Sed0012365 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTAGTTTTACTGTTGTAACTTAAATATTCAAGTGTATTCCTTCTATAAATACACTCTTGGGATCATTAATAAAATTCATTTTATTCTTCCCAATATTTCTCTATTTCAAAATGGTATCGGATGATTTTTTTCTCTCTCTTTTAAACGCGTTTTTTTCTTTTCCCATATTAGATGTCAAATTTTCTTGCGTTTTTTTCCATCTCTTCTTCTTCTTCTCCAAAATTAGGGTTCAGCTTCTTCAATCGATCCTCCATGGGCACCACCGAATTTGCTCCGCTTCAACCTGAATCTGCTCCCTCTCTGGTTGGCAGATCTTCCACCGTCTCTGATTCGTCCATTTATGATTTTTTACAGAGTCCATACTCATTCATGTCTCATGATACTTCAAACCTTGTTTTAGTCTCAGATCTACTCAATGAGGACAATTACCTCACTTGGAGTCGCTCAATGCGTCTGGGTTTATCGATCAGAAACAAGCTTGGTTTCGTTGATGGATCGATTAAAAAACTCACAGGTCCTCTGCTCCAATCTTGGATTCGAAGTAACAACATAGTCATCGCCTAGATTCTCAACTCGGTTTCGAAGGAAATTTCTTCGAGCATTCTATTCTCTAAAAATGCTCATGCTATTTGGCTAGATCTAAAAGATCGATTTCAACGCAGACATGGACCTCGCATATATCAATTGAAGAGTGATCCTGCCGTTCTCACTCAAGGTCAGCAGTCTGTATCGTTTTATTTCTCCAAACTCAAGACCATTTGGGATGAATTAGATACGTATCGCCTGAATTTTTCTTGTAATCTCTGTTCGTTTGGAGGAACTAAAGCCATCACCGATTTCTTTCAAAATGAATACCTTATGAGTTTCCTAATAGGGTTAAACGATACATTCGGATCGGCCAGATCTCAAATCCTATTAATGGATCCTATGCGATCGGTGAGTAAGGCATTCACCCTCATAGTTCAAGAAGAGCATCAACACTCAATGCCTCTTCTTCCCACACCTCCTTCATCTCTGATGCTTTCCGTTTCTCAAACTTCAAACTCTATGAAGTCACAGAACTCTACCACTGTCGGGTCTTCACAATCCACTCGATCACGCATAGATTGTTCAGTATGCACTCACTGTGGATTCGTTGGGCACACCATAGATCGTTGTTATAAAATCCATGGTTGCCCCCCTGGGTTCAAGTCCAAGAATGCACGGGATGTGACTTCTACATGGCATTCCTCGGCTGCTCCTTCAAATGTGGCATTAGCCACAACACCCTCACGTTAAGATATTCGAGACTCTACAATTGCACAGTGCCAAAATATTCTTTCTATGTTGCAGACGACTCTTGCCACAACACAATCTTCATCTAAGTCTTCTCGTATCATGTTGCATGTATGGTTCTTTCTACTCCTAATAATATACATACCCTCGATTGGTTTATTGACTCAGGCGCATCCACACACATCTACTATGATATATCTGCTTTTTCGGAATTACATAAGATTCATACCTCTATTGTATTACCTGATAGTACACGCATCAAGTTGAATTTGCTGGCATAGTTGTTTTGTTTGGCATTCTCACTCTTCACAATGTTTTATTTGTACCCCAGTTTAAATACAACTTGGTGTCTGTCAGTGCTCTTACTTCTAATAAACAAATTCTTGTGAATTTTTGTGATGGATTATGCCCTATTCAGGACAAGTGCACTATGAAGATGATTGGCAGGGGTAGCTTACATGATGGCTTGTATGTACTGCACAACACTCATTCTGAAATTGTGGCATCAGTAAAGACAGTTTCTGCAACAACATGGCACGAGAGGCTTGGTCACCCTTCTTTTTCTCGATTAAATGTACTTAAGGATAGTCTTTGTTTTGATTCTTGTAAGTCTCTACATGATATACCATGTGAGATATGTCCTTTTTCAAAACAAAAGAAGCTATCATACGAATGCAATAACAATTTGTCTTTGAATATCTTTGGTCTTATTCATGCTGACACTTGAGGCCTTTTTTCGGTTGCCTCTACTAACAGA GTTAGTTTTACTGTTGTAACTTAAATATTCAAGTGTATTCCTTCTATAAATACACTCTTGGGATCATTAATAAAATTCATTTTATTCTTCCCAATATTTCTCTATTTCAAAATGGTATCGGATGATTTTTTTCTCTCTCTTTTAAACGCGTTTTTTTCTTTTCCCATATTAGATGTCAAATTTTCTTGCGTTTTTTTCCATCTCTTCTTCTTCTTCTCCAAAATTAGGGTTCAGCTTCTTCAATCGATCCTCCATGGGCACCACCGAATTTGCTCCGCTTCAACCTGAATCTGCTCCCTCTCTGGTTGGCAGATCTTCCACCGTCTCTGATTCGTCCATTTATGATTTTTTACAGAGTCCATACTCATTCATGTCTCATGATACTTCAAACCTTGTTTTAGTCTCAGATCTACTCAATGAGGACAATTACCTCACTTGGAGTCGCTCAATGCGTCTGGGTTTATCGATCAGAAACAAGCTTGGTTTCGTTGATGGATCGATTAAAAAACTCACAGGTCCTCTGCTCCAATCTTGGATTCGAAGTAACAACATAGTCATCGCCTAGATTCTCAACTCGGTTTCGAAGGAAATTTCTTCGAGCATTCTATTCTCTAAAAATGCTCATGCTATTTGGCTAGATCTAAAAGATCGATTTCAACGCAGACATGGACCTCGCATATATCAATTGAAGAGTGATCCTGCCGTTCTCACTCAAGGTCAGCAGTCTGTATCGTTTTATTTCTCCAAACTCAAGACCATTTGGGATGAATTAGATACGTATCGCCTGAATTTTTCTTGTAATCTCTGTTCGTTTGGAGGAACTAAAGCCATCACCGATTTCTTTCAAAATGAATACCTTATGAGTTTCCTAATAGGGTTAAACGATACATTCGGATCGGCCAGATCTCAAATCCTATTAATGGATCCTATGCGATCGGTGAGTAAGGCATTCACCCTCATAGTTCAAGAAGAGCATCAACACTCAATGCCTCTTCTTCCCACACCTCCTTCATCTCTGATGCTTTCCGTTTCTCAAACTTCAAACTCTATGAAGTCACAGAACTCTACCACTGTCGGGTCTTCACAATCCACTCGATCACGCATAGATTGTTCAGTATGCACTCACTGTGGATTCGTTGGGCACACCATAGATCGTTGTTATAAAATCCATGGTTGCCCCCCTGGGTTCAAGTCCAAGAATGCACGGGATGTGACTTCTACATGGCATTCCTCGGCTGCTCCTTCAAATGTGGCATTAGCCACAACACCCTCACGTTAAGATATTCGAGACTCTACAATTGCACAGTGCCAAAATATTCTTTCTATGTTGCAGACGACTCTTGCCACAACACAATCTTCATCTAAGTCTTCTCGTATCATGTTGCATGACAAGTGCACTATGAAGATGATTGGCAGGGGTAGCTTACATGATGGCTTGTATGTACTGCACAACACTCATTCTGAAATTGTGGCATCAGTAAAGACAGTTTCTGCAACAACATGGCACGAGAGGCTTGGTCACCCTTCTTTTTCTCGATTAAATGTACTTAAGGATAGTCTTTGTTTTGATTCTTGTAAGTCTCTACATGATATACCATGTGAGATATGTCCTTTTTCAAAACAAAAGAAGCTATCATACGAATGCAATAACAATTTGTCTTTGAATATCTTTGGTCTTATTCATGCTGACACTTGAGGCCTTTTTTCGGTTGCCTCTACTAACAGA ATGAGTTTCCTAATAGGGTTAAACGATACATTCGGATCGGCCAGATCTCAAATCCTATTAATGGATCCTATGCGATCGGTGAGTAAGGCATTCACCCTCATAGTTCAAGAAGAGCATCAACACTCAATGCCTCTTCTTCCCACACCTCCTTCATCTCTGATGCTTTCCGTTTCTCAAACTTCAAACTCTATGAAGTCACAGAACTCTACCACTGTCGGGTCTTCACAATCCACTCGATCACGCATAGATTGTTCAGTATGCACTCACTGTGGATTCGTTGGGCACACCATAGATCGTTGTTATAAAATCCATGGTTGCCCCCCTGGGTTCAAGTCCAAGAATGCACGGGATGTGACTTCTACATGGCATTCCTCGGCTGCTCCTTCAAATGTGGCATTAGCCACAACACCCTCACGTTAA MSFLIGLNDTFGSARSQILLMDPMRSVSKAFTLIVQEEHQHSMPLLPTPPSSLMLSVSQTSNSMKSQNSTTVGSSQSTRSRIDCSVCTHCGFVGHTIDRCYKIHGCPPGFKSKNARDVTSTWHSSAAPSNVALATTPSR Homology
BLAST of Sed0012365 vs. NCBI nr
Match: XP_022154973.1 (uncharacterized protein LOC111022117 [Momordica charantia]) HSP 1 Score: 103.2 bits (256), Expect = 1.8e-18 Identity = 59/138 (42.75%), Postives = 87/138 (63.04%), Query Frame = 0
BLAST of Sed0012365 vs. NCBI nr
Match: XP_030949946.1 (uncharacterized protein LOC115973845 [Quercus lobata]) HSP 1 Score: 103.2 bits (256), Expect = 1.8e-18 Identity = 54/114 (47.37%), Postives = 72/114 (63.16%), Query Frame = 0
BLAST of Sed0012365 vs. NCBI nr
Match: XP_034677823.1 (uncharacterized protein LOC117908333 [Vitis riparia]) HSP 1 Score: 100.9 bits (250), Expect = 9.1e-18 Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 0
BLAST of Sed0012365 vs. NCBI nr
Match: XP_042976284.1 (uncharacterized protein LOC122307457 [Carya illinoinensis]) HSP 1 Score: 100.5 bits (249), Expect = 1.2e-17 Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = 0
BLAST of Sed0012365 vs. NCBI nr
Match: XP_030970454.1 (uncharacterized protein LOC115990812 [Quercus lobata]) HSP 1 Score: 99.8 bits (247), Expect = 2.0e-17 Identity = 54/128 (42.19%), Postives = 74/128 (57.81%), Query Frame = 0
BLAST of Sed0012365 vs. ExPASy TrEMBL
Match: A0A6J1DLQ9 (uncharacterized protein LOC111022117 OS=Momordica charantia OX=3673 GN=LOC111022117 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 8.9e-19 Identity = 59/138 (42.75%), Postives = 87/138 (63.04%), Query Frame = 0
BLAST of Sed0012365 vs. ExPASy TrEMBL
Match: A0A2N9EYN0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7591 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 2.0e-18 Identity = 61/136 (44.85%), Postives = 84/136 (61.76%), Query Frame = 0
BLAST of Sed0012365 vs. ExPASy TrEMBL
Match: A0A2N9IWI8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57619 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 9.8e-18 Identity = 60/136 (44.12%), Postives = 83/136 (61.03%), Query Frame = 0
BLAST of Sed0012365 vs. ExPASy TrEMBL
Match: A0A438I180 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_2558 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.3e-17 Identity = 52/118 (44.07%), Postives = 74/118 (62.71%), Query Frame = 0
BLAST of Sed0012365 vs. ExPASy TrEMBL
Match: A0A438BW82 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3455 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.3e-17 Identity = 52/118 (44.07%), Postives = 74/118 (62.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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