Sed0012211 (gene) Chayote v1

Overview


Name	Sed0012211
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SEY1
Location	LG09: 15399141 .. 15400567 (+)
RNA-Seq Expression	Sed0012211
Synteny	Sed0012211

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCATGCAAAAAAACTTGTAGAAAGAGAGGCTTTTTGTCAGGTAGCTCCCTAGAGCCCTAGGTGTCCATGTGCTGTTTTCTTACATATCATAATCTCAACTCTTTAAACCTACACCCTTGCTTGTTTTGGCTTCACCAGACCACTTATGCTTTTTTTTCTTTTTCTTTTTTAAATTAGTCTCTCTACTTTTCCTTCATAATTTTGCTACTTGTTAAACAACTTCCATCTATAAATCCCCTACCCATTTGCAAACTCAGCTCATTTACCCAACTTTCCCACCTCTGACAATCATTTTCTTTCCCCATTTTCCTGGAATCCAAACACCCCAAGAGAGAAAGAAAACAATGGTTTCACCACCATCACCCTCCATAGAACCAATTTCTAGTCCTCGGATATCCTTCTCTTCTGAGTTTCTTGATGAAAGCAACTTCATTTCCATCACTCCTAATTCTCAGATATTGAGAGATCAAGAAGTTTGTGAGAGACAAAGCAAGGAGAGATCAGAGAAGCTGAAATGGAGTGCTGATTTTGAGTTTCTTTCTAATAAAGTTAGCAGTCACTCCATGATTGCGGCCGACGAGCTTTTCTTTGAAGGGAAGCTTCTTCCCTTTTGGCAAATGCAGCAAGCGGAGAGGCTTAACAAAATCAGCCTCAAATCTCCTGAAGAGAACTTGGGGAAGATAGAGGTAAACAAGGAAGCAGAGAACCAAGTGAATTGGTTCCTCGATGACGATCCGTCTCCCAGACCGCCAAAATGCACGGTTCTTTGGAAAGAATTGTTGAGGTTGAAGAAGCAACGCTCCTCGTCTGCGCTATCACCATCTTCTTCTTCATCCTCGTCGTCATCGTTGTCTTCTTCCAGGTCCATGGCTGATGCAGCCACGACAGAGGAAGGCAAGGAAGGGACAACGGGAAACAAAGAGAAAACCATAAAGAGGATAAAGAAGGGTTTGGAAAGGACAAGATCAGCCAATCTAAGAATAAGGCCTATGATTAATGTGGCAATCTGCACACAGGTGAAGAGCAGTGTTTTGCCACCCTTGTTCCCACTTAAGAAAGGAAGACTTGATAGATGAGAAGATGAATACAGTACTAAAGTCAGCAGCGCTCAAGATCTCATCATGTCTACCCCAACGTGTTAATCTCTCTCTATTGCCTCATTTATTGACAAAATTTTCAACTTTCTTTCTTCCTGAGTTGTATGGATTAATGTGTTGATTATGGCAGTGGATCTAATAATCTACAATTGTAAATGCTGACCTCTATTTTTTGTCTGTTGCTATTCCTTGATTAATCGCATTATGCTTCTTTGCTTCGTCATAACTTTTGGTGTACACTTTATCTTTTGTCCTCCTAAATAGCAAAATTTGGCAGTAAACAGTTTAATGTCACATGCTGGGTGCAGCAGCCTCGGATTGGTGGGTC

mRNA sequence

TGCCATGCAAAAAAACTTGTAGAAAGAGAGGCTTTTTGTCAGGTAGCTCCCTAGAGCCCTAGGTGTCCATGTGCTGTTTTCTTACATATCATAATCTCAACTCTTTAAACCTACACCCTTGCTTGTTTTGGCTTCACCAGACCACTTATGCTTTTTTTTCTTTTTCTTTTTTAAATTAGTCTCTCTACTTTTCCTTCATAATTTTGCTACTTGTTAAACAACTTCCATCTATAAATCCCCTACCCATTTGCAAACTCAGCTCATTTACCCAACTTTCCCACCTCTGACAATCATTTTCTTTCCCCATTTTCCTGGAATCCAAACACCCCAAGAGAGAAAGAAAACAATGGTTTCACCACCATCACCCTCCATAGAACCAATTTCTAGTCCTCGGATATCCTTCTCTTCTGAGTTTCTTGATGAAAGCAACTTCATTTCCATCACTCCTAATTCTCAGATATTGAGAGATCAAGAAGTTTGTGAGAGACAAAGCAAGGAGAGATCAGAGAAGCTGAAATGGAGTGCTGATTTTGAGTTTCTTTCTAATAAAGTTAGCAGTCACTCCATGATTGCGGCCGACGAGCTTTTCTTTGAAGGGAAGCTTCTTCCCTTTTGGCAAATGCAGCAAGCGGAGAGGCTTAACAAAATCAGCCTCAAATCTCCTGAAGAGAACTTGGGGAAGATAGAGGTAAACAAGGAAGCAGAGAACCAAGTGAATTGGTTCCTCGATGACGATCCGTCTCCCAGACCGCCAAAATGCACGGTTCTTTGGAAAGAATTGTTGAGGTTGAAGAAGCAACGCTCCTCGTCTGCGCTATCACCATCTTCTTCTTCATCCTCGTCGTCATCGTTGTCTTCTTCCAGGTCCATGGCTGATGCAGCCACGACAGAGGAAGGCAAGGAAGGGACAACGGGAAACAAAGAGAAAACCATAAAGAGGATAAAGAAGGGTTTGGAAAGGACAAGATCAGCCAATCTAAGAATAAGGCCTATGATTAATGTGGCAATCTGCACACAGGTGAAGAGCAGTGTTTTGCCACCCTTGTTCCCACTTAAGAAAGGAAGACTTGATAGATGAGAAGATGAATACAGTACTAAAGTCAGCAGCGCTCAAGATCTCATCATGTCTACCCCAACGTGTTAATCTCTCTCTATTGCCTCATTTATTGACAAAATTTTCAACTTTCTTTCTTCCTGAGTTGTATGGATTAATGTGTTGATTATGGCAGTGGATCTAATAATCTACAATTGTAAATGCTGACCTCTATTTTTTGTCTGTTGCTATTCCTTGATTAATCGCATTATGCTTCTTTGCTTCGTCATAACTTTTGGTGTACACTTTATCTTTTGTCCTCCTAAATAGCAAAATTTGGCAGTAAACAGTTTAATGTCACATGCTGGGTGCAGCAGCCTCGGATTGGTGGGTC

Coding sequence (CDS)

ATGGTTTCACCACCATCACCCTCCATAGAACCAATTTCTAGTCCTCGGATATCCTTCTCTTCTGAGTTTCTTGATGAAAGCAACTTCATTTCCATCACTCCTAATTCTCAGATATTGAGAGATCAAGAAGTTTGTGAGAGACAAAGCAAGGAGAGATCAGAGAAGCTGAAATGGAGTGCTGATTTTGAGTTTCTTTCTAATAAAGTTAGCAGTCACTCCATGATTGCGGCCGACGAGCTTTTCTTTGAAGGGAAGCTTCTTCCCTTTTGGCAAATGCAGCAAGCGGAGAGGCTTAACAAAATCAGCCTCAAATCTCCTGAAGAGAACTTGGGGAAGATAGAGGTAAACAAGGAAGCAGAGAACCAAGTGAATTGGTTCCTCGATGACGATCCGTCTCCCAGACCGCCAAAATGCACGGTTCTTTGGAAAGAATTGTTGAGGTTGAAGAAGCAACGCTCCTCGTCTGCGCTATCACCATCTTCTTCTTCATCCTCGTCGTCATCGTTGTCTTCTTCCAGGTCCATGGCTGATGCAGCCACGACAGAGGAAGGCAAGGAAGGGACAACGGGAAACAAAGAGAAAACCATAAAGAGGATAAAGAAGGGTTTGGAAAGGACAAGATCAGCCAATCTAAGAATAAGGCCTATGATTAATGTGGCAATCTGCACACAGGTGAAGAGCAGTGTTTTGCCACCCTTGTTCCCACTTAAGAAAGGAAGACTTGATAGATGA

Protein sequence

MVSPPSPSIEPISSPRISFSSEFLDESNFISITPNSQILRDQEVCERQSKERSEKLKWSADFEFLSNKVSSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSPEENLGKIEVNKEAENQVNWFLDDDPSPRPPKCTVLWKELLRLKKQRSSSALSPSSSSSSSSSLSSSRSMADAATTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINVAICTQVKSSVLPPLFPLKKGRLDR

Homology

[Close]

BLAST of Sed0012211 vs. NCBI nr
Match: XP_022138704.1 (uncharacterized protein LOC111009802 [Momordica charantia])

HSP 1 Score: 391.7 bits (1005), Expect = 4.5e-105
Identity = 215/244 (88.11%), Postives = 221/244 (90.57%), Query Frame = 0


Query: 4   PPSPSIEPISSPRISFSSEFLDESNFISITPNSQILRDQEVCERQSKERSEKLKWSADFE 63
           PP P  EP SSPRISFSSEFLDESNFISITPNSQI RDQEVCERQ KERSEKL WSADFE
Sbjct: 20  PPPPPTEPNSSPRISFSSEFLDESNFISITPNSQIERDQEVCERQRKERSEKLAWSADFE 79

Query: 64  FLSNKVSSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSP----EENLGKIEVNKEA 123
           FLSNKVSSHSM  ADELFFEGKLLPFWQMQQAERL KISLKSP    EE+L +IEVNKEA
Sbjct: 80  FLSNKVSSHSMTTADELFFEGKLLPFWQMQQAERLGKISLKSPKDVDEEDLVEIEVNKEA 139

Query: 124 ENQVNWFLDDDPSPRPPKCTVLWKELLRLKKQRSSSALSPSSSSSSSSSLSSSRSMADAA 183
           EN+VNWFLDDDPSPRPPKCTVLWKELLRLKKQR+SS LSPSSSSSSSS  SSSRSMAD A
Sbjct: 140 ENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRASSTLSPSSSSSSSS--SSSRSMADVA 199

Query: 184 TTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINVAICTQVKSSVLPPLFPLKKG 243
           TTEEGKEGT GNKEK IKRIKKGLERTRSA++RIRPMINV ICTQVKSSVLPPLFPLKKG
Sbjct: 200 TTEEGKEGTAGNKEKNIKRIKKGLERTRSASIRIRPMINVPICTQVKSSVLPPLFPLKKG 259

[Close]

BLAST of Sed0012211 vs. NCBI nr
Match: XP_004140154.1 (uncharacterized protein LOC101216953 [Cucumis sativus] >KAE8647357.1 hypothetical protein Csa_003743 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 7.7e-105
Identity = 216/245 (88.16%), Postives = 226/245 (92.24%), Query Frame = 0


Query: 3   SPPSPSIEPISSPRISFSSEFLDESNFISITPNSQILRDQEVCERQSKERSEKLKWSADF 62
           S P P+ EP SSPRISFSSEFLDESNFISITPNSQI RDQE+CERQ K+RSEKL WSADF
Sbjct: 19  SSPLPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEICERQKKDRSEKLAWSADF 78

Query: 63  EFLSNKVSSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSP----EENLGKIEVNKE 122
           EFLSNKVSSHSMI ADELFFEGKLLPFWQMQQAERLNKISLKSP    EE+L +IEVNKE
Sbjct: 79  EFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKE 138

Query: 123 AENQVNWFLDDDPSPRPPKCTVLWKELLRLKKQRSSSALSPSSSSSSSSSLSSSRSMADA 182
           AEN+VNWFLDDDPSPRPPKCTVLWKELLRLKKQR+SSALSPSSSSSSSS  SSSRSMADA
Sbjct: 139 AENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSS--SSSRSMADA 198

Query: 183 ATTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINVAICTQVKSSVLPPLFPLKK 242
           ATTEEGKEGTTGNKEK +KRIKK LERTRSA++RIRPMINV ICTQVKSSVLPPLFPLKK
Sbjct: 199 ATTEEGKEGTTGNKEKNVKRIKK-LERTRSASIRIRPMINVPICTQVKSSVLPPLFPLKK 258

Query: 243 GRLDR 244
           GR DR
Sbjct: 259 GRFDR 260

[Close]

BLAST of Sed0012211 vs. NCBI nr
Match: XP_008449565.1 (PREDICTED: uncharacterized protein LOC103491410 [Cucumis melo] >KAA0061706.1 SEY1 [Cucumis melo var. makuwa] >TYK21181.1 SEY1 [Cucumis melo var. makuwa])

HSP 1 Score: 390.2 bits (1001), Expect = 1.3e-104
Identity = 215/245 (87.76%), Postives = 226/245 (92.24%), Query Frame = 0


Query: 3   SPPSPSIEPISSPRISFSSEFLDESNFISITPNSQILRDQEVCERQSKERSEKLKWSADF 62
           S P P+ EP SSPRISFSSEFLDESNFISITPNSQI RDQE+CERQ K+RSEKL WSADF
Sbjct: 19  SSPPPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEICERQKKDRSEKLAWSADF 78

Query: 63  EFLSNKVSSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSP----EENLGKIEVNKE 122
           EFLSNKVSSHSMI ADELFFEGKLLPFWQMQQAERLNKISLKSP    EE+L +IEVNKE
Sbjct: 79  EFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKE 138

Query: 123 AENQVNWFLDDDPSPRPPKCTVLWKELLRLKKQRSSSALSPSSSSSSSSSLSSSRSMADA 182
           AEN+VNWFLDDDPSPRPPKCTVLWKELLRLKKQR+SSALSPSSSSSSSS  SSSRSMADA
Sbjct: 139 AENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSS--SSSRSMADA 198

Query: 183 ATTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINVAICTQVKSSVLPPLFPLKK 242
           ATTEEGKEGTTGNKEK ++RIKK LERTRSA++RIRPMINV ICTQVKSSVLPPLFPLKK
Sbjct: 199 ATTEEGKEGTTGNKEKNVRRIKK-LERTRSASIRIRPMINVPICTQVKSSVLPPLFPLKK 258

Query: 243 GRLDR 244
           GR DR
Sbjct: 259 GRFDR 260

[Close]

BLAST of Sed0012211 vs. NCBI nr
Match: XP_038876013.1 (uncharacterized protein LOC120068347 [Benincasa hispida])

HSP 1 Score: 387.9 bits (995), Expect = 6.5e-104
Identity = 215/247 (87.04%), Postives = 228/247 (92.31%), Query Frame = 0


Query: 3   SPPSPSIEPISSPRISFSSEFLDESNFISITPNSQILRDQEVCERQ--SKERSEKLKWSA 62
           S PSP+ EP SSPRISFSSEFLDESNFISITPNSQI RDQE+C+RQ   K+RSEKL WSA
Sbjct: 16  SSPSPT-EPNSSPRISFSSEFLDESNFISITPNSQIERDQEICDRQKKDKDRSEKLAWSA 75

Query: 63  DFEFLSNKVSSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSP----EENLGKIEVN 122
           DFEFLSNKVSSHSMI ADELFFEGKLLPFWQMQQAERLNKISLKSP    EE++ +IEVN
Sbjct: 76  DFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDMVEIEVN 135

Query: 123 KEAENQVNWFLDDDPSPRPPKCTVLWKELLRLKKQRSSSALSPSSSSSSSSSLSSSRSMA 182
           KEA+N+VNWFLDDDPSPRPPKCTVLWKELLRLKKQR+SSALSPSSSSSSSS  SSSRSMA
Sbjct: 136 KEADNKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSS--SSSRSMA 195

Query: 183 DAATTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINVAICTQVKSSVLPPLFPL 242
           DAATTEEGKEGTTGNKEK +KRIKKGLERTRSA++RIRPMINV ICTQVKSSVLPPLFPL
Sbjct: 196 DAATTEEGKEGTTGNKEKNVKRIKKGLERTRSASIRIRPMINVPICTQVKSSVLPPLFPL 255

Query: 243 KKGRLDR 244
           KKGR DR
Sbjct: 256 KKGRFDR 259

[Close]

BLAST of Sed0012211 vs. NCBI nr
Match: XP_022930387.1 (uncharacterized protein LOC111436849 [Cucurbita moschata] >XP_023000022.1 uncharacterized protein LOC111494331 [Cucurbita maxima] >XP_023513461.1 uncharacterized protein LOC111778063 [Cucurbita pepo subsp. pepo] >KAG7026246.1 hypothetical protein SDJN02_12745, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381.7 bits (979), Expect = 4.7e-102
Identity = 213/245 (86.94%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 3   SPPSPSIEPISSPRISFSSEFLDESNFISITPNSQILRDQEVCERQSKERSEKLKWSADF 62
           SPPS SIEP SSPRISFSSEFLDESNFISITP+SQI RDQE+CERQ KERSE+L  SADF
Sbjct: 10  SPPSSSIEPNSSPRISFSSEFLDESNFISITPHSQIERDQEICERQKKERSERLARSADF 69

Query: 63  EFLSNKVSSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSP----EENLGKIEVNKE 122
           EFLSN+VSSHSM+ ADELFFEGKLLPFWQMQQAERLNKISLKSP    EE+L +IEVNKE
Sbjct: 70  EFLSNQVSSHSMLTADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKE 129

Query: 123 AENQVNWFLDDDPSPRPPKCTVLWKELLRLKKQRSSSALSPSSSSSSSSSLSSSRSMADA 182
           AEN+VNWFLDDDPSPRPPKCTVLWKELLRLKKQR+SSALSPSSSSSSSS  SSSRSMADA
Sbjct: 130 AENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRTSSALSPSSSSSSSS--SSSRSMADA 189

Query: 183 ATTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINVAICTQVKSSVLPPLFPLKK 242
           AT+E   EGTTGNKEK IKRIKKGLERTRSA++RIRPMINV ICTQVKSSVLPPLFPLKK
Sbjct: 190 ATSE---EGTTGNKEKNIKRIKKGLERTRSASIRIRPMINVPICTQVKSSVLPPLFPLKK 249

Query: 243 GRLDR 244
           GR DR
Sbjct: 250 GRFDR 249

[Close]

BLAST of Sed0012211 vs. ExPASy TrEMBL
Match: A0A6J1CAV2 (uncharacterized protein LOC111009802 OS=Momordica charantia OX=3673 GN=LOC111009802 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.2e-105
Identity = 215/244 (88.11%), Postives = 221/244 (90.57%), Query Frame = 0


Query: 4   PPSPSIEPISSPRISFSSEFLDESNFISITPNSQILRDQEVCERQSKERSEKLKWSADFE 63
           PP P  EP SSPRISFSSEFLDESNFISITPNSQI RDQEVCERQ KERSEKL WSADFE
Sbjct: 20  PPPPPTEPNSSPRISFSSEFLDESNFISITPNSQIERDQEVCERQRKERSEKLAWSADFE 79

Query: 64  FLSNKVSSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSP----EENLGKIEVNKEA 123
           FLSNKVSSHSM  ADELFFEGKLLPFWQMQQAERL KISLKSP    EE+L +IEVNKEA
Sbjct: 80  FLSNKVSSHSMTTADELFFEGKLLPFWQMQQAERLGKISLKSPKDVDEEDLVEIEVNKEA 139

Query: 124 ENQVNWFLDDDPSPRPPKCTVLWKELLRLKKQRSSSALSPSSSSSSSSSLSSSRSMADAA 183
           EN+VNWFLDDDPSPRPPKCTVLWKELLRLKKQR+SS LSPSSSSSSSS  SSSRSMAD A
Sbjct: 140 ENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRASSTLSPSSSSSSSS--SSSRSMADVA 199

Query: 184 TTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINVAICTQVKSSVLPPLFPLKKG 243
           TTEEGKEGT GNKEK IKRIKKGLERTRSA++RIRPMINV ICTQVKSSVLPPLFPLKKG
Sbjct: 200 TTEEGKEGTAGNKEKNIKRIKKGLERTRSASIRIRPMINVPICTQVKSSVLPPLFPLKKG 259

[Close]

BLAST of Sed0012211 vs. ExPASy TrEMBL
Match: A0A5D3DC08 (SEY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00530 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.3e-105
Identity = 215/245 (87.76%), Postives = 226/245 (92.24%), Query Frame = 0


Query: 3   SPPSPSIEPISSPRISFSSEFLDESNFISITPNSQILRDQEVCERQSKERSEKLKWSADF 62
           S P P+ EP SSPRISFSSEFLDESNFISITPNSQI RDQE+CERQ K+RSEKL WSADF
Sbjct: 19  SSPPPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEICERQKKDRSEKLAWSADF 78

Query: 63  EFLSNKVSSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSP----EENLGKIEVNKE 122
           EFLSNKVSSHSMI ADELFFEGKLLPFWQMQQAERLNKISLKSP    EE+L +IEVNKE
Sbjct: 79  EFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKE 138

Query: 123 AENQVNWFLDDDPSPRPPKCTVLWKELLRLKKQRSSSALSPSSSSSSSSSLSSSRSMADA 182
           AEN+VNWFLDDDPSPRPPKCTVLWKELLRLKKQR+SSALSPSSSSSSSS  SSSRSMADA
Sbjct: 139 AENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSS--SSSRSMADA 198

Query: 183 ATTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINVAICTQVKSSVLPPLFPLKK 242
           ATTEEGKEGTTGNKEK ++RIKK LERTRSA++RIRPMINV ICTQVKSSVLPPLFPLKK
Sbjct: 199 ATTEEGKEGTTGNKEKNVRRIKK-LERTRSASIRIRPMINVPICTQVKSSVLPPLFPLKK 258

Query: 243 GRLDR 244
           GR DR
Sbjct: 259 GRFDR 260

[Close]

BLAST of Sed0012211 vs. ExPASy TrEMBL
Match: A0A1S3BMY8 (uncharacterized protein LOC103491410 OS=Cucumis melo OX=3656 GN=LOC103491410 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.3e-105
Identity = 215/245 (87.76%), Postives = 226/245 (92.24%), Query Frame = 0


Query: 3   SPPSPSIEPISSPRISFSSEFLDESNFISITPNSQILRDQEVCERQSKERSEKLKWSADF 62
           S P P+ EP SSPRISFSSEFLDESNFISITPNSQI RDQE+CERQ K+RSEKL WSADF
Sbjct: 19  SSPPPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEICERQKKDRSEKLAWSADF 78

Query: 63  EFLSNKVSSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSP----EENLGKIEVNKE 122
           EFLSNKVSSHSMI ADELFFEGKLLPFWQMQQAERLNKISLKSP    EE+L +IEVNKE
Sbjct: 79  EFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKE 138

Query: 123 AENQVNWFLDDDPSPRPPKCTVLWKELLRLKKQRSSSALSPSSSSSSSSSLSSSRSMADA 182
           AEN+VNWFLDDDPSPRPPKCTVLWKELLRLKKQR+SSALSPSSSSSSSS  SSSRSMADA
Sbjct: 139 AENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSS--SSSRSMADA 198

Query: 183 ATTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINVAICTQVKSSVLPPLFPLKK 242
           ATTEEGKEGTTGNKEK ++RIKK LERTRSA++RIRPMINV ICTQVKSSVLPPLFPLKK
Sbjct: 199 ATTEEGKEGTTGNKEKNVRRIKK-LERTRSASIRIRPMINVPICTQVKSSVLPPLFPLKK 258

Query: 243 GRLDR 244
           GR DR
Sbjct: 259 GRFDR 260

[Close]

BLAST of Sed0012211 vs. ExPASy TrEMBL
Match: A0A6J1KCD5 (uncharacterized protein LOC111494331 OS=Cucurbita maxima OX=3661 GN=LOC111494331 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.3e-102
Identity = 213/245 (86.94%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 3   SPPSPSIEPISSPRISFSSEFLDESNFISITPNSQILRDQEVCERQSKERSEKLKWSADF 62
           SPPS SIEP SSPRISFSSEFLDESNFISITP+SQI RDQE+CERQ KERSE+L  SADF
Sbjct: 10  SPPSSSIEPNSSPRISFSSEFLDESNFISITPHSQIERDQEICERQKKERSERLARSADF 69

Query: 63  EFLSNKVSSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSP----EENLGKIEVNKE 122
           EFLSN+VSSHSM+ ADELFFEGKLLPFWQMQQAERLNKISLKSP    EE+L +IEVNKE
Sbjct: 70  EFLSNQVSSHSMLTADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKE 129

Query: 123 AENQVNWFLDDDPSPRPPKCTVLWKELLRLKKQRSSSALSPSSSSSSSSSLSSSRSMADA 182
           AEN+VNWFLDDDPSPRPPKCTVLWKELLRLKKQR+SSALSPSSSSSSSS  SSSRSMADA
Sbjct: 130 AENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRTSSALSPSSSSSSSS--SSSRSMADA 189

Query: 183 ATTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINVAICTQVKSSVLPPLFPLKK 242
           AT+E   EGTTGNKEK IKRIKKGLERTRSA++RIRPMINV ICTQVKSSVLPPLFPLKK
Sbjct: 190 ATSE---EGTTGNKEKNIKRIKKGLERTRSASIRIRPMINVPICTQVKSSVLPPLFPLKK 249

Query: 243 GRLDR 244
           GR DR
Sbjct: 250 GRFDR 249

[Close]

BLAST of Sed0012211 vs. ExPASy TrEMBL
Match: A0A6J1EQC3 (uncharacterized protein LOC111436849 OS=Cucurbita moschata OX=3662 GN=LOC111436849 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.3e-102
Identity = 213/245 (86.94%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 3   SPPSPSIEPISSPRISFSSEFLDESNFISITPNSQILRDQEVCERQSKERSEKLKWSADF 62
           SPPS SIEP SSPRISFSSEFLDESNFISITP+SQI RDQE+CERQ KERSE+L  SADF
Sbjct: 10  SPPSSSIEPNSSPRISFSSEFLDESNFISITPHSQIERDQEICERQKKERSERLARSADF 69

Query: 63  EFLSNKVSSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSP----EENLGKIEVNKE 122
           EFLSN+VSSHSM+ ADELFFEGKLLPFWQMQQAERLNKISLKSP    EE+L +IEVNKE
Sbjct: 70  EFLSNQVSSHSMLTADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKE 129

Query: 123 AENQVNWFLDDDPSPRPPKCTVLWKELLRLKKQRSSSALSPSSSSSSSSSLSSSRSMADA 182
           AEN+VNWFLDDDPSPRPPKCTVLWKELLRLKKQR+SSALSPSSSSSSSS  SSSRSMADA
Sbjct: 130 AENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRTSSALSPSSSSSSSS--SSSRSMADA 189

Query: 183 ATTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINVAICTQVKSSVLPPLFPLKK 242
           AT+E   EGTTGNKEK IKRIKKGLERTRSA++RIRPMINV ICTQVKSSVLPPLFPLKK
Sbjct: 190 ATSE---EGTTGNKEKNIKRIKKGLERTRSASIRIRPMINVPICTQVKSSVLPPLFPLKK 249

Query: 243 GRLDR 244
           GR DR
Sbjct: 250 GRFDR 249

[Close]

BLAST of Sed0012211 vs. TAIR 10
Match: AT3G05980.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). )

HSP 1 Score: 196.1 bits (497), Expect = 3.4e-50
Identity = 136/251 (54.18%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 11  PISSPRISFSSEFLDESNFISITPNSQILRDQEVCERQSKERSEKLKWSADFEFLSNK-V 70
           P+  PRISFSS+  D  +FI ITP         +C+    + S K+   +DFEFLS++ V
Sbjct: 13  PLLGPRISFSSDLSDGGDFICITP--------VMCKEDVVKGSVKV---SDFEFLSSENV 72

Query: 71  SSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSPEENLG---KIEVNKE------AE 130
           S   M+ ADELF EGKLLPFWQ++ +E+L  I+LK+ EE      K+EV K+       +
Sbjct: 73  SPQRMLTADELFSEGKLLPFWQVKHSEKLKNITLKTNEEEEAEKRKVEVKKKDQEINNRD 132

Query: 131 NQVNWFLDDDPSPRPPKCTVLWKELLRLKKQRSSSALSP-----SSSSSSSSSLSSSRSM 190
           N+V WF+D+DPSPRPPKCTVLWKELLRLKKQR+ S+ SP      SS S SSS SSS S+
Sbjct: 133 NRVTWFIDEDPSPRPPKCTVLWKELLRLKKQRNPSS-SPVTARTVSSLSPSSSTSSSSSL 192

Query: 191 ADAATTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINVAICTQVKSSV-LPPLF 244
            DAA  EE        KEK  KR KKGLERTRSA++RIRPMI+V ICT  KSS+ LPPLF
Sbjct: 193 EDAAKREE--------KEKEGKRGKKGLERTRSASMRIRPMIHVPICTPSKSSLPLPPLF 243

[Close]

BLAST of Sed0012211 vs. TAIR 10
Match: AT5G19340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits to 906 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other Eukaryotes - 766 (source: NCBI BLink). )

HSP 1 Score: 172.6 bits (436), Expect = 4.0e-43
Identity = 127/267 (47.57%), Postives = 160/267 (59.93%), Query Frame = 0


Query: 13  SSPRISFSSEFL---DESNFISITPNSQILRDQEVCERQSKERSEKLKWSADFEFLSNKV 72
           + PRISFS++      + +FI I P   ++  +E  ++ S +       + DFEFLS   
Sbjct: 17  TGPRISFSADLSSSDSDGDFICINPVMNLIVGREEKDKSSVK-------AGDFEFLSENA 76

Query: 73  SSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSPEE-----------NLGKIEVNKE 132
              +M++ADELF EGKLLPFWQ++ +E+L  ++LK   E           N      NKE
Sbjct: 77  ---TMLSADELFSEGKLLPFWQVKHSEKLKNVTLKPKVEVQQEEEDHKVVNEEGFVHNKE 136

Query: 133 AENQVN----------WFLDDDPSPRPPKCTVLWKELLRLKKQRSS---------SALSP 192
            EN  N          WFLDDDPSPRPPKCTVLWKELLRLKKQR++         S+LSP
Sbjct: 137 QENNNNNNNNNNNRGSWFLDDDPSPRPPKCTVLWKELLRLKKQRTTTTTTASTRVSSLSP 196

Query: 193 SSSSSSSSSLSSSRSMADAATTEEGKEGTTGNKEKTIKRIKKGLERTRSANLRIRPMINV 244
           SSSSSS+S  SSS S+ DA   EE        +EK  KR KKGLERTRS  +RIRPMI+V
Sbjct: 197 SSSSSSTS--SSSSSIGDAVKKEE--------REKEGKRGKKGLERTRSVTMRIRPMIHV 256

[Close]

BLAST of Sed0012211 vs. TAIR 10
Match: AT5G66800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 8.7e-06
Identity = 47/143 (32.87%), Postives = 67/143 (46.85%), Query Frame = 0


Query: 14  SPRISFSSEFLDESNFISITPNSQILRDQEVCERQSKERSEKLKWSADFEFLSNKVSSHS 73
           SPRISFS++F++     + T  S  L         SK+      +S +FEF    VS+++
Sbjct: 18  SPRISFSNDFVEIRPETTKTTRSSPL---------SKQEGSSSSFSDNFEF---SVSNYT 77

Query: 74  MIAADELFFEGKLLPFWQMQQAER-LNKISLKSPEENLGKIEVNKEAENQVNWFLDDDPS 133
           M+ ADELF +GKLLPF +  Q +R L +  L   +E  G  +       +   F     S
Sbjct: 78  MMPADELFSKGKLLPFKETNQVQRTLREELLVEEDEEEGPRDATNIFSLKPPIFSSSSSS 137

Query: 134 PRPPKCTVLWKELLRLKKQRSSS 156
               K    WK LL LK+    S
Sbjct: 138 SSSSKGR--WKGLLGLKRAHVGS 146

[Close]

BLAST of Sed0012211 vs. TAIR 10
Match: AT3G12970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56020.1); Has 2408 Blast hits to 418 proteins in 91 species: Archae - 0; Bacteria - 41; Metazoa - 198; Fungi - 63; Plants - 125; Viruses - 13; Other Eukaryotes - 1968 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 4.8e-04
Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 61  DFEFLSNKVSSHSMIAADELFFEGKLLPFWQMQQAERLNKISLKSPEEN------LGKIE 120
           DFEFL       +M++ADELF +GKL+P         L    +  PEE          ++
Sbjct: 43  DFEFLLE--DPVTMLSADELFSDGKLVP---------LKFSGVTYPEEKPITSVVHTAVK 102

Query: 121 VNKEAENQVNWFLDDDP-SPRPPKCTVLWKELLRLKKQRSSSALSPSSSSSSSSSLSSS 173
             +  E +++  +D    SPR P+CTV W+ELL LK+   +      +S+SSSS LSSS
Sbjct: 103 PCRRLEMEISGVVDPYLFSPRAPRCTVRWRELLGLKRLAKT---QQEASASSSSRLSSS 147

The following BLAST results are available for this feature:

BLAST of Sed0012211 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138704.1	4.5e-105	88.11	uncharacterized protein LOC111009802 [Momordica charantia]	[more]
XP_004140154.1	7.7e-105	88.16	uncharacterized protein LOC101216953 [Cucumis sativus] >KAE8647357.1 hypothetica...	[more]
XP_008449565.1	1.3e-104	87.76	PREDICTED: uncharacterized protein LOC103491410 [Cucumis melo] >KAA0061706.1 SEY...	[more]
XP_038876013.1	6.5e-104	87.04	uncharacterized protein LOC120068347 [Benincasa hispida]	[more]
XP_022930387.1	4.7e-102	86.94	uncharacterized protein LOC111436849 [Cucurbita moschata] >XP_023000022.1 unchar...	[more]

BLAST of Sed0012211 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0012211 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAV2	2.2e-105	88.11	uncharacterized protein LOC111009802 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A5D3DC08	6.3e-105	87.76	SEY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00530 PE=4 SV...	[more]
A0A1S3BMY8	6.3e-105	87.76	uncharacterized protein LOC103491410 OS=Cucumis melo OX=3656 GN=LOC103491410 PE=...	[more]
A0A6J1KCD5	2.3e-102	86.94	uncharacterized protein LOC111494331 OS=Cucurbita maxima OX=3661 GN=LOC111494331...	[more]
A0A6J1EQC3	2.3e-102	86.94	uncharacterized protein LOC111436849 OS=Cucurbita moschata OX=3662 GN=LOC1114368...	[more]

BLAST of Sed0012211 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05980.1	3.4e-50	54.18	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G19340.1	4.0e-43	47.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G66800.1	8.7e-06	32.87	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G12970.1	4.8e-04	36.13	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..201
None	No IPR available	PANTHER	PTHR31722	OS06G0675200 PROTEIN	coord: 6..243
None	No IPR available	PANTHER	PTHR31722:SF2	HISTONE-LYSINE N-METHYLTRANSFERASE SETD1A-LIKE	coord: 6..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012211.1	Sed0012211.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity