Sed0012261 (gene) Chayote v1

Overview


Name	Sed0012261
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pectin lyase-like superfamily protein
Location	LG04: 45950308 .. 45953716 (-)
RNA-Seq Expression	Sed0012261
Synteny	Sed0012261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTCAGAAACCATCTCAAGATCAGCCACTTTCATCATCTTGTGCTTATGGGGCCTCATCTCAAATGTCCAAGCTGATGATTTTCTTGTCAAAAAATTTGGAGCACGAGGAGATGGAAAATCAGACGATACTCAGGTTTGTTAATTTGTTACAAAAAGAAGAAATTATTTTTTACAAAAATTATTTGATGTAAATGCCACAATATGTAATTGATAAAAAAGGGTCTTTCTAAAATTGGTCTTTCCTGACCAGAAAACTCATAAAAAAATTAATTTCTAGATAAAGGTGGTCACTATGAAGATTGAACCCATTACATTGTGCACTTCAAGACCTTCTTTGACCGACCTAGATAGGTGGTGTTCTTACAATGCCACCATCATTAAATTTAATCAAATAATTTTGTCTTATTAGTAAAGACCAAACCTACATGAATAAATGTTACATTTATTCAAGTTCTTATAATTTTGTCACTTGGGTGATGCCTCTCTAGTAAGACAAACCTGTTTGACCAAATTTTGACGAGGGTGTGTTTCCTTGGTAAAGATGCCACCATTCTTTTTAGCAAATAGTTTTTTTTAAAAAAAATCCATTTTCTAAAAAAGACACTTTTTTTTTTTTTTTATATTTCTCTCTATTGGAAGGGAGTGGTAACCATCAATGGATATACAAGAGAGAAATTAAACTAAAAGAGTGTAGTTTGATCATAAATGTATTCATTGATTAGAAGGAGGTAGCTACATTGTAACATTACGTCGAACAACTTTCCGTGGTTCGGGGGACTAAAAGTCGATGATTTAATGGGGGTTTTGTTTTGTTATAGGCCATCATGAAGGCTTGGCATGCAGCTTGCAAGTCAACAAAGGCAAGCAAAGTATTGATACCAAAAGGAACATATGTGGTGGATTCTATCAAGTTATTAGGGCCATGCAATGCGCCCATCCATTTTCGAATGGAGGGCATAATGGAAGCGCCGCTCCATGCTCATAGCATGAAAATTGATCATAGTTGGGTCGTTTTTCAATATATTAATGGCTTCACTCTTTCGGGTGGCGGCACTTTTGATGGCCAAGGAGCACATACTTGGAATAAAAGTGATTGTCCTTCTAAAGGCAAATGCAGCGCTATTCCTATCGTGAGTCGGTTTTTTCATGGTTTTTTTTTTCTATTTCGGTTTCTAAACTTTCAAAATGTCTTCTTTTTCGTATATGTTTAGTGTATGTTGATTTTGAATTTTGTCCTCGTGGGTCTTTAAAATCATTTAAAGGGCGTCTTAGTTATTAAAAATTGAATCTTTGAAATATCATTTATTGTTGTGTGTGTAATCCTCTTGGAACACTTTTTTTTTCTTTCAAAATATTGTTTTCAACGTGTTTTCTATCACTTTTTAGTAAAACATTTTCTTCCAAACGTACGCACTAACATTGAACCATATATTGTGGTTGGTCGCGAAGTTTTTTTATGTGTTACTTTTTTTTAAATATATAAATGGCACATTTAAATAATATTTTTAATATTGGTGTCCCCTGAATGTTGGATTTTGTAAAAAAAAAAAAAGTATATAAATATAAATTTTATCTATATTTTAATATTATTTATGTCCAAATGAAATGTGTTCTCTATAAATTTTAGAAGTAGAATGAGTGCCATTATGAAAAGTTCTGTTAGGTTAAACATAAGAATATTGTTAAAATTTGTTCTGTTATGTTAAACATAAGAAAATTGTTAAAATAGAAATTTTGAAAATTGAGGACAAAAAAAAGGAACATTTATAAAATTGCTTGTTTTTTTTTTGGAAACTAAAAAGTGGGGTTTTTATGTCAAAAGAGCTTGAGATTCCACAACCTCAACAACTCTGTAATCGAAGACATAACTTCAACAGACAGCAAGTTCTTCCACATCAATGTGCTCAACTGCAGGAACGTGACCCTTCAAAAAATCAACATCAACGCCCCGGACGAGAGTCCAAACACAGATGGAATCCACATTGGTCGATCGAGCGGGGTAAACATAAGAGACACTACAATCAAAACCGGGGACGATTGTATTTCGATCGGGGATGGAAGCCAACAGATAAACATAGAGAAAGTGACATGCGGACCGGGGCACGGGATCAGCATTGGAAGCCTTGGGCTGTACAAAAATGAGCAGCCTGTGTCTGGAATCTTTGTCAAAGATTGCACACTCTCAAACACTGAGTATGGAGTTAGAGTGAAATCATGGCCAGATTCTACAAAAGCCATTGCAACCAATATGCAATTTGAAGGCATTGTCATGAACAATGTTGTTACTCCTATCCTAATTGACCAACAATATTGCCCATATGGCAAGTGCAACCACAAGGTATTTTCTATCAATCCACTACCCTAAAAATAATTCATAGAAAAATGAATAATTTTAACCTACACAAATTAAGGTGGAAATATTGTCCCCACTTAAAAAAAATGCCTTTAAAACGACCATTTGTCATGGGACAAACCGTTGGCATTACAATATTTGAATGTCAAAAAAACTCGTAGAAAATTAAAAACTAAATAGAGGACCACCATAAATTGAACTCATCACCCCAAAACTCTCTTTGACTACTTGAGTCACTTCATGATGGTTACACGATATTCTTTCTTTGGAGTGTTAATGATGACAACTCTTGACAATATGATATTGTCAAAAGTTTCGACATAACCTTCATGCTTTGGTTTTTTTTTTCTCCTTATATACTTATAATATTCTCCTTATTTAACCAAATATAAAAATACTTTATTTATATCCCAAGAATTCACCCCTCATGCAAAGCACCAGTGAACCTCTCCTTGGACTCCTCTTCTATATATGTAGAGTACCTTATGATCCAATCCTTCATTTGAACAAAAAATAGAGTCTTCACTTAAATAGTTAATTTCTCTAGCTTACACCACATATTTGCCATAATTATGTCTTTAGACTTTTCGTCCTAAAAGGGGGGATTCTATCAACATGGCCGACTATGACTTGGGCAAGATTCAAACTTAGAATCTCTTGCTCTGATACCATGTTGGATTGTGTTAAATCGTCAATCAACTAAAAAGCTTAAGCTAATGGGTTGGGGGATAAATGCAATTATATCAACCAACATTTGGTTTAGTATGAGTAATTGGGATTTTGATATTGATATGAACATATTATATAGGTTGGATCTAGAGTTGAAATTAGCAATGTGGGGTTCAAGAACATAAGAGGGACATCTAGAGCTCAAGTTGCAATGAAGCTTGTGTGCAGCAAAGCCTATCCATGCAAGAATGTGAAGCTATCAAACATTAACTTGAAGTACACTGGCAAAAATGGCACTGCCATATCTGAATGTTCCTATGTCAAGCCTGCAATTGCTGGAAATGTGGTGCCACCAGCCTGCACTAGGGCATATACAATCTGA

mRNA sequence

ATGTATTCAGAAACCATCTCAAGATCAGCCACTTTCATCATCTTGTGCTTATGGGGCCTCATCTCAAATGTCCAAGCTGATGATTTTCTTGTCAAAAAATTTGGAGCACGAGGAGATGGAAAATCAGACGATACTCAGGCCATCATGAAGGCTTGGCATGCAGCTTGCAAGTCAACAAAGGCAAGCAAAGTATTGATACCAAAAGGAACATATGTGGTGGATTCTATCAAGTTATTAGGGCCATGCAATGCGCCCATCCATTTTCGAATGGAGGGCATAATGGAAGCGCCGCTCCATGCTCATAGCATGAAAATTGATCATAGTTGGGTCGTTTTTCAATATATTAATGGCTTCACTCTTTCGGGTGGCGGCACTTTTGATGGCCAAGGAGCACATACTTGGAATAAAAGTGATTGTCCTTCTAAAGGCAAATGCAGCGCTATTCCTATCAGCTTGAGATTCCACAACCTCAACAACTCTGTAATCGAAGACATAACTTCAACAGACAGCAAGTTCTTCCACATCAATGTGCTCAACTGCAGGAACGTGACCCTTCAAAAAATCAACATCAACGCCCCGGACGAGAGTCCAAACACAGATGGAATCCACATTGGTCGATCGAGCGGGGTAAACATAAGAGACACTACAATCAAAACCGGGGACGATTGTATTTCGATCGGGGATGGAAGCCAACAGATAAACATAGAGAAAGTGACATGCGGACCGGGGCACGGGATCAGCATTGGAAGCCTTGGGCTGTACAAAAATGAGCAGCCTGTGTCTGGAATCTTTGTCAAAGATTGCACACTCTCAAACACTGAGTATGGAGTTAGAGTGAAATCATGGCCAGATTCTACAAAAGCCATTGCAACCAATATGCAATTTGAAGGCATTGTCATGAACAATGTTGTTACTCCTATCCTAATTGACCAACAATATTGCCCATATGGCAAGTGCAACCACAAGCCTGCAATTGCTGGAAATGTGGTGCCACCAGCCTGCACTAGGGCATATACAATCTGA

Coding sequence (CDS)

ATGTATTCAGAAACCATCTCAAGATCAGCCACTTTCATCATCTTGTGCTTATGGGGCCTCATCTCAAATGTCCAAGCTGATGATTTTCTTGTCAAAAAATTTGGAGCACGAGGAGATGGAAAATCAGACGATACTCAGGCCATCATGAAGGCTTGGCATGCAGCTTGCAAGTCAACAAAGGCAAGCAAAGTATTGATACCAAAAGGAACATATGTGGTGGATTCTATCAAGTTATTAGGGCCATGCAATGCGCCCATCCATTTTCGAATGGAGGGCATAATGGAAGCGCCGCTCCATGCTCATAGCATGAAAATTGATCATAGTTGGGTCGTTTTTCAATATATTAATGGCTTCACTCTTTCGGGTGGCGGCACTTTTGATGGCCAAGGAGCACATACTTGGAATAAAAGTGATTGTCCTTCTAAAGGCAAATGCAGCGCTATTCCTATCAGCTTGAGATTCCACAACCTCAACAACTCTGTAATCGAAGACATAACTTCAACAGACAGCAAGTTCTTCCACATCAATGTGCTCAACTGCAGGAACGTGACCCTTCAAAAAATCAACATCAACGCCCCGGACGAGAGTCCAAACACAGATGGAATCCACATTGGTCGATCGAGCGGGGTAAACATAAGAGACACTACAATCAAAACCGGGGACGATTGTATTTCGATCGGGGATGGAAGCCAACAGATAAACATAGAGAAAGTGACATGCGGACCGGGGCACGGGATCAGCATTGGAAGCCTTGGGCTGTACAAAAATGAGCAGCCTGTGTCTGGAATCTTTGTCAAAGATTGCACACTCTCAAACACTGAGTATGGAGTTAGAGTGAAATCATGGCCAGATTCTACAAAAGCCATTGCAACCAATATGCAATTTGAAGGCATTGTCATGAACAATGTTGTTACTCCTATCCTAATTGACCAACAATATTGCCCATATGGCAAGTGCAACCACAAGCCTGCAATTGCTGGAAATGTGGTGCCACCAGCCTGCACTAGGGCATATACAATCTGA

Protein sequence

MYSETISRSATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKSTKASKVLIPKGTYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFTLSGGGTFDGQGAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLNCRNVTLQKININAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVTCGPGHGISIGSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGIVMNNVVTPILIDQQYCPYGKCNHKPAIAGNVVPPACTRAYTI

Homology

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BLAST of Sed0012261 vs. NCBI nr
Match: XP_038888575.1 (exopolygalacturonase clone GBGA483-like [Benincasa hispida])

HSP 1 Score: 486.5 bits (1251), Expect = 1.9e-133
Identity = 241/400 (60.25%), Postives = 283/400 (70.75%), Query Frame = 0


Query: 1   MYSETISRSATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKSTK 60
           M S TISRS T I     GLI+N QA DF VK++GAR +G SDD+QAIMKAW  AC STK
Sbjct: 1   MSSPTISRSTTVIFFFFLGLITNAQAADFHVKRYGARANGNSDDSQAIMKAWKDACMSTK 60

Query: 61  ASKVLIPKGTYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFTL 120
            SKV+IP G YVVDS+K  GPC APIH ++EG ++AP +   M+ D +W+ FQYING TL
Sbjct: 61  PSKVVIPGGRYVVDSMKFQGPCMAPIHVQVEGRLQAPTNIKKMRSDDTWIAFQYINGLTL 120

Query: 121 SGGGTFDGQGAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLNC 180
           SG GTFDG+G+  W +++C S GKCS++PISLRF +LNNS+I+DITSTDSKFFH+NV NC
Sbjct: 121 SGSGTFDGRGSLAWKQNECASSGKCSSLPISLRFFSLNNSLIKDITSTDSKFFHMNVHNC 180

Query: 181 RNVTLQKININAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVTC 240
           RNVTLQ INI+AP +SPNTDGIHIG SSGV IR+  IKTGDDC+SIGDGSQQIN+EKVTC
Sbjct: 181 RNVTLQNINIDAPGDSPNTDGIHIGGSSGVTIRNARIKTGDDCVSIGDGSQQINVEKVTC 240

Query: 241 GPGHGISIGSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGIVM 300
           GPGHGISIGSLG YKNE+PVSG+ V++CT+SNT +GVR+K+WPDSTK IATNMQFEGIVM
Sbjct: 241 GPGHGISIGSLGKYKNEKPVSGVTVRNCTISNTMFGVRIKTWPDSTKGIATNMQFEGIVM 300

Query: 301 NNVVTPILIDQQYCPYGKCNH--------------------------------------- 339
           NNV TPILIDQQYCPYG C H                                       
Sbjct: 301 NNVGTPILIDQQYCPYGLCKHQIPSRVKISNVGFKNIRGTSTAQVALKLVCSRGYPCKNV 360

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BLAST of Sed0012261 vs. NCBI nr
Match: XP_004144612.1 (exopolygalacturonase clone GBGA483 [Cucumis sativus] >KGN43473.2 hypothetical protein Csa_020393 [Cucumis sativus])

HSP 1 Score: 482.6 bits (1241), Expect = 2.7e-132
Identity = 240/400 (60.00%), Postives = 282/400 (70.50%), Query Frame = 0


Query: 1   MYSETISRSATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKSTK 60
           M S TISRS TFI+    GLI+N QA DF VK++GAR +G SDD+QAIMKAW  AC STK
Sbjct: 1   MSSSTISRSTTFILFLFIGLITNAQAADFHVKRYGARANGNSDDSQAIMKAWKDACSSTK 60

Query: 61  ASKVLIPKGTYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFTL 120
            SK++IP G YVVDS+K  GPC APIH ++EG ++AP +   M+ D SW+VFQYING TL
Sbjct: 61  PSKIVIPGGRYVVDSMKFQGPCLAPIHVQVEGRLQAPTNIKKMRNDASWIVFQYINGLTL 120

Query: 121 SGGGTFDGQGAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLNC 180
           SG GTFDG+G+  W ++ C S GKC ++PISLRF++LNNS+I+DITSTDSKFFH+NV NC
Sbjct: 121 SGKGTFDGRGSLAWKQNQCASSGKCGSLPISLRFYSLNNSLIKDITSTDSKFFHVNVHNC 180

Query: 181 RNVTLQKININAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVTC 240
           RN+TLQ INI+AP +SPNTDGIHIG SSGV I +  IKTGDDC+SIGDGSQQI +EKVTC
Sbjct: 181 RNLTLQNINIDAPGDSPNTDGIHIGGSSGVTIHNARIKTGDDCVSIGDGSQQIKVEKVTC 240

Query: 241 GPGHGISIGSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGIVM 300
           GPGHGISIGSLG YKNE+PVSGI V+DCT++NT +GVR+KSWP STK IA+NMQFE IVM
Sbjct: 241 GPGHGISIGSLGKYKNEKPVSGITVRDCTITNTMFGVRIKSWPASTKGIASNMQFESIVM 300

Query: 301 NNVVTPILIDQQYCPYGKCNH--------------------------------------- 339
           NNV TPILIDQQYCPYG CN                                        
Sbjct: 301 NNVGTPILIDQQYCPYGTCNRQIPSRVQISNVGFKNIRGTSTTQVAVKLVCSRGYPCKNV 360

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BLAST of Sed0012261 vs. NCBI nr
Match: KAA0059180.1 (exopolygalacturonase [Cucumis melo var. makuwa] >TYK19339.1 exopolygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 476.9 bits (1226), Expect = 1.5e-130
Identity = 238/401 (59.35%), Postives = 282/401 (70.32%), Query Frame = 0


Query: 1   MYSETI-SRSATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKST 60
           M S TI SRS TFI+    GLI+NVQA DF VK++GAR +G SDD+QAIMKAW  AC ST
Sbjct: 1   MSSSTIFSRSTTFILFLFIGLITNVQAVDFHVKRYGARANGNSDDSQAIMKAWKDACSST 60

Query: 61  KASKVLIPKGTYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFT 120
           K SK++IP G YVVDS+K  GPC APIH ++EG ++AP +   M+ D SW+VFQYING T
Sbjct: 61  KPSKIVIPGGRYVVDSMKFQGPCLAPIHVQVEGRLQAPTNIKKMRNDASWIVFQYINGLT 120

Query: 121 LSGGGTFDGQGAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLN 180
           +SG GTFDG+G+  W ++ C S GKC ++PISLRF +LNNS+I+DITSTDSKFFH+NV N
Sbjct: 121 VSGKGTFDGRGSLAWKQNQCASSGKCGSLPISLRFFSLNNSLIKDITSTDSKFFHMNVHN 180

Query: 181 CRNVTLQKININAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVT 240
           CRNVTLQ INI+AP +SPNTDGIHIG SSG+ I D  IKTGDDC+SIGDGSQQIN+EKVT
Sbjct: 181 CRNVTLQNINIDAPGDSPNTDGIHIGGSSGITIHDARIKTGDDCVSIGDGSQQINVEKVT 240

Query: 241 CGPGHGISIGSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGIV 300
           CGPGHGISIGSLG YKNE+PVSGI V+DCT++NT +GVR+K+WP STK IA+NMQFE IV
Sbjct: 241 CGPGHGISIGSLGKYKNEKPVSGITVRDCTITNTMFGVRIKTWPASTKGIASNMQFENIV 300

Query: 301 MNNVVTPILIDQQYCPYGKCNH-------------------------------------- 339
           M+NV TPILIDQQYCPYG C+H                                      
Sbjct: 301 MDNVGTPILIDQQYCPYGTCHHQVPSRVQISDVGFKNIRGTSTTQVAVKLVCSRGYPCKN 360

[Close]

BLAST of Sed0012261 vs. NCBI nr
Match: XP_008462107.1 (PREDICTED: exopolygalacturonase clone GBGA483 [Cucumis melo])

HSP 1 Score: 475.3 bits (1222), Expect = 4.3e-130
Identity = 237/401 (59.10%), Postives = 282/401 (70.32%), Query Frame = 0


Query: 1   MYSETI-SRSATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKST 60
           M S TI SRS TFI+    GLI+NVQA DF VK++GAR +G SDD+QAIMKAW  AC ST
Sbjct: 1   MSSSTIFSRSTTFILFLFIGLITNVQAVDFHVKRYGARANGNSDDSQAIMKAWKDACSST 60

Query: 61  KASKVLIPKGTYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFT 120
           K SK++IP G YVVDS+K  GPC APIH ++EG ++AP +   M+ D SW+VFQYING T
Sbjct: 61  KPSKIVIPGGRYVVDSMKFQGPCLAPIHVQVEGRLQAPTNIKKMRNDASWIVFQYINGLT 120

Query: 121 LSGGGTFDGQGAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLN 180
           +SG GTFDG+G+  W ++ C S GKC ++PISLRF +LNNS+I+DITSTDSKFFH+NV N
Sbjct: 121 VSGKGTFDGRGSLAWKQNQCASSGKCGSLPISLRFFSLNNSLIKDITSTDSKFFHMNVHN 180

Query: 181 CRNVTLQKININAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVT 240
           CRNVTL+ INI+AP +SPNTDGIHIG SSG+ I D  IKTGDDC+SIGDGSQQIN+EKVT
Sbjct: 181 CRNVTLRNINIDAPGDSPNTDGIHIGGSSGITIHDARIKTGDDCVSIGDGSQQINVEKVT 240

Query: 241 CGPGHGISIGSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGIV 300
           CGPGHGISIGSLG YKNE+PVSGI V+DCT++NT +GVR+K+WP STK IA+NMQFE IV
Sbjct: 241 CGPGHGISIGSLGKYKNEKPVSGITVRDCTITNTMFGVRIKTWPASTKGIASNMQFENIV 300

Query: 301 MNNVVTPILIDQQYCPYGKCNH-------------------------------------- 339
           M+NV TPILIDQQYCPYG C+H                                      
Sbjct: 301 MDNVGTPILIDQQYCPYGTCHHQVPSRVQISDVGFKNIRGTSTTQVAVKLVCSRGYPCKN 360

[Close]

BLAST of Sed0012261 vs. NCBI nr
Match: XP_022136051.1 (exopolygalacturonase clone GBGA483-like [Momordica charantia])

HSP 1 Score: 456.4 bits (1173), Expect = 2.1e-124
Identity = 221/324 (68.21%), Postives = 263/324 (81.17%), Query Frame = 0


Query: 1   MYSETISR-SATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKST 60
           M S+TI R SA FI+     LI+N QA DF VK++GAR +G SDD+QAIMKAW  AC S 
Sbjct: 1   MSSKTIPRSSARFILFFFLSLITNGQAVDFHVKRYGARANGNSDDSQAIMKAWKEACMSP 60

Query: 61  KASKVLIPKGTYVVDSIKLLGPCNAP-IHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGF 120
           K SKVLIP G Y+V S+   GPC AP I+  +EG ++AP    SMK   SW+VF+YING 
Sbjct: 61  KPSKVLIPGGKYMVGSMSFEGPCMAPSINVHVEGTLQAPASIQSMKSQDSWIVFKYINGL 120

Query: 121 TLSGGGTFDGQGAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVL 180
           TLSG GTFDG+G+  W ++ C S GKCS++PISLRF +LNN++I DITSTDSKFFH+NV+
Sbjct: 121 TLSGSGTFDGRGSIAWKQNQCASSGKCSSLPISLRFTSLNNTLIRDITSTDSKFFHMNVI 180

Query: 181 NCRNVTLQKININAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKV 240
           NCRN+TLQ IN++AP +S NTDGIHIGRS GVNI +T I+TGDDC+SIGDGSQ+IN+EKV
Sbjct: 181 NCRNLTLQNINVDAPGDSLNTDGIHIGRSIGVNIINTRIETGDDCVSIGDGSQKINVEKV 240

Query: 241 TCGPGHGISIGSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGI 300
           TCGPGHGISIGSLG Y+NEQPVSGI VK+CT+SNT +GVR+K+WP STK IATNMQF+GI
Sbjct: 241 TCGPGHGISIGSLGKYENEQPVSGITVKNCTISNTMFGVRIKTWPASTKGIATNMQFDGI 300

Query: 301 VMNNVVTPILIDQQYCPYGKCNHK 323
           VMNNV TPILIDQQYCPYG C HK
Sbjct: 301 VMNNVGTPILIDQQYCPYGVCKHK 324

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BLAST of Sed0012261 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.0e-93
Identity = 160/309 (51.78%), Postives = 221/309 (71.52%), Query Frame = 0


Query: 12  FIILCLWGLISNVQADDF-LVKKFGARGDGKSDDTQAIMKAWHAACKSTKASKVLIPKGT 71
           F++L L+   S VQ+D F +V KFGA+ DGK+D ++  + AW  AC S   S V+IPKGT
Sbjct: 12  FVLLLLFISASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGT 71

Query: 72  YVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFTLSGGGTFDGQG 131
           Y++  + L GPC API   ++G ++AP    + K D +WV F  +  F + GGG FDGQG
Sbjct: 72  YLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFK-DPNWVRFYSVENFKMFGGGIFDGQG 131

Query: 132 AHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLNCRNVTLQKINI 191
           +  + K+ C ++   S +P+++RF  L N++I+DITS DSK FHINV  C+N+TL+++ I
Sbjct: 132 SIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKI 191

Query: 192 NAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVTCGPGHGISIGS 251
            APDESPNTDGIH+G+S GVNI  + IKTGDDCISIGDG++ + I+++TCGPGHGISIGS
Sbjct: 192 EAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGS 251

Query: 252 LGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGIVMNNVVTPILID 311
           LG ++NE+PV GI + +CT++NT  G R+K+WP       + + FE I MNNV +PILID
Sbjct: 252 LGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILID 311

Query: 312 QQYCPYGKC 320
           QQYCP+ KC
Sbjct: 312 QQYCPWNKC 319

[Close]

BLAST of Sed0012261 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 7.5e-93
Identity = 159/309 (51.46%), Postives = 220/309 (71.20%), Query Frame = 0


Query: 12  FIILCLWGLISNVQADDF-LVKKFGARGDGKSDDTQAIMKAWHAACKSTKASKVLIPKGT 71
           F++L L+   S VQ D F +V KFGA+ DGK+D ++  + AW  AC S   S V+IPKGT
Sbjct: 12  FVLLLLFISASKVQPDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGT 71

Query: 72  YVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFTLSGGGTFDGQG 131
           Y++  + L GPC API   ++G ++AP    + K D +WV F  +  F + GGG FDGQG
Sbjct: 72  YLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFK-DPNWVRFYSVENFKMFGGGIFDGQG 131

Query: 132 AHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLNCRNVTLQKINI 191
           +  + K+ C ++   S +P+++RF  + N++I+DITS DSK FHINV  C+N+TL+++ I
Sbjct: 132 SIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKI 191

Query: 192 NAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVTCGPGHGISIGS 251
            APDESPNTDGIH+G+S GVNI  + IKTGDDCISIGDG++ + I+++TCGPGHGISIGS
Sbjct: 192 EAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGS 251

Query: 252 LGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGIVMNNVVTPILID 311
           LG ++NE+PV GI + +CT++NT  G R+K+WP       + + FE I MNNV +PILID
Sbjct: 252 LGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILID 311

Query: 312 QQYCPYGKC 320
           QQYCP+ KC
Sbjct: 312 QQYCPWNKC 319

[Close]

BLAST of Sed0012261 vs. ExPASy Swiss-Prot
Match: P49063 (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 334.3 bits (856), Expect = 1.6e-90
Identity = 154/290 (53.10%), Postives = 202/290 (69.66%), Query Frame = 0


Query: 31  VKKFGARGDGKSDDTQAIMKAWHAACKSTKASKVLIPKGTYVVDSIKLLGPCNAPIHFRM 90
           VK  GA+GD K+DD+ A   AW  AC +   S + +PKG Y+V+S++  GPC  P+   +
Sbjct: 72  VKASGAKGDSKTDDSAAFAAAWKEACAA--GSTITVPKGEYMVESLEFKGPCKGPVTLEL 131

Query: 91  EGIMEAPLHAHSMKIDHSWVVFQYINGFTLSGG-GTFDGQGAHTWNKSDCPSKGKCSAIP 150
            G  +AP    + K    W+ F+ I  FTL+G    FDGQG+  W  +DC   GKC+++P
Sbjct: 132 NGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLP 191

Query: 151 ISLRFHNLNNSVIEDITSTDSKFFHINVLNCRNVTLQKININAPDESPNTDGIHIGRSSG 210
           I++RF  L NS I  ITST+SK FH+N+LNC+N+TL  I I+AP ES NTDGIHIGRS+G
Sbjct: 192 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNG 251

Query: 211 VNIRDTTIKTGDDCISIGDGSQQINIEKVTCGPGHGISIGSLGLYKNEQPVSGIFVKDCT 270
           VN+    IKTGDDC+SIGDG++ + +E V CGPGHGISIGSLG Y NEQPV G+ V+ C 
Sbjct: 252 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 311

Query: 271 LSNTEYGVRVKSWPDSTKAIATNMQFEGIVMNNVVTPILIDQQYCPYGKC 320
           + NT+ GVR+K+WP S   IA+N+ FE I M+NV  P+LIDQ+YCPYG C
Sbjct: 312 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHC 359

[Close]

BLAST of Sed0012261 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.2e-84
Identity = 151/295 (51.19%), Postives = 198/295 (67.12%), Query Frame = 0


Query: 29  FLVKKFGARGDGKSDDTQAIMKAWHAACKSTKASKVLIPKGTYVVDSIKLLGPC-NAPIH 88
           F V  +GA+G G  D +QA+MKAW AAC S   S VLIPKG Y +  + + GPC  + I 
Sbjct: 10  FNVNDYGAKGAG--DISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSKIG 69

Query: 89  FRMEGIMEAPLHAHSMKIDHSWVVFQYINGFTLSGGGTFDGQGAHTWNKSDCPSKGKCSA 148
           F+++G+++AP      K D  WV F  I+G T+SG GT DGQG   W K++C     C  
Sbjct: 70  FQIDGVVKAPADPSKFKSD-GWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKH 129

Query: 149 IPISLRFHNLNNSVIEDITSTDSKFFHINVLNCRNVTLQKININAPDESPNTDGIHIGRS 208
             ++LRF  L ++++ DITS +SK FHINVL C ++T Q + + AP  S NTDGIH+G S
Sbjct: 130 AAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGIS 189

Query: 209 SGVNIRDTTIKTGDDCISIGDGSQQINIEKVTCGPGHGISIGSLGLYKNEQPVSGIFVKD 268
            GV I +T I TGDDCISIG GSQ + I +V CGPGHGISIGSLG Y NE+ V GI VK 
Sbjct: 190 KGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKG 249

Query: 269 CTLSNTEYGVRVKSWPDSTKAIATNMQFEGIVMNNVVTPILIDQQYCPYGKCNHK 323
           CT S T  GVRVK+WP+S    AT++ F+ + MNNV  P+++DQ+YCPYG+C+ +
Sbjct: 250 CTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQ 301

[Close]

BLAST of Sed0012261 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.0e-82
Identity = 141/278 (50.72%), Postives = 192/278 (69.06%), Query Frame = 0


Query: 43  DDTQAIMKAWHAACKSTKASKVLIPKGTYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHS 102
           D TQA+  AW  AC S   S +L+PKG + V  I L GPC + I  +++G ++AP     
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSK 60

Query: 103 MKIDHSWVVFQYINGFTLSGGGTFDGQGAHTWNKSDCPSKGK-CSAIPISLRFHNLNNSV 162
           +K    W+    I+  T+ GGG FDGQG   W ++DC   G  C  + ++LR + + NS+
Sbjct: 61  IK-GLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSI 120

Query: 163 IEDITSTDSKFFHINVLNCRNVTLQKININAPDESPNTDGIHIGRSSGVNIRDTTIKTGD 222
           + D+T+ DSK FH+NV+ C+N+T ++  I+A + S NTDGIHIGRS GVNI +T IKTGD
Sbjct: 121 LRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGD 180

Query: 223 DCISIGDGSQQINIEKVTCGPGHGISIGSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKS 282
           DCIS+GDGS+ INI  +TCGPGHGIS+GSLG YKNE+ V GI+VK+CT++ ++ GVR+K+
Sbjct: 181 DCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKT 240

Query: 283 WPDSTKAIATNMQFEGIVMNNVVTPILIDQQYCPYGKC 320
           WP S    A+ M F+ I MN+V TPILIDQ YCPY +C
Sbjct: 241 WPKSEPGEASEMHFQDITMNSVGTPILIDQGYCPYNQC 277

[Close]

BLAST of Sed0012261 vs. ExPASy TrEMBL
Match: A0A0A0K6I9 (Polygalacturonase OS=Cucumis sativus OX=3659 GN=Csa_7G033440 PE=3 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.3e-140
Identity = 239/338 (70.71%), Postives = 282/338 (83.43%), Query Frame = 0


Query: 1   MYSETISRSATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKSTK 60
           M S TISRS TFI+    GLI+N QA DF VK++GAR +G SDD+QAIMKAW  AC STK
Sbjct: 1   MSSSTISRSTTFILFLFIGLITNAQAADFHVKRYGARANGNSDDSQAIMKAWKDACSSTK 60

Query: 61  ASKVLIPKGTYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFTL 120
            SK++IP G YVVDS+K  GPC APIH ++EG ++AP +   M+ D SW+VFQYING TL
Sbjct: 61  PSKIVIPGGRYVVDSMKFQGPCLAPIHVQVEGRLQAPTNIKKMRNDASWIVFQYINGLTL 120

Query: 121 SGGGTFDGQGAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLNC 180
           SG GTFDG+G+  W ++ C S GKC ++PISLRF++LNNS+I+DITSTDSKFFH+NV NC
Sbjct: 121 SGKGTFDGRGSLAWKQNQCASSGKCGSLPISLRFYSLNNSLIKDITSTDSKFFHVNVHNC 180

Query: 181 RNVTLQKININAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVTC 240
           RN+TLQ INI+AP +SPNTDGIHIG SSGV I +  IKTGDDC+SIGDGSQQI +EKVTC
Sbjct: 181 RNLTLQNINIDAPGDSPNTDGIHIGGSSGVTIHNARIKTGDDCVSIGDGSQQIKVEKVTC 240

Query: 241 GPGHGISIGSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGIVM 300
           GPGHGISIGSLG YKNE+PVSGI V+DCT++NT +GVR+KSWP STK IA+NMQFE IVM
Sbjct: 241 GPGHGISIGSLGKYKNEKPVSGITVRDCTITNTMFGVRIKSWPASTKGIASNMQFESIVM 300

Query: 301 NNVVTPILIDQQYCPYGKCNHKPAIAGNVVPPACTRAY 339
           NNV TPILIDQQYCPYG CN +PAIAG+VVPPACTRA+
Sbjct: 301 NNVGTPILIDQQYCPYGTCNRQPAIAGSVVPPACTRAF 338

[Close]

BLAST of Sed0012261 vs. ExPASy TrEMBL
Match: A0A5A7UVQ4 (Exopolygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00600 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 7.2e-131
Identity = 238/401 (59.35%), Postives = 282/401 (70.32%), Query Frame = 0


Query: 1   MYSETI-SRSATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKST 60
           M S TI SRS TFI+    GLI+NVQA DF VK++GAR +G SDD+QAIMKAW  AC ST
Sbjct: 1   MSSSTIFSRSTTFILFLFIGLITNVQAVDFHVKRYGARANGNSDDSQAIMKAWKDACSST 60

Query: 61  KASKVLIPKGTYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFT 120
           K SK++IP G YVVDS+K  GPC APIH ++EG ++AP +   M+ D SW+VFQYING T
Sbjct: 61  KPSKIVIPGGRYVVDSMKFQGPCLAPIHVQVEGRLQAPTNIKKMRNDASWIVFQYINGLT 120

Query: 121 LSGGGTFDGQGAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLN 180
           +SG GTFDG+G+  W ++ C S GKC ++PISLRF +LNNS+I+DITSTDSKFFH+NV N
Sbjct: 121 VSGKGTFDGRGSLAWKQNQCASSGKCGSLPISLRFFSLNNSLIKDITSTDSKFFHMNVHN 180

Query: 181 CRNVTLQKININAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVT 240
           CRNVTLQ INI+AP +SPNTDGIHIG SSG+ I D  IKTGDDC+SIGDGSQQIN+EKVT
Sbjct: 181 CRNVTLQNINIDAPGDSPNTDGIHIGGSSGITIHDARIKTGDDCVSIGDGSQQINVEKVT 240

Query: 241 CGPGHGISIGSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGIV 300
           CGPGHGISIGSLG YKNE+PVSGI V+DCT++NT +GVR+K+WP STK IA+NMQFE IV
Sbjct: 241 CGPGHGISIGSLGKYKNEKPVSGITVRDCTITNTMFGVRIKTWPASTKGIASNMQFENIV 300

Query: 301 MNNVVTPILIDQQYCPYGKCNH-------------------------------------- 339
           M+NV TPILIDQQYCPYG C+H                                      
Sbjct: 301 MDNVGTPILIDQQYCPYGTCHHQVPSRVQISDVGFKNIRGTSTTQVAVKLVCSRGYPCKN 360

[Close]

BLAST of Sed0012261 vs. ExPASy TrEMBL
Match: A0A1S3CG85 (exopolygalacturonase clone GBGA483 OS=Cucumis melo OX=3656 GN=LOC103500536 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 2.1e-130
Identity = 237/401 (59.10%), Postives = 282/401 (70.32%), Query Frame = 0


Query: 1   MYSETI-SRSATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKST 60
           M S TI SRS TFI+    GLI+NVQA DF VK++GAR +G SDD+QAIMKAW  AC ST
Sbjct: 1   MSSSTIFSRSTTFILFLFIGLITNVQAVDFHVKRYGARANGNSDDSQAIMKAWKDACSST 60

Query: 61  KASKVLIPKGTYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFT 120
           K SK++IP G YVVDS+K  GPC APIH ++EG ++AP +   M+ D SW+VFQYING T
Sbjct: 61  KPSKIVIPGGRYVVDSMKFQGPCLAPIHVQVEGRLQAPTNIKKMRNDASWIVFQYINGLT 120

Query: 121 LSGGGTFDGQGAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLN 180
           +SG GTFDG+G+  W ++ C S GKC ++PISLRF +LNNS+I+DITSTDSKFFH+NV N
Sbjct: 121 VSGKGTFDGRGSLAWKQNQCASSGKCGSLPISLRFFSLNNSLIKDITSTDSKFFHMNVHN 180

Query: 181 CRNVTLQKININAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVT 240
           CRNVTL+ INI+AP +SPNTDGIHIG SSG+ I D  IKTGDDC+SIGDGSQQIN+EKVT
Sbjct: 181 CRNVTLRNINIDAPGDSPNTDGIHIGGSSGITIHDARIKTGDDCVSIGDGSQQINVEKVT 240

Query: 241 CGPGHGISIGSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGIV 300
           CGPGHGISIGSLG YKNE+PVSGI V+DCT++NT +GVR+K+WP STK IA+NMQFE IV
Sbjct: 241 CGPGHGISIGSLGKYKNEKPVSGITVRDCTITNTMFGVRIKTWPASTKGIASNMQFENIV 300

Query: 301 MNNVVTPILIDQQYCPYGKCNH-------------------------------------- 339
           M+NV TPILIDQQYCPYG C+H                                      
Sbjct: 301 MDNVGTPILIDQQYCPYGTCHHQVPSRVQISDVGFKNIRGTSTTQVAVKLVCSRGYPCKN 360

[Close]

BLAST of Sed0012261 vs. ExPASy TrEMBL
Match: A0A6J1C2F3 (exopolygalacturonase clone GBGA483-like OS=Momordica charantia OX=3673 GN=LOC111007839 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 1.0e-124
Identity = 221/324 (68.21%), Postives = 263/324 (81.17%), Query Frame = 0


Query: 1   MYSETISR-SATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKST 60
           M S+TI R SA FI+     LI+N QA DF VK++GAR +G SDD+QAIMKAW  AC S 
Sbjct: 1   MSSKTIPRSSARFILFFFLSLITNGQAVDFHVKRYGARANGNSDDSQAIMKAWKEACMSP 60

Query: 61  KASKVLIPKGTYVVDSIKLLGPCNAP-IHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGF 120
           K SKVLIP G Y+V S+   GPC AP I+  +EG ++AP    SMK   SW+VF+YING 
Sbjct: 61  KPSKVLIPGGKYMVGSMSFEGPCMAPSINVHVEGTLQAPASIQSMKSQDSWIVFKYINGL 120

Query: 121 TLSGGGTFDGQGAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVL 180
           TLSG GTFDG+G+  W ++ C S GKCS++PISLRF +LNN++I DITSTDSKFFH+NV+
Sbjct: 121 TLSGSGTFDGRGSIAWKQNQCASSGKCSSLPISLRFTSLNNTLIRDITSTDSKFFHMNVI 180

Query: 181 NCRNVTLQKININAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKV 240
           NCRN+TLQ IN++AP +S NTDGIHIGRS GVNI +T I+TGDDC+SIGDGSQ+IN+EKV
Sbjct: 181 NCRNLTLQNINVDAPGDSLNTDGIHIGRSIGVNIINTRIETGDDCVSIGDGSQKINVEKV 240

Query: 241 TCGPGHGISIGSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGI 300
           TCGPGHGISIGSLG Y+NEQPVSGI VK+CT+SNT +GVR+K+WP STK IATNMQF+GI
Sbjct: 241 TCGPGHGISIGSLGKYENEQPVSGITVKNCTISNTMFGVRIKTWPASTKGIATNMQFDGI 300

Query: 301 VMNNVVTPILIDQQYCPYGKCNHK 323
           VMNNV TPILIDQQYCPYG C HK
Sbjct: 301 VMNNVGTPILIDQQYCPYGVCKHK 324

[Close]

BLAST of Sed0012261 vs. ExPASy TrEMBL
Match: A0A6J1HVG8 (exopolygalacturonase clone GBGA483-like OS=Cucurbita maxima OX=3661 GN=LOC111468211 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 5.5e-123
Identity = 213/322 (66.15%), Postives = 257/322 (79.81%), Query Frame = 0


Query: 1   MYSETISRSATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKSTK 60
           M S TISRS+TFII     LI+N  A DF VK++GA+ +G SDD+QAIM+AW  AC S K
Sbjct: 1   MSSLTISRSSTFIIFFFLCLITNGLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRK 60

Query: 61  ASKVLIPKGTYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFTL 120
           ASKV+I  G YVV+S+K  GPC APIH +MEG +EAPL+   MK D +W++F+YIN  T+
Sbjct: 61  ASKVVISGGRYVVNSMKFKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTI 120

Query: 121 SGGGTFDGQGAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLNC 180
           SG G FDG+G+  W ++ C S GKC ++PISLRF+ LNN++I  ITSTDSKFFH+N+ NC
Sbjct: 121 SGKGIFDGRGSLAWKQNQCASSGKCDSLPISLRFYRLNNTIIRGITSTDSKFFHMNLHNC 180

Query: 181 RNVTLQKININAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVTC 240
           RN+TLQ I INAP  SPNTDGIHIG SSGV I +  I+TGDDC+SIGDGSQQI IEKVTC
Sbjct: 181 RNMTLQNIIINAPGVSPNTDGIHIGGSSGVTISNARIETGDDCVSIGDGSQQITIEKVTC 240

Query: 241 GPGHGISIGSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKAIATNMQFEGIVM 300
           GPGHGISIGSLG YKNE+PVSG+ V++CT+ NT +GVR+K+WPDST+ IATNM F+ IVM
Sbjct: 241 GPGHGISIGSLGKYKNEKPVSGVIVRNCTIKNTMFGVRIKTWPDSTQGIATNMHFDSIVM 300

Query: 301 NNVVTPILIDQQYCPYGKCNHK 323
           NNV TPILIDQQYCPYGKC  K
Sbjct: 301 NNVGTPILIDQQYCPYGKCRFK 322

[Close]

BLAST of Sed0012261 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 335.5 bits (859), Expect = 5.0e-92
Identity = 154/290 (53.10%), Postives = 203/290 (70.00%), Query Frame = 0


Query: 31  VKKFGARGDGKSDDTQAIMKAWHAACKSTKASKVLIPKGTYVVDSIKLLGPCNAPIHFRM 90
           VK  GA+GDGK+DD+ A   AW  AC +   S + +PKG Y+V+S++  GPC  P+   +
Sbjct: 73  VKASGAKGDGKTDDSAAFAAAWKEACAA--GSTITVPKGEYLVESLEFKGPCKGPVTLEL 132

Query: 91  EGIMEAPLHAHSMKIDHSWVVFQYINGFTLSGG-GTFDGQGAHTWNKSDCPSKGKCSAIP 150
            G  +AP    + K    W+ F+ +  FTL+G    FDGQG+  W  +DC   GKC+++P
Sbjct: 133 NGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLP 192

Query: 151 ISLRFHNLNNSVIEDITSTDSKFFHINVLNCRNVTLQKININAPDESPNTDGIHIGRSSG 210
           I++RF  L NS I  ITST+SK FH+N+LNC+N+TL  I I+AP ES NTDGIHIGRS+G
Sbjct: 193 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNG 252

Query: 211 VNIRDTTIKTGDDCISIGDGSQQINIEKVTCGPGHGISIGSLGLYKNEQPVSGIFVKDCT 270
           VN+    IKTGDDC+SIGDG++ + +E V CGPGHGISIGSLG Y NEQPV G+ V+ C 
Sbjct: 253 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 312

Query: 271 LSNTEYGVRVKSWPDSTKAIATNMQFEGIVMNNVVTPILIDQQYCPYGKC 320
           + NT+ GVR+K+WP S   IA+N+ FE I M+NV  P+LIDQ+YCPYG C
Sbjct: 313 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHC 360

[Close]

BLAST of Sed0012261 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 334.3 bits (856), Expect = 1.1e-91
Identity = 154/290 (53.10%), Postives = 202/290 (69.66%), Query Frame = 0


Query: 31  VKKFGARGDGKSDDTQAIMKAWHAACKSTKASKVLIPKGTYVVDSIKLLGPCNAPIHFRM 90
           VK  GA+GD K+DD+ A   AW  AC +   S + +PKG Y+V+S++  GPC  P+   +
Sbjct: 72  VKASGAKGDSKTDDSAAFAAAWKEACAA--GSTITVPKGEYMVESLEFKGPCKGPVTLEL 131

Query: 91  EGIMEAPLHAHSMKIDHSWVVFQYINGFTLSGG-GTFDGQGAHTWNKSDCPSKGKCSAIP 150
            G  +AP    + K    W+ F+ I  FTL+G    FDGQG+  W  +DC   GKC+++P
Sbjct: 132 NGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLP 191

Query: 151 ISLRFHNLNNSVIEDITSTDSKFFHINVLNCRNVTLQKININAPDESPNTDGIHIGRSSG 210
           I++RF  L NS I  ITST+SK FH+N+LNC+N+TL  I I+AP ES NTDGIHIGRS+G
Sbjct: 192 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNG 251

Query: 211 VNIRDTTIKTGDDCISIGDGSQQINIEKVTCGPGHGISIGSLGLYKNEQPVSGIFVKDCT 270
           VN+    IKTGDDC+SIGDG++ + +E V CGPGHGISIGSLG Y NEQPV G+ V+ C 
Sbjct: 252 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 311

Query: 271 LSNTEYGVRVKSWPDSTKAIATNMQFEGIVMNNVVTPILIDQQYCPYGKC 320
           + NT+ GVR+K+WP S   IA+N+ FE I M+NV  P+LIDQ+YCPYG C
Sbjct: 312 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHC 359

[Close]

BLAST of Sed0012261 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 314.7 bits (805), Expect = 9.1e-86
Identity = 153/316 (48.42%), Postives = 216/316 (68.35%), Query Frame = 0


Query: 10  ATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKSTKASKVLIPKG 69
           +T  I+CL G+ +N +        F       SD TQA++KA+ +AC+S+  SKV+IPKG
Sbjct: 8   STIFIICLLGISANAEV-------FTIGSSSGSDITQALLKAFTSACQSSSPSKVVIPKG 67

Query: 70  TYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFTLSGGGTFDGQ 129
            + +  I++ GPC API   ++G ++A  +A   K    WVVF  I+GF L+GGG FDG+
Sbjct: 68  EFKLGEIEMRGPCKAPIEVTLQGTVKADGNAIQGK--EKWVVFGNIDGFKLNGGGAFDGE 127

Query: 130 GAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLNCRNVTLQKIN 189
           G   W  ++C    +C  +PIS+RF  + NS I DI+S D+K FHINVL  +N+T+  I 
Sbjct: 128 GNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIK 187

Query: 190 INAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVTCGPGHGISIG 249
           I AP++SPNTDGIH+GRS GV I ++ I TGDDCIS+GDG + +++EKVTCGPGHGIS+G
Sbjct: 188 IVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVG 247

Query: 250 SLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDST-KAIATNMQFEGIVMNNVVTPIL 309
           SLG Y +EQ VSGI V +CTL  T+ G+R+K+WP +     A+++ FE I++ +V  PIL
Sbjct: 248 SLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPIL 307

Query: 310 IDQQYCPYGKCNHKPA 325
           IDQ+YCP+ +CN + A
Sbjct: 308 IDQEYCPWNQCNKQKA 314

[Close]

BLAST of Sed0012261 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 308.1 bits (788), Expect = 8.5e-84
Identity = 151/318 (47.48%), Postives = 211/318 (66.35%), Query Frame = 0


Query: 9   SATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKSTKASKVLIPK 68
           SA   ++ L G  +N +        F   G   SD TQA++KA+ +AC++  ASKV+I K
Sbjct: 8   SAVLFVISLLGFSANAEV-------FNVGGSPGSDITQALLKAFTSACQAPTASKVVITK 67

Query: 69  GTYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFTLSGGGTFDG 128
           G + +  I++ GPC AP+   ++G ++A   A   K    WVVF  INGF L+GGG FDG
Sbjct: 68  GEFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQGK--ERWVVFLRINGFKLNGGGIFDG 127

Query: 129 QGAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLNCRNVTLQKI 188
           +G   W  ++C    +C  +PIS+RF  + N+ I DI+S D+K FHINVL  +N+T   +
Sbjct: 128 EGNAAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNV 187

Query: 189 NINAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVTCGPGHGISI 248
            + AP ESPNTDGIH+GRS GV I ++ I TGDDCIS+GDG + +++E V CGPGHGIS+
Sbjct: 188 KVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISV 247

Query: 249 GSLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDSTKA-IATNMQFEGIVMNNVVTPI 308
           GSLG Y +EQ V+GI V +CTL  T+ G+R+K+WP +  A  A+ + FE I++NNV  PI
Sbjct: 248 GSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPI 307

Query: 309 LIDQQYCPYGKCN-HKPA 325
           LIDQ+YCP+ +CN  KP+
Sbjct: 308 LIDQEYCPWNQCNKQKPS 316

[Close]

BLAST of Sed0012261 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 302.8 bits (774), Expect = 3.6e-82
Identity = 147/317 (46.37%), Postives = 208/317 (65.62%), Query Frame = 0


Query: 10  ATFIILCLWGLISNVQADDFLVKKFGARGDGKSDDTQAIMKAWHAACKSTKASKVLIPKG 69
           + F + CL GL +N        K F       SD T A++KA++ AC+    S V+IPKG
Sbjct: 9   SAFFVFCLLGLSAN-------AKIFNINSPPGSDITNALLKAFNEACQFPTKSTVMIPKG 68

Query: 70  TYVVDSIKLLGPCNAPIHFRMEGIMEAPLHAHSMKIDHSWVVFQYINGFTLSGGGTFDGQ 129
            Y +  I ++GPC API   + G ++A  +A+  +    WV F+ INGF L+GGG FDG+
Sbjct: 69  EYKLGEIVMMGPCKAPIRIALLGTVKADGNANGKE---KWVAFRNINGFKLNGGGVFDGE 128

Query: 130 GAHTWNKSDCPSKGKCSAIPISLRFHNLNNSVIEDITSTDSKFFHINVLNCRNVTLQKIN 189
           G   W  ++C     C  +PIS+RF  + ++ I  ITS D+K FHINV+  +NVT + + 
Sbjct: 129 GNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVK 188

Query: 190 INAPDESPNTDGIHIGRSSGVNIRDTTIKTGDDCISIGDGSQQINIEKVTCGPGHGISIG 249
           I AP ESPNTDGIH+GRS G+ I ++ I TGDDC+S+GDG + + +E+VTCGPGHGISIG
Sbjct: 189 IIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIG 248

Query: 250 SLGLYKNEQPVSGIFVKDCTLSNTEYGVRVKSWPDST-KAIATNMQFEGIVMNNVVTPIL 309
           SLG Y +E+ VSGI + +CTL  T+ G+R+K+WP +     A+++ FE I++ NV  PIL
Sbjct: 249 SLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPIL 308

Query: 310 IDQQYCPYGKCN-HKPA 325
           IDQ+YCP+ +CN  KP+
Sbjct: 309 IDQEYCPWNQCNKQKPS 315

The following BLAST results are available for this feature:

BLAST of Sed0012261 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888575.1	1.9e-133	60.25	exopolygalacturonase clone GBGA483-like [Benincasa hispida]	[more]
XP_004144612.1	2.7e-132	60.00	exopolygalacturonase clone GBGA483 [Cucumis sativus] >KGN43473.2 hypothetical pr...	[more]
KAA0059180.1	1.5e-130	59.35	exopolygalacturonase [Cucumis melo var. makuwa] >TYK19339.1 exopolygalacturonase...	[more]
XP_008462107.1	4.3e-130	59.10	PREDICTED: exopolygalacturonase clone GBGA483 [Cucumis melo]	[more]
XP_022136051.1	2.1e-124	68.21	exopolygalacturonase clone GBGA483-like [Momordica charantia]	[more]

BLAST of Sed0012261 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39786	2.0e-93	51.78	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q39766	7.5e-93	51.46	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
P49063	1.6e-90	53.10	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 ...	[more]
Q6H9K0	2.2e-84	51.19	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
P24548	2.0e-82	50.72	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]

BLAST of Sed0012261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6I9	1.3e-140	70.71	Polygalacturonase OS=Cucumis sativus OX=3659 GN=Csa_7G033440 PE=3 SV=1	[more]
A0A5A7UVQ4	7.2e-131	59.35	Exopolygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295...	[more]
A0A1S3CG85	2.1e-130	59.10	exopolygalacturonase clone GBGA483 OS=Cucumis melo OX=3656 GN=LOC103500536 PE=3 ...	[more]
A0A6J1C2F3	1.0e-124	68.21	exopolygalacturonase clone GBGA483-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1HVG8	5.5e-123	66.15	exopolygalacturonase clone GBGA483-like OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]

BLAST of Sed0012261 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14040.1	5.0e-92	53.10	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	1.1e-91	53.10	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	9.1e-86	48.42	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	8.5e-84	47.48	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	3.6e-82	46.37	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 180..206 e-value: 370.0 score: 9.9 coord: 207..228 e-value: 86.0 score: 12.0 coord: 260..281 e-value: 14.0 score: 14.7
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 56..322 e-value: 5.2E-84 score: 282.1
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 237..250
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 19..331 e-value: 6.3E-95 score: 320.5
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 29..322
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 29..322
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 27..329

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012261.1	Sed0012261.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity