Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGCCGAAGACCTTAAAAATCGATCAAAACCAAACCAGTTCAGAAATGGCCGCCATTGTTACGCGCAGGTTAAGCTCCAAATTTCTCAAACCTTTTCCTTCTTCCACCTTCTTCAAAGATCCATTTCCCCAAATCTCACCCCCAAATTCCAATCCCCCATTTCTCCAATCCCTCACAAACCCTAATTTCCCCCTCTTCCATTCCCCCACACCCTTCCCACGATCCACGAATTCGAGTCTCAATCTGATTCAAAGATCGCGAAACCCTAGCTTCTTGACCCCGGATTTCAATCAGAAGCCTGGGTTTTCTTCGAATCATGGCGGCGAGTTCAAGCACCAAGAGATCGAAGGGCCGACGGTCGAGAGAGATCTCTCGGCGTTGGCCGGCGAAACCAGGGAGGTGATTGACGCGATGATGAAGAATGTGTATAGATTAAGCACAGCGCTGGCGGTTCTTGGCCTGGTTCAGCTTGGAATTGGGGCTTGGATTTCGTATTCGGTTTCGGATGCGGCCGCGGTTTCGATCCAGAGCGTCGCGGCTTTCGGGCTGCCGTTCTCGGTCGCTTTTACTCTGCGGCAGTGCTTGAAGCCGATGGTGTTCTTCAGGAAAATGGAGAAGGAAGGTCGGTTGCAGATTCTTACTCTTACTCTTCAGATTGCTAAGAATTTGAATGTTTTGTTTGTTAGGTTTCGGATTGTTTGTTTCTTGTGTGTTGCTGGATTGTCTGTTGGTGGTTTGTTTGCTTTGATTTCTAGATGAATTCATTGTTGTGGAGTTTTTTGGATTTGGGATTTGCTTGGAATAGATTTCTGATTTTGTTTTGTTGTTTAGTTTTTCTGTTCTTCTCTGCTTCATTGATATTGTTTAATTACTAGTGGGTGTGATAAAAGGCATTTGGTGAGTGGGTATGATTCTCCCTTTTGAGTGCTAGAGGTC
mRNA sequence
CTTGCCGAAGACCTTAAAAATCGATCAAAACCAAACCAGTTCAGAAATGGCCGCCATTGTTACGCGCAGGTTAAGCTCCAAATTTCTCAAACCTTTTCCTTCTTCCACCTTCTTCAAAGATCCATTTCCCCAAATCTCACCCCCAAATTCCAATCCCCCATTTCTCCAATCCCTCACAAACCCTAATTTCCCCCTCTTCCATTCCCCCACACCCTTCCCACGATCCACGAATTCGAGTCTCAATCTGATTCAAAGATCGCGAAACCCTAGCTTCTTGACCCCGGATTTCAATCAGAAGCCTGGGTTTTCTTCGAATCATGGCGGCGAGTTCAAGCACCAAGAGATCGAAGGGCCGACGGTCGAGAGAGATCTCTCGGCGTTGGCCGGCGAAACCAGGGAGGTGATTGACGCGATGATGAAGAATGTGTATAGATTAAGCACAGCGCTGGCGGTTCTTGGCCTGGTTCAGCTTGGAATTGGGGCTTGGATTTCGTATTCGGTTTCGGATGCGGCCGCGGTTTCGATCCAGAGCGTCGCGGCTTTCGGGCTGCCGTTCTCGGTCGCTTTTACTCTGCGGCAGTGCTTGAAGCCGATGGTGTTCTTCAGGAAAATGGAGAAGGAAGGTCGGTTGCAGATTCTTACTCTTACTCTTCAGATTGCTAAGAATTTGAATGTTTTGTTTGTTAGGTTTCGGATTGTTTGTTTCTTGTGTGTTGCTGGATTGTCTGTTGGTGGTTTGTTTGCTTTGATTTCTAGATGAATTCATTGTTGTGGAGTTTTTTGGATTTGGGATTTGCTTGGAATAGATTTCTGATTTTGTTTTGTTGTTTAGTTTTTCTGTTCTTCTCTGCTTCATTGATATTGTTTAATTACTAGTGGGTGTGATAAAAGGCATTTGGTGAGTGGGTATGATTCTCCCTTTTGAGTGCTAGAGGTC
Coding sequence (CDS)
ATGGCCGCCATTGTTACGCGCAGGTTAAGCTCCAAATTTCTCAAACCTTTTCCTTCTTCCACCTTCTTCAAAGATCCATTTCCCCAAATCTCACCCCCAAATTCCAATCCCCCATTTCTCCAATCCCTCACAAACCCTAATTTCCCCCTCTTCCATTCCCCCACACCCTTCCCACGATCCACGAATTCGAGTCTCAATCTGATTCAAAGATCGCGAAACCCTAGCTTCTTGACCCCGGATTTCAATCAGAAGCCTGGGTTTTCTTCGAATCATGGCGGCGAGTTCAAGCACCAAGAGATCGAAGGGCCGACGGTCGAGAGAGATCTCTCGGCGTTGGCCGGCGAAACCAGGGAGGTGATTGACGCGATGATGAAGAATGTGTATAGATTAAGCACAGCGCTGGCGGTTCTTGGCCTGGTTCAGCTTGGAATTGGGGCTTGGATTTCGTATTCGGTTTCGGATGCGGCCGCGGTTTCGATCCAGAGCGTCGCGGCTTTCGGGCTGCCGTTCTCGGTCGCTTTTACTCTGCGGCAGTGCTTGAAGCCGATGGTGTTCTTCAGGAAAATGGAGAAGGAAGGTCGGTTGCAGATTCTTACTCTTACTCTTCAGATTGCTAAGAATTTGAATGTTTTGTTTGTTAGGTTTCGGATTGTTTGTTTCTTGTGTGTTGCTGGATTGTCTGTTGGTGGTTTGTTTGCTTTGATTTCTAGATGA
Protein sequence
MAAIVTRRLSSKFLKPFPSSTFFKDPFPQISPPNSNPPFLQSLTNPNFPLFHSPTPFPRSTNSSLNLIQRSRNPSFLTPDFNQKPGFSSNHGGEFKHQEIEGPTVERDLSALAGETREVIDAMMKNVYRLSTALAVLGLVQLGIGAWISYSVSDAAAVSIQSVAAFGLPFSVAFTLRQCLKPMVFFRKMEKEGRLQILTLTLQIAKNLNVLFVRFRIVCFLCVAGLSVGGLFALISR
Homology
BLAST of Sed0012425 vs. NCBI nr
Match:
XP_022954073.1 (uncharacterized protein LOC111456447 [Cucurbita moschata])
HSP 1 Score: 260.4 bits (664), Expect = 1.5e-65
Identity = 167/281 (59.43%), Postives = 188/281 (66.90%), Query Frame = 0
Query: 1 MAAIVTRRLSSKFLKPFPSSTFF-----KDPFPQISPPNSNPPFLQS----LTNPNFPLF 60
MAAIVTRRLSSKFL+P PSSTF ++ F +I +S+P F QS P L
Sbjct: 1 MAAIVTRRLSSKFLRPIPSSTFLISQNPREHFTRIPSTHSDPSFPQSPRRTFAIPTVDLI 60
Query: 61 HSPTPFP---------RSTN-----------------SSLNLIQRSRNPSFLTPDFNQKP 120
+S TPF RS N SS LI R RNPSF D +QK
Sbjct: 61 NSHTPFADLEALRSYRRSANFNLSNPNPDHRIRGPITSSPGLIPRLRNPSFFISDLDQKY 120
Query: 121 GFSSNHGGE-------FKHQEIEGPTVERDLSALAGETREVIDAMMKNVYRLSTALAVLG 180
GFSS E FKHQ+IEGPTVERDLSALAGETREV++AMMKNVY LS A+A+LG
Sbjct: 121 GFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKAMAILG 180
Query: 181 LVQLGIGAWISYS--VSDAAAVSIQSVAAFGLPFSVAFTLRQCLKPMVFFRKMEKEGRLQ 238
LVQLGIGAWISY+ S VSIQS +FG PFS+AF LRQ LKPM+FF+KME++GRLQ
Sbjct: 181 LVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEEQGRLQ 240
BLAST of Sed0012425 vs. NCBI nr
Match:
XP_023549384.1 (uncharacterized protein LOC111807746 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 257.7 bits (657), Expect = 9.9e-65
Identity = 167/285 (58.60%), Postives = 187/285 (65.61%), Query Frame = 0
Query: 1 MAAIVTRRLSSKFLKPFPSSTFF-----KDPFPQISPPNSNPPFLQS----LTNPNFPLF 60
MAAIVTRRLSSKFL+P PSSTF + F +I +S+P F QS P L
Sbjct: 1 MAAIVTRRLSSKFLRPIPSSTFLISQNPHEHFTRIPSTHSDPSFPQSPRQTFAIPTVDLI 60
Query: 61 HSPTPFP---------RSTN---------------------SSLNLIQRSRNPSFLTPDF 120
+S TPF RS N SS LI R RNPSF D
Sbjct: 61 NSHTPFADLEALRPHRRSANFNRNFINSSPNSDHRIRGPITSSPGLIPRLRNPSFFISDL 120
Query: 121 NQKPGFSSNHGGE-------FKHQEIEGPTVERDLSALAGETREVIDAMMKNVYRLSTAL 180
+QK GFSS E FKHQ+IEGPTVERDLSALAGETREV++AMMKNVY LS A+
Sbjct: 121 DQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKAM 180
Query: 181 AVLGLVQLGIGAWISYS--VSDAAAVSIQSVAAFGLPFSVAFTLRQCLKPMVFFRKMEKE 238
A+LGLVQLGIGAWISY+ S VSIQS +FG PFS+AF LRQ LKPM+FF+KME++
Sbjct: 181 AILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEEQ 240
BLAST of Sed0012425 vs. NCBI nr
Match:
XP_022991920.1 (uncharacterized protein LOC111488415 [Cucurbita maxima])
HSP 1 Score: 255.4 bits (651), Expect = 4.9e-64
Identity = 166/286 (58.04%), Postives = 188/286 (65.73%), Query Frame = 0
Query: 1 MAAIVTRRLSSKFLKPFPSSTFF-----KDPFPQISPPNSNPPFLQS----LTNPNFPLF 60
MAAIVTRRLSSK+L+PFPSST + F +I +S+P F QS P L
Sbjct: 1 MAAIVTRRLSSKYLRPFPSSTSLISQNPHEHFARIPSTHSDPSFPQSPRRTFAIPIVDLI 60
Query: 61 HSPTPFP---------RSTNSSLN----------------------LIQRSRNPSFLTPD 120
+S TPF RS N +LN LI R RNPSF D
Sbjct: 61 NSHTPFADLEALRSYRRSANFNLNSISSNPNSDHRIRGLPITSSPGLIPRLRNPSFFILD 120
Query: 121 FNQKPGFSSNHGGE-------FKHQEIEGPTVERDLSALAGETREVIDAMMKNVYRLSTA 180
+QK GFSS E FKHQ+IEGPTVERDLSALAGETREV++AMMKNVY LS A
Sbjct: 121 LDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKA 180
Query: 181 LAVLGLVQLGIGAWISYS--VSDAAAVSIQSVAAFGLPFSVAFTLRQCLKPMVFFRKMEK 238
+A+LGLVQLGIGAWISY+ S VSIQS +FG PFS+AF LRQ LKPM+FF+KME+
Sbjct: 181 MAILGLVQLGIGAWISYATRASPITEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEE 240
BLAST of Sed0012425 vs. NCBI nr
Match:
KAG6575681.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 235.7 bits (600), Expect = 4.0e-58
Identity = 158/280 (56.43%), Postives = 177/280 (63.21%), Query Frame = 0
Query: 1 MAAIVTRRLSSKFLKPFPSSTFF-----KDPFPQISPPNSNPPFLQS----LTNPNFPLF 60
MAAIVTRRLSSKFL+P PSSTF ++ F +I +S+P F QS P L
Sbjct: 1 MAAIVTRRLSSKFLRPIPSSTFLISQGPREHFTRIPSTHSDPWFPQSPRRTFAIPTVDLV 60
Query: 61 HSPTPFP-----------RSTN---------------------SSLNLIQRSRNPSFLTP 120
SPT P RS N SS LI R RNPSF
Sbjct: 61 -SPTDTPFADLEALRSYRRSANFNRNSISSNPNSDHRIRGPITSSPGLIPRLRNPSFFIS 120
Query: 121 DFNQKPGFSSNHGGE-------FKHQEIEGPTVERDLSALAGETREVIDAMMKNVYRLST 180
D +QK GFSS E FKHQ+IEGPTVERDLSALAGETREV++AMMKNVY LS
Sbjct: 121 DLDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSK 180
Query: 181 ALAVLGLVQLGIGAWISYS--VSDAAAVSIQSVAAFGLPFSVAFTLRQCLKPMVFFRKME 231
A+A+LGLVQLGIGAWISY+ S VSIQS +FG PFS+AF LRQ LKPM+FF+KME
Sbjct: 181 AMAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKME 240
BLAST of Sed0012425 vs. NCBI nr
Match:
XP_004135922.1 (uncharacterized protein LOC101204591 [Cucumis sativus] >KGN45144.1 hypothetical protein Csa_015548 [Cucumis sativus])
HSP 1 Score: 235.0 bits (598), Expect = 6.9e-58
Identity = 155/270 (57.41%), Postives = 180/270 (66.67%), Query Frame = 0
Query: 1 MAAIVTRRLSSKFLKPFPSSTFF-----KDPFPQISPPNSNPPFLQS--LTNPN--FPLF 60
MAAIVTRRLSS +PF STF +P + P+S+P FL S T+PN LF
Sbjct: 1 MAAIVTRRLSSNIFRPFLPSTFLISQIPHEPLTRFHSPHSDPSFLGSSRRTSPNTTVDLF 60
Query: 61 HSPTP--------------FPRSTNSSLNLIQRSRNPSFLT-PDFNQKPGFSSNHGGE-- 120
+S + F S I + RNPSF++ DF++K FS+ E
Sbjct: 61 NSISKSITHDLLVQNKTLNFNDPIGSGSYSIMKLRNPSFVSISDFDRKSRFSTTSEKENE 120
Query: 121 -----FKHQEIEGPTVERDLSALAGETREVIDAMMKNVYRLSTALAVLGLVQLGIGAWIS 180
FKHQ+IEGPTVERDLSALA ETR+VI+AMMKNVYRLS A+AVLGLVQLGIGAWIS
Sbjct: 121 QKPDDFKHQDIEGPTVERDLSALANETRDVIEAMMKNVYRLSKAMAVLGLVQLGIGAWIS 180
Query: 181 YSV--SDAAAVSIQSVAAFGLPFSVAFTLRQCLKPMVFFRKMEKEGRLQILTLTLQIAKN 238
Y S VSIQS AFG PFS+AF LRQ LKPM+FF+KME++GRLQILTL+LQI KN
Sbjct: 181 YITRGSPITEVSIQSFVAFGFPFSMAFILRQSLKPMMFFKKMEEQGRLQILTLSLQIGKN 240
BLAST of Sed0012425 vs. ExPASy TrEMBL
Match:
A0A6J1GQ34 (uncharacterized protein LOC111456447 OS=Cucurbita moschata OX=3662 GN=LOC111456447 PE=4 SV=1)
HSP 1 Score: 260.4 bits (664), Expect = 7.4e-66
Identity = 167/281 (59.43%), Postives = 188/281 (66.90%), Query Frame = 0
Query: 1 MAAIVTRRLSSKFLKPFPSSTFF-----KDPFPQISPPNSNPPFLQS----LTNPNFPLF 60
MAAIVTRRLSSKFL+P PSSTF ++ F +I +S+P F QS P L
Sbjct: 1 MAAIVTRRLSSKFLRPIPSSTFLISQNPREHFTRIPSTHSDPSFPQSPRRTFAIPTVDLI 60
Query: 61 HSPTPFP---------RSTN-----------------SSLNLIQRSRNPSFLTPDFNQKP 120
+S TPF RS N SS LI R RNPSF D +QK
Sbjct: 61 NSHTPFADLEALRSYRRSANFNLSNPNPDHRIRGPITSSPGLIPRLRNPSFFISDLDQKY 120
Query: 121 GFSSNHGGE-------FKHQEIEGPTVERDLSALAGETREVIDAMMKNVYRLSTALAVLG 180
GFSS E FKHQ+IEGPTVERDLSALAGETREV++AMMKNVY LS A+A+LG
Sbjct: 121 GFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKAMAILG 180
Query: 181 LVQLGIGAWISYS--VSDAAAVSIQSVAAFGLPFSVAFTLRQCLKPMVFFRKMEKEGRLQ 238
LVQLGIGAWISY+ S VSIQS +FG PFS+AF LRQ LKPM+FF+KME++GRLQ
Sbjct: 181 LVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEEQGRLQ 240
BLAST of Sed0012425 vs. ExPASy TrEMBL
Match:
A0A6J1JU98 (uncharacterized protein LOC111488415 OS=Cucurbita maxima OX=3661 GN=LOC111488415 PE=4 SV=1)
HSP 1 Score: 255.4 bits (651), Expect = 2.4e-64
Identity = 166/286 (58.04%), Postives = 188/286 (65.73%), Query Frame = 0
Query: 1 MAAIVTRRLSSKFLKPFPSSTFF-----KDPFPQISPPNSNPPFLQS----LTNPNFPLF 60
MAAIVTRRLSSK+L+PFPSST + F +I +S+P F QS P L
Sbjct: 1 MAAIVTRRLSSKYLRPFPSSTSLISQNPHEHFARIPSTHSDPSFPQSPRRTFAIPIVDLI 60
Query: 61 HSPTPFP---------RSTNSSLN----------------------LIQRSRNPSFLTPD 120
+S TPF RS N +LN LI R RNPSF D
Sbjct: 61 NSHTPFADLEALRSYRRSANFNLNSISSNPNSDHRIRGLPITSSPGLIPRLRNPSFFILD 120
Query: 121 FNQKPGFSSNHGGE-------FKHQEIEGPTVERDLSALAGETREVIDAMMKNVYRLSTA 180
+QK GFSS E FKHQ+IEGPTVERDLSALAGETREV++AMMKNVY LS A
Sbjct: 121 LDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKA 180
Query: 181 LAVLGLVQLGIGAWISYS--VSDAAAVSIQSVAAFGLPFSVAFTLRQCLKPMVFFRKMEK 238
+A+LGLVQLGIGAWISY+ S VSIQS +FG PFS+AF LRQ LKPM+FF+KME+
Sbjct: 181 MAILGLVQLGIGAWISYATRASPITEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEE 240
BLAST of Sed0012425 vs. ExPASy TrEMBL
Match:
A0A0A0K8D3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428810 PE=4 SV=1)
HSP 1 Score: 235.0 bits (598), Expect = 3.3e-58
Identity = 155/270 (57.41%), Postives = 180/270 (66.67%), Query Frame = 0
Query: 1 MAAIVTRRLSSKFLKPFPSSTFF-----KDPFPQISPPNSNPPFLQS--LTNPN--FPLF 60
MAAIVTRRLSS +PF STF +P + P+S+P FL S T+PN LF
Sbjct: 1 MAAIVTRRLSSNIFRPFLPSTFLISQIPHEPLTRFHSPHSDPSFLGSSRRTSPNTTVDLF 60
Query: 61 HSPTP--------------FPRSTNSSLNLIQRSRNPSFLT-PDFNQKPGFSSNHGGE-- 120
+S + F S I + RNPSF++ DF++K FS+ E
Sbjct: 61 NSISKSITHDLLVQNKTLNFNDPIGSGSYSIMKLRNPSFVSISDFDRKSRFSTTSEKENE 120
Query: 121 -----FKHQEIEGPTVERDLSALAGETREVIDAMMKNVYRLSTALAVLGLVQLGIGAWIS 180
FKHQ+IEGPTVERDLSALA ETR+VI+AMMKNVYRLS A+AVLGLVQLGIGAWIS
Sbjct: 121 QKPDDFKHQDIEGPTVERDLSALANETRDVIEAMMKNVYRLSKAMAVLGLVQLGIGAWIS 180
Query: 181 YSV--SDAAAVSIQSVAAFGLPFSVAFTLRQCLKPMVFFRKMEKEGRLQILTLTLQIAKN 238
Y S VSIQS AFG PFS+AF LRQ LKPM+FF+KME++GRLQILTL+LQI KN
Sbjct: 181 YITRGSPITEVSIQSFVAFGFPFSMAFILRQSLKPMMFFKKMEEQGRLQILTLSLQIGKN 240
BLAST of Sed0012425 vs. ExPASy TrEMBL
Match:
A0A5A7UUD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00960 PE=4 SV=1)
HSP 1 Score: 233.4 bits (594), Expect = 9.7e-58
Identity = 154/271 (56.83%), Postives = 182/271 (67.16%), Query Frame = 0
Query: 1 MAAIVTRRLSSKFLKPFPSSTFF-----KDPFPQISPPNSNPPFLQS--LTNPN---FPL 60
MAAIVTRRLSS +PF STF PF +I P+S+P FL+S T+PN L
Sbjct: 1 MAAIVTRRLSSNLFRPFLPSTFLISQNPHKPFTRIPSPHSDPSFLRSPRRTSPNTTTLDL 60
Query: 61 FH----SPTPFPRSTNSSLNL----------IQRSRNPSFL-TPDFNQKPGFSSNHGGE- 120
F+ S TP ++ N S I + NP+F+ DF++K FS+ E
Sbjct: 61 FNSISKSITPDLQTQNKSPKFNWPIGSVSYSIMKLTNPNFVFVSDFDRKSRFSTTPEKES 120
Query: 121 ------FKHQEIEGPTVERDLSALAGETREVIDAMMKNVYRLSTALAVLGLVQLGIGAWI 180
FKHQ+IEGPTVERDLSALA ETR+V++AMMKNVYRLS A+AVLGLVQLG+GAWI
Sbjct: 121 EQKQDDFKHQDIEGPTVERDLSALANETRDVVEAMMKNVYRLSKAMAVLGLVQLGVGAWI 180
Query: 181 SYSV--SDAAAVSIQSVAAFGLPFSVAFTLRQCLKPMVFFRKMEKEGRLQILTLTLQIAK 238
SY S VSIQS AFG PFS+AF LRQ LKPM+FF+KME++GRLQILTL+LQI K
Sbjct: 181 SYITRGSPITEVSIQSFVAFGFPFSLAFILRQSLKPMMFFKKMEEQGRLQILTLSLQIGK 240
BLAST of Sed0012425 vs. ExPASy TrEMBL
Match:
A0A1S3CFJ7 (uncharacterized protein LOC103499911 OS=Cucumis melo OX=3656 GN=LOC103499911 PE=4 SV=1)
HSP 1 Score: 233.4 bits (594), Expect = 9.7e-58
Identity = 154/271 (56.83%), Postives = 182/271 (67.16%), Query Frame = 0
Query: 1 MAAIVTRRLSSKFLKPFPSSTFF-----KDPFPQISPPNSNPPFLQS--LTNPN---FPL 60
MAAIVTRRLSS +PF STF PF +I P+S+P FL+S T+PN L
Sbjct: 1 MAAIVTRRLSSNLFRPFLPSTFLISQNPHKPFTRIPSPHSDPSFLRSPRRTSPNTTTLDL 60
Query: 61 FH----SPTPFPRSTNSSLNL----------IQRSRNPSFL-TPDFNQKPGFSSNHGGE- 120
F+ S TP ++ N S I + NP+F+ DF++K FS+ E
Sbjct: 61 FNSISKSITPDLQTQNKSPKFNWPIGSVSYSIMKLTNPNFVFVSDFDRKSRFSTTPEKES 120
Query: 121 ------FKHQEIEGPTVERDLSALAGETREVIDAMMKNVYRLSTALAVLGLVQLGIGAWI 180
FKHQ+IEGPTVERDLSALA ETR+V++AMMKNVYRLS A+AVLGLVQLG+GAWI
Sbjct: 121 EQKQDDFKHQDIEGPTVERDLSALANETRDVVEAMMKNVYRLSKAMAVLGLVQLGVGAWI 180
Query: 181 SYSV--SDAAAVSIQSVAAFGLPFSVAFTLRQCLKPMVFFRKMEKEGRLQILTLTLQIAK 238
SY S VSIQS AFG PFS+AF LRQ LKPM+FF+KME++GRLQILTL+LQI K
Sbjct: 181 SYITRGSPITEVSIQSFVAFGFPFSLAFILRQSLKPMMFFKKMEEQGRLQILTLSLQIGK 240
BLAST of Sed0012425 vs. TAIR 10
Match:
AT3G12650.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 156.4 bits (394), Expect = 2.9e-38
Identity = 111/240 (46.25%), Postives = 137/240 (57.08%), Query Frame = 0
Query: 4 IVTRRLSSKFLKPFPSSTF-FKDPFPQISPPNSNPPFLQSLTNPNFPLFHSPTPFPRSTN 63
+++RRL SKFLKP S +F Q S + L S + F
Sbjct: 2 MISRRLVSKFLKPLSSPSFHVSRRHLQSSSSLIRNHLIHGSVTKELGLLRSFSVFNIDKL 61
Query: 64 SSLNLIQRSRNPSFLTPDFNQKPGFSSNHGGE----FKHQEIEGPTVERDLSALAGETRE 123
S R F TP +P E KHQEIEGPTVERDLSAL ETR+
Sbjct: 62 RSETWSPR----YFSTPSGETEPKKPEESKEEELQKMKHQEIEGPTVERDLSALGNETRQ 121
Query: 124 VIDAMMKNVYRLSTALAVLGLVQLGIGAWISYS--VSDAAAVSIQSVAAFGLPFSVAFTL 183
V++ MMKN+Y LS A+ LGL QL +GA I Y+ ++IQS AFG PF++A +
Sbjct: 122 VLEGMMKNMYSLSGAMGALGLTQLILGAAILYATRADPMKEMTIQSCIAFGFPFAMALMV 181
Query: 184 RQCLKPMVFFRKMEKEGRLQILTLTLQIAKNLNVLFVRFRIVCFLCVAGLSVGGLFALIS 237
R+ LKPM FF+KME+ GRLQILTLTLQ+AKNLN+LFVR R+V LCV L G LF L+S
Sbjct: 182 RRSLKPMYFFKKMEELGRLQILTLTLQVAKNLNLLFVRARVVSILCVVALCFGNLFLLLS 237
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022954073.1 | 1.5e-65 | 59.43 | uncharacterized protein LOC111456447 [Cucurbita moschata] | [more] |
| XP_023549384.1 | 9.9e-65 | 58.60 | uncharacterized protein LOC111807746 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022991920.1 | 4.9e-64 | 58.04 | uncharacterized protein LOC111488415 [Cucurbita maxima] | [more] |
| KAG6575681.1 | 4.0e-58 | 56.43 | Zinc finger A20 and AN1 domain-containing stress-associated protein 8, partial [... | [more] |
| XP_004135922.1 | 6.9e-58 | 57.41 | uncharacterized protein LOC101204591 [Cucumis sativus] >KGN45144.1 hypothetical ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1GQ34 | 7.4e-66 | 59.43 | uncharacterized protein LOC111456447 OS=Cucurbita moschata OX=3662 GN=LOC1114564... | [more] |
| A0A6J1JU98 | 2.4e-64 | 58.04 | uncharacterized protein LOC111488415 OS=Cucurbita maxima OX=3661 GN=LOC111488415... | [more] |
| A0A0A0K8D3 | 3.3e-58 | 57.41 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428810 PE=4 SV=1 | [more] |
| A0A5A7UUD1 | 9.7e-58 | 56.83 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3CFJ7 | 9.7e-58 | 56.83 | uncharacterized protein LOC103499911 OS=Cucumis melo OX=3656 GN=LOC103499911 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G12650.1 | 2.9e-38 | 46.25 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
