Sed0012282 (gene) Chayote v1

Overview


Name	Sed0012282
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG08: 22693829 .. 22694717 (-)
RNA-Seq Expression	Sed0012282
Synteny	Sed0012282

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGTGGTGATGTCAAACCTGGGAGACAAGATTGGTCATTTCCTTGATGTTGATATTGATGTCAAAGGGAGGTGCAGAAGTAATGTGCTTAGAATCAAAGTCCTAGTTGATATTCTAAAACCCCTAAAGAGAGGGATGTTCGTGAAAGTGGGTTAAATGAGGGAGGATTAGTGGGCCCCTATGGCATACAAAAAGCTTTCAGAGATGTGTTTTGGGTGCGGGTTGATTGGTCCTAATATCTGATTTTGTCCTAAGAGTAAGCATCTAAAAAACGAGGAACTACTCTATGGGGATTGGATGCGTGCAGTGTGGCCGGTTGGGGAAGATTCGGCTAAAAGGTCAAATTCCCCCAAAAAAATAAGAAAAGTTGACAAGGAAAGGAAAAGGGGTTCGATTCTCGGGTTTGCAGGGAGGTGAATTCTCTGAAGGCAGTGACCCTAACTCTGAGCAAGGGAGACACCTGGAGGTGCAAAAGGAAAAGACCTGGTCGATAAGGGGAACACATGGGAGAGGAAGAAGAAGCTTGGGGAATGGATCTAGAGAAAATTGGATGGCTAGGAGGAGCGAAGAAGAAGGTCCGTGGAGAAGAGATAGGGGTGATCTGAATCAAAGGAGGATAGAGAAGACGGTGGCAGATAGCTCGCCGGACGGTGCCGATGATCAGAAAAGGAAAGCGAAAGACGGAGAGGATCAACTGTCAAAATTGGAGCAAGAAAAGCAGACGTCGAGTCAGAATCAGATGAATTTGACAGAGAAGTCAGAATTAGGGTCGGCTGTGGTTATGGATGGATTTGCAGAGGTTAGAGCCAGACGTGTTGTCTTTTTAGGATCAGGGGAGATATTGGACTCGTTTGACAAAGAAGGGTTTTTAGAGCTGAAGATTTGA

mRNA sequence

ATGCTAGTGGTGATGTCAAACCTGGGAGACAAGATTGGTCATTTCCTTGATGTTGATATTGATGTCAAAGGGAGGTGCAGAAGTAATGTGCTTAGAATCAAAGTCCTAGTTGATATTCTAAAACCCCTAAAGAGAGGGATGTTCGTGAAAGGAGGTGAATTCTCTGAAGGCAGTGACCCTAACTCTGAGCAAGGGAGACACCTGGAGGTGCAAAAGGAAAAGACCTGGTCGATAAGGGGAACACATGGGAGAGGAAGAAGAAGCTTGGGGAATGGATCTAGAGAAAATTGGATGGCTAGGAGGAGCGAAGAAGAAGGTCCGTGGAGAAGAGATAGGGGTGATCTGAATCAAAGGAGGATAGAGAAGACGGTGGCAGATAGCTCGCCGGACGGTGCCGATGATCAGAAAAGGAAAGCGAAAGACGGAGAGGATCAACTGTCAAAATTGGAGCAAGAAAAGCAGACGTCGAGTCAGAATCAGATGAATTTGACAGAGAAGTCAGAATTAGGGTCGGCTGTGGTTATGGATGGATTTGCAGAGGTTAGAGCCAGACGTGTTGTCTTTTTAGGATCAGGGGAGATATTGGACTCGTTTGACAAAGAAGGGTTTTTAGAGCTGAAGATTTGA

Coding sequence (CDS)

ATGCTAGTGGTGATGTCAAACCTGGGAGACAAGATTGGTCATTTCCTTGATGTTGATATTGATGTCAAAGGGAGGTGCAGAAGTAATGTGCTTAGAATCAAAGTCCTAGTTGATATTCTAAAACCCCTAAAGAGAGGGATGTTCGTGAAAGGAGGTGAATTCTCTGAAGGCAGTGACCCTAACTCTGAGCAAGGGAGACACCTGGAGGTGCAAAAGGAAAAGACCTGGTCGATAAGGGGAACACATGGGAGAGGAAGAAGAAGCTTGGGGAATGGATCTAGAGAAAATTGGATGGCTAGGAGGAGCGAAGAAGAAGGTCCGTGGAGAAGAGATAGGGGTGATCTGAATCAAAGGAGGATAGAGAAGACGGTGGCAGATAGCTCGCCGGACGGTGCCGATGATCAGAAAAGGAAAGCGAAAGACGGAGAGGATCAACTGTCAAAATTGGAGCAAGAAAAGCAGACGTCGAGTCAGAATCAGATGAATTTGACAGAGAAGTCAGAATTAGGGTCGGCTGTGGTTATGGATGGATTTGCAGAGGTTAGAGCCAGACGTGTTGTCTTTTTAGGATCAGGGGAGATATTGGACTCGTTTGACAAAGAAGGGTTTTTAGAGCTGAAGATTTGA

Protein sequence

MLVVMSNLGDKIGHFLDVDIDVKGRCRSNVLRIKVLVDILKPLKRGMFVKGGEFSEGSDPNSEQGRHLEVQKEKTWSIRGTHGRGRRSLGNGSRENWMARRSEEEGPWRRDRGDLNQRRIEKTVADSSPDGADDQKRKAKDGEDQLSKLEQEKQTSSQNQMNLTEKSELGSAVVMDGFAEVRARRVVFLGSGEILDSFDKEGFLELKI

Homology

The following BLAST results are available for this feature:

BLAST of Sed0012282 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0012282 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0012282 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0012282 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012282.1	Sed0012282.1	mRNA