Sed0012175 (gene) Chayote v1

Overview


Name	Sed0012175
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-H2 finger protein ATL16-like
Location	LG05: 629663 .. 633211 (-)
RNA-Seq Expression	Sed0012175
Synteny	Sed0012175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGATCGAGATTCAGTTCAGTTACCCCTTATCTTCTTCATCTTCTTCAACACAGGCGGACAATTCAATTCTCGAAGGACCAAAAATGGCGGCTAATTAACCCGAAACCCTAAACCAGCTCACTCGACCAATCTTTTTCTTCTTCCTCTTCAACTTCCCTCAATGAGATCGGCCACATTTCCAACAACCCATTGCCCTTACTTCATGCTTCCCATTCATGGATTCGGCTCTTCCACCACGAAGAAATCCATTCTTTTCTTCACTCCCTGTAAATTCAAACCCACTTTCTTGAATTTACGGGCCAAACCATCCCGGTTGCCGTTTCTTCTTCTCTGTTATGGAGATTCCGGGAAATCTGCCAGGGAAGAACAGTCTGTGGGGGTCGAAGATTTGGATGGGAATTTGATGGAGGAAAAAACAGAGCAAAATCAATGGGTTGTTGAAGTGGGCAGCCCTAGTCTTGGATTTCGCCCTTTCGCCAAATTGAGCTTGAGCGACAAGGCTTTTCTTCTCTTGACATTCATTGCCCTAACGGTAAATTATGCTGTAATCTGATTTTATCGACATTTAAATTCTCTCTATTTGTTGTGTGTTTGTATTTGGGTTTCTATGAGTTCTTGCTGTTATTGACTGTGGCCCTCAAGAATGCTGGTTTTATGATACTATAATATCTTGCCGGTTCTTCAATGGTTCTCCTTACAACTTTTGACTATCATTGTTTGTTGATATAATTATATTTTCTCCGACCCATTCGCTTAAATTTTTTGGTTGATTGGTGATTTAACTTGATTCTATATGGTATCTCACCGGAGGTCATTTGTCCAAACTCTTGTCAAGTCGTTTCTGTTAATTGATATAATTAAATTTATACCAACCAATGAACTTAAACTTTTGGGTTGATGGGTGATTTAAGATGATTCAACGATTACTAATGCTAACTAACAAAACAATTTATATCTGATTGTAGAGAATCAGAGATGTTGAGATTCCATAAAAAATGAAAAATAAAGATTCTAGAGATGCTATCTTTTAACAGAATAAAATAATATAGATATAAAGAGCACAAACAAAAAACAATATAATCGTATTCTCATAGCTGATCATTTCTATCTGTTTTTTTCTCCTTCTAAAGTACATATAGTTTGAGATGGAGAGAAAAATTCTCAGGTGTCGTAGGCATGTTTTCGTTGAAGTTCGAGTAGCTCGACGAGGTTTAAGTTCCATAGATGAACCTCTGCATCATCTCTTATTGCAAAATCCAGAGTTGAGCTCTACTTGGGGATTTTAGTTATCTCCTTGTAGTAGAGTTGGTCATTTTATACTGTTTATCTATTATGCTATGTCTGAATTGTGCCATAAAGACCAACTTTCACATATTTTAAGAAGTTATTTTGTCACTGTGCATTTGCATAAACATTGATTAGTGTTAATTGATGCAGACTTCAGTGGCATTTACAAGCCTTGTCATCGCAGCTGTGCCAACACTTAATGTAAGTTCATAGATAACTATTTTAAGCTGATATTAGTATCAGGCGCATATTTGCACTATTTGTTTTTATCCATGTATTTTTTCTCTTTATACAAATCCACATAATTAGTCAAGAAAGTCCATGGTTTAACTAGACAATTCGGACATAACATACTATATAATGTTATAAAGTACGTATTTGAGAGACTTAACTTTCTATAAATGAAATTTAGGCAATGCGTAAAGCTGCCATTTCACTTTCAAAGCTAGCCGACACAGCTCGTGAAGAACTTCCTGGTACAATGGCTGCAGTTAGACTTTCTGGCATGGAAATTAGTGATCTAACTCTTGAACTAAGCGATCTAAGGTGAGAACAAATCCTTATGTAGGGCCATCTCTCCTTATTGATGGTTTTGTCGTTTATGGTTAAGAATACATTTGTATTTGTTTTGGGACGAGCATTGTCTTCTATGAAATGCTGGGTCTTTTTTTTTTGGTAAATCTTTAGAATACTTGGTAGAGAAGTAGGAAGATTTTTAAGGGTATTGAGGAAACCTGGGACCATGTTTAGGATGTAGCTCACTTTAATACTTTCCTTTACATCCACATTTTCTAATCACACTGTCTATTTTGGGAAAATTTTGTGAGAGCCTTCTGGTGGATCGTATGGAAAGAAAGCAATGGCAGAATCTTTAAAAATCAGCGCTAACTATACTTGAACTTCATTGAAAACTTGATTTCGATTGTGGTATCCTGGTGCAAACTCTCCCCCCTTTTCTATGATTATAGCTTTGATATCCTTATTAATAACTGGATGTCCTTTTTGTAATTAGCCTTGTGCCCTGTTGAAATTTCTGATAAGAACCGATCTTTATTACGATATCGAAATAATGGAATTACAAGATAAACCAAGTTTAAGGTACTTAGACCCTTCTATTCTTGAGATCAATCAAGACCCAAACCAAAATGATCTAAACATTTTATACCTTTCCCACTACCACACCCTCTATTTATAACCAAATTCTATAACAAACTCTCTAACTAATCACCCATATACCACTACATTAATCCTAATTCTTCTAAATGCCTAACCCTATCATTTACCTTAAACTTGGTTTATCTTGTAATTTCATTATTTCGATATCGTAATAGAGATCGGTTTTTATCAATTTCATAATTATAATGAAATTATTTCTTATCAAAAAAAAAAAAAAAAATCAGTCTTTTTATCAAAGTGGACAGAGTGGTTCCATTACTTGGTTTTGACTTGTGTTTGTGAATGACTTTCTTTTGATTGTATTCTCAATTCCTTATAATAGATGTAGTTTATAAGAAATAGTAAAGATGTCTATCATGGCTGATGGCTTGTTTCTTGTATCATCTTCTCACCTTTTCTGTATGATTCCAACTCTTCTGAGCAATCCGTCTCGATTCTGTTTTGATCACAGTCAGGAGATAAGTGATGGGGTAAACAAATCTGCCCAGGCTGTCCAAGCAGCAGAAGCTGGAATTCGACAGATCGGTGCACTTGCCCAGCAGCAAACTATGTGTATGTTTGACTACTAGCACTATAAGATAACTTATTGTACACATTCTTATAACTAATCACCAGAGCTTAACGACTTATATTTATGTTCTGCATGATACAGCAATGATTCAAGAGAGAGCAAGCCTGCCCATTATTTCTTTGCAGCCTGTAGTTGCTGGAGCTGCAAAGAAGACTTCTCGAGCGGTTGGCAAAGCTACACGAACGATCATGAAAATGATTTCAGGATCAGGAGGAGAAAGTTCGGACAATGATGATAATAGTTTAGATAGACTGGAAGTTTAAGTTACTGGTTCCTTGCTTGAAATCAAAATAATGGTGTAAATATCAGTAGTGTAGAAGATCCTGTACTTGTTGATACAAAGTCCTGAAACACGTTGGAAATTCAAAACTGGAAAATTTTCAAAGAAAGACCTGTAAATCAGCTTTATTTTTTACCCACTTGCTTCCAGGCCTGTGAAGGCAATGCCAGTTTGTTCTGGGTCTGTGTAGACTAGTGCCTAAAATGATAATCTACCATTTTATGTAGTGGGC

mRNA sequence

AAAAGATCGAGATTCAGTTCAGTTACCCCTTATCTTCTTCATCTTCTTCAACACAGGCGGACAATTCAATTCTCGAAGGACCAAAAATGGCGGCTAATTAACCCGAAACCCTAAACCAGCTCACTCGACCAATCTTTTTCTTCTTCCTCTTCAACTTCCCTCAATGAGATCGGCCACATTTCCAACAACCCATTGCCCTTACTTCATGCTTCCCATTCATGGATTCGGCTCTTCCACCACGAAGAAATCCATTCTTTTCTTCACTCCCTGTAAATTCAAACCCACTTTCTTGAATTTACGGGCCAAACCATCCCGGTTGCCGTTTCTTCTTCTCTGTTATGGAGATTCCGGGAAATCTGCCAGGGAAGAACAGTCTGTGGGGGTCGAAGATTTGGATGGGAATTTGATGGAGGAAAAAACAGAGCAAAATCAATGGGTTGTTGAAGTGGGCAGCCCTAGTCTTGGATTTCGCCCTTTCGCCAAATTGAGCTTGAGCGACAAGGCTTTTCTTCTCTTGACATTCATTGCCCTAACGACTTCAGTGGCATTTACAAGCCTTGTCATCGCAGCTGTGCCAACACTTAATGCAATGCGTAAAGCTGCCATTTCACTTTCAAAGCTAGCCGACACAGCTCGTGAAGAACTTCCTGGTACAATGGCTGCAGTTAGACTTTCTGGCATGGAAATTAGTGATCTAACTCTTGAACTAAGCGATCTAAGTCAGGAGATAAGTGATGGGGTAAACAAATCTGCCCAGGCTGTCCAAGCAGCAGAAGCTGGAATTCGACAGATCGGTGCACTTGCCCAGCAGCAAACTATGTCAATGATTCAAGAGAGAGCAAGCCTGCCCATTATTTCTTTGCAGCCTGTAGTTGCTGGAGCTGCAAAGAAGACTTCTCGAGCGGTTGGCAAAGCTACACGAACGATCATGAAAATGATTTCAGGATCAGGAGGAGAAAGTTCGGACAATGATGATAATAGTTTAGATAGACTGGAAGTTTAAGTTACTGGTTCCTTGCTTGAAATCAAAATAATGGTGTAAATATCAGTAGTGTAGAAGATCCTGTACTTGTTGATACAAAGTCCTGAAACACGTTGGAAATTCAAAACTGGAAAATTTTCAAAGAAAGACCTGTAAATCAGCTTTATTTTTTACCCACTTGCTTCCAGGCCTGTGAAGGCAATGCCAGTTTGTTCTGGGTCTGTGTAGACTAGTGCCTAAAATGATAATCTACCATTTTATGTAGTGGGC

Coding sequence (CDS)

ATGAGATCGGCCACATTTCCAACAACCCATTGCCCTTACTTCATGCTTCCCATTCATGGATTCGGCTCTTCCACCACGAAGAAATCCATTCTTTTCTTCACTCCCTGTAAATTCAAACCCACTTTCTTGAATTTACGGGCCAAACCATCCCGGTTGCCGTTTCTTCTTCTCTGTTATGGAGATTCCGGGAAATCTGCCAGGGAAGAACAGTCTGTGGGGGTCGAAGATTTGGATGGGAATTTGATGGAGGAAAAAACAGAGCAAAATCAATGGGTTGTTGAAGTGGGCAGCCCTAGTCTTGGATTTCGCCCTTTCGCCAAATTGAGCTTGAGCGACAAGGCTTTTCTTCTCTTGACATTCATTGCCCTAACGACTTCAGTGGCATTTACAAGCCTTGTCATCGCAGCTGTGCCAACACTTAATGCAATGCGTAAAGCTGCCATTTCACTTTCAAAGCTAGCCGACACAGCTCGTGAAGAACTTCCTGGTACAATGGCTGCAGTTAGACTTTCTGGCATGGAAATTAGTGATCTAACTCTTGAACTAAGCGATCTAAGTCAGGAGATAAGTGATGGGGTAAACAAATCTGCCCAGGCTGTCCAAGCAGCAGAAGCTGGAATTCGACAGATCGGTGCACTTGCCCAGCAGCAAACTATGTCAATGATTCAAGAGAGAGCAAGCCTGCCCATTATTTCTTTGCAGCCTGTAGTTGCTGGAGCTGCAAAGAAGACTTCTCGAGCGGTTGGCAAAGCTACACGAACGATCATGAAAATGATTTCAGGATCAGGAGGAGAAAGTTCGGACAATGATGATAATAGTTTAGATAGACTGGAAGTTTAA

Protein sequence

MRSATFPTTHCPYFMLPIHGFGSSTTKKSILFFTPCKFKPTFLNLRAKPSRLPFLLLCYGDSGKSAREEQSVGVEDLDGNLMEEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTFIALTTSVAFTSLVIAAVPTLNAMRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTLELSDLSQEISDGVNKSAQAVQAAEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGAAKKTSRAVGKATRTIMKMISGSGGESSDNDDNSLDRLEV

Homology

[Close]

BLAST of Sed0012175 vs. NCBI nr
Match: XP_022931045.1 (uncharacterized protein LOC111437355 [Cucurbita moschata])

HSP 1 Score: 406.4 bits (1043), Expect = 2.0e-109
Identity = 231/280 (82.50%), Postives = 244/280 (87.14%), Query Frame = 0


Query: 1   MRSATFPTTHCPYFMLPIHGFGSSTTKKSILFFTPCKFKPTFLNLRAKPSRLPFLLLCYG 60
           MRSATF  THCP   LP+HGF SS TK SI+  TPCKF+P   NLRAKP+R  FL+LCY 
Sbjct: 1   MRSATFLKTHCPCVSLPLHGFSSSPTKNSIVSVTPCKFEPFLFNLRAKPAR--FLVLCYR 60

Query: 61  DSGKSAREEQSVGVEDLDGNLMEEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTF 120
           DS KSA E+QSVGVED  G L  E TEQNQW VE+GSPS GF P AKLSLSDKAFLL TF
Sbjct: 61  DSEKSALEQQSVGVEDSSGALTVENTEQNQWSVELGSPSFGFWPLAKLSLSDKAFLLFTF 120

Query: 121 IALTTSVAFTSLVIAAVPTLNAMRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTL 180
           IAL TSVAFTSLVIAAVPT NAMR+AAISLSKLADTAREELPGTMAA+RLSGMEISDLTL
Sbjct: 121 IALATSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTL 180

Query: 181 ELSDLSQEISDGVNKSAQAVQAAEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGA 240
           ELSDLSQEI+DGVNKSAQAVQAAEAGIRQIGALA QQTMSMI+ERASLPIISLQPVV GA
Sbjct: 181 ELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGA 240

Query: 241 AKKTSRAVGKATRTIMKMISGSGGESSDN-DDNSLDRLEV 280
           AKKTSRAVGKATRTIMKMI  SGGES++N DDNSLDRLEV
Sbjct: 241 AKKTSRAVGKATRTIMKMI--SGGESTENDDDNSLDRLEV 276

[Close]

BLAST of Sed0012175 vs. NCBI nr
Match: XP_023533033.1 (uncharacterized protein LOC111795040 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.0 bits (1042), Expect = 2.6e-109
Identity = 229/280 (81.79%), Postives = 245/280 (87.50%), Query Frame = 0


Query: 1   MRSATFPTTHCPYFMLPIHGFGSSTTKKSILFFTPCKFKPTFLNLRAKPSRLPFLLLCYG 60
           MRSATF  THCPY  LP+HGF  S TK S +  TPCKF+P   NLRAKP+R  FL+LCY 
Sbjct: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPAR--FLVLCYR 60

Query: 61  DSGKSAREEQSVGVEDLDGNLMEEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTF 120
           DS KSA E+QS+GVED +G L  E TEQNQW VEVGSPS GF P AKLSL+DKAFLL TF
Sbjct: 61  DSEKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTF 120

Query: 121 IALTTSVAFTSLVIAAVPTLNAMRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTL 180
           IALTTSVAFTSLVIAAVPT NAMR+AAISLSKLADTAREELPGTMAA+RLSGMEISDLTL
Sbjct: 121 IALTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTL 180

Query: 181 ELSDLSQEISDGVNKSAQAVQAAEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGA 240
           ELSDLS+EI+DGVNKSAQAVQAAEAGIRQIGALA QQTMSMI+ERASLPIISLQPVV GA
Sbjct: 181 ELSDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGA 240

Query: 241 AKKTSRAVGKATRTIMKMISGSGGESSDN-DDNSLDRLEV 280
           AKKTSRAVGKATRTIMKMI  SGGES++N DDNSLDRLEV
Sbjct: 241 AKKTSRAVGKATRTIMKMI--SGGESTENDDDNSLDRLEV 276

[Close]

BLAST of Sed0012175 vs. NCBI nr
Match: KAG6606380.1 (hypothetical protein SDJN03_03697, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036320.1 hypothetical protein SDJN02_03123 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405.6 bits (1041), Expect = 3.5e-109
Identity = 231/280 (82.50%), Postives = 245/280 (87.50%), Query Frame = 0


Query: 1   MRSATFPTTHCPYFMLPIHGFGSSTTKKSILFFTPCKFKPTFLNLRAKPSRLPFLLLCYG 60
           MRSATF  THCP   LP+HGF SS TK SI+  TP KF+P   NLRAKP+R  FL+LCY 
Sbjct: 1   MRSATFLKTHCPCVSLPLHGFSSSPTKNSIVSVTPSKFEPFLFNLRAKPAR--FLVLCYR 60

Query: 61  DSGKSAREEQSVGVEDLDGNLMEEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTF 120
           DS KSA E+QSVGVED +G L  E TEQNQW VEVGSPS GF P AKLSLSDKAFLL TF
Sbjct: 61  DSEKSALEQQSVGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLSDKAFLLFTF 120

Query: 121 IALTTSVAFTSLVIAAVPTLNAMRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTL 180
           +ALTTSVAFTSLVIAAVPT NAMR+AAISLSKLADTAREELPGTMAA+RLSGMEISDLTL
Sbjct: 121 VALTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTL 180

Query: 181 ELSDLSQEISDGVNKSAQAVQAAEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGA 240
           ELSDLSQEI+DGVNKSAQAVQAAEAGIRQIGALA QQTMSMI+ERASLPIISLQPVV GA
Sbjct: 181 ELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGA 240

Query: 241 AKKTSRAVGKATRTIMKMISGSGGESSDN-DDNSLDRLEV 280
           AKKTSRAVGKATRTIMKMI  SGGES++N DDNSLDRLEV
Sbjct: 241 AKKTSRAVGKATRTIMKMI--SGGESTENDDDNSLDRLEV 276

[Close]

BLAST of Sed0012175 vs. NCBI nr
Match: XP_038889010.1 (uncharacterized protein LOC120078775 [Benincasa hispida])

HSP 1 Score: 404.1 bits (1037), Expect = 1.0e-108
Identity = 230/280 (82.14%), Postives = 247/280 (88.21%), Query Frame = 0


Query: 1   MRSATFPTTHCPYFMLPIHGFGSSTTKKSILFFTPCKFKPTFLNLRAKPSRLPFLLLCYG 60
           MRSAT    H P+F LP+HGF SST+K  ILF + CKFKPTF NLRAKP RL  ++ CY 
Sbjct: 1   MRSATL--LHSPFFFLPVHGFTSSTSKNPILFVSHCKFKPTFFNLRAKPDRL--VVFCYR 60

Query: 61  DSGKSAREEQSVGVEDLDGNLMEEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTF 120
           DS KS R+EQSVGVED +G LMEE  E+NQW VEVGSP +GFR   +L+LSDKAFLLLTF
Sbjct: 61  DSEKSVRDEQSVGVEDSNGALMEENVERNQWNVEVGSPGVGFRSLPRLNLSDKAFLLLTF 120

Query: 121 IALTTSVAFTSLVIAAVPTLNAMRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTL 180
           IALTTSVAFTSLVIAAVPTLNAMR+AAISLSKLADTAREELPGTMAA+RLSGMEISDLTL
Sbjct: 121 IALTTSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTL 180

Query: 181 ELSDLSQEISDGVNKSAQAVQAAEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGA 240
           ELSDLSQEI+DGVNKSAQAVQAAEAGIRQIGALA QQTMSMIQERASLPIISLQPVVAGA
Sbjct: 181 ELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVAGA 240

Query: 241 AKKTSRAVGKATRTIMKMISGSGGESSDN-DDNSLDRLEV 280
           AKKTSRAVGKATRTIMKMI  SGGE+ +N DDNSLDRLEV
Sbjct: 241 AKKTSRAVGKATRTIMKMI--SGGENMENDDDNSLDRLEV 274

[Close]

BLAST of Sed0012175 vs. NCBI nr
Match: XP_022996244.1 (uncharacterized protein LOC111491526 [Cucurbita maxima])

HSP 1 Score: 403.3 bits (1035), Expect = 1.7e-108
Identity = 230/280 (82.14%), Postives = 242/280 (86.43%), Query Frame = 0


Query: 1   MRSATFPTTHCPYFMLPIHGFGSSTTKKSILFFTPCKFKPTFLNLRAKPSRLPFLLLCYG 60
           MRSAT   THCPY  LP+HGF  S TK S +  TPCKF+P   NLRAKP+R  FL+LCY 
Sbjct: 1   MRSATSLKTHCPYVSLPLHGFSFSATKNSSVSVTPCKFEPFLFNLRAKPAR--FLVLCYR 60

Query: 61  DSGKSAREEQSVGVEDLDGNLMEEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTF 120
           DS KSA E+QSVGVED +G L  E TEQNQW VEVGSPS GF P AK SLSDKAFLL TF
Sbjct: 61  DSEKSALEQQSVGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKFSLSDKAFLLFTF 120

Query: 121 IALTTSVAFTSLVIAAVPTLNAMRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTL 180
           IALT SVAFTSLVIAAVPT NAMR+AAISLSKLADTAREELPGTMAA+RLSGMEISDLTL
Sbjct: 121 IALTISVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTL 180

Query: 181 ELSDLSQEISDGVNKSAQAVQAAEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGA 240
           ELSDLSQEI+DGVNKSAQAVQAAEAGIRQIGALA QQTMSMIQERASLPIISLQPVV GA
Sbjct: 181 ELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVVGA 240

Query: 241 AKKTSRAVGKATRTIMKMISGSGGESSDN-DDNSLDRLEV 280
           AKKTSRAVGKATRTIMKMI  SGGES++N DDNSLDRLEV
Sbjct: 241 AKKTSRAVGKATRTIMKMI--SGGESTENDDDNSLDRLEV 276

[Close]

BLAST of Sed0012175 vs. ExPASy TrEMBL
Match: A0A6J1EYE8 (uncharacterized protein LOC111437355 OS=Cucurbita moschata OX=3662 GN=LOC111437355 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 9.8e-110
Identity = 231/280 (82.50%), Postives = 244/280 (87.14%), Query Frame = 0


Query: 1   MRSATFPTTHCPYFMLPIHGFGSSTTKKSILFFTPCKFKPTFLNLRAKPSRLPFLLLCYG 60
           MRSATF  THCP   LP+HGF SS TK SI+  TPCKF+P   NLRAKP+R  FL+LCY 
Sbjct: 1   MRSATFLKTHCPCVSLPLHGFSSSPTKNSIVSVTPCKFEPFLFNLRAKPAR--FLVLCYR 60

Query: 61  DSGKSAREEQSVGVEDLDGNLMEEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTF 120
           DS KSA E+QSVGVED  G L  E TEQNQW VE+GSPS GF P AKLSLSDKAFLL TF
Sbjct: 61  DSEKSALEQQSVGVEDSSGALTVENTEQNQWSVELGSPSFGFWPLAKLSLSDKAFLLFTF 120

Query: 121 IALTTSVAFTSLVIAAVPTLNAMRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTL 180
           IAL TSVAFTSLVIAAVPT NAMR+AAISLSKLADTAREELPGTMAA+RLSGMEISDLTL
Sbjct: 121 IALATSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTL 180

Query: 181 ELSDLSQEISDGVNKSAQAVQAAEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGA 240
           ELSDLSQEI+DGVNKSAQAVQAAEAGIRQIGALA QQTMSMI+ERASLPIISLQPVV GA
Sbjct: 181 ELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGA 240

Query: 241 AKKTSRAVGKATRTIMKMISGSGGESSDN-DDNSLDRLEV 280
           AKKTSRAVGKATRTIMKMI  SGGES++N DDNSLDRLEV
Sbjct: 241 AKKTSRAVGKATRTIMKMI--SGGESTENDDDNSLDRLEV 276

[Close]

BLAST of Sed0012175 vs. ExPASy TrEMBL
Match: A0A6J1K868 (uncharacterized protein LOC111491526 OS=Cucurbita maxima OX=3661 GN=LOC111491526 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 8.3e-109
Identity = 230/280 (82.14%), Postives = 242/280 (86.43%), Query Frame = 0


Query: 1   MRSATFPTTHCPYFMLPIHGFGSSTTKKSILFFTPCKFKPTFLNLRAKPSRLPFLLLCYG 60
           MRSAT   THCPY  LP+HGF  S TK S +  TPCKF+P   NLRAKP+R  FL+LCY 
Sbjct: 1   MRSATSLKTHCPYVSLPLHGFSFSATKNSSVSVTPCKFEPFLFNLRAKPAR--FLVLCYR 60

Query: 61  DSGKSAREEQSVGVEDLDGNLMEEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTF 120
           DS KSA E+QSVGVED +G L  E TEQNQW VEVGSPS GF P AK SLSDKAFLL TF
Sbjct: 61  DSEKSALEQQSVGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKFSLSDKAFLLFTF 120

Query: 121 IALTTSVAFTSLVIAAVPTLNAMRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTL 180
           IALT SVAFTSLVIAAVPT NAMR+AAISLSKLADTAREELPGTMAA+RLSGMEISDLTL
Sbjct: 121 IALTISVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTL 180

Query: 181 ELSDLSQEISDGVNKSAQAVQAAEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGA 240
           ELSDLSQEI+DGVNKSAQAVQAAEAGIRQIGALA QQTMSMIQERASLPIISLQPVV GA
Sbjct: 181 ELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVVGA 240

Query: 241 AKKTSRAVGKATRTIMKMISGSGGESSDN-DDNSLDRLEV 280
           AKKTSRAVGKATRTIMKMI  SGGES++N DDNSLDRLEV
Sbjct: 241 AKKTSRAVGKATRTIMKMI--SGGESTENDDDNSLDRLEV 276

[Close]

BLAST of Sed0012175 vs. ExPASy TrEMBL
Match: A0A5D3DAC3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001000 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.7e-106
Identity = 224/280 (80.00%), Postives = 246/280 (87.86%), Query Frame = 0


Query: 1   MRSATFPTTHCPYFMLPIHGFGSSTTKKSILFFTPCKFKPTFLNLRAKPSRLPFLLLCYG 60
           MR++TF   H  YF+ P+ GF  ST+KKSILF  PCKFKP F NLRAKP RL  ++ CYG
Sbjct: 1   MRTSTF--LHSAYFLFPVRGFTCSTSKKSILFVAPCKFKPAFFNLRAKPDRL--VVFCYG 60

Query: 61  DSGKSAREEQSVGVEDLDGNLMEEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTF 120
           DS +S R+EQS+GVED +  L+EE  E+N+W VE+G+PS+GF+   KLSLSDKAFLLLTF
Sbjct: 61  DSERSVRDEQSIGVEDSNVTLVEENVERNRWNVELGTPSVGFQLLPKLSLSDKAFLLLTF 120

Query: 121 IALTTSVAFTSLVIAAVPTLNAMRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTL 180
           IALTTSVAFTSLVIAAVPTLNAMR+AAISLSKLADTAREELPGTMAA+RLSGMEISDLTL
Sbjct: 121 IALTTSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTL 180

Query: 181 ELSDLSQEISDGVNKSAQAVQAAEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGA 240
           ELSDLSQEI+DGVNKSAQAVQAAEAGIRQIGALA QQTMSMIQERASLPIISLQPVVAGA
Sbjct: 181 ELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVAGA 240

Query: 241 AKKTSRAVGKATRTIMKMISGSGGESSDN-DDNSLDRLEV 280
           AKKTS AVGKATRTIMKMI  SGGES +N DDNSLDRLEV
Sbjct: 241 AKKTSHAVGKATRTIMKMI--SGGESVENDDDNSLDRLEV 274

[Close]

BLAST of Sed0012175 vs. ExPASy TrEMBL
Match: A0A1S3BHG6 (uncharacterized protein LOC103489884 OS=Cucumis melo OX=3656 GN=LOC103489884 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.7e-106
Identity = 224/280 (80.00%), Postives = 246/280 (87.86%), Query Frame = 0


Query: 1   MRSATFPTTHCPYFMLPIHGFGSSTTKKSILFFTPCKFKPTFLNLRAKPSRLPFLLLCYG 60
           MR++TF   H  YF+ P+ GF  ST+KKSILF  PCKFKP F NLRAKP RL  ++ CYG
Sbjct: 1   MRTSTF--LHSAYFLFPVRGFTCSTSKKSILFVAPCKFKPAFFNLRAKPDRL--VVFCYG 60

Query: 61  DSGKSAREEQSVGVEDLDGNLMEEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTF 120
           DS +S R+EQS+GVED +  L+EE  E+N+W VE+G+PS+GF+   KLSLSDKAFLLLTF
Sbjct: 61  DSERSVRDEQSIGVEDSNVTLVEENVERNRWNVELGTPSVGFQLLPKLSLSDKAFLLLTF 120

Query: 121 IALTTSVAFTSLVIAAVPTLNAMRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTL 180
           IALTTSVAFTSLVIAAVPTLNAMR+AAISLSKLADTAREELPGTMAA+RLSGMEISDLTL
Sbjct: 121 IALTTSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTL 180

Query: 181 ELSDLSQEISDGVNKSAQAVQAAEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGA 240
           ELSDLSQEI+DGVNKSAQAVQAAEAGIRQIGALA QQTMSMIQERASLPIISLQPVVAGA
Sbjct: 181 ELSDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVAGA 240

Query: 241 AKKTSRAVGKATRTIMKMISGSGGESSDN-DDNSLDRLEV 280
           AKKTS AVGKATRTIMKMI  SGGES +N DDNSLDRLEV
Sbjct: 241 AKKTSHAVGKATRTIMKMI--SGGESVENDDDNSLDRLEV 274

[Close]

BLAST of Sed0012175 vs. ExPASy TrEMBL
Match: A0A6J1HHL4 (uncharacterized protein LOC111464126 OS=Cucurbita moschata OX=3662 GN=LOC111464126 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 3.2e-100
Identity = 219/280 (78.21%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 1   MRSATFPTTHCPYFMLPIHGFGSSTTKKSILFFTPCKFKPTFLNLRAKPSRLPFLLLCYG 60
           MRSATF    CPYF+LP+HGF SST+K SI      KFKPTF N RAKP+RL  ++ C  
Sbjct: 1   MRSATF--LCCPYFLLPVHGFSSSTSKNSI------KFKPTFFNSRAKPARL--VVFCCR 60

Query: 61  DSGKSAREEQSVGVEDLDGNLMEEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTF 120
           DS KS R EQSVG++D +  LME+  E+ QW  EVG PS+GF+P AKLSLSDKA LLLTF
Sbjct: 61  DSEKSVRNEQSVGIDDSNRALMEKNIERMQWNEEVGCPSVGFQPLAKLSLSDKASLLLTF 120

Query: 121 IALTTSVAFTSLVIAAVPTLNAMRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTL 180
           IALT SVAFTSLVIAAVPTLNAMR+AAISLSKLADTAREELPGTMAA+RLSGMEISDLTL
Sbjct: 121 IALTASVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTL 180

Query: 181 ELSDLSQEISDGVNKSAQAVQAAEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGA 240
           ELSDLSQEI+DGVNKSAQAVQAAEAGIRQI A+A Q+TMSMIQERA LP+ISLQPVVAGA
Sbjct: 181 ELSDLSQEIADGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGA 240

Query: 241 AKKTSRAVGKATRTIMKMISGSGGESSDN-DDNSLDRLEV 280
           AKKTSRAVGKATRTIMKMI  SGGES +N DDNSLDRLEV
Sbjct: 241 AKKTSRAVGKATRTIMKMI--SGGESMENDDDNSLDRLEV 268

[Close]

BLAST of Sed0012175 vs. TAIR 10
Match: AT1G08530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09995.2); Has 140 Blast hits to 140 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 221.5 bits (563), Expect = 8.6e-58
Identity = 132/185 (71.35%), Postives = 155/185 (83.78%), Query Frame = 0


Query: 86  TEQNQWVVEVGSP-SL-GFRPFAKLSLSDKAFLLLTFIALTTSVAFTSLVIAAVPTLNAM 145
           T  N   ++VGSP SL    P AKLSLSD+AFLLL FI  TTSVAFTSLVI A+PTL AM
Sbjct: 74  TSLNNLKMQVGSPISLHSINPLAKLSLSDQAFLLLAFIVCTTSVAFTSLVITAIPTLVAM 133

Query: 146 RKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTLELSDLSQEISDGVNKSAQAVQAA 205
            +AA S +KLADTAR+ELP T+AAVRLSGMEISDLTLELSDLSQ+I+DG+NKSA+AVQAA
Sbjct: 134 GRAATSFAKLADTARKELPSTLAAVRLSGMEISDLTLELSDLSQDITDGINKSAKAVQAA 193

Query: 206 EAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGAAKKTSRAVGKATRTIMKMISGSG 265
           EAGI+QIG LAQQQT+SMI+ERA+LP ISLQPVVAGAA+KTS A+G AT+ +M +I+G G
Sbjct: 194 EAGIKQIGTLAQQQTLSMIEERANLPEISLQPVVAGAAEKTSHAIGSATKRLMNIITG-G 253

Query: 266 GESSD 269
            +  D
Sbjct: 254 NKDED 257

[Close]

BLAST of Sed0012175 vs. TAIR 10
Match: AT5G09995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 99.8 bits (247), Expect = 3.8e-21
Identity = 62/128 (48.44%), Postives = 85/128 (66.41%), Query Frame = 0


Query: 83  EEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTFIALTTSVAFTSLVIAAVPTLNA 142
           +E +  +Q    VG P L     ++ + + K F+LL  +A  T+++ + L  AA+PTL A
Sbjct: 67  QEPSISSQLTSSVGQPPL---QLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLA 126

Query: 143 MRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTLELSDLSQEISDGVNKSAQAVQA 202
            +KAA SL KL D  REELP TMAAVRLSGMEISDLT+ELSDL Q I+ GV  S +A++ 
Sbjct: 127 FKKAAESLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRV 186

Query: 203 AEAGIRQI 211
           AE  +R++
Sbjct: 187 AEDRLRRL 191

[Close]

BLAST of Sed0012175 vs. TAIR 10
Match: AT5G09995.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 98.6 bits (244), Expect = 8.4e-21
Identity = 70/178 (39.33%), Postives = 105/178 (58.99%), Query Frame = 0


Query: 83  EEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTFIALTTSVAFTSLVIAAVPTLNA 142
           +E +  +Q    VG P L     ++ + + K F+LL  +A  T+++ + L  AA+PTL A
Sbjct: 67  QEPSISSQLTSSVGQPPL---QLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLA 126

Query: 143 MRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTLELSDLSQEISDGVNKSAQAVQA 202
            +KAA SL KL D  REELP TMAAVRLSGMEISDLT+ELSDL Q I+ GV  S +A++ 
Sbjct: 127 FKKAAESLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRV 186

Query: 203 AEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGAAKKTSRAVGKATRTIMKMIS 261
           AE  +R++  +    +M  +  +        +P++A  A+     V K  R++ ++ S
Sbjct: 187 AEDRLRRLTNMNPVASMQEVMRQTKTD--ETEPMLAKQARSFREGVVKG-RSLWQLFS 238

[Close]

BLAST of Sed0012175 vs. TAIR 10
Match: AT5G09995.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-20
Identity = 72/178 (40.45%), Postives = 103/178 (57.87%), Query Frame = 0


Query: 83  EEKTEQNQWVVEVGSPSLGFRPFAKLSLSDKAFLLLTFIALTTSVAFTSLVIAAVPTLNA 142
           +E +  +Q    VG P L     ++ + + K F+LL  +A  T+++ + L  AA+PTL A
Sbjct: 67  QEPSISSQLTSSVGQPPL---QLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLA 126

Query: 143 MRKAAISLSKLADTAREELPGTMAAVRLSGMEISDLTLELSDLSQEISDGVNKSAQAVQA 202
            +KAA SL KL D  REELP TMAAVRLSGMEISDLT+ELSDL Q I+ GV  S +A++ 
Sbjct: 127 FKKAAESLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRV 186

Query: 203 AEAGIRQIGALAQQQTMSMIQERASLPIISLQPVVAGAAKKTSRAVGKATRTIMKMIS 261
           AE  +R+   L      SM +          +P++A  A+     V K  R++ ++ S
Sbjct: 187 AEDRLRR---LTNMNPASMQEVMRQTKTDETEPMLAKQARSFREGVVKG-RSLWQLFS 237

The following BLAST results are available for this feature:

BLAST of Sed0012175 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931045.1	2.0e-109	82.50	uncharacterized protein LOC111437355 [Cucurbita moschata]	[more]
XP_023533033.1	2.6e-109	81.79	uncharacterized protein LOC111795040 [Cucurbita pepo subsp. pepo]	[more]
KAG6606380.1	3.5e-109	82.50	hypothetical protein SDJN03_03697, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038889010.1	1.0e-108	82.14	uncharacterized protein LOC120078775 [Benincasa hispida]	[more]
XP_022996244.1	1.7e-108	82.14	uncharacterized protein LOC111491526 [Cucurbita maxima]	[more]

BLAST of Sed0012175 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0012175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYE8	9.8e-110	82.50	uncharacterized protein LOC111437355 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1K868	8.3e-109	82.14	uncharacterized protein LOC111491526 OS=Cucurbita maxima OX=3661 GN=LOC111491526...	[more]
A0A5D3DAC3	1.7e-106	80.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BHG6	1.7e-106	80.00	uncharacterized protein LOC103489884 OS=Cucumis melo OX=3656 GN=LOC103489884 PE=...	[more]
A0A6J1HHL4	3.2e-100	78.21	uncharacterized protein LOC111464126 OS=Cucurbita moschata OX=3662 GN=LOC1114641...	[more]

BLAST of Sed0012175 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08530.1	8.6e-58	71.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G09995.1	3.8e-21	48.44	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G09995.2	8.4e-21	39.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G09995.3	1.1e-20	40.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..279
None	No IPR available	PANTHER	PTHR33825:SF14	CHITINASE-LIKE PROTEIN	coord: 34..278
None	No IPR available	PANTHER	PTHR33825	CHITINASE-LIKE PROTEIN	coord: 34..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012175.1	Sed0012175.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity