCAATAGAATGATATTCTTCTACCAAGTAAACCGCTTTTCTGTAAAAAAAAAAAAATCCATCCACTGTCCTTTTTTTTTTAATAGTAATCTAATTTAGTTTGTTGTTGACCTCTCAGTATGGGGTGGTGATCCTGTGTACCCTACCGTCAACTACATTCAAGATCCTGATGAAATCATTGATTATAGGGGTCCAGATTTTCATGAACCAACACCTGACATGCTAGATTATCTGAAGGAGGTTGCTTTACTTTGCTTATTATTTTTTCAACCTTCTTTTCTCTCTCCAATTTTGTATGATTTGATGGGGCAATGAAGATCACCAGCGTCGTTGTCAAAGCTTTTTGTAACTTTTATGGACTGATTTTGTAACTTTTCATTATGCACATGCACGAAGTACTGACCGTTTCCTTTTTCCCTTTTTTAATCAGCATGGTAAAATTATATCAAGAGAGGAGCTTGAAGAAATTCTGGGTAAAGAAAAAAACGAGGAGCTTGAGGTATTTTTTACAACAACATTTGATTTATTGGTTGTACCATGAAATTCAAGTTTGATAGAATATTCTATATTCAACCACAGAACTTAGAGGTTATCTTTGGCTGCAATCTGCATATAATGTCCATTTTACCACATTATTAATAACTAACGTACATGAAACTAAAACCATGGAATCGTTTTGATTTTTAATGACATAACAAAAACCTCACATGTACACAAACCCTTGGATCGGTGGTCTAGGGTAACTTATTGTTTTTTAAAGTTATAACATGGAGTTCTTGGAATCATGTGCCTTTAGCTTTAACATTCCTTTAAGTAATGAAGAATACCCTTAAAAATTGATATGTATCACATTTTATTCTCAATGTAAAACAGGTGACTGATATGGATGATGCCATGGCCCAAGCTATTGATATCGGTGAAAATGACGTGAGTTCATGTTTTTCTTTTTTCTATGTTCTTTCATTTGTTTGTTTCACAGTAACCGTGTATCGATTCTTCTTACAACCAGAATTTTTATGAAGATCACATCACACTATAATTGAAAACATAACCAGAGCTAAATTGAGTTCTTAAGTTTAGATTCAAACTTTAACTGCTCAAACCAAACATTTTGTAGTGTAATGTAGTCTTTATACATGATATCAATATTGATGATTCCTCCAATTATAAATGAATCATCTTCATCTTCAATTGCTATTTAGGATGGAGAGGATAGTGAGGTTGAGGTCGATGAAGACGCAGAGGAAAAAATCAATCGCAACTGGAGTGTCTTGAAAAGTAGTCCCCACCTCAACAAGTCAAAGGTGATCAACTCACTTTGTTCTCAATTTCTAATTGTGCTCGCACTCGTAGATCCATATGTTCATGTTGATCGTTATATTTTACATGTTGAGTGCTTTTCTCTTTTCATGCACAACCAAAGTTCGGAAACAATGTGTGTTCACACGAGATTTTTGCGTGGTAATTTATGATTGACCAAAATTTCTCTTTGAACCATGTAAATTGGAAAGTCTTAAATGATGTGTTGGTACAGAAGTTACAAAAGTCATCAATACATACCAAAGTCTTTAACTCTTTCATGTAAAATTGAGCTCATCAGTTTCACTTAATTGAAGTCTATAAATTCACTTGATTGAGCCTATCAATCTAATGTGATTGAACATTTTTTGCTATATTTGAATTTTATCTAAAATTTTGATTATCCGTACACTTCCCCCCATTTTTCCTACTCAAGAAAATTCCCAGAAAACAAAAAAATTGTTTGGAAAACTTAGATATGGTTTTGGTTCCTGCCCATTTTATCAGTTTGAGCTGCAAAAGAAAATGATCATGTTATACAAGGAAAACACTATAAATTTGTATCTCAAATTTGATTTTTCAGTTCAGTTGAAGCTGCAAGGATGCACTCCTTTTTTTTAGAACAAAGGATGCACTCCTAACTACGAGATGATGCTTGGAGTGATTGCTTTTTTCATCTCTTTTTTTTAAATAAATATTTCTTAGTTATCTAAAATTAAAGACGTAGAATGTATGTTTTCAAATATGGTAGGGTTAGACGGTTTGTCCCATGAGAATAGCCGAGGTGTGCATAAGCTCGTTCGGACATTCACGGATATTAAAAAAAGAAAAAAGCTACTTTGTAGCAACTTTATTATGTCTTGTAAGTCAATTACTCAAATGTGTATTTAAAAATGCAGGGGAAGCCTAAAAAGGAGGATCCAACAGCATCACTGGATGGAGCGGTTGATGACTCAGAGAACTTGACTGATTTTCTTATGGACTTCGAAGAAGATGAGTGA

mRNA sequence

ATGGCTTCGATATCTACTCCATGTCTCTATCCAGATAGAGGCTGGAAGGGAGTAGTTTCTGCAAATGAATGTGTTGGCGGGACATCTTTATCCAATTTTCCAAAGACTCCATTTGTAGGGTCATTTCCGTCGCGGATACTGCTAATTGGAAGTGCATTGAACAAATCACTGCATAGAAATCAGTTGGTTCCTTGCATCAAGTGTGAGAACAATGATGAATCCTATGAAGAAGTATCAGTGGAGCGTCCACCATACCATGTTTACATGGACTCGACTTCTGGGCAGCTTGAACCAGCTTCGGGGGCACGTGCAAGTATTCCGGGAGAAGAATACTGGCCAGAAGGAACTGCTAGTCGAGTTAGAGCGGCAAGATCTCCCGAACCAACTGGAAGTAGGAGAAAGAAAAATAGAACACTAGCAGCTGTTGCACATGATTCATCCGAAGTGACTGAAATAGATTCTAGTGACCTTATGATCACTGACATTTCTGAGGATTTAATAGAAGAGCCTAAAGATGCTACTTCGCAGTATGTTGTTTATCAGACAGAACCTGATGAGGAAGCAACTGGGTTTGATTTAGATAAGAAACTTGGAAATCCCCATCCATTCATTGACCCTGAAAAGAAGAAGCCAATTGAGGAGCCGCGTACTAGTGAAGAACTTTGGTGGAATTGGAGAAAGCCAGAAAAAGAACAATGGTCTAGGTGGCAAAGGAGGAAACCAGATGTTGAAACGGTTTTTCTCAAAGCAATGGCAGAGACTGGGCAGATAAAGCTTTACGGTGAACAACCAACATTAGCAGAAACTTCTCTGTACAGGGCTCGTCGACATCTTTATAAGGAAGAAAGACTTCAAGCTGAACAGGAAAGATTGGAGAGAGTAGGTCCCATAGCATTCTACTCAGAATGGGTCAAAGCTTGGAAGGCAGATACTTCAATGGATGCCATAAAAAAACATTTTGAAGAGACTGGAGAAGATCAAAACACGCAAATGATCGAAATGTTCCAAAACCAAACTGAGAAAGAGTTTCGCATTATGATGGGGACTGATATTCGCATCCGCAGGGATCCGTTGGCAATGCGTATGCGGGAAGATCAGATTAAGCAAATATGGGGTGGTGATCCTGTGTACCCTACCGTCAACTACATTCAAGATCCTGATGAAATCATTGATTATAGGGGTCCAGATTTTCATGAACCAACACCTGACATGCTAGATTATCTGAAGGAGCATGGTAAAATTATATCAAGAGAGGAGCTTGAAGAAATTCTGGGTAAAGAAAAAAACGAGGAGCTTGAGGTGACTGATATGGATGATGCCATGGCCCAAGCTATTGATATCGGTGAAAATGACGATGGAGAGGATAGTGAGGTTGAGGTCGATGAAGACGCAGAGGAAAAAATCAATCGCAACTGGAGTGTCTTGAAAAGTAGTCCCCACCTCAACAAGTCAAAGGGGAAGCCTAAAAAGGAGGATCCAACAGCATCACTGGATGGAGCGGTTGATGACTCAGAGAACTTGACTGATTTTCTTATGGACTTCGAAGAAGATGAGTGA

Coding sequence (CDS)

ATGGCTTCGATATCTACTCCATGTCTCTATCCAGATAGAGGCTGGAAGGGAGTAGTTTCTGCAAATGAATGTGTTGGCGGGACATCTTTATCCAATTTTCCAAAGACTCCATTTGTAGGGTCATTTCCGTCGCGGATACTGCTAATTGGAAGTGCATTGAACAAATCACTGCATAGAAATCAGTTGGTTCCTTGCATCAAGTGTGAGAACAATGATGAATCCTATGAAGAAGTATCAGTGGAGCGTCCACCATACCATGTTTACATGGACTCGACTTCTGGGCAGCTTGAACCAGCTTCGGGGGCACGTGCAAGTATTCCGGGAGAAGAATACTGGCCAGAAGGAACTGCTAGTCGAGTTAGAGCGGCAAGATCTCCCGAACCAACTGGAAGTAGGAGAAAGAAAAATAGAACACTAGCAGCTGTTGCACATGATTCATCCGAAGTGACTGAAATAGATTCTAGTGACCTTATGATCACTGACATTTCTGAGGATTTAATAGAAGAGCCTAAAGATGCTACTTCGCAGTATGTTGTTTATCAGACAGAACCTGATGAGGAAGCAACTGGGTTTGATTTAGATAAGAAACTTGGAAATCCCCATCCATTCATTGACCCTGAAAAGAAGAAGCCAATTGAGGAGCCGCGTACTAGTGAAGAACTTTGGTGGAATTGGAGAAAGCCAGAAAAAGAACAATGGTCTAGGTGGCAAAGGAGGAAACCAGATGTTGAAACGGTTTTTCTCAAAGCAATGGCAGAGACTGGGCAGATAAAGCTTTACGGTGAACAACCAACATTAGCAGAAACTTCTCTGTACAGGGCTCGTCGACATCTTTATAAGGAAGAAAGACTTCAAGCTGAACAGGAAAGATTGGAGAGAGTAGGTCCCATAGCATTCTACTCAGAATGGGTCAAAGCTTGGAAGGCAGATACTTCAATGGATGCCATAAAAAAACATTTTGAAGAGACTGGAGAAGATCAAAACACGCAAATGATCGAAATGTTCCAAAACCAAACTGAGAAAGAGTTTCGCATTATGATGGGGACTGATATTCGCATCCGCAGGGATCCGTTGGCAATGCGTATGCGGGAAGATCAGATTAAGCAAATATGGGGTGGTGATCCTGTGTACCCTACCGTCAACTACATTCAAGATCCTGATGAAATCATTGATTATAGGGGTCCAGATTTTCATGAACCAACACCTGACATGCTAGATTATCTGAAGGAGCATGGTAAAATTATATCAAGAGAGGAGCTTGAAGAAATTCTGGGTAAAGAAAAAAACGAGGAGCTTGAGGTGACTGATATGGATGATGCCATGGCCCAAGCTATTGATATCGGTGAAAATGACGATGGAGAGGATAGTGAGGTTGAGGTCGATGAAGACGCAGAGGAAAAAATCAATCGCAACTGGAGTGTCTTGAAAAGTAGTCCCCACCTCAACAAGTCAAAGGGGAAGCCTAAAAAGGAGGATCCAACAGCATCACTGGATGGAGCGGTTGATGACTCAGAGAACTTGACTGATTTTCTTATGGACTTCGAAGAAGATGAGTGA

Protein sequence

MASISTPCLYPDRGWKGVVSANECVGGTSLSNFPKTPFVGSFPSRILLIGSALNKSLHRNQLVPCIKCENNDESYEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARSPEPTGSRRKKNRTLAAVAHDSSEVTEIDSSDLMITDISEDLIEEPKDATSQYVVYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERLQAEQERLERVGPIAFYSEWVKAWKADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDMLDYLKEHGKIISREELEEILGKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEVDEDAEEKINRNWSVLKSSPHLNKSKGKPKKEDPTASLDGAVDDSENLTDFLMDFEEDE

Homology

[Close]

BLAST of Sed0012577 vs. NCBI nr
Match: XP_038883750.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Benincasa hispida])

HSP 1 Score: 929.9 bits (2402), Expect = 9.8e-267
Identity = 471/531 (88.70%), Postives = 492/531 (92.66%), Query Frame = 0


Query: 1   MASISTPCLYPDRGWKGVVSANECVGGTSLSNFPKTPFVGSFPSRILLIGSALNKSLHRN 60
           MAS+STPCLYPDRGW GV  AN CVGG SLSNF KTPFVGSFP  +LL G+ALNK L RN
Sbjct: 1   MASLSTPCLYPDRGWNGVFYANGCVGGKSLSNFLKTPFVGSFPVGLLLAGNALNKPLQRN 60

Query: 61  QLVPCIKCENNDESYEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
           QLVPCIK EN DESYE+VSVERPPYH YMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIKGENRDESYEDVSVERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 121 RAARSPEPT-------------GSRRKKNRTLAAVAHDSSEVTEIDSSDLMITDISEDLI 180
           RAAR+PEPT             GSRRKKNRTLAAVAHDSSEVTE+DSSDL+I+DISEDLI
Sbjct: 121 RAARAPEPTGASVGSPSYGQNPGSRRKKNRTLAAVAHDSSEVTEVDSSDLVISDISEDLI 180

Query: 181 EEPKDATSQYVVYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240
           EEPKDATSQYVVY+TEPDEE TGFDLDKKLGNPHPFIDP KKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDATSQYVVYRTEPDEEETGFDLDKKLGNPHPFIDPVKKKPIEEPRTSEELWWNWRK 240

Query: 241 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERLQAE 300
           PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGE PTL E SLYRARRHLYKEERLQAE
Sbjct: 241 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERLQAE 300

Query: 301 QERLERVGPIAFYSEWVKAWKADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEFRIMM 360
           QERLER+GPIAFYSEWVKAWK DTS DAIKKHFEETGED+NTQMIEMFQNQTE+EFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMM 360

Query: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDMLDY 420
           GTDIRIRRDPLAMRM+EDQIKQIWGGDPVYPT+NYIQDP+EIIDYRGPDFHEPTPDMLD+
Sbjct: 361 GTDIRIRRDPLAMRMQEDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPDMLDF 420

Query: 421 LKEHGKIISREELEEILGKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEVDEDAEEK 480
           LKEHGKIISREEL+EIL KEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVE DE+AEEK
Sbjct: 421 LKEHGKIISREELQEILAKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEGDEEAEEK 480

Query: 481 INRNWSVLKSSPHLNKSKGKPKKEDPTASLDGAVDDSENLTDFLMDFEEDE 519
           I RNWSVLKSSPHLNK KGKPKKEDP ASL+GA+D+SENLTDFLMDFEEDE
Sbjct: 481 ITRNWSVLKSSPHLNKPKGKPKKEDP-ASLEGAIDNSENLTDFLMDFEEDE 530

[Close]

BLAST of Sed0012577 vs. NCBI nr
Match: KAG7026443.1 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 922.2 bits (2382), Expect = 2.0e-264
Identity = 470/531 (88.51%), Postives = 489/531 (92.09%), Query Frame = 0


Query: 1   MASISTPCLYPDRGWKGVVSANECVGGTSLSNFPKTPFVGSFPSRILLIGSALNKSLHRN 60
           MAS+STPCLYPDRG KGV  AN CVGG  LSNFPKTPFVGSFP R++L+G+AL KSL RN
Sbjct: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 60

Query: 61  QLVPCIKCENNDESYEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
           QLVPCIKCEN DESYE+VSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 121 RAARSPEPT-------------GSRRKKNRTLAAVAHDSSEVTEIDSSDLMITDISEDLI 180
           RAAR+P PT             GSRRKKNRT AAVA DSSEVTE+DSSD  I DISEDLI
Sbjct: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLI 180

Query: 181 EEPKDATSQYVVYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240
           EEPKDATSQYVVY+TEPD+E TGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240

Query: 241 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERLQAE 300
           PEKEQWSRWQRRK DVETVFLKAMAETGQIKLYGE PTL ETSLYRARRHL+KEERLQAE
Sbjct: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300

Query: 301 QERLERVGPIAFYSEWVKAWKADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEFRIMM 360
           QERLER+GPIAFYSEWVK WK DTS DAI+KHFEETGEDQNTQMIEMFQNQTE+EFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360

Query: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDMLDY 420
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDP+EIIDYRGPDF EPTPDMLDY
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420

Query: 421 LKEHGKIISREELEEILGKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEVDEDAEEK 480
           LKEHGKIISR ELEEIL KEKNEELEVTD+DDAM+QAIDIGENDDGEDSEVE DE+AEEK
Sbjct: 421 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 480

Query: 481 INRNWSVLKSSPHLNKSKGKPKKEDPTASLDGAVDDSENLTDFLMDFEEDE 519
           I RNWSVLKSSPHLNKSKGKPKKEDP ASL+GAVDDSENLTDFLMDFEEDE
Sbjct: 481 ITRNWSVLKSSPHLNKSKGKPKKEDP-ASLEGAVDDSENLTDFLMDFEEDE 530

[Close]

BLAST of Sed0012577 vs. NCBI nr
Match: KAG6594437.1 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 922.2 bits (2382), Expect = 2.0e-264
Identity = 470/531 (88.51%), Postives = 489/531 (92.09%), Query Frame = 0


Query: 1   MASISTPCLYPDRGWKGVVSANECVGGTSLSNFPKTPFVGSFPSRILLIGSALNKSLHRN 60
           MAS+STPCLYPDRG KGV  AN CVGG  LSNFPKTPFVGSFP R++L+G+AL KSL RN
Sbjct: 69  MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 128

Query: 61  QLVPCIKCENNDESYEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
           QLVPCIKCEN DESYE+VSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 129 QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 188

Query: 121 RAARSPEPT-------------GSRRKKNRTLAAVAHDSSEVTEIDSSDLMITDISEDLI 180
           RAAR+P PT             GSRRKKNRT AAVA DSSEVTE+DSSD  I DISEDLI
Sbjct: 189 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLI 248

Query: 181 EEPKDATSQYVVYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240
           EEPKDATSQYVVY+TEPD+E TGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK
Sbjct: 249 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 308

Query: 241 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERLQAE 300
           PEKEQWSRWQRRK DVETVFLKAMAETGQIKLYGE PTL ETSLYRARRHL+KEERLQAE
Sbjct: 309 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 368

Query: 301 QERLERVGPIAFYSEWVKAWKADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEFRIMM 360
           QERLER+GPIAFYSEWVK WK DTS DAI+KHFEETGEDQNTQMIEMFQNQTE+EFRIMM
Sbjct: 369 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 428

Query: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDMLDY 420
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDP+EIIDYRGPDF EPTPDMLDY
Sbjct: 429 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 488

Query: 421 LKEHGKIISREELEEILGKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEVDEDAEEK 480
           LKEHGKIISR ELEEIL KEKNEELEVTD+DDAM+QAIDIGENDDGEDSEVE DE+AEEK
Sbjct: 489 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 548

Query: 481 INRNWSVLKSSPHLNKSKGKPKKEDPTASLDGAVDDSENLTDFLMDFEEDE 519
           I RNWSVLKSSPHLNKSKGKPKKEDP ASL+GAVDDSENLTDFLMDFEEDE
Sbjct: 549 ITRNWSVLKSSPHLNKSKGKPKKEDP-ASLEGAVDDSENLTDFLMDFEEDE 598

[Close]

BLAST of Sed0012577 vs. NCBI nr
Match: XP_022926613.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Cucurbita moschata])

HSP 1 Score: 920.2 bits (2377), Expect = 7.8e-264
Identity = 469/531 (88.32%), Postives = 488/531 (91.90%), Query Frame = 0


Query: 1   MASISTPCLYPDRGWKGVVSANECVGGTSLSNFPKTPFVGSFPSRILLIGSALNKSLHRN 60
           MAS+STPCLYPDRG KGV  AN CVGG  LSNFPKTPFVGSFP R++L+G+AL KSL RN
Sbjct: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 60

Query: 61  QLVPCIKCENNDESYEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
           QLVPCIKCEN DESYE+VSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 121 RAARSPEPT-------------GSRRKKNRTLAAVAHDSSEVTEIDSSDLMITDISEDLI 180
           RAAR+P PT             GSRRKKNRT AAVA DSSEVTE+DSSD  I DISEDLI
Sbjct: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLI 180

Query: 181 EEPKDATSQYVVYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240
           EEPKDATSQYVVY+TEPD+E TGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240

Query: 241 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERLQAE 300
           PEKEQWSRWQRRK DVETVFLKAMAETGQIKLYGE PTL ETSLYRARRHL+KEERLQAE
Sbjct: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300

Query: 301 QERLERVGPIAFYSEWVKAWKADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEFRIMM 360
           QERLER+GPIAFYSEWVK WK DTS DAI+KHFEETGEDQNTQMIEMFQNQTE+EFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360

Query: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDMLDY 420
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDP+EIIDYRGPDF EPTPDMLDY
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420

Query: 421 LKEHGKIISREELEEILGKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEVDEDAEEK 480
           LKEHGKIISR ELEEIL KEKNEELEVTD+DDAM+QAIDIGENDDGEDSEVE DE+AEEK
Sbjct: 421 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 480

Query: 481 INRNWSVLKSSPHLNKSKGKPKKEDPTASLDGAVDDSENLTDFLMDFEEDE 519
           I RNWSVLKSSPHLN SKGKPKKEDP ASL+GAVDDSENLTDFLMDFEEDE
Sbjct: 481 ITRNWSVLKSSPHLNNSKGKPKKEDP-ASLEGAVDDSENLTDFLMDFEEDE 530

[Close]

BLAST of Sed0012577 vs. NCBI nr
Match: XP_008439585.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 [Cucumis melo])

HSP 1 Score: 919.5 bits (2375), Expect = 1.3e-263
Identity = 466/534 (87.27%), Postives = 489/534 (91.57%), Query Frame = 0


Query: 1   MASISTPCLYPDRGWKGVVSANECVGGTSLSNFPKTPFVGSFPSRILLIG---SALNKSL 60
           MAS+STPCLYPDRG  GV  AN C+GG  LSNF KTPFVGSFP R+LL+G   +ALNKS 
Sbjct: 1   MASLSTPCLYPDRGRNGVFYANGCIGGKPLSNFLKTPFVGSFPVRLLLVGNAANALNKSP 60

Query: 61  HRNQLVPCIKCENNDESYEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTA 120
            RNQLVPCIKCEN DESYE+V+VERPPYH YMDSTSGQLEPASGARASIPGEEYWPEGTA
Sbjct: 61  QRNQLVPCIKCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTA 120

Query: 121 SRVRAARSPEPT-------------GSRRKKNRTLAAVAHDSSEVTEIDSSDLMITDISE 180
           SRVRAAR+PEPT             GSRRKKNRTLAA AHDSSEVTE+ SSDL+I++ISE
Sbjct: 121 SRVRAARAPEPTGVSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVQSSDLVISEISE 180

Query: 181 DLIEEPKDATSQYVVYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWN 240
           D IEEPKD TSQYVVYQTEPDEE TGFDLDKK+GNPHPFIDPEKKKPIEEPRTSEELWWN
Sbjct: 181 DFIEEPKDDTSQYVVYQTEPDEEVTGFDLDKKIGNPHPFIDPEKKKPIEEPRTSEELWWN 240

Query: 241 WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERL 300
           WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTL E SLYRARRHLYKEERL
Sbjct: 241 WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLTEVSLYRARRHLYKEERL 300

Query: 301 QAEQERLERVGPIAFYSEWVKAWKADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEFR 360
           QAE+ERLER GPIAFYSEWVKAWK DTS DAIKKHFEETGED+NTQMIEMFQNQTE+EFR
Sbjct: 301 QAEEERLERTGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFR 360

Query: 361 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDM 420
           IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDP+EIIDYRGPDFHEPTPDM
Sbjct: 361 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPDM 420

Query: 421 LDYLKEHGKIISREELEEILGKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEVDEDA 480
           LD+LKEHGKIISREEL+EIL KEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVE DE+A
Sbjct: 421 LDFLKEHGKIISREELQEILAKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVERDEEA 480

Query: 481 EEKINRNWSVLKSSPHLNKSKGKPKKEDPTASLDGAVDDSENLTDFLMDFEEDE 519
           EEKI RNWSVLKSSPHLNK KGKP K+DP ASLDGA+D+SENLTDFLMDFEEDE
Sbjct: 481 EEKITRNWSVLKSSPHLNKQKGKPNKKDP-ASLDGAIDESENLTDFLMDFEEDE 533

[Close]

BLAST of Sed0012577 vs. ExPASy Swiss-Prot
Match: F4IHY7 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC12 PE=1 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 7.0e-175
Identity = 328/505 (64.95%), Postives = 395/505 (78.22%), Query Frame = 0


Query: 42  FPSRILLIG-SALNKSLHRNQLVPCIKCENND-------------ESYEEVSVERPPYHV 101
           FP + L  G ++ ++SL       CIKC+  D             E +E V+VER PYH 
Sbjct: 35  FPLKTLHAGITSRDRSLRH-----CIKCKKEDGDGDVSEGSKKSEEGFEYVTVERHPYHS 94

Query: 102 YMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARSPEPT-------------GSRRK 161
           YMDSTSG+LEPASGARASIPGE+YWPEGT+SRVRAAR+P+P              GSRRK
Sbjct: 95  YMDSTSGKLEPASGARASIPGEDYWPEGTSSRVRAARAPQPAGESSSFPSYGKNPGSRRK 154

Query: 162 KNRTLAAVAHDSSEVTEIDSSDLMITDISEDLIEEPKDATSQYVVYQT--EPDEEATGFD 221
           KNR        + E   ++++D  ++D  +   EE  D++  +V Y+   E +EE TGF+
Sbjct: 155 KNRKA------TEENVTVETND-EVSDSEDSSEEEENDSSDGFVTYKNEFEREEEETGFE 214

Query: 222 LDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMA 281
           LDKKLG PHPFIDP KKK IE+  TS+E WWNWRKPEKEQWSRWQRR+PDVETVFLKAMA
Sbjct: 215 LDKKLGRPHPFIDPTKKKQIEKTLTSDESWWNWRKPEKEQWSRWQRRRPDVETVFLKAMA 274

Query: 282 ETGQIKLYGEQPTLAETSLYRARRHLYKEERLQAEQERLERVGPIAFYSEWVKAWKADTS 341
           ETGQ+KLYGE+PTL ETSLYRARRHL+KEERLQAE+ERL + GP+AFYSEWVKAWK DTS
Sbjct: 275 ETGQVKLYGEEPTLTETSLYRARRHLFKEERLQAERERLAKEGPMAFYSEWVKAWKRDTS 334

Query: 342 MDAIKKHFEETGEDQNTQMIEMFQNQTEKEFRIMMGTDIRIRRDPLAMRMREDQIKQIWG 401
            +A++KHFEETGED+NTQ+IEMF +QT++E+RIMMGTDIRI+RDPLAMRMREDQIKQIWG
Sbjct: 335 REAVQKHFEETGEDENTQLIEMFSHQTDREYRIMMGTDIRIKRDPLAMRMREDQIKQIWG 394

Query: 402 GDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDMLDYLKEHGKIISREELEEILGKEKNEEL 461
           GDPVYPT+NYIQDP+ ++D+RGPDFHEPTP+ML YLKE+GK+ISRE  E +L KEK E+L
Sbjct: 395 GDPVYPTINYIQDPNAVMDFRGPDFHEPTPNMLSYLKENGKVISREMHEALLTKEKTEQL 454

Query: 462 EVTDMDDAMAQAIDIGENDDGEDSEVEVDEDAEEKINRNWSVLKSSPHLNKSKGKPKKED 518
           EV DMDDAMAQA+DIGENDD ED + +V++D +EK+ RNWSVLK +P L  +K KPKKE 
Sbjct: 455 EVPDMDDAMAQAVDIGENDDDED-DADVEKD-DEKVPRNWSVLKETPELRTAKPKPKKEG 514

[Close]

BLAST of Sed0012577 vs. ExPASy Swiss-Prot
Match: B4FZ81 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Zea mays OX=4577 GN=PTAC12 PE=1 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 3.4e-145
Identity = 279/501 (55.69%), Postives = 361/501 (72.06%), Query Frame = 0


Query: 66  IKCENNDE-SYEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAAR 125
           IKC  +D   ++   +E PPY  Y DSTSGQLEPASGARASIPG+EYWPEGTA+RVRAAR
Sbjct: 57  IKCVKDDSLHFDPSKIEPPPYSSYFDSTSGQLEPASGARASIPGKEYWPEGTAARVRAAR 116

Query: 126 SPEPT-------------GSRRK--KNRTLAAVAHDSSEVTEI---DSSDLMITDISEDL 185
           +P P              GSRR+  K +  +A   + ++  +    D  D+ I    +D 
Sbjct: 117 APAPVGESAGMPSFGTKPGSRRRGYKEQVTSASGTEGAQTDDRKDGDEPDVAIIGSGDDA 176

Query: 186 IEEPKDATSQYVVYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWR 245
           +EE KD+  +YV+Y+T  +EE + +D+DK +G PHPFIDP K   + EP+TSEELWW+WR
Sbjct: 177 LEEIKDSVDEYVIYETPEEEELSEYDMDKMMGRPHPFIDPAKAMSLGEPKTSEELWWHWR 236

Query: 246 K--PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERL 305
           +   E+E WSRWQRR+PDV+TVF KAMAETGQIK++G+ P+  E +L + RRHLYKEERL
Sbjct: 237 RKSQEEEMWSRWQRRRPDVDTVFAKAMAETGQIKIFGDHPSRTEAALAKTRRHLYKEERL 296

Query: 306 QAEQERLERVGPIAFYSEWVKAWK-ADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEF 365
           +AEQ RLE +GPIA+YSEWV+A+K  DTS +AI+KHFEETGED+N Q+I+MFQ+QT  E+
Sbjct: 297 EAEQRRLEEIGPIAYYSEWVEAYKNKDTSREAIQKHFEETGEDENVQLIKMFQHQTAGEY 356

Query: 366 RIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPD 425
           RIMMGTD+RI+RDPLAMRMREDQIKQIWGGDPVYPT+NY+QDPDE+IDYRGP+FHEPTP+
Sbjct: 357 RIMMGTDVRIQRDPLAMRMREDQIKQIWGGDPVYPTINYVQDPDEVIDYRGPEFHEPTPE 416

Query: 426 MLDYLKEHGKIISREELEEILGKEK---NEELE-VTDMDDAMAQAIDIGE---NDDGEDS 485
           ++ YL EHG +I++EEL   L +E+   N+++  + +  D MA AIDIGE   N+D +D 
Sbjct: 417 VVPYLMEHGIMITKEELYARLNEEREDVNQDITYIPEAKDPMATAIDIGEHSYNEDSDDE 476

Query: 486 EVEVDE-------------------DAEEKINRNWSVLKSSPHLNKSKGKPKKEDPTASL 519
           + +VD+                   + EEK+N+NWS LKS+    K K K KK++ T  L
Sbjct: 477 DEDVDKAAAQPQSLEDEEDDRDDVAEVEEKVNQNWSALKSTGQAEKPKEKSKKDEMT--L 536

[Close]

BLAST of Sed0012577 vs. ExPASy Swiss-Prot
Match: Q0JIZ1 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PTAC12 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 7.1e-143
Identity = 277/493 (56.19%), Postives = 349/493 (70.79%), Query Frame = 0


Query: 75  YEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARSPEPT----- 134
           ++   +E PPY  Y DSTSGQLEPASGARASIPG+EYWPEGTASRVRAAR+P P      
Sbjct: 65  FDPSKIEAPPYSSYFDSTSGQLEPASGARASIPGQEYWPEGTASRVRAARAPAPVGESAG 124

Query: 135 --------GSRRK--KNRTLAAVAHDSSEVTEIDSSDLMITDISED-LIEEPKDATSQYV 194
                   GSRRK  K +  +A A   +E +  +   ++  + S D  +EE KD+  +YV
Sbjct: 125 TPSFGKKPGSRRKGYKEQVASATAGRGTETSGDEGESVVAIEASSDETLEETKDSLDEYV 184

Query: 195 VYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK--PEKEQWSRW 254
           VY+   +E  + +++DK +G PHPF+DP+K   + EP++SEELWWNWR+   E E WSRW
Sbjct: 185 VYEMPKEENLSEYEMDKMMGRPHPFVDPQKAMSVGEPKSSEELWWNWRRKSEENEMWSRW 244

Query: 255 QRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERLQAEQERLERVGP 314
           QRR+PDV+TVF KAMAETGQIK++G+ PT  E +L +ARRHL+KEERL+AEQ RLE +GP
Sbjct: 245 QRRRPDVDTVFAKAMAETGQIKIFGDHPTRTEAALAKARRHLFKEERLEAEQRRLEEIGP 304

Query: 315 IAFYSEWVKAWK-ADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEFRIMMGTDIRIRR 374
           IA+YSEWV+A+K  DTS +A++KHFEETGED+NTQ+I MFQ+QT  EFRIMMGTD+RI+R
Sbjct: 305 IAYYSEWVEAYKNKDTSREAVQKHFEETGEDENTQLITMFQHQTAGEFRIMMGTDVRIQR 364

Query: 375 DPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDMLDYLKEHGKII 434
           DPLAMRMREDQIKQIWGGDPVYPT+NY+ DPDE+ DYRGP+FHEPTP+++ YL EHG +I
Sbjct: 365 DPLAMRMREDQIKQIWGGDPVYPTINYVHDPDEVADYRGPEFHEPTPEVVPYLMEHGIMI 424

Query: 435 SREELEEILGKEKNEELEVTDMD--------DAMAQAIDIGE---NDDGEDSEVEVD--- 494
           ++EEL   L    NEE+E  + D        D MA A+DIGE   N+D +D E + D   
Sbjct: 425 TKEELYARL----NEEMEDINQDITYLPEVRDPMATAVDIGEHSYNEDSDDDEEDADKVV 484

Query: 495 ----------------EDAEEKINRNWSVLKSSPHLNKSKGKPKKEDPTASLDGAVDDSE 519
                           EDAE K++RNWSVLK++      K K KK+    SL  A+ DSE
Sbjct: 485 AQPESLEDDEDDGDDAEDAEGKVSRNWSVLKTTGQAENPKEKSKKDQ--LSLKEAIADSE 544

[Close]

BLAST of Sed0012577 vs. ExPASy TrEMBL
Match: A0A6J1EIK5 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433691 PE=4 SV=1)

HSP 1 Score: 920.2 bits (2377), Expect = 3.8e-264
Identity = 469/531 (88.32%), Postives = 488/531 (91.90%), Query Frame = 0


Query: 1   MASISTPCLYPDRGWKGVVSANECVGGTSLSNFPKTPFVGSFPSRILLIGSALNKSLHRN 60
           MAS+STPCLYPDRG KGV  AN CVGG  LSNFPKTPFVGSFP R++L+G+AL KSL RN
Sbjct: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 60

Query: 61  QLVPCIKCENNDESYEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
           QLVPCIKCEN DESYE+VSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 121 RAARSPEPT-------------GSRRKKNRTLAAVAHDSSEVTEIDSSDLMITDISEDLI 180
           RAAR+P PT             GSRRKKNRT AAVA DSSEVTE+DSSD  I DISEDLI
Sbjct: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLI 180

Query: 181 EEPKDATSQYVVYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240
           EEPKDATSQYVVY+TEPD+E TGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240

Query: 241 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERLQAE 300
           PEKEQWSRWQRRK DVETVFLKAMAETGQIKLYGE PTL ETSLYRARRHL+KEERLQAE
Sbjct: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300

Query: 301 QERLERVGPIAFYSEWVKAWKADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEFRIMM 360
           QERLER+GPIAFYSEWVK WK DTS DAI+KHFEETGEDQNTQMIEMFQNQTE+EFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360

Query: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDMLDY 420
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDP+EIIDYRGPDF EPTPDMLDY
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420

Query: 421 LKEHGKIISREELEEILGKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEVDEDAEEK 480
           LKEHGKIISR ELEEIL KEKNEELEVTD+DDAM+QAIDIGENDDGEDSEVE DE+AEEK
Sbjct: 421 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 480

Query: 481 INRNWSVLKSSPHLNKSKGKPKKEDPTASLDGAVDDSENLTDFLMDFEEDE 519
           I RNWSVLKSSPHLN SKGKPKKEDP ASL+GAVDDSENLTDFLMDFEEDE
Sbjct: 481 ITRNWSVLKSSPHLNNSKGKPKKEDP-ASLEGAVDDSENLTDFLMDFEEDE 530

[Close]

BLAST of Sed0012577 vs. ExPASy TrEMBL
Match: A0A1S3AZS1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484338 PE=4 SV=1)

HSP 1 Score: 919.5 bits (2375), Expect = 6.4e-264
Identity = 466/534 (87.27%), Postives = 489/534 (91.57%), Query Frame = 0


Query: 1   MASISTPCLYPDRGWKGVVSANECVGGTSLSNFPKTPFVGSFPSRILLIG---SALNKSL 60
           MAS+STPCLYPDRG  GV  AN C+GG  LSNF KTPFVGSFP R+LL+G   +ALNKS 
Sbjct: 1   MASLSTPCLYPDRGRNGVFYANGCIGGKPLSNFLKTPFVGSFPVRLLLVGNAANALNKSP 60

Query: 61  HRNQLVPCIKCENNDESYEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTA 120
            RNQLVPCIKCEN DESYE+V+VERPPYH YMDSTSGQLEPASGARASIPGEEYWPEGTA
Sbjct: 61  QRNQLVPCIKCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTA 120

Query: 121 SRVRAARSPEPT-------------GSRRKKNRTLAAVAHDSSEVTEIDSSDLMITDISE 180
           SRVRAAR+PEPT             GSRRKKNRTLAA AHDSSEVTE+ SSDL+I++ISE
Sbjct: 121 SRVRAARAPEPTGVSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVQSSDLVISEISE 180

Query: 181 DLIEEPKDATSQYVVYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWN 240
           D IEEPKD TSQYVVYQTEPDEE TGFDLDKK+GNPHPFIDPEKKKPIEEPRTSEELWWN
Sbjct: 181 DFIEEPKDDTSQYVVYQTEPDEEVTGFDLDKKIGNPHPFIDPEKKKPIEEPRTSEELWWN 240

Query: 241 WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERL 300
           WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTL E SLYRARRHLYKEERL
Sbjct: 241 WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLTEVSLYRARRHLYKEERL 300

Query: 301 QAEQERLERVGPIAFYSEWVKAWKADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEFR 360
           QAE+ERLER GPIAFYSEWVKAWK DTS DAIKKHFEETGED+NTQMIEMFQNQTE+EFR
Sbjct: 301 QAEEERLERTGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFR 360

Query: 361 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDM 420
           IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDP+EIIDYRGPDFHEPTPDM
Sbjct: 361 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPDM 420

Query: 421 LDYLKEHGKIISREELEEILGKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEVDEDA 480
           LD+LKEHGKIISREEL+EIL KEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVE DE+A
Sbjct: 421 LDFLKEHGKIISREELQEILAKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVERDEEA 480

Query: 481 EEKINRNWSVLKSSPHLNKSKGKPKKEDPTASLDGAVDDSENLTDFLMDFEEDE 519
           EEKI RNWSVLKSSPHLNK KGKP K+DP ASLDGA+D+SENLTDFLMDFEEDE
Sbjct: 481 EEKITRNWSVLKSSPHLNKQKGKPNKKDP-ASLDGAIDESENLTDFLMDFEEDE 533

[Close]

BLAST of Sed0012577 vs. ExPASy TrEMBL
Match: A0A5D3CSY1 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009320 PE=4 SV=1)

HSP 1 Score: 919.1 bits (2374), Expect = 8.4e-264
Identity = 466/534 (87.27%), Postives = 489/534 (91.57%), Query Frame = 0


Query: 1   MASISTPCLYPDRGWKGVVSANECVGGTSLSNFPKTPFVGSFPSRILLIG---SALNKSL 60
           MAS+STPCLYPDRG  GV  AN C+GG  LSNF KTPFVGSFP R+LL+G   +ALNKS 
Sbjct: 32  MASLSTPCLYPDRGRNGVFYANGCIGGKPLSNFLKTPFVGSFPVRLLLVGNAANALNKSP 91

Query: 61  HRNQLVPCIKCENNDESYEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTA 120
            RNQLVPCIKCEN DESYE+V+VERPPYH YMDSTSGQLEPASGARASIPGEEYWPEGTA
Sbjct: 92  QRNQLVPCIKCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTA 151

Query: 121 SRVRAARSPEPT-------------GSRRKKNRTLAAVAHDSSEVTEIDSSDLMITDISE 180
           SRVRAAR+PEPT             GSRRKKNRTLAA AHDSSEVTE+ SSDL+I++ISE
Sbjct: 152 SRVRAARAPEPTGVSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVQSSDLVISEISE 211

Query: 181 DLIEEPKDATSQYVVYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWN 240
           D IEEPKD TSQYVVYQTEPDEE TGFDLDKK+GNPHPFIDPEKKKPIEEPRTSEELWWN
Sbjct: 212 DFIEEPKDDTSQYVVYQTEPDEEVTGFDLDKKVGNPHPFIDPEKKKPIEEPRTSEELWWN 271

Query: 241 WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERL 300
           WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTL E SLYRARRHLYKEERL
Sbjct: 272 WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLTEVSLYRARRHLYKEERL 331

Query: 301 QAEQERLERVGPIAFYSEWVKAWKADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEFR 360
           QAE+ERLER GPIAFYSEWVKAWK DTS DAIKKHFEETGED+NTQMIEMFQNQTE+EFR
Sbjct: 332 QAEEERLERTGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFR 391

Query: 361 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDM 420
           IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDP+EIIDYRGPDFHEPTPDM
Sbjct: 392 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPDM 451

Query: 421 LDYLKEHGKIISREELEEILGKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEVDEDA 480
           LD+LKEHGKIISREEL+EIL KEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVE DE+A
Sbjct: 452 LDFLKEHGKIISREELQEILAKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVERDEEA 511

Query: 481 EEKINRNWSVLKSSPHLNKSKGKPKKEDPTASLDGAVDDSENLTDFLMDFEEDE 519
           EEKI RNWSVLKSSPHLNK KGKP K+DP ASLDGA+D+SENLTDFLMDFEEDE
Sbjct: 512 EEKITRNWSVLKSSPHLNKQKGKPNKKDP-ASLDGAIDESENLTDFLMDFEEDE 564

[Close]

BLAST of Sed0012577 vs. ExPASy TrEMBL
Match: A0A6J1KRU0 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111497065 PE=4 SV=1)

HSP 1 Score: 918.3 bits (2372), Expect = 1.4e-263
Identity = 467/531 (87.95%), Postives = 488/531 (91.90%), Query Frame = 0


Query: 1   MASISTPCLYPDRGWKGVVSANECVGGTSLSNFPKTPFVGSFPSRILLIGSALNKSLHRN 60
           MAS+STPCLYPDRG KGV  AN CVGG  LSNFPKTPFVGSFP R++L+G+AL KSL +N
Sbjct: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQKN 60

Query: 61  QLVPCIKCENNDESYEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
           QLVPCI+CEN DESYE+VSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIRCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 121 RAARSPEPT-------------GSRRKKNRTLAAVAHDSSEVTEIDSSDLMITDISEDLI 180
           RAAR+P PT             GSRRKKNRT AAV  DSSEVTE+DSSD  I DISEDLI
Sbjct: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVGSDSSEVTEVDSSDSEIPDISEDLI 180

Query: 181 EEPKDATSQYVVYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240
           EEPKDATSQYVVY+TEPD+E TGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240

Query: 241 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERLQAE 300
           PEKEQWSRWQRRK DVETVFLKAMAETGQIKLYGE PTL ETSLYRARRHL+KEERLQAE
Sbjct: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300

Query: 301 QERLERVGPIAFYSEWVKAWKADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEFRIMM 360
           QERLER+GPIAFYSEWVK WK DTS DAI+KHFEETGEDQNTQMIEMFQNQTE+EFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360

Query: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDMLDY 420
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDP+EIIDYRGPDF EPTPDMLDY
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420

Query: 421 LKEHGKIISREELEEILGKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEVDEDAEEK 480
           LKEHGKIISR ELEEIL KEKNEELEVTD+DDAM+QAIDIGENDDGEDSEVE DE+AEEK
Sbjct: 421 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 480

Query: 481 INRNWSVLKSSPHLNKSKGKPKKEDPTASLDGAVDDSENLTDFLMDFEEDE 519
           I RNWSVLKSSPHLNKSKGKPKKEDP ASL+GAVDDSENLTDFLMDFEEDE
Sbjct: 481 ITRNWSVLKSSPHLNKSKGKPKKEDP-ASLEGAVDDSENLTDFLMDFEEDE 530

[Close]

BLAST of Sed0012577 vs. ExPASy TrEMBL
Match: A0A0A0KM32 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524690 PE=4 SV=1)

HSP 1 Score: 916.4 bits (2367), Expect = 5.4e-263
Identity = 461/531 (86.82%), Postives = 488/531 (91.90%), Query Frame = 0


Query: 1   MASISTPCLYPDRGWKGVVSANECVGGTSLSNFPKTPFVGSFPSRILLIGSALNKSLHRN 60
           MAS+STPCLYPDRG  GV  AN CVGG  LSNF KTPF+GSFP R+LL+G+ALNKS  RN
Sbjct: 1   MASLSTPCLYPDRGRNGVFYANGCVGGKPLSNFLKTPFIGSFPVRLLLVGNALNKSPQRN 60

Query: 61  QLVPCIKCENNDESYEEVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
           QLVPCI+CEN DESYE+V+VERPPYH YMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIRCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 121 RAARSPEPT-------------GSRRKKNRTLAAVAHDSSEVTEIDSSDLMITDISEDLI 180
           RAAR+PEPT             GSRRKKNRTLAA AHDSSEVTE+DSSDL+I++ISED I
Sbjct: 121 RAARAPEPTGTSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVDSSDLVISEISEDFI 180

Query: 181 EEPKDATSQYVVYQTEPDEEATGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240
           EEPKD TSQYVVYQTEPDEE TGFDLDKK GNPHPFIDP+KKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDDTSQYVVYQTEPDEEVTGFDLDKKTGNPHPFIDPKKKKPIEEPRTSEELWWNWRK 240

Query: 241 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLAETSLYRARRHLYKEERLQAE 300
           PEKEQWSRWQRRKPDVETVFLKAMA+TGQIKLYGEQPTL E SLYRARRHLYKEERLQAE
Sbjct: 241 PEKEQWSRWQRRKPDVETVFLKAMAQTGQIKLYGEQPTLTEVSLYRARRHLYKEERLQAE 300

Query: 301 QERLERVGPIAFYSEWVKAWKADTSMDAIKKHFEETGEDQNTQMIEMFQNQTEKEFRIMM 360
           QERLER+GPIAFYSEWVK WK DTS DAI+KHFEETGED+NTQMIEMFQNQTE+EFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIRKHFEETGEDENTQMIEMFQNQTEREFRIMM 360

Query: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDMLDY 420
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDP+EIIDYRGPDFHEPTP MLD+
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPGMLDF 420

Query: 421 LKEHGKIISREELEEILGKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEVDEDAEEK 480
           LKEHGKIISREEL+EIL KEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVE DE+AEEK
Sbjct: 421 LKEHGKIISREELQEILAKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEGDEEAEEK 480

Query: 481 INRNWSVLKSSPHLNKSKGKPKKEDPTASLDGAVDDSENLTDFLMDFEEDE 519
           I RNWSVLKSSPHL+K KGKP K+DP ASLDGA+D+SENLTDFLMDFEEDE
Sbjct: 481 ITRNWSVLKSSPHLSKQKGKPNKKDP-ASLDGAIDESENLTDFLMDFEEDE 530

[Close]

BLAST of Sed0012577 vs. TAIR 10
Match: AT2G34640.1 (plastid transcriptionally active 12 )

HSP 1 Score: 615.1 bits (1585), Expect = 5.0e-176
Identity = 328/505 (64.95%), Postives = 395/505 (78.22%), Query Frame = 0


Query: 42  FPSRILLIG-SALNKSLHRNQLVPCIKCENND-------------ESYEEVSVERPPYHV 101
           FP + L  G ++ ++SL       CIKC+  D             E +E V+VER PYH 
Sbjct: 35  FPLKTLHAGITSRDRSLRH-----CIKCKKEDGDGDVSEGSKKSEEGFEYVTVERHPYHS 94

Query: 102 YMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARSPEPT-------------GSRRK 161
           YMDSTSG+LEPASGARASIPGE+YWPEGT+SRVRAAR+P+P              GSRRK
Sbjct: 95  YMDSTSGKLEPASGARASIPGEDYWPEGTSSRVRAARAPQPAGESSSFPSYGKNPGSRRK 154

Query: 162 KNRTLAAVAHDSSEVTEIDSSDLMITDISEDLIEEPKDATSQYVVYQT--EPDEEATGFD 221
           KNR        + E   ++++D  ++D  +   EE  D++  +V Y+   E +EE TGF+
Sbjct: 155 KNRKA------TEENVTVETND-EVSDSEDSSEEEENDSSDGFVTYKNEFEREEEETGFE 214

Query: 222 LDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMA 281
           LDKKLG PHPFIDP KKK IE+  TS+E WWNWRKPEKEQWSRWQRR+PDVETVFLKAMA
Sbjct: 215 LDKKLGRPHPFIDPTKKKQIEKTLTSDESWWNWRKPEKEQWSRWQRRRPDVETVFLKAMA 274

Query: 282 ETGQIKLYGEQPTLAETSLYRARRHLYKEERLQAEQERLERVGPIAFYSEWVKAWKADTS 341
           ETGQ+KLYGE+PTL ETSLYRARRHL+KEERLQAE+ERL + GP+AFYSEWVKAWK DTS
Sbjct: 275 ETGQVKLYGEEPTLTETSLYRARRHLFKEERLQAERERLAKEGPMAFYSEWVKAWKRDTS 334

Query: 342 MDAIKKHFEETGEDQNTQMIEMFQNQTEKEFRIMMGTDIRIRRDPLAMRMREDQIKQIWG 401
            +A++KHFEETGED+NTQ+IEMF +QT++E+RIMMGTDIRI+RDPLAMRMREDQIKQIWG
Sbjct: 335 REAVQKHFEETGEDENTQLIEMFSHQTDREYRIMMGTDIRIKRDPLAMRMREDQIKQIWG 394

Query: 402 GDPVYPTVNYIQDPDEIIDYRGPDFHEPTPDMLDYLKEHGKIISREELEEILGKEKNEEL 461
           GDPVYPT+NYIQDP+ ++D+RGPDFHEPTP+ML YLKE+GK+ISRE  E +L KEK E+L
Sbjct: 395 GDPVYPTINYIQDPNAVMDFRGPDFHEPTPNMLSYLKENGKVISREMHEALLTKEKTEQL 454

Query: 462 EVTDMDDAMAQAIDIGENDDGEDSEVEVDEDAEEKINRNWSVLKSSPHLNKSKGKPKKED 518
           EV DMDDAMAQA+DIGENDD ED + +V++D +EK+ RNWSVLK +P L  +K KPKKE 
Sbjct: 455 EVPDMDDAMAQAVDIGENDDDED-DADVEKD-DEKVPRNWSVLKETPELRTAKPKPKKEG 514

The following BLAST results are available for this feature:

BLAST of Sed0012577 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883750.1	9.8e-267	88.70	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Benincasa hispida]	[more]
KAG7026443.1	2.0e-264	88.51	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 [Cucurbita argyrosperma subsp. argyr...	[more]
KAG6594437.1	2.0e-264	88.51	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic, partial [Cucurbita a...	[more]
XP_022926613.1	7.8e-264	88.32	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Cucurbita moschata]	[more]
XP_008439585.1	1.3e-263	87.27	PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 [Cucumis melo]	[more]

BLAST of Sed0012577 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IHY7	7.0e-175	64.95	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Arabidopsis thalia...	[more]
B4FZ81	3.4e-145	55.69	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Zea mays OX=4577 G...	[more]
Q0JIZ1	7.1e-143	56.19	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Oryza sativa subsp...	[more]

BLAST of Sed0012577 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIK5	3.8e-264	88.32	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Cucurbita moschata...	[more]
A0A1S3AZS1	6.4e-264	87.27	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A5D3CSY1	8.4e-264	87.27	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 OS=Cucumis melo var. maku...	[more]
A0A6J1KRU0	1.4e-263	87.95	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Cucurbita maxima O...	[more]
A0A0A0KM32	5.4e-263	86.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524690 PE=4 SV=1	[more]

BLAST of Sed0012577 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34640.1	5.0e-176	64.95	plastid transcriptionally active 12	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 448..504
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 448..462
IPR034581	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12	PANTHER	PTHR35720	PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 12, CHLOROPLASTIC	coord: 1..518

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012577.1	Sed0012577.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042793	plastid transcription
biological_process	GO:0090228	positive regulation of red or far-red light signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009637	response to blue light
biological_process	GO:0010218	response to far red light
biological_process	GO:0010114	response to red light
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex