Sed0012327 (gene) Chayote v1

Overview


Name	Sed0012327
Type	gene
Organism	Sechium edule (Chayote v1)
Description	60S ribosomal protein L4-like
Location	LG02: 45078594 .. 45080820 (+)
RNA-Seq Expression	Sed0012327
Synteny	Sed0012327

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAGAAACCCTAGTTTGTTCCGGCTTGCACTCAAACCGCCCAAAATGGCCGCCGCAGCCGCTCGTCCTCTGGTCGTCGTTCAATCTCTTGAAGGCGATATGGTCACCGATTCTGCTCCGTCGGTGCCATTGCCGGATGTTATGAAAGCTTGCATTCGGCCGGATATAGTCAACTTCGTCCACGCCAACATCTCCAAGAACCGCCGTCAACCCTACGCTGTAAGCAAGAAAGCCGGCCATCAAACCTCCGCCGAGTCGTGGGGAACAGGACGAGCCGTTTCTCGTATCCCCCGTGTTCCCGGCGGCGGTACTCACCGCGCCGGTCAAGCAGCTTTCGGCAACATGTGTCGCGGTGGACGCATGTTTGCTCCGACAAAGATCTGGCGCCGATGGCATCGCAAGATCAACGTGAACCAAAAGAGGTACGCTGTTGTTTCCGCCATTGCTGCTTCTGCGGTTCCTTCTTTGGTCATGGCTCGCGGCCACCGGATCGAGTCCGTTCCGGAGCTTCCTCTCGTGATTAGCGATTCAGCCGAGGGAATCGAGAAGACCTCGTCTGCAATCAAGGTTTTGAAGCAGATCGGCGCGTTTCCTGATGCGGAGAAGGCGAAGGATAGCCATGCGATTCGAGCTGGGAAGGGTAAGATGAGGAACCGTCGTTACATTTCGAGAAAAGGTCCGTTGATTGTGTATGGTACTGAAGGTGCTAAGATTGTTAAGGCTTTTCGCAACATTCCGGGTATCGATTTGGTGAATGTCGAGAGGCTGAGTCTTTTGAAGCTTGCTCCTGGTGGTCATCTTGGGAGATTTGTCATCTGGACTAAATCTGCTTTTGAGAAGCTTGATTCCATTTATGGATCGTTCGAGAAGTCGGCCGAGAAGAAGAAGGGCTATGTTCTTCCAAGGGCCAAGATGGTCAATGCTGATTTGTCCAGGATCATCAATTCTGATGAGGTTCAATCTGTCGTTAAACCCATTAAGAAATCTGTGAAGAGACCTTCCTTGAAGAAGAACCCACTCAAGAATCTCAACGCCATGTTGAAGCTGAATCCTTATGCTAAAACTGCAAAGAGAATGTCTTTGTTGGCTGAGGCACAGCGTGTGAAAGCTAAGAAGGAAAAGCTTGACAAGAAGAGGAACATTATCCCTAAGGTATCTCTTGATTATTGCTTTTATAGATTTATTACTGTTCAATTACTTTCTGCCTTGTTTCAAGTTTTAGGTGGTTTTTGTTGGTCAACTGCGAGTGCATAGTTGATTATGAAATGGGATTCAATTCGGATGTAGTTGATGATAGGTTTAATTGGGAACCGTATCTATATTCATCCATGTATTTAACTCTCACTCGATCAAAATGTTTTATTCTCAGTTTTGTTGCATGATATTATAAATTAAGATTATACAGTTGATAGAATGACACAAAGTTTTGCTTGCAACTTGGTAGATGAGAATTAGGTGATGGCATGCTTTAGTGGTCTTTTCTATTAGATATCAACTCATTTATATTATCAAATGAATCTTCTTGATTTATTCGTTGCTAATGTTTCCTTTGACATTGATGAATCGTCGATAAATTTGTGATCTATCTCTTCTTGGAACTATCTAATTGCCAATTGGCTAGTTTTCTAAGTTGACTCACTTGTTTTTATAGCTGAATGGGACCTGGTATTTTCACCGTTGCTTTGAATCAGTCGTTTTCAGCTTCATTTTGTCACATAATTGTGGCTTATACTTGTTCATGTTGAATTTAGAATCAGTTGCCACTCTTGATATTGATGTTGTGTTCATTGTGGCCATTTTATATTATCTTCAGGAGGAGGCTACTGCAGTCAGGGCAGCAGGAAAAGCATGGTACCAGACGATGATTTCAGATAGTGATTACACCGAGTTCGAAAACTTCTCGAAGTGGCTTGGCGTCTCTCAGTAATTTTGTTTACTCTTTTTGACAGTTTTCATAGACCTTAGTTTGTTGATTATATTTTGTATGCTGCTGCCTTTTTTGTTTTGGGTCATAGAGGAAAGTAGGTGGTGGGTCAATTATAATGAATGGGATCTTGTGCTTCCCCTCCTACTTCCTTGCTTCTCTTGCCTTGCTGGAAGAGTATTTATTTTTAATATGAAAATGAACATCTGAAGAGCTTAGAAAGGTCAGTTTTTTTGGTATCAGTAATTTGCACTGATGTTTACACTTTAAACCTGTGTTAAGATTTTGAATCTATTATATGCTG

mRNA sequence

ACAGAAACCCTAGTTTGTTCCGGCTTGCACTCAAACCGCCCAAAATGGCCGCCGCAGCCGCTCGTCCTCTGGTCGTCGTTCAATCTCTTGAAGGCGATATGGTCACCGATTCTGCTCCGTCGGTGCCATTGCCGGATGTTATGAAAGCTTGCATTCGGCCGGATATAGTCAACTTCGTCCACGCCAACATCTCCAAGAACCGCCGTCAACCCTACGCTGTAAGCAAGAAAGCCGGCCATCAAACCTCCGCCGAGTCGTGGGGAACAGGACGAGCCGTTTCTCGTATCCCCCGTGTTCCCGGCGGCGGTACTCACCGCGCCGGTCAAGCAGCTTTCGGCAACATGTGTCGCGGTGGACGCATGTTTGCTCCGACAAAGATCTGGCGCCGATGGCATCGCAAGATCAACGTGAACCAAAAGAGGTACGCTGTTGTTTCCGCCATTGCTGCTTCTGCGGTTCCTTCTTTGGTCATGGCTCGCGGCCACCGGATCGAGTCCGTTCCGGAGCTTCCTCTCGTGATTAGCGATTCAGCCGAGGGAATCGAGAAGACCTCGTCTGCAATCAAGGTTTTGAAGCAGATCGGCGCGTTTCCTGATGCGGAGAAGGCGAAGGATAGCCATGCGATTCGAGCTGGGAAGGGTAAGATGAGGAACCGTCGTTACATTTCGAGAAAAGGTCCGTTGATTGTGTATGGTACTGAAGGTGCTAAGATTGTTAAGGCTTTTCGCAACATTCCGGGTATCGATTTGGTGAATGTCGAGAGGCTGAGTCTTTTGAAGCTTGCTCCTGGTGGTCATCTTGGGAGATTTGTCATCTGGACTAAATCTGCTTTTGAGAAGCTTGATTCCATTTATGGATCGTTCGAGAAGTCGGCCGAGAAGAAGAAGGGCTATGTTCTTCCAAGGGCCAAGATGGTCAATGCTGATTTGTCCAGGATCATCAATTCTGATGAGGTTCAATCTGTCGTTAAACCCATTAAGAAATCTGTGAAGAGACCTTCCTTGAAGAAGAACCCACTCAAGAATCTCAACGCCATGTTGAAGCTGAATCCTTATGCTAAAACTGCAAAGAGAATGTCTTTGTTGGCTGAGGCACAGCGTGTGAAAGCTAAGAAGGAAAAGCTTGACAAGAAGAGGAACATTATCCCTAAGGAGGAGGCTACTGCAGTCAGGGCAGCAGGAAAAGCATGGTACCAGACGATGATTTCAGATAGTGATTACACCGAGTTCGAAAACTTCTCGAAGTGGCTTGGCGTCTCTCAGTAATTTTGTTTACTCTTTTTGACAGTTTTCATAGACCTTAGTTTGTTGATTATATTTTGTATGCTGCTGCCTTTTTTGTTTTGGGTCATAGAGGAAAGTAGGTGGTGGGTCAATTATAATGAATGGGATCTTGTGCTTCCCCTCCTACTTCCTTGCTTCTCTTGCCTTGCTGGAAGAGTATTTATTTTTAATATGAAAATGAACATCTGAAGAGCTTAGAAAGGTCAGTTTTTTTGGTATCAGTAATTTGCACTGATGTTTACACTTTAAACCTGTGTTAAGATTTTGAATCTATTATATGCTG

Coding sequence (CDS)

ATGGCCGCCGCAGCCGCTCGTCCTCTGGTCGTCGTTCAATCTCTTGAAGGCGATATGGTCACCGATTCTGCTCCGTCGGTGCCATTGCCGGATGTTATGAAAGCTTGCATTCGGCCGGATATAGTCAACTTCGTCCACGCCAACATCTCCAAGAACCGCCGTCAACCCTACGCTGTAAGCAAGAAAGCCGGCCATCAAACCTCCGCCGAGTCGTGGGGAACAGGACGAGCCGTTTCTCGTATCCCCCGTGTTCCCGGCGGCGGTACTCACCGCGCCGGTCAAGCAGCTTTCGGCAACATGTGTCGCGGTGGACGCATGTTTGCTCCGACAAAGATCTGGCGCCGATGGCATCGCAAGATCAACGTGAACCAAAAGAGGTACGCTGTTGTTTCCGCCATTGCTGCTTCTGCGGTTCCTTCTTTGGTCATGGCTCGCGGCCACCGGATCGAGTCCGTTCCGGAGCTTCCTCTCGTGATTAGCGATTCAGCCGAGGGAATCGAGAAGACCTCGTCTGCAATCAAGGTTTTGAAGCAGATCGGCGCGTTTCCTGATGCGGAGAAGGCGAAGGATAGCCATGCGATTCGAGCTGGGAAGGGTAAGATGAGGAACCGTCGTTACATTTCGAGAAAAGGTCCGTTGATTGTGTATGGTACTGAAGGTGCTAAGATTGTTAAGGCTTTTCGCAACATTCCGGGTATCGATTTGGTGAATGTCGAGAGGCTGAGTCTTTTGAAGCTTGCTCCTGGTGGTCATCTTGGGAGATTTGTCATCTGGACTAAATCTGCTTTTGAGAAGCTTGATTCCATTTATGGATCGTTCGAGAAGTCGGCCGAGAAGAAGAAGGGCTATGTTCTTCCAAGGGCCAAGATGGTCAATGCTGATTTGTCCAGGATCATCAATTCTGATGAGGTTCAATCTGTCGTTAAACCCATTAAGAAATCTGTGAAGAGACCTTCCTTGAAGAAGAACCCACTCAAGAATCTCAACGCCATGTTGAAGCTGAATCCTTATGCTAAAACTGCAAAGAGAATGTCTTTGTTGGCTGAGGCACAGCGTGTGAAAGCTAAGAAGGAAAAGCTTGACAAGAAGAGGAACATTATCCCTAAGGAGGAGGCTACTGCAGTCAGGGCAGCAGGAAAAGCATGGTACCAGACGATGATTTCAGATAGTGATTACACCGAGTTCGAAAACTTCTCGAAGTGGCTTGGCGTCTCTCAGTAA

Protein sequence

MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGAFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVERLSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIINSDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLDKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ

Homology

[Close]

BLAST of Sed0012327 vs. NCBI nr
Match: KAG6580580.1 (60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017334.1 60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 753.8 bits (1945), Expect = 7.5e-214
Identity = 387/406 (95.32%), Postives = 398/406 (98.03%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV VQSLEGDM TD+AP+VPLPDVMKA IRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYAVVSAIAASAVPSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQIG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIG 180

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           A PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAK+VKAFRNIPGID+VNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEKS+EKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           DKKRNIIPKEEATAV+AAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406

[Close]

BLAST of Sed0012327 vs. NCBI nr
Match: XP_023528888.1 (60S ribosomal protein L4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 751.1 bits (1938), Expect = 4.9e-213
Identity = 385/406 (94.83%), Postives = 398/406 (98.03%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV VQSLEGDM TD+AP+VPLPDVMKA IRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYAVVSAIAASAVPSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQIG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIG 180

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           A PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAK+VKAFRNIPGI++VNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEIVNVER 240

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEKS+EKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           DKKRNIIPKE+ATAV+AAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEDATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406

[Close]

BLAST of Sed0012327 vs. NCBI nr
Match: XP_023539772.1 (60S ribosomal protein L4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 750.4 bits (1936), Expect = 8.3e-213
Identity = 383/406 (94.33%), Postives = 399/406 (98.28%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV VQSLEGDM TD+AP+VPLPDVMKA IRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYAVVSAIAASAVPSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           AFPDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAK+VKAFRNIPGI++VNVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEKS+EKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKK+VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           DKKRNIIPKEEA+ +RAAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Sed0012327 vs. NCBI nr
Match: XP_022935156.1 (60S ribosomal protein L4-like [Cucurbita moschata])

HSP 1 Score: 750.4 bits (1936), Expect = 8.3e-213
Identity = 384/405 (94.81%), Postives = 397/405 (98.02%), Query Frame = 0


Query: 2   AAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVSK 61
           AAAAARPLV VQSLEGD+ TD+AP+VPLPDVMKA IRPDIVNFVHANISKNRRQPYAVSK
Sbjct: 3   AAAAARPLVAVQSLEGDIATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 62

Query: 62  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKIN 121
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 63  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 122

Query: 122 VNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGA 181
           VNQKRYAVVSAIAASAVPSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQ+GA
Sbjct: 123 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQVGA 182

Query: 182 FPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVERL 241
            PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAK+VKAFRNIPGID+VNVERL
Sbjct: 183 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 242

Query: 242 SLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIINS 301
           +LLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEKS+EKKKGYVLPRAKMVNADLSRIINS
Sbjct: 243 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 302

Query: 302 DEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLD 361
           DEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKLD
Sbjct: 303 DEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 362

Query: 362 KKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           KKRNIIPKEEATAV+AAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 363 KKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407

[Close]

BLAST of Sed0012327 vs. NCBI nr
Match: XP_023005914.1 (60S ribosomal protein L4-like [Cucurbita maxima])

HSP 1 Score: 750.0 bits (1935), Expect = 1.1e-212
Identity = 382/406 (94.09%), Postives = 399/406 (98.28%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV VQSLEGDM TD+AP+VPLPDVMKA IRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYAVVSAIAASA+PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           AFPDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAK+VKAFRNIPGI++VNVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEKS+EKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKK+VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           DKKRNIIPKEEA+ +RAAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Sed0012327 vs. ExPASy Swiss-Prot
Match: Q9XF97 (60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 8.7e-197
Identity = 347/405 (85.68%), Postives = 379/405 (93.58%), Query Frame = 0


Query: 2   AAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVSK 61
           AAAAARPLV VQSLEGDM TD   +V LPDVMKA IRPDIV FVH+NISKN RQPYAVSK
Sbjct: 4   AAAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSK 63

Query: 62  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKIN 121
           KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 64  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 123

Query: 122 VNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGA 181
           VNQKRYAVVSAIAASAVPSLV+ARGH+IE+VPELPLV+SDS EG+E+TS+A+KVLKQIGA
Sbjct: 124 VNQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGA 183

Query: 182 FPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVERL 241
           + DAEKAKDSH+IR GKGKMRNRRYI+RKGPLIVYGTEGAK+VKAFRNIPGID++NVERL
Sbjct: 184 YSDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERL 243

Query: 242 SLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIINS 301
           +LLKLAPGGHLGRFV+WTKSAFEKLDSIYGSF+K +EKK GYVLPR+KMVNADL+RIINS
Sbjct: 244 NLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINS 303

Query: 302 DEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLD 361
           DEVQSVV PI++  KR  LKKNPL+ LN MLKLNPYAKTA+RMSLLAEA+RVKAKKEKLD
Sbjct: 304 DEVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLD 363

Query: 362 KKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           KKR  I KEEA+ ++AAGKAWYQTMISDSDYTEF+NF+KWLGVSQ
Sbjct: 364 KKRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408

[Close]

BLAST of Sed0012327 vs. ExPASy Swiss-Prot
Match: Q9SF40 (60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 2.2e-192
Identity = 338/406 (83.25%), Postives = 376/406 (92.61%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV +Q+L+GDM TD + +V LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+A+VSAIAA+AVP+LVMARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQIG
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           A+ DAEKAK+S  IR GKGKMRNRRYISRKGPL+VYGTEG+KIVKAFRN+PG++L +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK +EKKKGYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDE+QSVV PIKK  KR  LKKNPLKNLN MLKLNPYAKTAKRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
            KKR  + KEEA A++AAGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 361 AKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of Sed0012327 vs. ExPASy Swiss-Prot
Match: P49691 (60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2)

HSP 1 Score: 669.8 bits (1727), Expect = 1.9e-191
Identity = 337/406 (83.00%), Postives = 374/406 (92.12%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           +A+AAARPLV VQ L+GDM TD + +V LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+A+VSAIAA+AVP+LVMARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQIG
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           A+ DAEKAK+S  IR GKGKMRNRRYISRKGPL+V+GTEGAKIVKAFRN+PG++L +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK +EKKKGYVLPRAKMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIK   KR  LKKNPLKNLN M KLNPYAKTAKRMSLLAEA RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           +KKR ++ KEEA A++AAGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 362 EKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of Sed0012327 vs. ExPASy Swiss-Prot
Match: P02385 (60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2)

HSP 1 Score: 441.4 bits (1134), Expect = 1.1e-122
Identity = 222/361 (61.50%), Postives = 280/361 (77.56%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           ++ A ARPL+ V S +G+    S  +V +P V KA IRPDIVNFVH N+ KN RQPYAVS
Sbjct: 3   VSMACARPLISVYSEKGE---TSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 62

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPTK WRRWHR++
Sbjct: 63  KLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRV 122

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           N  QKRYAV SA+AASA+P+L+M++GHRIE +PE+PLV+ D  E  +KT  A+ +LK++ 
Sbjct: 123 NTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLK 182

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           A+ D +K   S  +RAGKGKMRNRR I R+GP ++Y  E   I+KAFRNIPGI L+NV +
Sbjct: 183 AWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGIIKAFRNIPGITLLNVSK 242

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LL+LAPGGH+GRF IWT+SAF KLD +YG++ KSA+ K  Y LP  KM N DL+RI+ 
Sbjct: 243 LNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILK 302

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           S E+Q  ++   K VKR  LKKNPLKNL  M++LNPYAKTA+R ++L + + +KAK++K 
Sbjct: 303 SQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKP 359

Query: 361 D 362
           D
Sbjct: 363 D 359

[Close]

BLAST of Sed0012327 vs. ExPASy Swiss-Prot
Match: Q9D8E6 (60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3)

HSP 1 Score: 441.0 bits (1133), Expect = 1.4e-122
Identity = 226/378 (59.79%), Postives = 283/378 (74.87%), Query Frame = 0


Query: 4   AAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVSKKA 63
           A ARPL+ V S +G+    S  +V LP V KA IRPDIVNFVH N+ KN RQPYAVS+ A
Sbjct: 2   ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 61

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKINVN 123
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPTK WRRWHR++N  
Sbjct: 62  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 121

Query: 124 QKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGAFP 183
           QKRYA+ SA+AASA+P+LVM++GHRIE VPELPLV+ D  EG +KT  A+++LK++ A+ 
Sbjct: 122 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVQLLKKLKAWN 181

Query: 184 DAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVERLSL 243
           D +K   S  +RAGKGKMRNRR I R+GP I+Y  +   I+KAFRNIPGI L+NV +L++
Sbjct: 182 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNI 241

Query: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIINSDE 303
           LKLAPGGH+GRF IWT+SAF KLD +YG++ K+A  K  Y LP  KM+N DLSRI+ S E
Sbjct: 242 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSPE 301

Query: 304 VQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLDKK 363
           +Q  ++  +K + R  LKKNPLKNL  MLKLNPYAKT +R ++L +A+  K + +KL+  
Sbjct: 302 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVKKLEAA 361

Query: 364 RNIIPKEEATAVRAAGKA 382
              +  +    V   G A
Sbjct: 362 ATALATKSEKVVPEKGTA 375

[Close]

BLAST of Sed0012327 vs. ExPASy TrEMBL
Match: A0A6J1F3R9 (60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111442111 PE=3 SV=1)

HSP 1 Score: 750.4 bits (1936), Expect = 4.0e-213
Identity = 384/405 (94.81%), Postives = 397/405 (98.02%), Query Frame = 0


Query: 2   AAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVSK 61
           AAAAARPLV VQSLEGD+ TD+AP+VPLPDVMKA IRPDIVNFVHANISKNRRQPYAVSK
Sbjct: 3   AAAAARPLVAVQSLEGDIATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 62

Query: 62  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKIN 121
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 63  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 122

Query: 122 VNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGA 181
           VNQKRYAVVSAIAASAVPSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQ+GA
Sbjct: 123 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQVGA 182

Query: 182 FPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVERL 241
            PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAK+VKAFRNIPGID+VNVERL
Sbjct: 183 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 242

Query: 242 SLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIINS 301
           +LLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEKS+EKKKGYVLPRAKMVNADLSRIINS
Sbjct: 243 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 302

Query: 302 DEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLD 361
           DEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKLD
Sbjct: 303 DEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 362

Query: 362 KKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           KKRNIIPKEEATAV+AAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 363 KKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407

[Close]

BLAST of Sed0012327 vs. ExPASy TrEMBL
Match: A0A6J1L0N2 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111498775 PE=3 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 5.3e-213
Identity = 382/406 (94.09%), Postives = 399/406 (98.28%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV VQSLEGDM TD+AP+VPLPDVMKA IRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYAVVSAIAASA+PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           AFPDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAK+VKAFRNIPGI++VNVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEKS+EKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKK+VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           DKKRNIIPKEEA+ +RAAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Sed0012327 vs. ExPASy TrEMBL
Match: A0A6J1J5G3 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111481914 PE=3 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 6.9e-213
Identity = 384/404 (95.05%), Postives = 396/404 (98.02%), Query Frame = 0


Query: 3   AAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVSKK 62
           AAAARPLV VQSLEGDM TD+AP+VPLPDVMKA IRPDIVNFVHANISKNRRQPYAVSK+
Sbjct: 2   AAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR 61

Query: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKINV 122
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121

Query: 123 NQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGAF 182
           NQKRYAVVSAIAASAVPSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQIGA 
Sbjct: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIGAL 181

Query: 183 PDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVERLS 242
           PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAK+VKAFRNIPGID+VNVERL+
Sbjct: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241

Query: 243 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIINSD 302
           LLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEKS+EKKKGYVLPRAKMVNADLSRIINSD
Sbjct: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD 301

Query: 303 EVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLDK 362
           EVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAK+EKLDK
Sbjct: 302 EVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKQEKLDK 361

Query: 363 KRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           KRNIIPKEEATAV+AAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 362 KRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of Sed0012327 vs. ExPASy TrEMBL
Match: A0A6J1FVZ1 (60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111448977 PE=3 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 2.6e-212
Identity = 381/406 (93.84%), Postives = 398/406 (98.03%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV VQSLEGDM TD+AP+VPLPDVMKA IRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYAVVSAIAASA+PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           A PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAK+VKAFRNIPGI++VNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEKS+EKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKK+VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           DKKRNIIPKEEA+ +RAAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Sed0012327 vs. ExPASy TrEMBL
Match: A0A6J1CWH7 (60S ribosomal protein L4 OS=Momordica charantia OX=3673 GN=LOC111015034 PE=3 SV=1)

HSP 1 Score: 740.3 bits (1910), Expect = 4.2e-210
Identity = 377/406 (92.86%), Postives = 397/406 (97.78%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV VQSLEGDM TDSAP+V LPDVMKA IRPDIVNFVHANISKN RQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDSAPTVHLPDVMKASIRPDIVNFVHANISKNSRQPYAVS 60

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYAVVSAIAASA+PSLVMARGHRIESVPE+PLVISDSAEGIEKTS+AIKVLKQIG
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVMARGHRIESVPEMPLVISDSAEGIEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           AFPDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAK+VKAFRNIPGI++VNVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTK+AFEKLDSIYGSFEK +EKKKGYVLPR+KMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVKPIKK VKRPSLKKNPLKNLN+ML+LNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKDVKRPSLKKNPLKNLNSMLRLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           DKKRNIIPKE+A+A++AAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEDASAIKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406

[Close]

BLAST of Sed0012327 vs. TAIR 10
Match: AT3G09630.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 672.9 bits (1735), Expect = 1.6e-193
Identity = 338/406 (83.25%), Postives = 376/406 (92.61%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV +Q+L+GDM TD + +V LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+A+VSAIAA+AVP+LVMARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQIG
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           A+ DAEKAK+S  IR GKGKMRNRRYISRKGPL+VYGTEG+KIVKAFRN+PG++L +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK +EKKKGYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDE+QSVV PIKK  KR  LKKNPLKNLN MLKLNPYAKTAKRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
            KKR  + KEEA A++AAGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 361 AKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of Sed0012327 vs. TAIR 10
Match: AT5G02870.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 669.8 bits (1727), Expect = 1.3e-192
Identity = 337/406 (83.00%), Postives = 374/406 (92.12%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           +A+AAARPLV VQ L+GDM TD + +V LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+A+VSAIAA+AVP+LVMARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQIG
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           A+ DAEKAK+S  IR GKGKMRNRRYISRKGPL+V+GTEGAKIVKAFRN+PG++L +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK +EKKKGYVLPRAKMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIK   KR  LKKNPLKNLN M KLNPYAKTAKRMSLLAEA RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           +KKR ++ KEEA A++AAGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 362 EKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of Sed0012327 vs. TAIR 10
Match: AT3G09630.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 666.8 bits (1719), Expect = 1.1e-191
Identity = 337/406 (83.00%), Postives = 375/406 (92.36%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV +Q+L+GDM TD + +V LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+A+VSAIAA+AVP+LVMARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQIG
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           A+ DAEKAK+S  IR GKGKMRNRRYISRKGPL+VYGTEG+KIVKAFRN+PG++L +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK +EKKKGYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDE+QSVV PIKK  KR  LKKNPLKNLN MLKLNPYAKTAKRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
            KKR  + K EA A++AAGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 361 AKKRKTVTK-EALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 405

[Close]

BLAST of Sed0012327 vs. TAIR 10
Match: AT5G02870.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 663.7 bits (1711), Expect = 9.6e-191
Identity = 336/406 (82.76%), Postives = 373/406 (91.87%), Query Frame = 0


Query: 1   MAAAAARPLVVVQSLEGDMVTDSAPSVPLPDVMKACIRPDIVNFVHANISKNRRQPYAVS 60
           +A+AAARPLV VQ L+GDM TD + +V LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+A+VSAIAA+AVP+LVMARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQIG
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRAGKGKMRNRRYISRKGPLIVYGTEGAKIVKAFRNIPGIDLVNVER 240
           A+ DAEKAK+S  IR GKGKMRNRRYISRKGPL+V+GTEGAKIVKAFRN+PG++L +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LSLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSAEKKKGYVLPRAKMVNADLSRIIN 300
           L+LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK +EKKKGYVLPRAKMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKSVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIK   KR  LKKNPLKNLN M KLNPYAKTAKRMSLLAEA RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNIIPKEEATAVRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           +KKR ++ K EA A++AAGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 362 EKKRKVVTK-EAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 406

The following BLAST results are available for this feature:

BLAST of Sed0012327 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580580.1	7.5e-214	95.32	60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_023528888.1	4.9e-213	94.83	60S ribosomal protein L4-like [Cucurbita pepo subsp. pepo]	[more]
XP_023539772.1	8.3e-213	94.33	60S ribosomal protein L4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022935156.1	8.3e-213	94.81	60S ribosomal protein L4-like [Cucurbita moschata]	[more]
XP_023005914.1	1.1e-212	94.09	60S ribosomal protein L4-like [Cucurbita maxima]	[more]

BLAST of Sed0012327 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF97	8.7e-197	85.68	60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1	[more]
Q9SF40	2.2e-192	83.25	60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1	[more]
P49691	1.9e-191	83.00	60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2	[more]
P02385	1.1e-122	61.50	60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2	[more]
Q9D8E6	1.4e-122	59.79	60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3	[more]

BLAST of Sed0012327 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3R9	4.0e-213	94.81	60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111442111 PE=3...	[more]
A0A6J1L0N2	5.3e-213	94.09	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111498775 PE=3 S...	[more]
A0A6J1J5G3	6.9e-213	95.05	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111481914 PE=3 S...	[more]
A0A6J1FVZ1	2.6e-212	93.84	60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111448977 PE=3...	[more]
A0A6J1CWH7	4.2e-210	92.86	60S ribosomal protein L4 OS=Momordica charantia OX=3673 GN=LOC111015034 PE=3 SV=...	[more]

BLAST of Sed0012327 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09630.1	1.6e-193	83.25	Ribosomal protein L4/L1 family	[more]
AT5G02870.1	1.3e-192	83.00	Ribosomal protein L4/L1 family	[more]
AT3G09630.2	1.1e-191	83.00	Ribosomal protein L4/L1 family	[more]
AT5G02870.2	9.6e-191	82.76	Ribosomal protein L4/L1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 343..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..74
None	No IPR available	PANTHER	PTHR19431	60S RIBOSOMAL PROTEIN L4	coord: 3..406
None	No IPR available	PANTHER	PTHR19431:SF6	BNAC03G35890D PROTEIN	coord: 3..406
IPR025755	60S ribosomal protein L4, C-terminal domain	PFAM	PF14374	Ribos_L4_asso_C	coord: 281..353 e-value: 3.7E-28 score: 97.3
IPR002136	Ribosomal protein L4/L1e	PFAM	PF00573	Ribosomal_L4	coord: 27..267 e-value: 9.1E-40 score: 136.4
IPR023574	Ribosomal protein L4 domain superfamily	GENE3D	3.40.1370.10		coord: 4..309 e-value: 6.2E-143 score: 477.4
IPR023574	Ribosomal protein L4 domain superfamily	SUPERFAMILY	52166	Ribosomal protein L4	coord: 11..268
IPR013000	Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site	PROSITE	PS00939	RIBOSOMAL_L1E	coord: 121..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012327.1	Sed0012327.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome