Sed0012469 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAAGAAAACCAACACAGTGGTGACATTGATGGGGATTTTTTCATGGACAATCATTTTGGCAACCTTAGTTCCACGCTCGATGGCAGCCGACGATTACAATTCACCTATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCCTTCGACCATGTCTGGATATGGTGAAGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATATAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTCTTCGTCAAATTCATGGGAAAAAGTTGCGCCGAAGCTTTTACTTTTTCGTTTGACTTTCCGGATTTGGAAGTCTTGAAACCTAATCCCATGATGGCATATAAAACTTGTGTTAGAAGACTTGATGCTCCCCCACCTTCGAAATTTTAA ATGACAAAGAAAACCAACACAGTGGTGACATTGATGGGGATTTTTTCATGGACAATCATTTTGGCAACCTTAGTTCCACGCTCGATGGCAGCCGACGATTACAATTCACCTATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCCTTCGACCATGTCTGGATATGGTGAAGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATATAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTCTTCGTCAAATTCATGGGAAAAAGTTGCGCCGAAGCTTTTACTTTTTCGTTTGACTTTCCGGATTTGGAAGTCTTGAAACCTAATCCCATGATGGCATATAAAACTTGTGTTAGAAGACTTGATGCTCCCCCACCTTCGAAATTTTAA ATGACAAAGAAAACCAACACAGTGGTGACATTGATGGGGATTTTTTCATGGACAATCATTTTGGCAACCTTAGTTCCACGCTCGATGGCAGCCGACGATTACAATTCACCTATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCCTTCGACCATGTCTGGATATGGTGAAGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATATAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTCTTCGTCAAATTCATGGGAAAAAGTTGCGCCGAAGCTTTTACTTTTTCGTTTGACTTTCCGGATTTGGAAGTCTTGAAACCTAATCCCATGATGGCATATAAAACTTGTGTTAGAAGACTTGATGCTCCCCCACCTTCGAAATTTTAA MTKKTNTVVTLMGIFSWTIILATLVPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFSFDFPDLEVLKPNPMMAYKTCVRRLDAPPPSKF Homology
BLAST of Sed0012469 vs. NCBI nr
Match: KAA0046835.1 (hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa] >KAA0046840.1 hypothetical protein E6C27_scaffold216G001400 [Cucumis melo var. makuwa] >KAA0065932.1 hypothetical protein E6C27_scaffold10942G00010 [Cucumis melo var. makuwa] >TYK04499.1 hypothetical protein E5676_scaffold409G001130 [Cucumis melo var. makuwa] >TYK14838.1 hypothetical protein E5676_scaffold6575G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 188.0 bits (476), Expect = 5.4e-44 Identity = 83/120 (69.17%), Postives = 96/120 (80.00%), Query Frame = 0
BLAST of Sed0012469 vs. NCBI nr
Match: KAA0046841.1 (hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa] >TYK04493.1 hypothetical protein E5676_scaffold409G001070 [Cucumis melo var. makuwa]) HSP 1 Score: 177.6 bits (449), Expect = 7.3e-41 Identity = 87/135 (64.44%), Postives = 98/135 (72.59%), Query Frame = 0
BLAST of Sed0012469 vs. NCBI nr
Match: KAG6578867.1 (hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 174.1 bits (440), Expect = 8.1e-40 Identity = 84/122 (68.85%), Postives = 90/122 (73.77%), Query Frame = 0
BLAST of Sed0012469 vs. NCBI nr
Match: KAE8646662.1 (hypothetical protein Csa_004797, partial [Cucumis sativus]) HSP 1 Score: 154.1 bits (388), Expect = 8.7e-34 Identity = 72/112 (64.29%), Postives = 87/112 (77.68%), Query Frame = 0
BLAST of Sed0012469 vs. NCBI nr
Match: KAG6575251.1 (hypothetical protein SDJN03_25890, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 151.0 bits (380), Expect = 7.3e-33 Identity = 71/129 (55.04%), Postives = 90/129 (69.77%), Query Frame = 0
BLAST of Sed0012469 vs. ExPASy TrEMBL
Match: A0A5D3C280 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001130 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.6e-44 Identity = 83/120 (69.17%), Postives = 96/120 (80.00%), Query Frame = 0
BLAST of Sed0012469 vs. ExPASy TrEMBL
Match: A0A5A7TZR1 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001070 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 3.5e-41 Identity = 87/135 (64.44%), Postives = 98/135 (72.59%), Query Frame = 0
BLAST of Sed0012469 vs. ExPASy TrEMBL
Match: A0A0A0KEB8 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G054340 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 6.0e-41 Identity = 82/131 (62.60%), Postives = 97/131 (74.05%), Query Frame = 0
BLAST of Sed0012469 vs. ExPASy TrEMBL
Match: A0A0A0KQ41 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G381840 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 8.7e-32 Identity = 68/131 (51.91%), Postives = 85/131 (64.89%), Query Frame = 0
BLAST of Sed0012469 vs. ExPASy TrEMBL
Match: A0A0A0L535 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008300 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 5.1e-24 Identity = 58/133 (43.61%), Postives = 83/133 (62.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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