Sed0012223 (gene) Chayote v1

Overview


Name	Sed0012223
Type	gene
Organism	Sechium edule (Chayote v1)
Description	WD repeat-containing protein LWD1-like
Location	LG06: 3386610 .. 3388660 (+)
RNA-Seq Expression	Sed0012223
Synteny	Sed0012223

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCATTATTAAAAAAAGAGTACCAAAATGGAAATTTAGCTCTAATACAGACCTTTTTTCGCAATTCTTCAATTCATGGCAGTGTATCGGATTTGACTCAGTCCGCAACCAGAAGATTAAGAACCAAGAAATTAGGGTTTTCAATCGCATCGAAGAAGAAGATCCAGAGATTTCCGATGGGAGCAAACACCGACGCCAATCCAGAAAACTCCGACGATCAGCAAAAGCGATCGGAGATCTACACCTACGAAGCGCCATGGCACATCTACGCCATGAACTGGAGCGTCCGTCGCGACAAGAAGTACCGTCTCGCCATTGCCAGCCTCCTCGAGCAGTACCCCAACCGCGTCGAGATCGTCCAGCTCGATGATTCCAGCGGCGAGATCCGCTCCGATCCCAACCTCTCCTTCGAGCACCCTTACCCTCCGACCAAGACCAACTTCATCCCCGACAAGGAGTGCAACCGCCCCGACCTCCTCGCCACTTCCAGCGATTTCCTCCGCGTATGGCGGATCTCCGACGACTCCACCTCCGTCGAGCTCAAGAGCGTCCTTAACGGCAACAAGAACAGCGAGTTTTGTGGCCCTCTCACTTCCTTTGATTGGAACGATGCCGAGCCGAAGCGAATCGGGACTTCGAGTATTGATACGACCTGCACAATTTGGGATATTGAGCGGGAGACGGTGGATACGCAGCTGATTGCTCATGATAAGGAGGTTTACGACATTGCCTGGGGCGGTGTTGGTGTTTTTGCTTCTGTTTCTGCTGATGGCTCTGTTCGGGTTTTCGATTTGCGGGATAAGGAGCATTCGACGATCATTTACGAGAGTTCTGAGCCGGATACTCCGTTGGTTAGGTTAGGTTGGAATAAGCAGGATCCGAGATATATGGCTACGATCATTATGGACAGTGCTAAGGTTGTTGTGCTTGACATTCGCTTTCCGACTCTTCCGGTCGTCGAGTTGCAGCGGCATCAAGCTAGTGTGAATGCCATTGCTTGGGCTCCCCATAGTTCTTGCCATATCTGTACTGCAGGGGATGATTCTCAGGCATTGATTTGGGATTTGTCGTCCATGGGGCAGCCCGTTGAAGGTGGGCTTGATCCTATTCTTGCCTACACGGCTGGAGCGGAAATCGAGCAGCTGCAATGGTCTTCTTCCCAGCCGGATTGGGTTGCCATTGCCTTTTCTACTAAGCTTCAGATTCTGAGGGTTTGAATCTGATACATGTGAGTGATTCTATGTAGCTTTTCAACTAGTTATGCATATAGTATCTTATTTGTTCTGGCATGTTTCTTCTGTTTCTTTTCGCAATAACACTTTGCCCATGTTACTAATTGTGTTCATCCTTGCTATAAGATTGTCGAATTGTTCATGTAGCCATAATTTGCCTATAGCTGTTTGTACTCCATTCTTCTGGGTTTTGACCAATTTTCCTTTTTGCATATACACCCAGCTTCTTCACCTACATGGATAGCCATGTCCGGGAACCATCATGTGTTACATTGTTGTGCTTAGTCAACTTGATATATTCCATATCCATCCTTTAAGACCTGCACAACCTGCAAAAGATGCATAGTTGTTTTCTCTATCTTTTTTTTTGAAACAAGGGTAATCACGCCCGTCCCTAGGCCAGGCACCGGAGACATCGAAGGAGTATTATCACAGGAAAGACTCGAATTCGGGACCTGAAGGGGAGCATGCCCTCAAAGTCCAAGTCTTCAACCACTGCGCCACCCCTTGGGGACTAGTTGTTTTCTCTATCTAATAACCATCCTAGGCTGACCTAGTGGTCAAAGAGGACCTTAGAGATCCAAGCGATTATGGAGTTAAATCCATGGCAACCACCTACCTAAAATATATTTCTTGAGTTTCCTCAGACATCCAAATATTGTAGATAAGATGGTGTGTATCGTGTGAATAGTCGAAATGCTAATAAGCCAGCTTGGACACTCACATCTCACACACATATATATATATATTTAGAAGGCTTTGTAAATAGACCTCTCTCTATTTAGCAAGTTACCACCTATGGAATTATTTATTTCTGAAA

mRNA sequence

GGCATTATTAAAAAAAGAGTACCAAAATGGAAATTTAGCTCTAATACAGACCTTTTTTCGCAATTCTTCAATTCATGGCAGTGTATCGGATTTGACTCAGTCCGCAACCAGAAGATTAAGAACCAAGAAATTAGGGTTTTCAATCGCATCGAAGAAGAAGATCCAGAGATTTCCGATGGGAGCAAACACCGACGCCAATCCAGAAAACTCCGACGATCAGCAAAAGCGATCGGAGATCTACACCTACGAAGCGCCATGGCACATCTACGCCATGAACTGGAGCGTCCGTCGCGACAAGAAGTACCGTCTCGCCATTGCCAGCCTCCTCGAGCAGTACCCCAACCGCGTCGAGATCGTCCAGCTCGATGATTCCAGCGGCGAGATCCGCTCCGATCCCAACCTCTCCTTCGAGCACCCTTACCCTCCGACCAAGACCAACTTCATCCCCGACAAGGAGTGCAACCGCCCCGACCTCCTCGCCACTTCCAGCGATTTCCTCCGCGTATGGCGGATCTCCGACGACTCCACCTCCGTCGAGCTCAAGAGCGTCCTTAACGGCAACAAGAACAGCGAGTTTTGTGGCCCTCTCACTTCCTTTGATTGGAACGATGCCGAGCCGAAGCGAATCGGGACTTCGAGTATTGATACGACCTGCACAATTTGGGATATTGAGCGGGAGACGGTGGATACGCAGCTGATTGCTCATGATAAGGAGGTTTACGACATTGCCTGGGGCGGTGTTGGTGTTTTTGCTTCTGTTTCTGCTGATGGCTCTGTTCGGGTTTTCGATTTGCGGGATAAGGAGCATTCGACGATCATTTACGAGAGTTCTGAGCCGGATACTCCGTTGGTTAGGTTAGGTTGGAATAAGCAGGATCCGAGATATATGGCTACGATCATTATGGACAGTGCTAAGGTTGTTGTGCTTGACATTCGCTTTCCGACTCTTCCGGTCGTCGAGTTGCAGCGGCATCAAGCTAGTGTGAATGCCATTGCTTGGGCTCCCCATAGTTCTTGCCATATCTGTACTGCAGGGGATGATTCTCAGGCATTGATTTGGGATTTGTCGTCCATGGGGCAGCCCGTTGAAGGTGGGCTTGATCCTATTCTTGCCTACACGGCTGGAGCGGAAATCGAGCAGCTGCAATGGTCTTCTTCCCAGCCGGATTGGGTTGCCATTGCCTTTTCTACTAAGCTTCAGATTCTGAGGGTTTGAATCTGATACATCTTCTTCACCTACATGGATAGCCATGTCCGGGAACCATCATGTGTTACATTGTTGTGCTTAGTCAACTTGATATATTCCATATCCATCCTTTAAGACCTGCACAACCTGCAAAAGATGCATAGTTGTTTTCTCTATCTTTTTTTTTGAAACAAGGGTAATCACGCCCGTCCCTAGGCCAGGCACCGGAGACATCGAAGGAGTATTATCACAGGAAAGACTCGAATTCGGGACCTGAAGGGGAGCATGCCCTCAAAGTCCAAGTCTTCAACCACTGCGCCACCCCTTGGGGACTAGTTGTTTTCTCTATCTAATAACCATCCTAGGCTGACCTAGTGGTCAAAGAGGACCTTAGAGATCCAAGCGATTATGGAGTTAAATCCATGGCAACCACCTACCTAAAATATATTTCTTGAGTTTCCTCAGACATCCAAATATTGTAGATAAGATGGTGTGTATCGTGTGAATAGTCGAAATGCTAATAAGCCAGCTTGGACACTCACATCTCACACACATATATATATATATTTAGAAGGCTTTGTAAATAGACCTCTCTCTATTTAGCAAGTTACCACCTATGGAATTATTTATTTCTGAAA

Coding sequence (CDS)

ATGGGAGCAAACACCGACGCCAATCCAGAAAACTCCGACGATCAGCAAAAGCGATCGGAGATCTACACCTACGAAGCGCCATGGCACATCTACGCCATGAACTGGAGCGTCCGTCGCGACAAGAAGTACCGTCTCGCCATTGCCAGCCTCCTCGAGCAGTACCCCAACCGCGTCGAGATCGTCCAGCTCGATGATTCCAGCGGCGAGATCCGCTCCGATCCCAACCTCTCCTTCGAGCACCCTTACCCTCCGACCAAGACCAACTTCATCCCCGACAAGGAGTGCAACCGCCCCGACCTCCTCGCCACTTCCAGCGATTTCCTCCGCGTATGGCGGATCTCCGACGACTCCACCTCCGTCGAGCTCAAGAGCGTCCTTAACGGCAACAAGAACAGCGAGTTTTGTGGCCCTCTCACTTCCTTTGATTGGAACGATGCCGAGCCGAAGCGAATCGGGACTTCGAGTATTGATACGACCTGCACAATTTGGGATATTGAGCGGGAGACGGTGGATACGCAGCTGATTGCTCATGATAAGGAGGTTTACGACATTGCCTGGGGCGGTGTTGGTGTTTTTGCTTCTGTTTCTGCTGATGGCTCTGTTCGGGTTTTCGATTTGCGGGATAAGGAGCATTCGACGATCATTTACGAGAGTTCTGAGCCGGATACTCCGTTGGTTAGGTTAGGTTGGAATAAGCAGGATCCGAGATATATGGCTACGATCATTATGGACAGTGCTAAGGTTGTTGTGCTTGACATTCGCTTTCCGACTCTTCCGGTCGTCGAGTTGCAGCGGCATCAAGCTAGTGTGAATGCCATTGCTTGGGCTCCCCATAGTTCTTGCCATATCTGTACTGCAGGGGATGATTCTCAGGCATTGATTTGGGATTTGTCGTCCATGGGGCAGCCCGTTGAAGGTGGGCTTGATCCTATTCTTGCCTACACGGCTGGAGCGGAAATCGAGCAGCTGCAATGGTCTTCTTCCCAGCCGGATTGGGTTGCCATTGCCTTTTCTACTAAGCTTCAGATTCTGAGGGTTTGA

Protein sequence

MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSVELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV

Homology

[Close]

BLAST of Sed0012223 vs. NCBI nr
Match: XP_023529099.1 (WD repeat-containing protein LWD1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 696.0 bits (1795), Expect = 1.6e-196
Identity = 338/346 (97.69%), Postives = 343/346 (99.13%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           MGAN+DANP+ SD+QQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSDANPDASDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLDDSSGEIRSDPNLSFEHPYPPTKT FIPDKEC RPDLLATSSDFLRVWRISDDS+SV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDSSSV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS+LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Sed0012223 vs. NCBI nr
Match: XP_022935540.1 (WD repeat-containing protein LWD1-like [Cucurbita moschata] >XP_022983533.1 WD repeat-containing protein LWD1-like [Cucurbita maxima] >KAG6581153.1 WD repeat-containing protein LWD1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017887.1 WD repeat-containing protein LWD1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 694.5 bits (1791), Expect = 4.6e-196
Identity = 337/346 (97.40%), Postives = 342/346 (98.84%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           MGAN+D NP+ SD+QQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSDTNPDASDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLDDSSGEIRSDPNLSFEHPYPPTKT FIPDKEC RPDLLATSSDFLRVWRISDDS+SV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDSSSV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS+LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Sed0012223 vs. NCBI nr
Match: XP_022148224.1 (WD repeat-containing protein LWD1 [Momordica charantia])

HSP 1 Score: 689.9 bits (1779), Expect = 1.1e-194
Identity = 335/346 (96.82%), Postives = 340/346 (98.27%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           MGAN+D N + SD+QQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSDPNQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLDDSSGEIRSDPNLSFEHPYPPTKT FIPDKEC RPDLLATSSDFLRVWRISDD +SV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS+LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Sed0012223 vs. NCBI nr
Match: XP_022928340.1 (WD repeat-containing protein LWD1 isoform X2 [Cucurbita moschata] >XP_022989681.1 WD repeat-containing protein LWD1 isoform X2 [Cucurbita maxima] >XP_023529991.1 WD repeat-containing protein LWD1 isoform X2 [Cucurbita pepo subsp. pepo] >KAG7022601.1 WD repeat-containing protein LWD1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 688.7 bits (1776), Expect = 2.5e-194
Identity = 334/346 (96.53%), Postives = 340/346 (98.27%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           MGAN++AN + SD+QQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLDDSSGEIRSDPNLSFEHPYPPTKT FIPDKEC RPDLLATSSDFLRVWRISDD +SV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS+LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           IIMDSAKVVVLDIRFPTLPVVELQRHQAS NAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Sed0012223 vs. NCBI nr
Match: KAG6588848.1 (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 688.7 bits (1776), Expect = 2.5e-194
Identity = 334/346 (96.53%), Postives = 340/346 (98.27%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           MGAN++AN + SD+QQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLDDSSGEIRSDPNLSFEHPYPPTKT FIPDKEC RPDLLATSSDFLRVWRISDD +SV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS+LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           IIMDSAKVVVLDIRFPTLPVVELQRHQAS NAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Sed0012223 vs. ExPASy Swiss-Prot
Match: Q9LPV9 (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 1.1e-187
Identity = 317/346 (91.62%), Postives = 330/346 (95.38%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           MG ++D   + SD+QQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAI SLLEQYPNRVEI
Sbjct: 1   MGTSSDPIQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLD+S+GEIRSDPNLSFEHPYPPTKT FIPDKEC RPDLLATSSDFLR+WRI+DD + V
Sbjct: 61  VQLDESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS LN NKNSEFCGPLTSFDWN+AEP+RIGTSS DTTCTIWDIERE VDTQLIAHDKE
Sbjct: 121 ELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           V+DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           IIMDSAKVVVLDIRFP LPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD+SSM
Sbjct: 241 IIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQ VEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
Sbjct: 301 GQHVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Sed0012223 vs. ExPASy Swiss-Prot
Match: Q38960 (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 3.8e-177
Identity = 298/346 (86.13%), Postives = 319/346 (92.20%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           M  ++D     S++Q KRSEIYTYEAPW IYAMNWS+RRDKKYRLAI SL+EQYPNRVEI
Sbjct: 1   MVTSSDQIQNGSEEQSKRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLD+S+GEIRSDPNL FEHPYPPTKT+FIPDKEC RPDLLATSSDFLR+WRISDD + V
Sbjct: 61  VQLDESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS L+ +KNSEF GP+TSFDWN+AEP+RIGTSSIDTTCTIWDIERE VDTQLIAHDKE
Sbjct: 121 ELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           VYDIAWGGVGVFASVS DGSVRVFDLRDKEHSTIIYES EP TPLVRL WNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           +IM SAK+VVLDIRFP LPVVELQRHQASVNAIAWAPHSS HIC+AGDDSQALIWD+SSM
Sbjct: 241 VIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQ VEGGLDPILAYTAGAE+EQLQWSSSQPDWVAIAFS KLQILRV
Sbjct: 301 GQHVEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]

BLAST of Sed0012223 vs. ExPASy Swiss-Prot
Match: Q9XGN1 (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 5.2e-126
Identity = 222/341 (65.10%), Postives = 269/341 (78.89%), Query Frame = 0


Query: 11  NSDDQQKRSE-IYTYEAPWHIYAMNW-SVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSG 70
           ++ D   RSE   TY++P+ +YAM + S+R    +R+A+ S LE Y NR++I+  D  S 
Sbjct: 4   SAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSM 63

Query: 71  EIRSDPNLSFEHPYPPTKTNFIPDKECNRP---DLLATSSDFLRVWRISDDSTSVELKSV 130
            ++  PNLSFEHPYPPTK  F P     RP   DLLA+S DFLR+W I++DS++VE  SV
Sbjct: 64  TVKPLPNLSFEHPYPPTKLMFSP-PSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISV 123

Query: 131 LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIA 190
           LN +K SEFC PLTSFDWND EPKR+GT SIDTTCTIWDIE+  V+TQLIAHDKEV+DIA
Sbjct: 124 LNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIA 183

Query: 191 WGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDS 250
           WG   VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS
Sbjct: 184 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 243

Query: 251 AKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVE 310
            KVV+LDIR PT+PV EL+RHQASVNAIAWAP S  HIC+ GDD+QALIW+L ++  P  
Sbjct: 244 NKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP-- 303

Query: 311 GGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
            G+DP+  Y+AG+EI QLQWSSSQPDW+ IAF+ K+Q+LRV
Sbjct: 304 NGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of Sed0012223 vs. ExPASy Swiss-Prot
Match: Q552R1 (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr68 PE=3 SV=2)

HSP 1 Score: 411.0 bits (1055), Expect = 1.3e-113
Identity = 198/331 (59.82%), Postives = 251/331 (75.83%), Query Frame = 0


Query: 17  KRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIRSDPNL 76
           ++  IYTY +PW IY ++WS R ++ +RLAI S LE Y NRV+++QL++ + +   +   
Sbjct: 2   EKKRIYTYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQF--EVVC 61

Query: 77  SFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSVELKSVLNGNKNSEFCG 136
            FEHPYPPTK  +IPDK  NRPDLLAT+ D+LR+W +  +  S++LKS+L  N  SEFC 
Sbjct: 62  GFEHPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLT-NVISEFCA 121

Query: 137 PLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIAWG-GVGVFASV 196
           PL+SFDWN+ +P  + TSSIDTTCTIW+IE     TQLIAHDKEV+DIA+  G  +FASV
Sbjct: 122 PLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASV 181

Query: 197 SADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF 256
            ADGS+R+FDLR+ EHSTIIYE+     PL+RL WNKQDP Y+ATI  DS KV++LDIR 
Sbjct: 182 GADGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIRV 241

Query: 257 PTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYT 316
           P++P  EL  H+++VN I+WAPHSSCHICT  DD QALIWDLSSM +P+E   DP+L Y 
Sbjct: 242 PSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE---DPLLTYN 301

Query: 317 AGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           A AEI QL WSSSQPDW+AIAFS+ LQIL+V
Sbjct: 302 ALAEINQLSWSSSQPDWIAIAFSSHLQILKV 325

[Close]

BLAST of Sed0012223 vs. ExPASy Swiss-Prot
Match: P61962 (DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.1e-112
Identity = 203/345 (58.84%), Postives = 248/345 (71.88%), Query Frame = 0


Query: 17  KRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIRSDPNL 76
           KR EIY YEAPW +YAMNWSVR DK++RLA+ S +E+Y N+V++V LD+ S E       
Sbjct: 6   KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFIC--RN 65

Query: 77  SFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSVELKSVLNGNKNSEFCG 136
           +F+HPYP TK  +IPD +   PDLLATS D+LRVWR+ +  T   L+ +LN NKNS+FC 
Sbjct: 66  TFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGE--TETRLECLLNNNKNSDFCA 125

Query: 137 PLTSFDWNDAEPKRIGTSSIDTTCTIWDIERET-----------VDTQLIAHDKEVYDIA 196
           PLTSFDWN+ +P  +GTSSIDTTCTIW +E              V TQLIAHDKEVYDIA
Sbjct: 126 PLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIA 185

Query: 197 W----GGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATI 256
           +    GG  +FASV ADGSVR+FDLR  EHSTIIYE  +   PL+RL WNKQDP Y+AT+
Sbjct: 186 FSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATM 245

Query: 257 IMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMG 316
            MD  +VV+LD+R P  PV  L  H+A VN IAWAPHSSCHICTA DD QALIWD+  M 
Sbjct: 246 AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMP 305

Query: 317 QPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           + +E   DPILAYTA  EI  +QW+S+QPDW+AI ++  L+ILRV
Sbjct: 306 RAIE---DPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342

[Close]

BLAST of Sed0012223 vs. ExPASy TrEMBL
Match: A0A6J1J806 (WD repeat-containing protein LWD1-like OS=Cucurbita maxima OX=3661 GN=LOC111482105 PE=4 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 2.2e-196
Identity = 337/346 (97.40%), Postives = 342/346 (98.84%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           MGAN+D NP+ SD+QQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSDTNPDASDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLDDSSGEIRSDPNLSFEHPYPPTKT FIPDKEC RPDLLATSSDFLRVWRISDDS+SV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDSSSV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS+LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Sed0012223 vs. ExPASy TrEMBL
Match: A0A6J1FAX3 (WD repeat-containing protein LWD1-like OS=Cucurbita moschata OX=3662 GN=LOC111442381 PE=4 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 2.2e-196
Identity = 337/346 (97.40%), Postives = 342/346 (98.84%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           MGAN+D NP+ SD+QQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSDTNPDASDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLDDSSGEIRSDPNLSFEHPYPPTKT FIPDKEC RPDLLATSSDFLRVWRISDDS+SV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDSSSV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS+LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Sed0012223 vs. ExPASy TrEMBL
Match: A0A6J1D3C8 (WD repeat-containing protein LWD1 OS=Momordica charantia OX=3673 GN=LOC111016936 PE=4 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 5.5e-195
Identity = 335/346 (96.82%), Postives = 340/346 (98.27%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           MGAN+D N + SD+QQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSDPNQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLDDSSGEIRSDPNLSFEHPYPPTKT FIPDKEC RPDLLATSSDFLRVWRISDD +SV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS+LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Sed0012223 vs. ExPASy TrEMBL
Match: A0A6J1JKU2 (WD repeat-containing protein LWD1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486692 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 1.2e-194
Identity = 334/346 (96.53%), Postives = 340/346 (98.27%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           MGAN++AN + SD+QQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLDDSSGEIRSDPNLSFEHPYPPTKT FIPDKEC RPDLLATSSDFLRVWRISDD +SV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS+LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           IIMDSAKVVVLDIRFPTLPVVELQRHQAS NAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Sed0012223 vs. ExPASy TrEMBL
Match: A0A6J1ERG2 (WD repeat-containing protein LWD1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435197 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 1.2e-194
Identity = 334/346 (96.53%), Postives = 340/346 (98.27%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           MGAN++AN + SD+QQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLDDSSGEIRSDPNLSFEHPYPPTKT FIPDKEC RPDLLATSSDFLRVWRISDD +SV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS+LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           IIMDSAKVVVLDIRFPTLPVVELQRHQAS NAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Sed0012223 vs. TAIR 10
Match: AT1G12910.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 657.1 bits (1694), Expect = 7.6e-189
Identity = 317/346 (91.62%), Postives = 330/346 (95.38%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           MG ++D   + SD+QQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAI SLLEQYPNRVEI
Sbjct: 1   MGTSSDPIQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLD+S+GEIRSDPNLSFEHPYPPTKT FIPDKEC RPDLLATSSDFLR+WRI+DD + V
Sbjct: 61  VQLDESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS LN NKNSEFCGPLTSFDWN+AEP+RIGTSS DTTCTIWDIERE VDTQLIAHDKE
Sbjct: 121 ELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           V+DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           IIMDSAKVVVLDIRFP LPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD+SSM
Sbjct: 241 IIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQ VEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
Sbjct: 301 GQHVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Sed0012223 vs. TAIR 10
Match: AT3G26640.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 622.1 bits (1603), Expect = 2.7e-178
Identity = 298/346 (86.13%), Postives = 319/346 (92.20%), Query Frame = 0


Query: 1   MGANTDANPENSDDQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60
           M  ++D     S++Q KRSEIYTYEAPW IYAMNWS+RRDKKYRLAI SL+EQYPNRVEI
Sbjct: 1   MVTSSDQIQNGSEEQSKRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEI 60

Query: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTNFIPDKECNRPDLLATSSDFLRVWRISDDSTSV 120
           VQLD+S+GEIRSDPNL FEHPYPPTKT+FIPDKEC RPDLLATSSDFLR+WRISDD + V
Sbjct: 61  VQLDESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRV 120

Query: 121 ELKSVLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180
           ELKS L+ +KNSEF GP+TSFDWN+AEP+RIGTSSIDTTCTIWDIERE VDTQLIAHDKE
Sbjct: 121 ELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKE 180

Query: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240
           VYDIAWGGVGVFASVS DGSVRVFDLRDKEHSTIIYES EP TPLVRL WNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMAT 240

Query: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300
           +IM SAK+VVLDIRFP LPVVELQRHQASVNAIAWAPHSS HIC+AGDDSQALIWD+SSM
Sbjct: 241 VIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSM 300

Query: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
           GQ VEGGLDPILAYTAGAE+EQLQWSSSQPDWVAIAFS KLQILRV
Sbjct: 301 GQHVEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]

BLAST of Sed0012223 vs. TAIR 10
Match: AT5G24520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 452.2 bits (1162), Expect = 3.7e-127
Identity = 222/341 (65.10%), Postives = 269/341 (78.89%), Query Frame = 0


Query: 11  NSDDQQKRSE-IYTYEAPWHIYAMNW-SVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSG 70
           ++ D   RSE   TY++P+ +YAM + S+R    +R+A+ S LE Y NR++I+  D  S 
Sbjct: 4   SAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSM 63

Query: 71  EIRSDPNLSFEHPYPPTKTNFIPDKECNRP---DLLATSSDFLRVWRISDDSTSVELKSV 130
            ++  PNLSFEHPYPPTK  F P     RP   DLLA+S DFLR+W I++DS++VE  SV
Sbjct: 64  TVKPLPNLSFEHPYPPTKLMFSP-PSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISV 123

Query: 131 LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIA 190
           LN +K SEFC PLTSFDWND EPKR+GT SIDTTCTIWDIE+  V+TQLIAHDKEV+DIA
Sbjct: 124 LNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIA 183

Query: 191 WGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDS 250
           WG   VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS
Sbjct: 184 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 243

Query: 251 AKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVE 310
            KVV+LDIR PT+PV EL+RHQASVNAIAWAP S  HIC+ GDD+QALIW+L ++  P  
Sbjct: 244 NKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP-- 303

Query: 311 GGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
            G+DP+  Y+AG+EI QLQWSSSQPDW+ IAF+ K+Q+LRV
Sbjct: 304 NGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of Sed0012223 vs. TAIR 10
Match: AT5G24520.3 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 452.2 bits (1162), Expect = 3.7e-127
Identity = 222/341 (65.10%), Postives = 269/341 (78.89%), Query Frame = 0


Query: 11  NSDDQQKRSE-IYTYEAPWHIYAMNW-SVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSG 70
           ++ D   RSE   TY++P+ +YAM + S+R    +R+A+ S LE Y NR++I+  D  S 
Sbjct: 4   SAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSM 63

Query: 71  EIRSDPNLSFEHPYPPTKTNFIPDKECNRP---DLLATSSDFLRVWRISDDSTSVELKSV 130
            ++  PNLSFEHPYPPTK  F P     RP   DLLA+S DFLR+W I++DS++VE  SV
Sbjct: 64  TVKPLPNLSFEHPYPPTKLMFSP-PSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISV 123

Query: 131 LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIA 190
           LN +K SEFC PLTSFDWND EPKR+GT SIDTTCTIWDIE+  V+TQLIAHDKEV+DIA
Sbjct: 124 LNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIA 183

Query: 191 WGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDS 250
           WG   VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS
Sbjct: 184 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 243

Query: 251 AKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVE 310
            KVV+LDIR PT+PV EL+RHQASVNAIAWAP S  HIC+ GDD+QALIW+L ++  P  
Sbjct: 244 NKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP-- 303

Query: 311 GGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
            G+DP+  Y+AG+EI QLQWSSSQPDW+ IAF+ K+Q+LRV
Sbjct: 304 NGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of Sed0012223 vs. TAIR 10
Match: AT5G24520.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 452.2 bits (1162), Expect = 3.7e-127
Identity = 222/341 (65.10%), Postives = 269/341 (78.89%), Query Frame = 0


Query: 11  NSDDQQKRSE-IYTYEAPWHIYAMNW-SVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSG 70
           ++ D   RSE   TY++P+ +YAM + S+R    +R+A+ S LE Y NR++I+  D  S 
Sbjct: 4   SAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSM 63

Query: 71  EIRSDPNLSFEHPYPPTKTNFIPDKECNRP---DLLATSSDFLRVWRISDDSTSVELKSV 130
            ++  PNLSFEHPYPPTK  F P     RP   DLLA+S DFLR+W I++DS++VE  SV
Sbjct: 64  TVKPLPNLSFEHPYPPTKLMFSP-PSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISV 123

Query: 131 LNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIA 190
           LN +K SEFC PLTSFDWND EPKR+GT SIDTTCTIWDIE+  V+TQLIAHDKEV+DIA
Sbjct: 124 LNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIA 183

Query: 191 WGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDS 250
           WG   VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS
Sbjct: 184 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 243

Query: 251 AKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVE 310
            KVV+LDIR PT+PV EL+RHQASVNAIAWAP S  HIC+ GDD+QALIW+L ++  P  
Sbjct: 244 NKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP-- 303

Query: 311 GGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 347
            G+DP+  Y+AG+EI QLQWSSSQPDW+ IAF+ K+Q+LRV
Sbjct: 304 NGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

The following BLAST results are available for this feature:

BLAST of Sed0012223 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529099.1	1.6e-196	97.69	WD repeat-containing protein LWD1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022935540.1	4.6e-196	97.40	WD repeat-containing protein LWD1-like [Cucurbita moschata] >XP_022983533.1 WD r...	[more]
XP_022148224.1	1.1e-194	96.82	WD repeat-containing protein LWD1 [Momordica charantia]	[more]
XP_022928340.1	2.5e-194	96.53	WD repeat-containing protein LWD1 isoform X2 [Cucurbita moschata] >XP_022989681....	[more]
KAG6588848.1	2.5e-194	96.53	Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, partial [Cucurbita ar...	[more]

BLAST of Sed0012223 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPV9	1.1e-187	91.62	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 S...	[more]
Q38960	3.8e-177	86.13	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 S...	[more]
Q9XGN1	5.2e-126	65.10	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 ...	[more]
Q552R1	1.3e-113	59.82	DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 ...	[more]
P61962	1.1e-112	58.84	DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1	[more]

BLAST of Sed0012223 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J806	2.2e-196	97.40	WD repeat-containing protein LWD1-like OS=Cucurbita maxima OX=3661 GN=LOC1114821...	[more]
A0A6J1FAX3	2.2e-196	97.40	WD repeat-containing protein LWD1-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1D3C8	5.5e-195	96.82	WD repeat-containing protein LWD1 OS=Momordica charantia OX=3673 GN=LOC111016936...	[more]
A0A6J1JKU2	1.2e-194	96.53	WD repeat-containing protein LWD1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1ERG2	1.2e-194	96.53	WD repeat-containing protein LWD1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Sed0012223 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12910.1	7.6e-189	91.62	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G26640.1	2.7e-178	86.13	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.1	3.7e-127	65.10	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.3	3.7e-127	65.10	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.2	3.7e-127	65.10	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 167..205 e-value: 2.6E-4 score: 30.4 coord: 256..296 e-value: 3.5E-6 score: 36.5 coord: 119..164 e-value: 0.17 score: 21.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 174..205 e-value: 0.12 score: 13.3 coord: 263..296 e-value: 0.025 score: 15.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 263..299 score: 11.07656
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 8..345 e-value: 1.4E-39 score: 138.2
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 13..346
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 263..299 score: 9.282875
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 283..297
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 56..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012223.1	Sed0012223.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding