Sed0012262 (gene) Chayote v1

Overview


Name	Sed0012262
Type	gene
Organism	Sechium edule (Chayote v1)
Description	high mobility group B protein 6-like
Location	LG13: 5927890 .. 5936501 (-)
RNA-Seq Expression	Sed0012262
Synteny	Sed0012262

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACGAAGATTACGCAGCCACCGGAAAAGGAGATCCTCCTTCAGAATTTATCTTCGGCTAAGAAATCGAAATCCAAAGCGGCGCCGAAGAAGTAGTTCATTCGACAACGATTTGCAGGAAATGCAGGACATGCTTCAACGATTGAAGCTCGATGAGGAAAAGACGGAGGAGCTTTTGATAGCTAAAGACGAGATGCTTAAGCTGAAGGATGAAGAGATTAAAACGAGAGATCAACAACAGGAGATGCTCCAGATCGAATTGAAGAAGTTGCAGAAATTGAAGGAGTTCAAACCTAATATGGTAATTCGTTTCCTGATCTTGTGTTTTTTCTTTTCTTTCTGATTTTTTTTGTATACTGAGATGAAATTAACTAGAAATTGTTACTTTTCTGTTTGAATTAGCTGAAATTAGAGTTCTATATGGTTCGATTGTATTGAGTTTAGGTTCGAATGATTTATTTGGACTAACTCAAAATATTGGGTCCGCAAACTCGTCGAATCTTGATTGAGTTGGCTCGTCAGGTTGTGATTATCTTAATTTTCCTTATAAGACTTGGCCCATACCTCATGAATCTATAAACAAAAAGTGAAGAAAAATAGTATGATAGTGAATTCAAATCCAAGATGTTCATGTTGCTAGTACATTCACTATTAGCATGCTAAAAACTTATCTGATTAATTAATCTTACACATATATATACTATTATTCTTAGTTCCGGTTGTGTTGCGACTAACGAGCAAGAAATTGGACATAGTTTGCATCGGGTTTCTGGTTGTCCATTTTTTTGTACACCCCTAATTGAAATTAATTAGTGTAACCGGAAGAAATTTTCAGATCTGGTTTGGTTTTCATTTTTGATTGTTGCATTTTTCCTTCTCAACCAGAATTTCCCTATGATTCAAATTTTGAAAGATTGAACAAGATAAGACAGATAAGAAGAAGTGTGCAGAAAAGAAGAGGCTCTGTTGGTTTATGACTCACATATTTGTATTAGGGAATTTTGTGTATTTAACCTTTTTACCACAATCTCGGGTAATTTTGTATTTCCATTTGGGCCTTGTGAGTTAGGGTTTTTTGTGACCCTTTGATCAATGTTCTCCCTTCTCCTCCAAATGGAAATACAATTTGGCTCTTGGTTCGACAGTGGAGTAGGGAATTTCTTGAACCACTATAATATATTTGGTCTCTCCTTCTCTATATTTACTCATTTATGTTTTAATTTGTTCATTGATTTCTTATCAAGCATATTTATGTTTTAAGATTTTTATGCTAACAATTGGTATGAAAGCCTTTTGTTAGGAGAGTTCTTAGATTAGTTTAATTCTCAATTTGACTCAATTCTCTTCAATTTGTATTTGTAGGCTATAGATTTTGTGGGATTTTCTTTTTGGAGAAATCTAGGAATTTCACAGGGTAATCGGCAATATTCATGACTGAGGCGTGTCTTTGCAATTTGTTTTTTTGAATTATATGGTTGTTTCTATTTGGTTCCATGTTGATTGCGTCAAGATGGTAATTTGTGCATTTAATCGGCAATTGGAATGTTTCACCTAGGTTTTAAAAACTGTGATTTTGCTAATTCAAGCAGTACATTATAATAGTGACTATGGTGGAAATATCCAAGTGGCTTCATTTTGTTGTTTTGGAAATAGAAAGTTAAGTTTGACTTTAGTGATTTTCTCCACATACTCTTTCAGACGGTGGTTTATTCATCATGAGTGATATTTGCAGTTGGAGAGTGGTATTGTGAATTTGGTGGGCTGTCTTGATTCATGGTTTAGTGGTTTCAAAATAGGAGAGATTTTGTGAAATTGATCATTAAGATTAATTTATTGTCTTTAAAAATTAGTCTCCTGGCATATATTCCATTGGTATTGGATATTTATTTTGAAAACAAATATATTGTTTAGTTCGTGAGTTTTGTGTTTGAGATTTCCTAAGACAGTATTTGATGGATTCCCTACAATTGCAAGCAATTGTGTGATATTTGAATTTCGAGAGCATGCAATTGGGTTGGGGCTTCAATTTCAGGTATTTGCAAATTGCATTTGAGTGAGTTTGCATAGTGATTGTTCAAGTTGTATTGGTATTTGCCTATGTGATTGGGTGAAATTTGTTACTTGGACGTTTGTGGCACTATTTTTTTTTTTTTTGAAGTGGTTGTTATTGTTTTTAGAGATTTGAGAATTGTGGACTTTTGATGGATTATATTGTGTATCTCTCGTTTGGTTAGTTGTTTGTGTTGCAAAAGATGACATCATTATTTTGAATTGGCAAAATTTGATGGAATTGACGATTTCAGTCTTTGAAAGAATAAAGGTGAGAGCACTCTGTTCAACAAAAGGTAGCAAAAGCATTTGATCCAAGTAAGTTTCCTACCACTATGATTGATAAGCAGAAAATTGAGATATCCGAAATTGTGTTTAGTACTGTGATATTGCATCTTGCTGATAATGTGTTGTTTATGGTAAAAGAGAGGTTATTTGTTTTCCGCATGTATTCGTCAAAAGGTTTAGAAGAGAACATTGAGAATTTATTTAAATTTGGGGGGATGGATTTGGTTTACTCTCGTAAAAAATTAGACTCTGAAAATCAAGCTACAATTTTCCTTAATTTGTTGCTTGATAAGTTTATAGAGATCAATTTGTTATGTCTCCCTTTCGACTGTTTTTGGTTGATCATTTGGTTAGTTATGATCAACATTGTGAAGTCAAAGGGATTTGTTCAGTTAAGCTGAAATTGGATGATGGGGGAATTTAGAGATGTCCCAGGATTAAGAAGAAATTTGATATCCTTGGGTACTTCGGATAAGGCAGGTTGTATCTCTGAGTCTAGTAATGGATTATTATTGGTCACTAAGAATAATCATGTTTGTGCTTTTAGGCAGTGTTATTGTTGGTGAAGTTAAATCTCTGAACCTTTTGGGAATTTCATTTTGTGAGAGCATTATGGATAATTGCTCTATACTTAGTTTTACAGTTGAAAAACATAAGTTTGATAGAGGTTGGTGGTTGGTCACACGTCCATTGGATAATTTCTCTATACTTAGTTTTTCGTATTAAAAACATAAGTTTGATAGAGTTTGGTTGCACATCCATTCTAATTTGGGGGGTCCGGTTAGGATCCAAGTTTGTGGTGGTTTTATAAATTGGTCCTTGACGTTTGATAATTTGGGTGGGTTCAAGGAAATTATGTGTCTATCGGTTGCCCTCACAGCTTCAGTCTTACCAACTGATTAGAGACAAAGATTGGTTATAAAACTATATTGTCCAGTATTTTGAGAAAATAGACTCATTGGGTTATGCCTTATCTGAATTTGGATCTGACTTTGAAATTTGGATTGAAGATTTGTTTGTCATTTGCAAGTGGCTTAAAAGTTCGGGTTATCCTTGTTACTACAAGGTTAGGCCTGTGGCCTAAGATTTCACACAAGAAAAGACCATTTGTTATGTTGAGGTGTTTTCACCTATTGTTTATTTTATTTCCCTACTATAGTTTTCTTGCATGAATTTTTGGATGAGGATTTGGTACAGTCACTTGGTTTTGTTCAAGAGGGCTAGCATCGTTTAGTTTGACGTTTGCAAAATTTGGTTTATGCTGATTTGTTTAAGGTTCTCTTGTATTTTGTGGACATTTTGTTTGCTTCAATCAATTCTTAAATTTTGGCACGTTATTCATTAAATTTATTGATTCTGATGGTTCAGGTTGGCAACCGATTTGAATAGGAGAAATTTAACAAGATATGTGCTCATGCTCTATGGTAGTGTGATCAGTTGGAAATTGAATTTGAGGTCTGTTGTTGTTCTCTATTCTACTGAGGTTGGACATTTGTTTTACTGAATCAGTTAAGGAATCAGTTTTGGTTAAAGGGTTGATTTCTGAAATTTTTAGTTTGTAACTGTTCTACATATTGTTAATTAAGGTGTTTTAGTATCATCTAAATATCCTAATTTTGGTCGAACCAAATATGTATTTGGGAGGTTCATTTTTTTTTGTGATGCAGTACATGAGACAAAAATTGTTTTATTCAAGATCAACACCGTTCTCACATCAGTTGATATTATGAAGTTTATGCTAGTTGCAGATAGTTTTGAGATCTCATTGATTTACTCAAACTTGGAGCTGGGCTAATTTGTTCGTGACAATTTGTAACTCCATATGCTCGTCAAGAGGGTGATTGTTTGGTTTGTAACTCACACCTTTGTATTAGGGAATTTTGTATATTTAACCTTTTTACCATAGGTTAAGTGTTTATTACCTTGGATAATTTTGTATTCCCATTTTTTGGTCTGGTGAGTTAGGGTTTTTTGTGACCCGTTTGTAACCCCTATTTAAGCATCCTTATGAGTGAGTTTTTTCTTTGAGAGAGACATTAGAGATGTAGAGCATTTGATGAGGTTTTAGGGTTTGAGCAATGGTTCTCCCTTCTCCTCTAGTAGAATTTGGCTCTTGGCTCGACAGTGGAGTAAGGAATTTCTCGAACCACTATATATATCTGGTCTTCTCCTTATTAGACATATTTATGTTTTGAGATTAAATTGCTAACAATTGGTATCATCAGAGCCTTTTGTTAGGAGAGTTCTTAGATAAGTTTGTTAGGAGAGTTTCTTAGATAAGTTTAATTTTCAATTTAACTCAATTCTCTTCCATTTGTATTTGATACTGGCTTATTTTGTGGGATTTTCTTTTCGGAGAAATCTAAGAATTTCACAGGGATTTTAATCGGCAATATTCATGACTGAGGCGTCTTTGCAATTTGGTTTTTTGAATTATATATGGTTGTTTCTATTTGGTTCCATGTTGATTGCGTCAAGATGGTAATTTGCATTTAATCGACAATTGGAAAACTGTGATTTTGCTTGTAATTCAAGCAGTATTACATCATAATAGTATTCTATGGTGGAAATATCCAAGTGGCTTCATTTGTTTTTTTTGGAAATATAAAGTTAAGTTTGACTTTAGTGATTTTCTCCACATACTCTTTCAGACGGTGGAAAGATCAGTGGAACGAGGTAAATCACAGTCCTAATTTTTTATTATAAGATGACTATAAGTAATTTCTTTAGAGATTTACAATCCGCTTGTAATCTCTGACACAGATCAAGAAGGAGAATCCAGAGGCAGAGTTCAAGGAAATCTCAAACATTTTAGGGGCAAAATGGAAGAGTGTTACTGCAGAGGAAAAGAATATGAGGAGAGGTAATCTGAAAAAGAAGCTTATTTACGGATAACTTCTAAAGAGAAACGCAAGACCGAGGCGATGAAGCTGTTATTTCTTATGCTTTTAAGTAATTGGTGATCTTTATTGTAACTGATATGTAACTGGTTTGAATTTGGAATGTATTTGGCCATGTGCCCTTTTGTAATTTCATATCTATTACGAAATTGTTTCTTATCCAAAAAAAAGAAGCTGTTAGAAGAGGAGTAAGAAGCAGAAGAAGAGGAAGCTGAAAGAGGAAGCTGCTTTGATTACCTTCAATTCAAAGAGGAAGCTGAAAAGGAGAACAAGAAGAAGTAAGTTGTACCATTGTTATCTATTGTCTTTATGCTTAACTTTGTGAAAGTGCTTTGTTCATGTTTGAGATAAAATGTCTCTTAGGAAAAAGAAGGATCCCCATTAAAGCCTAAACAACCAATGTCTTTTTGCTTAACTTTGTGAAAGTGCTTTGTTCATGTTTGAGATAAAATGTCTCTTAGGAAAAAGAAGGATCCCCATTAAAGCCTAAACAACCAATGTCTTTTTGCTTAACTTTGTGAAAGTGCTTTGTTCATGTTTGAGATAAAATGTCTCTTAGGAAAAAGAAGGACCCCCATTAAAGCCTAAACAACCAATGTCTTTTTGCTTAACTTTGTGAAAGTGCTTTGTTCATGTTTGAGATAAAATGTCTCTTAGGAAAAAGAAGGATCCCCATTAAAGCCTAAACAACCAATGTCTTTTTGCTTAACTTTGTGAAAGTGCTTTGTTCATGTTTGAGATAAAATGTCTCTTAGGAAAAAGAAGGATCCCCATTAAAGCCTAAACAACCAATGTCTTTTTGCATAACTTTGTGAAAGTGCTTTGTTCATGTTTTTCATCCTCTCAAACGAGAGGCGTGCATCTCTTTTTGCTGAGAACAAGGAACATCCTAGAGTTTAGATTAGGCCTCGCTTAATAGTTTTCTTGTTTCTTGTTTTATATTTTTGTAGAACACGAATATATATTTGATAACTGATTTATTTGTTTTTCTAATAAAATTATAAGAATTTTCGAAAAGTTGCCTCTAATTGGAAATGATTATCAAACAAACTAGTTTCTAGAGTTTAGATTAGGCCTCGCTTGATAGTTTTCTTGTTTCTTGTTTTATATTTTTATAGAACACGAATATATTTGGTAACTGATTTATTTGTTTTTCTAATAAAATTATAAAAATTTTAGAAAAGTTGCCTCTAATTGGAAATGATTATCAAACAAACTAGTTTCTAAAATGAGGAGTAGAAACAAGAAATGGAAAAGTTATGCCCCATTTGATAATTAATAATAATTTGTTTAGTTTTTTGTTTTTTGAAAATAAAATCTACGACAAGTATTTAACCATATGATTTATCTTATAATGATATCCATATCTTATCCATGTTTTTTGAAACCCGACCAAAATTTAGAAATTGAAAAAATAGCTTCCAAAAACATACTTGGTTTGGTTTTGCTTACTTAAAAGGGAAAATGAAAGGTGGAGAATTTGAATGAAAATAAAATTTACGACAACTATTTTACCATATGATTTATCTTATAATGATATCCATATCTTACCCATGTTTTTTGAACCCCGACCAAAATTTAGAAATTGAAAAAATAGCTTCCAAAAACATACTTGGTTTGGTTTTGCTTACTTAAAAGGGAAAATGAAAGGTGGAGAATTTGAATGAAAATAAGTTTAAAATTTCAAAACCTTAGTAAATGGGTCCTTAACAACTAGCTTTCAATTCTTGAATTGGGAATTCTTTGTGTTTGTGTTAGGGGGGGAGTTCCATTGGCTTTTGGAGTCCAATTTTGTGACTGTCCATTTGTGATTCCATTCAGGTAGCAAAGATAACGGAGAGGAGTGGAAGAACATGACTGAGGAGCAGGGAGGAGGTCCTTATGAAGGGGTCAACATTCATCAGAATTTAAGATAAAAACATATCTTTTTGATATTCATCCTAGATTGATATTAACTTTTGAACATATGCAGTTGGCAAACAAGGAAAGATACATGCAGGAGATGGAAGTTATACAAGCAGAAAAAGGAGGAGGAAGCAGCTATCATTAAAAAAGAAGAGGAAGAGCAGATGAAGCTTCATAAACATGAAGCTTTGTTGTTGGTGAAGAAGAAAGAGAAAACTGAGACCATTATCAAGGTTTAAAGATTGCATTTAAATTTATTGCACAACAATAATTAGACAAGACATTAATATGTGTAATGACAAACAATAATCAGAAAACAAAGGACGAGCTCAAGAAGAAGGGAAGGGAAGAAGAATGTTGATCCTAACAAGCCCAAGAAGCCTGCATCCTCTTACATCTTATTCTGGTTAAAGAAAACAAAACTCCCTCTAAAGAGAATAATTTCATAGGGTGTAAAAAAAAAAAGAATAATTTCATATGTGGGAGTATGTAGCAAGTAGAAGGGAGTGATTCAGGTTAAAGAAAAACAAAGCTCCCTCTAAAGAGAATAATTCCATAGGGTGTAAAAAAAATAGAATAATTTCATATGTGGGAAGTATGGAGTAAGTATGGAGCAAGTAGAAGGGAGTGATTTAGCAGGAAGAATGAGAATTCAAGTAGATGATTATGCATGTTTGGGTGAGGGAATGATTATGAGTGGAATTATTAACTGGTTTTTTTTTTCTTTTAACATTTGGTAATATTCCATAGGGTGTAAAAAAAATAGAATAATTTCATATGTGGGAAGTATGGAGTAAGTATGGAGCAAGTAGAAGGGAGTGATTTAGCAGGGAGAATGAGAATTCAAGTAGATGATTATGCATGTTTGGGTGAGGGAATGATTATGAGTGGAATTATTAACTGGTTTTTTTTTTCTTTTAACATTTGGTAATATTCGGGATTTGGGTCACTATTTTGGTGAGACATAGTGCCTAATCCTTGAAAATTTGGTGGATATCAAGGACCGAAGAAAATTTAAGTAGATGACTACCATGAATTATTATGTGGGGGGTGGTAATAATTAGTTATGAGGGAGTGAATAATGGTTATGGAAAGTATGAATGGTGATTATGGGTGAGTGCCTCAAATGTGAGAGGAAATTATATTACCCTTACTCCAGATTGTGATACCCTCAAACCAAACACCCATTAAGAGAAAGCTTGAGTCTGATTTATTTTGTAATTGCAGCAAAGAAGCAAGGAATAGTGTAATGGAGGAGAGAGACCAGGTGTAAACAATTCCAATTATTTTTCTGTTAGTACTGCAAGAAAGTTTTGGAATTCTAGTTGAGCTGATATATATAGTGTGTTATGTTCTTAAATTAATTTGGGTTTGAATATAATATATAGGAACTAAGCAAGCTGCAGAAGCAATGGAGTGGAGGGTTACAAAAAGGAAGTTATTAAAGCAAGTTGGGGGAAAGCTTGA

mRNA sequence

ATGGAGACGAAGATTACGCAGCCACCGGAAAAGGAGATCCTCCTTCAGAATTTATCTTCGGCTAAGAAATCGAAATCCAAAGCGGAAATGCAGGACATGCTTCAACGATTGAAGCTCGATGAGGAAAAGACGGAGGAGCTTTTGATAGCTAAAGACGAGATGCTTAAGCTGAAGGATGAAGAGATTAAAACGAGAGATCAACAACAGGAGATGCTCCAGATCGAATTGAAGAAGTTGCAGAAATTGAAGGAGTTCAAACCTAATATGATTGAACAAGATAAGACAGATAAGAAGAAGTGTGCAGAAAAGAAGAGGCTCTGTTGGTTTATGACTCACATATTTGTATTAGGGAATTTTATCAAGAAGGAGAATCCAGAGGCAGAGTTCAAGGAAATCTCAAACATTTTAGGGGCAAAATGGAAGAAAGCTTATTTACGGATAACTTCTAAAGAGAAACGCAAGACCGAGGCGATGAAGCTGTTATTTCTTATGCTTTTAAAAGAGGAAGCTGAAAGAGGAAGCTGCTTTGATTACCTTCAATTCAAAGAGGAAGCTGAAAAGGAGAACAAGAAGAATGCTTTGTTCATGTTTTTCATCCTCTCAAACGAGAGGCGTGCATCTCTTTTTGCTGAGAACAAGGAACATCCTAGAGAGTGGAAGAACATGACTGAGGAGCAGGGAGGAGGTCCTTATGAAGGGTTATACAAGCAGAAAAAGGAGGAGGAAGCAGCTATCATTAAAAAAGAAGAGGAAGAGCAGATGAAGCTTCATAAACATGAAGCTTTGTTAAAACAAAGGACGAGCTCAAGAAGAAGGGAAGGGAAGAAGAATGTTGATCCTAACAAGCCCAAGAAGCCTGCATCCTCTTACATCTTATTCTGCAAAGAAGCAAGGAATAGTGTAATGGAGGAGAGAGACCAGGTCTGCAGAAGCAATGGAGTGGAGGGTTACAAAAAGGAAGTTATTAAAGCAAGTTGGGGGAAAGCTTGA

Coding sequence (CDS)

ATGGAGACGAAGATTACGCAGCCACCGGAAAAGGAGATCCTCCTTCAGAATTTATCTTCGGCTAAGAAATCGAAATCCAAAGCGGAAATGCAGGACATGCTTCAACGATTGAAGCTCGATGAGGAAAAGACGGAGGAGCTTTTGATAGCTAAAGACGAGATGCTTAAGCTGAAGGATGAAGAGATTAAAACGAGAGATCAACAACAGGAGATGCTCCAGATCGAATTGAAGAAGTTGCAGAAATTGAAGGAGTTCAAACCTAATATGATTGAACAAGATAAGACAGATAAGAAGAAGTGTGCAGAAAAGAAGAGGCTCTGTTGGTTTATGACTCACATATTTGTATTAGGGAATTTTATCAAGAAGGAGAATCCAGAGGCAGAGTTCAAGGAAATCTCAAACATTTTAGGGGCAAAATGGAAGAAAGCTTATTTACGGATAACTTCTAAAGAGAAACGCAAGACCGAGGCGATGAAGCTGTTATTTCTTATGCTTTTAAAAGAGGAAGCTGAAAGAGGAAGCTGCTTTGATTACCTTCAATTCAAAGAGGAAGCTGAAAAGGAGAACAAGAAGAATGCTTTGTTCATGTTTTTCATCCTCTCAAACGAGAGGCGTGCATCTCTTTTTGCTGAGAACAAGGAACATCCTAGAGAGTGGAAGAACATGACTGAGGAGCAGGGAGGAGGTCCTTATGAAGGGTTATACAAGCAGAAAAAGGAGGAGGAAGCAGCTATCATTAAAAAAGAAGAGGAAGAGCAGATGAAGCTTCATAAACATGAAGCTTTGTTAAAACAAAGGACGAGCTCAAGAAGAAGGGAAGGGAAGAAGAATGTTGATCCTAACAAGCCCAAGAAGCCTGCATCCTCTTACATCTTATTCTGCAAAGAAGCAAGGAATAGTGTAATGGAGGAGAGAGACCAGGTCTGCAGAAGCAATGGAGTGGAGGGTTACAAAAAGGAAGTTATTAAAGCAAGTTGGGGGAAAGCTTGA

Protein sequence

METKITQPPEKEILLQNLSSAKKSKSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNMIEQDKTDKKKCAEKKRLCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKWKKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFDYLQFKEEAEKENKKNALFMFFILSNERRASLFAENKEHPREWKNMTEEQGGGPYEGLYKQKKEEEAAIIKKEEEEQMKLHKHEALLKQRTSSRRREGKKNVDPNKPKKPASSYILFCKEARNSVMEERDQVCRSNGVEGYKKEVIKASWGKA

Homology

[Close]

BLAST of Sed0012262 vs. NCBI nr
Match: KAG7015152.1 (High mobility group B protein 13 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.8 bits (795), Expect = 1.4e-80
Identity = 224/406 (55.17%), Postives = 255/406 (62.81%), Query Frame = 0


Query: 1   METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEK 60
           M TK+TQP E+EILL QN SSAKK KSKA                EMQDMLQ+L+LD+EK
Sbjct: 36  MVTKVTQPSEEEILLSQNQSSAKKPKSKAAPKKQPAKQSFDKELQEMQDMLQQLRLDKEK 95

Query: 61  TEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQD 120
           TEELL AKDEMLK KDEE+KTRD +QE LQIELKKLQKLKEFKP M           EQ+
Sbjct: 96  TEELLKAKDEMLKQKDEELKTRDMEQEKLQIELKKLQKLKEFKPTMNFPMIQILKDKEQE 155

Query: 121 KTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW-------- 180
           K +KKKCAEKKR     + W         N IKKENPEAEFKEISNILGAKW        
Sbjct: 156 KKEKKKCAEKKRPSPPYILWCKDQ----WNEIKKENPEAEFKEISNILGAKWKNVTADEK 215

Query: 181 ----------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAE 240
                     K+AYL+ITSKEKR++EAMK     LL+EE ++ +  +    YLQFK EAE
Sbjct: 216 KPYEERYQAEKQAYLQITSKEKRESEAMK-----LLEEEQKQKTAMELLDQYLQFKGEAE 275

Query: 241 KENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG 300
           KENK           K+ +  FF+ SNERRASL AENK           EWKNMTE+Q  
Sbjct: 276 KENKKKKKEKDPLKPKHPMSAFFLFSNERRASLLAENKNVLEVAKITGEEWKNMTEKQ-R 335

Query: 301 GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL----------- 306
           GPYE               +YKQ+KEEEAAI+KKEEEEQMKLHKHEALL           
Sbjct: 336 GPYEEMARKNKEKYMQEMEIYKQQKEEEAAILKKEEEEQMKLHKHEALLLLKKKEKTETI 395

[Close]

BLAST of Sed0012262 vs. NCBI nr
Match: XP_022931308.1 (high mobility group B protein 6-like [Cucurbita moschata] >XP_022931309.1 high mobility group B protein 6-like [Cucurbita moschata])

HSP 1 Score: 307.8 bits (787), Expect = 1.2e-79
Identity = 222/406 (54.68%), Postives = 254/406 (62.56%), Query Frame = 0


Query: 1   METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEK 60
           M TK+TQP E+EILL QN SSAKK KSKA                EMQDMLQ+L+LD+EK
Sbjct: 36  MVTKVTQPSEEEILLSQNQSSAKKPKSKAAPKKQPAKQSFDKELQEMQDMLQQLRLDKEK 95

Query: 61  TEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQD 120
           TEELL AKDEMLK KDEE+KTRD +QE LQIELKKLQKLKEFKP M           EQ+
Sbjct: 96  TEELLKAKDEMLKQKDEELKTRDMEQEKLQIELKKLQKLKEFKPTMNFPMIQILKDKEQE 155

Query: 121 KTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW-------- 180
           K +KKKC+E KR     + W         N IKKENPEAEFKEISNILGAKW        
Sbjct: 156 KKEKKKCSENKRPSPPYILWCKDQ----WNEIKKENPEAEFKEISNILGAKWKNVTADEK 215

Query: 181 ----------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAE 240
                     K+AYL+ITSKEKR++EAMK     LL+EE ++ +  +    YLQFK EAE
Sbjct: 216 KPYEERYQAEKQAYLQITSKEKRESEAMK-----LLEEEQKQKTAMELLDQYLQFKGEAE 275

Query: 241 KENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG 300
           KENK           K+ +  FF+ SNERRASL AENK           EWKNMTE+Q  
Sbjct: 276 KENKKKKKEKDPLKPKHPMSAFFLFSNERRASLLAENKNVLEVAKITGEEWKNMTEKQ-R 335

Query: 301 GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL----------- 306
           GPYE               +YKQ+KEEEAAI+KKEEEEQMKLHKHEALL           
Sbjct: 336 GPYEEMARKNKEKYMQEMEIYKQQKEEEAAILKKEEEEQMKLHKHEALLLLKKKEKTETI 395

[Close]

BLAST of Sed0012262 vs. NCBI nr
Match: XP_022985391.1 (high mobility group B protein 6-like [Cucurbita maxima] >XP_022985393.1 high mobility group B protein 6-like [Cucurbita maxima])

HSP 1 Score: 306.6 bits (784), Expect = 2.6e-79
Identity = 222/406 (54.68%), Postives = 254/406 (62.56%), Query Frame = 0


Query: 1   METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEK 60
           M TK+TQP E+EILL QN SSAKKSKSKA                EMQ+MLQ+++LD+EK
Sbjct: 36  MVTKVTQPSEEEILLSQNQSSAKKSKSKAAPKKQPAKQSFDKELQEMQEMLQQMRLDKEK 95

Query: 61  TEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQD 120
           TEELL AKDEMLK KDEE+KTRD +QE LQIELKKLQKLKEFKP M           EQ 
Sbjct: 96  TEELLKAKDEMLKQKDEELKTRDVEQEKLQIELKKLQKLKEFKPIMNFPMIQILKDKEQK 155

Query: 121 KTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW-------- 180
           K +KKKCAEKKR     + W         N IKKENPEAEFKEISNILGAKW        
Sbjct: 156 KKEKKKCAEKKRPSPPYILWCKDQ----WNEIKKENPEAEFKEISNILGAKWKNVTADEK 215

Query: 181 ----------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAE 240
                     K+AYL++TSKEKR++EAMK     LL+EE ++ +  +    YLQFK EAE
Sbjct: 216 KPYEERYQAEKQAYLQVTSKEKRESEAMK-----LLEEEQKQKTAMELLDQYLQFKGEAE 275

Query: 241 KENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG 300
           KENK           K+ +  FF+ SNERRASL AENK           EWKNMTEEQ  
Sbjct: 276 KENKKKKKEKDPLKPKHPMSAFFLFSNERRASLLAENKNVLEVAKITGEEWKNMTEEQ-R 335

Query: 301 GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL----------- 306
           GPYE               +YK +KEEEAAI+KKEEEEQMKLHKHEALL           
Sbjct: 336 GPYEEMARKNKEKYMQEMEIYKHQKEEEAAILKKEEEEQMKLHKHEALLLLKKKEKTETI 395

[Close]

BLAST of Sed0012262 vs. NCBI nr
Match: XP_008451961.1 (PREDICTED: high mobility group B protein 6 [Cucumis melo])

HSP 1 Score: 304.7 bits (779), Expect = 9.8e-79
Identity = 221/411 (53.77%), Postives = 249/411 (60.58%), Query Frame = 0


Query: 1   METKITQPPEKEILLQNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKT 60
           M TK+T P E EIL QN SSAKK KSKA                EMQDMLQ+LKLD+EKT
Sbjct: 44  MVTKVTTPSEGEILSQNQSSAKKPKSKAAAKKQPAKQSFDKDLQEMQDMLQQLKLDKEKT 103

Query: 61  EELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQDK 120
           EELL  KDEMLK KDEE+KTRD++QE LQIELKKLQKLKEFKP M           EQDK
Sbjct: 104 EELLKEKDEMLKQKDEELKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQILKDKEQDK 163

Query: 121 TDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW--------- 180
            +KKKCAEKKR     + W         N IKKENPEA+FKE SNILGAKW         
Sbjct: 164 KEKKKCAEKKRPAQPYILWCKDQ----WNEIKKENPEADFKETSNILGAKWKTIPAEEKK 223

Query: 181 ---------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEK 240
                    K+ YLRITS+EKR++EAMK     LL+EE ++ +  +    YLQFKEEAEK
Sbjct: 224 PYEEKYQAEKETYLRITSREKRESEAMK-----LLEEEQKQKTAMELLEQYLQFKEEAEK 283

Query: 241 ENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGG 300
           ENK           K  +  FF+ SNERRASL AENK           EWKNMTEEQ  G
Sbjct: 284 ENKKKKKEKDPLKPKQPMSAFFLFSNERRASLVAENKNIVELAKIAGEEWKNMTEEQ-KG 343

Query: 301 PYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL------------ 312
           PYE               +YKQKKEEEAAI+KKEEEEQMK+ KHEALL            
Sbjct: 344 PYEEMAKKNKEKYMQEMEIYKQKKEEEAAILKKEEEEQMKVQKHEALLLLKKKEKTETII 403

[Close]

BLAST of Sed0012262 vs. NCBI nr
Match: XP_023551962.1 (high mobility group B protein 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.9 bits (777), Expect = 1.7e-78
Identity = 220/406 (54.19%), Postives = 253/406 (62.32%), Query Frame = 0


Query: 1   METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEK 60
           M TK+TQP E+EI+L +N SSAKK KSKA                EMQDMLQ+L+LD+EK
Sbjct: 36  MVTKVTQPSEEEIVLSRNQSSAKKPKSKAAPKKQPAKQSFDKELQEMQDMLQQLRLDKEK 95

Query: 61  TEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQD 120
           TEELL AKDEMLK KDEE+KTRD +QE LQIE KKLQKLKEFKP M           EQ+
Sbjct: 96  TEELLKAKDEMLKQKDEELKTRDMEQEKLQIEFKKLQKLKEFKPTMNFPMIQILKDKEQE 155

Query: 121 KTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW-------- 180
           K +KKKCAEKKR     + W         N IKKENPEAEFKEISNILGAKW        
Sbjct: 156 KKEKKKCAEKKRPSPPYILWCKDQ----WNEIKKENPEAEFKEISNILGAKWKNVTADEK 215

Query: 181 ----------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAE 240
                     K+AYL+ITSKEKR++EAMK     LL+EE ++ +  +    YLQFK EAE
Sbjct: 216 KPYEERYQAEKQAYLQITSKEKRESEAMK-----LLEEEQKQKTAMELLDQYLQFKGEAE 275

Query: 241 KENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG 300
           KENK           K+ +  FF+ SNERRASL AENK           EWKNMTE+Q  
Sbjct: 276 KENKKKKKEKDPLKPKHPMSAFFLFSNERRASLLAENKNVLEVAKITGEEWKNMTEKQ-R 335

Query: 301 GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL----------- 306
           GPYE               +YKQ+KEEEAAI+KKEEEE MKLHKHEALL           
Sbjct: 336 GPYEEMARKNKEKYMQEMEMYKQQKEEEAAILKKEEEELMKLHKHEALLLLKKKEKTETI 395

[Close]

BLAST of Sed0012262 vs. ExPASy Swiss-Prot
Match: Q9SUP7 (High mobility group B protein 6 OS=Arabidopsis thaliana OX=3702 GN=HMGB6 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.9e-49
Identity = 152/389 (39.07%), Postives = 219/389 (56.30%), Query Frame = 0


Query: 2   ETKITQPPEKEILLQNLSSAKKSKSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEE 61
           + ++ + P   + ++  S+    +   EMQ ML+++K++++KTEELL  KDE+L+ K+EE
Sbjct: 23  KNELVETPPSPVSVKGKSAKSFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEE 82

Query: 62  IKTRDQQQEMLQIELKKLQKLKEFKPNM-----------IEQDKTDKKK---CAEKKR-- 121
           ++TRD +QE L++ELKKLQK+KEFKPNM            EQ+K +KKK   C E KR  
Sbjct: 83  LETRDAEQEKLKVELKKLQKMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPS 142

Query: 122 ---LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAY 181
              + W           +KKENPEA+FKE SNILGAKW                  K+AY
Sbjct: 143 SSYVLWCKDQ----WTEVKKENPEADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAY 202

Query: 182 LRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK---------- 241
           L++ +KEKR+ EAMK     LL+++ ++ +  +    YL F +EAE++NK          
Sbjct: 203 LQVIAKEKREKEAMK-----LLEDDQKQRTAMELLDQYLNFVQEAEQDNKKKNKKEKDPL 262

Query: 242 --KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL------- 301
             K+ +  F + +NERRA+L  ENK           EWKN+++++   PYE +       
Sbjct: 263 KPKHPVSAFLVYANERRAALREENKSVVEVAKITGEEWKNLSDKK-KAPYEKVAKKNKET 322

Query: 302 -------YKQKKEEEAAIIKKEEEEQMKLHKHEAL-----------LKQRTSSRRREGKK 306
                  YK+ KEEEA   KKEEEE +KLHK EAL           L ++  + +++  +
Sbjct: 323 YLQAMEEYKRTKEEEALSQKKEEEELLKLHKQEALQMLKKKEKTDNLIKKEKATKKKKNE 382

[Close]

BLAST of Sed0012262 vs. ExPASy Swiss-Prot
Match: Q9T012 (High mobility group B protein 13 OS=Arabidopsis thaliana OX=3702 GN=HMGB13 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.6e-47
Identity = 154/373 (41.29%), Postives = 205/373 (54.96%), Query Frame = 0


Query: 25  KSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKE 84
           K   EMQ ML+++K+++EKTE+LL  KDE+L+ K+ E       QE L+ ELKKLQK+KE
Sbjct: 45  KDLMEMQAMLEKMKIEKEKTEDLLKEKDEILRKKEVE-------QEKLKTELKKLQKMKE 104

Query: 85  FKPNM----------IEQDKTDKKK---CAEKKR-----LCWFMTHIFVLGNFIKKENPE 144
           FKPNM           E++K  KKK   CAE KR     + W   +     N +KK+NPE
Sbjct: 105 FKPNMTFAFSQSLAQTEEEKKGKKKKKDCAETKRPSTPYILWCKDN----WNEVKKQNPE 164

Query: 145 AEFKEISNILGAKW------------------KKAYLRITSKEKRKTEAMKLLFLMLLKE 204
           A+FKE SNILGAKW                  K+AYL++ +KEKR+ EAMK     LL +
Sbjct: 165 ADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAYLQVITKEKREREAMK-----LLDD 224

Query: 205 EAERGSCFD----YLQFKEEAEKENKKNA------------LFMFFILSNERRASLFAEN 264
           E ++ +  +    YL F +EAE +NKK A            +  + I +NERRA+L  EN
Sbjct: 225 EQKQKTAMELLDQYLHFVQEAEHDNKKKAKKIKDPLKPKQPISAYLIYANERRAALKGEN 284

Query: 265 KE-------HPREWKNMTEEQGGGPYEGL--------------YKQKKEEEAAIIKKEEE 312
           K           EWKN++EE+   PY+ +              YK+ KEEEA   KKEEE
Sbjct: 285 KSVIEVAKMAGEEWKNLSEEK-KAPYDQMAKKNKEIYLQEMEGYKRTKEEEAMSQKKEEE 344

[Close]

BLAST of Sed0012262 vs. ExPASy TrEMBL
Match: A0A6J1ETX2 (high mobility group B protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111437530 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 5.6e-80
Identity = 222/406 (54.68%), Postives = 254/406 (62.56%), Query Frame = 0


Query: 1   METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEK 60
           M TK+TQP E+EILL QN SSAKK KSKA                EMQDMLQ+L+LD+EK
Sbjct: 36  MVTKVTQPSEEEILLSQNQSSAKKPKSKAAPKKQPAKQSFDKELQEMQDMLQQLRLDKEK 95

Query: 61  TEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQD 120
           TEELL AKDEMLK KDEE+KTRD +QE LQIELKKLQKLKEFKP M           EQ+
Sbjct: 96  TEELLKAKDEMLKQKDEELKTRDMEQEKLQIELKKLQKLKEFKPTMNFPMIQILKDKEQE 155

Query: 121 KTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW-------- 180
           K +KKKC+E KR     + W         N IKKENPEAEFKEISNILGAKW        
Sbjct: 156 KKEKKKCSENKRPSPPYILWCKDQ----WNEIKKENPEAEFKEISNILGAKWKNVTADEK 215

Query: 181 ----------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAE 240
                     K+AYL+ITSKEKR++EAMK     LL+EE ++ +  +    YLQFK EAE
Sbjct: 216 KPYEERYQAEKQAYLQITSKEKRESEAMK-----LLEEEQKQKTAMELLDQYLQFKGEAE 275

Query: 241 KENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG 300
           KENK           K+ +  FF+ SNERRASL AENK           EWKNMTE+Q  
Sbjct: 276 KENKKKKKEKDPLKPKHPMSAFFLFSNERRASLLAENKNVLEVAKITGEEWKNMTEKQ-R 335

Query: 301 GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL----------- 306
           GPYE               +YKQ+KEEEAAI+KKEEEEQMKLHKHEALL           
Sbjct: 336 GPYEEMARKNKEKYMQEMEIYKQQKEEEAAILKKEEEEQMKLHKHEALLLLKKKEKTETI 395

[Close]

BLAST of Sed0012262 vs. ExPASy TrEMBL
Match: A0A6J1J813 (high mobility group B protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111483412 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 222/406 (54.68%), Postives = 254/406 (62.56%), Query Frame = 0


Query: 1   METKITQPPEKEILL-QNLSSAKKSKSKA----------------EMQDMLQRLKLDEEK 60
           M TK+TQP E+EILL QN SSAKKSKSKA                EMQ+MLQ+++LD+EK
Sbjct: 36  MVTKVTQPSEEEILLSQNQSSAKKSKSKAAPKKQPAKQSFDKELQEMQEMLQQMRLDKEK 95

Query: 61  TEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQD 120
           TEELL AKDEMLK KDEE+KTRD +QE LQIELKKLQKLKEFKP M           EQ 
Sbjct: 96  TEELLKAKDEMLKQKDEELKTRDVEQEKLQIELKKLQKLKEFKPIMNFPMIQILKDKEQK 155

Query: 121 KTDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW-------- 180
           K +KKKCAEKKR     + W         N IKKENPEAEFKEISNILGAKW        
Sbjct: 156 KKEKKKCAEKKRPSPPYILWCKDQ----WNEIKKENPEAEFKEISNILGAKWKNVTADEK 215

Query: 181 ----------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAE 240
                     K+AYL++TSKEKR++EAMK     LL+EE ++ +  +    YLQFK EAE
Sbjct: 216 KPYEERYQAEKQAYLQVTSKEKRESEAMK-----LLEEEQKQKTAMELLDQYLQFKGEAE 275

Query: 241 KENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGG 300
           KENK           K+ +  FF+ SNERRASL AENK           EWKNMTEEQ  
Sbjct: 276 KENKKKKKEKDPLKPKHPMSAFFLFSNERRASLLAENKNVLEVAKITGEEWKNMTEEQ-R 335

Query: 301 GPYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL----------- 306
           GPYE               +YK +KEEEAAI+KKEEEEQMKLHKHEALL           
Sbjct: 336 GPYEEMARKNKEKYMQEMEIYKHQKEEEAAILKKEEEEQMKLHKHEALLLLKKKEKTETI 395

[Close]

BLAST of Sed0012262 vs. ExPASy TrEMBL
Match: A0A1S3BS50 (high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103493110 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 4.7e-79
Identity = 221/411 (53.77%), Postives = 249/411 (60.58%), Query Frame = 0


Query: 1   METKITQPPEKEILLQNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKT 60
           M TK+T P E EIL QN SSAKK KSKA                EMQDMLQ+LKLD+EKT
Sbjct: 44  MVTKVTTPSEGEILSQNQSSAKKPKSKAAAKKQPAKQSFDKDLQEMQDMLQQLKLDKEKT 103

Query: 61  EELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQDK 120
           EELL  KDEMLK KDEE+KTRD++QE LQIELKKLQKLKEFKP M           EQDK
Sbjct: 104 EELLKEKDEMLKQKDEELKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQILKDKEQDK 163

Query: 121 TDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW--------- 180
            +KKKCAEKKR     + W         N IKKENPEA+FKE SNILGAKW         
Sbjct: 164 KEKKKCAEKKRPAQPYILWCKDQ----WNEIKKENPEADFKETSNILGAKWKTIPAEEKK 223

Query: 181 ---------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEK 240
                    K+ YLRITS+EKR++EAMK     LL+EE ++ +  +    YLQFKEEAEK
Sbjct: 224 PYEEKYQAEKETYLRITSREKRESEAMK-----LLEEEQKQKTAMELLEQYLQFKEEAEK 283

Query: 241 ENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGG 300
           ENK           K  +  FF+ SNERRASL AENK           EWKNMTEEQ  G
Sbjct: 284 ENKKKKKEKDPLKPKQPMSAFFLFSNERRASLVAENKNIVELAKIAGEEWKNMTEEQ-KG 343

Query: 301 PYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL------------ 312
           PYE               +YKQKKEEEAAI+KKEEEEQMK+ KHEALL            
Sbjct: 344 PYEEMAKKNKEKYMQEMEIYKQKKEEEAAILKKEEEEQMKVQKHEALLLLKKKEKTETII 403

[Close]

BLAST of Sed0012262 vs. ExPASy TrEMBL
Match: A0A0A0KZT4 (Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_4G051430 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 6.9e-78
Identity = 226/447 (50.56%), Postives = 256/447 (57.27%), Query Frame = 0


Query: 1   METKITQPPEKEILLQNLSSAKKSKSKA----------------EMQDMLQRLKLDEEKT 60
           M  K+T P E EIL QN +SAKK KSKA                EMQDMLQ+LKLD+EKT
Sbjct: 44  MVPKVTAPSEGEILSQNQTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKT 103

Query: 61  EELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQDK 120
           EELL  KDEMLK KDEE+KTRD++QE LQIELKKLQKLKEFKP M           EQDK
Sbjct: 104 EELLKEKDEMLKQKDEELKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDK 163

Query: 121 TDKKKCAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW--------- 180
            +KKKCAEKKR     + W         N IKKENPEA+FKE SNILGAKW         
Sbjct: 164 KEKKKCAEKKRPAPPYILWCKDQ----WNEIKKENPEADFKETSNILGAKWKTISAEEKK 223

Query: 181 ---------KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEK 240
                    K+ YLRITSKEKR++EAMK     LL+EE ++ +  +    YLQFKEEAEK
Sbjct: 224 PYEEKYQAEKETYLRITSKEKRESEAMK-----LLEEEQKQKTAMELLEQYLQFKEEAEK 283

Query: 241 ENK-----------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGG 300
           ENK           K  +  FF+ SNERRASL AENK           EWKNMTEEQ  G
Sbjct: 284 ENKKKKKEKDPLKPKQPMSAFFLFSNERRASLVAENKNVVELAKIAGEEWKNMTEEQ-KG 343

Query: 301 PYE--------------GLYKQKKEEEAAIIKKEEEEQMKLHKHEALL------------ 322
           PYE               +Y+QKKEEEAAI+KKEEEEQMK+ KHEALL            
Sbjct: 344 PYEEMAKKNKEKYMQEMEIYEQKKEEEAAILKKEEEEQMKVQKHEALLLLKKKEKTETII 403

[Close]

BLAST of Sed0012262 vs. ExPASy TrEMBL
Match: A0A6J1FQ69 (high mobility group B protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111447782 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 2.0e-77
Identity = 216/406 (53.20%), Postives = 248/406 (61.08%), Query Frame = 0


Query: 1   METKITQPPEKEILLQNLSSAKKSKSK-----------AEMQDMLQRLKLDEEKTEELLI 60
           M TK+TQP E+E L QN    K ++ K            EMQDMLQ+L+LD+EKTEELL 
Sbjct: 42  MVTKVTQPSEEENLSQNQPKPKAAQKKQPAKQSFDKDLQEMQDMLQQLRLDKEKTEELLK 101

Query: 61  AKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKEFKPNM----------IEQDKTDKKK 120
            KDEMLK KDEE+KTRD++QE LQIELKKLQKLKEFKPNM           EQ+K +KKK
Sbjct: 102 EKDEMLKQKDEELKTRDKEQEKLQIELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKK 161

Query: 121 CAEKKR-----LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW-------------- 180
           C+EKKR     + W         N IKKENPEAEFKEISNILGAKW              
Sbjct: 162 CSEKKRPSPPYILWCKDQ----WNEIKKENPEAEFKEISNILGAKWKSVTAEEKKPYEER 221

Query: 181 ----KKAYLRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK-- 240
               K+AYL+ITSKEKR+TEAMK     LL+EE ++ +  +    YLQFKEEAEK+NK  
Sbjct: 222 YQAEKEAYLQITSKEKRETEAMK-----LLEEEQKQKTAMELLDQYLQFKEEAEKDNKKK 281

Query: 241 ---------KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL 300
                    K  +  FF+ SNERR SLFAENK           EWKNMTEEQ  GPYE +
Sbjct: 282 KKERDPLKPKQPMSAFFLFSNERRGSLFAENKNVLEVAKITGGEWKNMTEEQ-RGPYEEM 341

Query: 301 --------------YKQKKEEEAAIIKKEEEEQMKLHKHEALL---------------KQ 312
                         YKQKKEEEAA +KKEEEEQMKL KHEALL               K+
Sbjct: 342 AKKKKEKYMQEMETYKQKKEEEAANLKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKE 401

[Close]

BLAST of Sed0012262 vs. TAIR 10
Match: AT4G23800.2 (HMG (high mobility group) box protein )

HSP 1 Score: 198.4 bits (503), Expect = 9.2e-51
Identity = 153/383 (39.95%), Postives = 220/383 (57.44%), Query Frame = 0


Query: 2   ETKITQPPEKEILLQNLSSAKKSKSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEE 61
           + ++ + P   + ++  S+    +   EMQ ML+++K++++KTEELL  KDE+L+ K+EE
Sbjct: 23  KNELVETPPSPVSVKGKSAKSFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEE 82

Query: 62  IKTRDQQQEMLQIELKKLQKLKEFKPNM-----------IEQDKTDKKK---CAEKKR-- 121
           ++TRD +QE L++ELKKLQK+KEFKPNM            EQ+K +KKK   C E KR  
Sbjct: 83  LETRDAEQEKLKVELKKLQKMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPS 142

Query: 122 ---LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAY 181
              + W           +KKENPEA+FKE SNILGAKW                  K+AY
Sbjct: 143 SSYVLWCKDQ----WTEVKKENPEADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAY 202

Query: 182 LRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK---------- 241
           L++ +KEKR+ EAMK     LL+++ ++ +  +    YL F +EAE++NK          
Sbjct: 203 LQVIAKEKREKEAMK-----LLEDDQKQRTAMELLDQYLNFVQEAEQDNKKKNKKEKDPL 262

Query: 242 --KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL------- 301
             K+ +  F + +NERRA+L  ENK           EWKN+++++   PYE +       
Sbjct: 263 KPKHPVSAFLVYANERRAALREENKSVVEVAKITGEEWKNLSDKK-KAPYEKVAKKNKET 322

Query: 302 -------YKQKKEEEAAIIKKEEEEQMKLHKHEAL----LKQRTSSR-RREGKKNVDPNK 306
                  YK+ KEEEA   KKEEEE +KLHK EAL     K++T +  +++  +NVDPNK
Sbjct: 323 YLQAMEEYKRTKEEEALSQKKEEEELLKLHKQEALQMLKKKEKTDNLIKKKKNENVDPNK 382

[Close]

BLAST of Sed0012262 vs. TAIR 10
Match: AT4G23800.1 (HMG (high mobility group) box protein )

HSP 1 Score: 197.2 bits (500), Expect = 2.1e-50
Identity = 152/389 (39.07%), Postives = 219/389 (56.30%), Query Frame = 0


Query: 2   ETKITQPPEKEILLQNLSSAKKSKSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEE 61
           + ++ + P   + ++  S+    +   EMQ ML+++K++++KTEELL  KDE+L+ K+EE
Sbjct: 23  KNELVETPPSPVSVKGKSAKSFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEE 82

Query: 62  IKTRDQQQEMLQIELKKLQKLKEFKPNM-----------IEQDKTDKKK---CAEKKR-- 121
           ++TRD +QE L++ELKKLQK+KEFKPNM            EQ+K +KKK   C E KR  
Sbjct: 83  LETRDAEQEKLKVELKKLQKMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPS 142

Query: 122 ---LCWFMTHIFVLGNFIKKENPEAEFKEISNILGAKW------------------KKAY 181
              + W           +KKENPEA+FKE SNILGAKW                  K+AY
Sbjct: 143 SSYVLWCKDQ----WTEVKKENPEADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAY 202

Query: 182 LRITSKEKRKTEAMKLLFLMLLKEEAERGSCFD----YLQFKEEAEKENK---------- 241
           L++ +KEKR+ EAMK     LL+++ ++ +  +    YL F +EAE++NK          
Sbjct: 203 LQVIAKEKREKEAMK-----LLEDDQKQRTAMELLDQYLNFVQEAEQDNKKKNKKEKDPL 262

Query: 242 --KNALFMFFILSNERRASLFAENKE-------HPREWKNMTEEQGGGPYEGL------- 301
             K+ +  F + +NERRA+L  ENK           EWKN+++++   PYE +       
Sbjct: 263 KPKHPVSAFLVYANERRAALREENKSVVEVAKITGEEWKNLSDKK-KAPYEKVAKKNKET 322

Query: 302 -------YKQKKEEEAAIIKKEEEEQMKLHKHEAL-----------LKQRTSSRRREGKK 306
                  YK+ KEEEA   KKEEEE +KLHK EAL           L ++  + +++  +
Sbjct: 323 YLQAMEEYKRTKEEEALSQKKEEEELLKLHKQEALQMLKKKEKTDNLIKKEKATKKKKNE 382

[Close]

BLAST of Sed0012262 vs. TAIR 10
Match: AT4G11080.1 (HMG (high mobility group) box protein )

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-48
Identity = 154/373 (41.29%), Postives = 205/373 (54.96%), Query Frame = 0


Query: 25  KSKAEMQDMLQRLKLDEEKTEELLIAKDEMLKLKDEEIKTRDQQQEMLQIELKKLQKLKE 84
           K   EMQ ML+++K+++EKTE+LL  KDE+L+ K+ E       QE L+ ELKKLQK+KE
Sbjct: 45  KDLMEMQAMLEKMKIEKEKTEDLLKEKDEILRKKEVE-------QEKLKTELKKLQKMKE 104

Query: 85  FKPNM----------IEQDKTDKKK---CAEKKR-----LCWFMTHIFVLGNFIKKENPE 144
           FKPNM           E++K  KKK   CAE KR     + W   +     N +KK+NPE
Sbjct: 105 FKPNMTFAFSQSLAQTEEEKKGKKKKKDCAETKRPSTPYILWCKDN----WNEVKKQNPE 164

Query: 145 AEFKEISNILGAKW------------------KKAYLRITSKEKRKTEAMKLLFLMLLKE 204
           A+FKE SNILGAKW                  K+AYL++ +KEKR+ EAMK     LL +
Sbjct: 165 ADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAYLQVITKEKREREAMK-----LLDD 224

Query: 205 EAERGSCFD----YLQFKEEAEKENKKNA------------LFMFFILSNERRASLFAEN 264
           E ++ +  +    YL F +EAE +NKK A            +  + I +NERRA+L  EN
Sbjct: 225 EQKQKTAMELLDQYLHFVQEAEHDNKKKAKKIKDPLKPKQPISAYLIYANERRAALKGEN 284

Query: 265 KE-------HPREWKNMTEEQGGGPYEGL--------------YKQKKEEEAAIIKKEEE 312
           K           EWKN++EE+   PY+ +              YK+ KEEEA   KKEEE
Sbjct: 285 KSVIEVAKMAGEEWKNLSEEK-KAPYDQMAKKNKEIYLQEMEGYKRTKEEEAMSQKKEEE 344

The following BLAST results are available for this feature:

BLAST of Sed0012262 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015152.1	1.4e-80	55.17	High mobility group B protein 13 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022931308.1	1.2e-79	54.68	high mobility group B protein 6-like [Cucurbita moschata] >XP_022931309.1 high m...	[more]
XP_022985391.1	2.6e-79	54.68	high mobility group B protein 6-like [Cucurbita maxima] >XP_022985393.1 high mob...	[more]
XP_008451961.1	9.8e-79	53.77	PREDICTED: high mobility group B protein 6 [Cucumis melo]	[more]
XP_023551962.1	1.7e-78	54.19	high mobility group B protein 6-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0012262 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUP7	2.9e-49	39.07	High mobility group B protein 6 OS=Arabidopsis thaliana OX=3702 GN=HMGB6 PE=2 SV...	[more]
Q9T012	1.6e-47	41.29	High mobility group B protein 13 OS=Arabidopsis thaliana OX=3702 GN=HMGB13 PE=2 ...	[more]

BLAST of Sed0012262 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ETX2	5.6e-80	54.68	high mobility group B protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC1114375...	[more]
A0A6J1J813	1.2e-79	54.68	high mobility group B protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111483412...	[more]
A0A1S3BS50	4.7e-79	53.77	high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103493110 PE=4 SV=...	[more]
A0A0A0KZT4	6.9e-78	50.56	Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_4G051430 PE=4 SV=1	[more]
A0A6J1FQ69	2.0e-77	53.20	high mobility group B protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC1114477...	[more]

BLAST of Sed0012262 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23800.2	9.2e-51	39.95	HMG (high mobility group) box protein	[more]
AT4G23800.1	2.1e-50	39.07	HMG (high mobility group) box protein	[more]
AT4G11080.1	1.1e-48	41.29	HMG (high mobility group) box protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 231..251
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..286
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 118..159 e-value: 5.7E-5 score: 25.4
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 266..324 e-value: 3.9E-7 score: 32.3
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 270..307
IPR044601	3xHMG-box protein HMGB6/HMGB13	PANTHER	PTHR46912	HIGH MOBILITY GROUP B PROTEIN 13	coord: 21..311

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012262.1	Sed0012262.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding