Homology
BLAST of Sed0012144 vs. NCBI nr
Match:
KAG6597439.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1357.4 bits (3512), Expect = 0.0e+00
Identity = 659/726 (90.77%), Postives = 696/726 (95.87%), Query Frame = 0
Query: 1 MEAISYPTSILPLQLPAYPTRPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLF 60
ME +S+ TSILPLQLP YPTRP ALSAALS+AT+L H+KQ+HAQILRSKF+RSDSDSLLF
Sbjct: 1 METLSHTTSILPLQLPPYPTRPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
Query: 61 KLILSSFSLSPSLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLS 120
KLILSS SLSPSLDYALSVFDQIP+PK+RFCNKLLRE+SRGSEPE ALFVY+KMRA+ LS
Sbjct: 61 KLILSSCSLSPSLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
Query: 121 FDRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLV 180
DR CFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGL+RMY+AC RIMEARLV
Sbjct: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
Query: 181 FDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNL 240
FDKMS RDVVTWSIMIDGYCISG YDLAFQLFEEMKRTGLEPDEMILST+LSACARAGNL
Sbjct: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
Query: 241 DFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGL 300
DFGTK+HEFITKKN+VMD HLQSALI MYASCGS DLAWDLYEKISPKNMV+STAMVSGL
Sbjct: 241 DFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGL 300
Query: 301 AKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTML 360
AKGGQI DAR VFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ+LG+KPDVVTML
Sbjct: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKK 420
SVISACAHLGALDQAKWIQ YVDK GFGKALS+SNALIDMYAKCGSLEGARE+FGKMPKK
Sbjct: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSISNALIDMYAKCGSLEGAREIFGKMPKK 420
Query: 421 NVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIF 480
NVISWTSMINA AMHGDAH ALSLFHQMKVENVEPNWITFVG+LYACSHGGLVEEGQRIF
Sbjct: 421 NVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIF 480
Query: 481 HSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDE 540
HSMINEYGISPKHEH+GCMVDLFGRA LLREALEV+EAMPFAPNAIIWGSLMAACQLH
Sbjct: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGG 540
Query: 541 TELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEPDH+GALVVLSNIYAKER+WE+ GEVRKLMNEMGVSKERGCSRIE
Sbjct: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
Query: 601 LNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWH 660
LNNEVHEFQM DRKHKQADLIYQKL+EVVQ LKLAGYTP+TNCVL+DLDE+EKKELVLWH
Sbjct: 601 LNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDEEEKKELVLWH 660
Query: 661 SEKLALCFALMNEGSRICIIKNLRICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSC 720
SEKLALC+ALMNEGSRICIIKNLRIC+DCHAFMKLAS+VY REI++RDRTRFHHYR GSC
Sbjct: 661 SEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRAGSC 720
Query: 721 SCKDYW 727
SCKDYW
Sbjct: 721 SCKDYW 726
BLAST of Sed0012144 vs. NCBI nr
Match:
XP_022959359.1 (pentatricopeptide repeat-containing protein At4g14820 [Cucurbita moschata] >XP_022960069.1 pentatricopeptide repeat-containing protein At4g14820 [Cucurbita moschata])
HSP 1 Score: 1355.1 bits (3506), Expect = 0.0e+00
Identity = 656/726 (90.36%), Postives = 697/726 (96.01%), Query Frame = 0
Query: 1 MEAISYPTSILPLQLPAYPTRPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLF 60
ME +S+ TSILPLQLP YPT+P ALSAALS+AT+L H+KQ+HAQILRSKF+RSDSDSLLF
Sbjct: 1 METLSHTTSILPLQLPPYPTKPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
Query: 61 KLILSSFSLSPSLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLS 120
KLILSS SLSPSLDYALSVFDQIP+PK+RFCNKLLRE+SRGSEPE ALFVY+KMRA+ LS
Sbjct: 61 KLILSSCSLSPSLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
Query: 121 FDRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLV 180
DR CFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGL+RMY+AC RIMEARLV
Sbjct: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
Query: 181 FDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNL 240
FDKMS RDVVTWSIMIDGYCISG YDLAFQLFEEMKRTGLEPDEMILST+LSACARAGNL
Sbjct: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
Query: 241 DFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGL 300
DFGTK+HEFITKKN+VMD HLQSALI MYASCGS DLAWDLYEKISPKNMV+STAMVSGL
Sbjct: 241 DFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGL 300
Query: 301 AKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTML 360
AKGGQI DAR VFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ+LG+KPDVVTML
Sbjct: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKK 420
SVISACAHLGALDQAKWIQ YVDK GFGKALS++NALIDMYAKCGSLEGARE+FGKMPKK
Sbjct: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
Query: 421 NVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIF 480
NVISWTSMINA AMHGDAH ALSLFHQMKVENVEPNWITFVG+LYACSHGGLVEEGQRIF
Sbjct: 421 NVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIF 480
Query: 481 HSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDE 540
HSMINEYGISPKHEH+GCMVDLFGRA LLREALEV+EAMPFAPNAIIWGSLMAACQLH +
Sbjct: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGD 540
Query: 541 TELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEPDH+GALVVLSNIYAKER+WE+ GEVRKLMNEMGVSKERGCSRIE
Sbjct: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
Query: 601 LNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWH 660
LNNEVHEFQM DRKHKQADLIYQKL+EVVQ LKLAGYTP+TNCVL+DLD++EKKELVLWH
Sbjct: 601 LNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWH 660
Query: 661 SEKLALCFALMNEGSRICIIKNLRICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSC 720
SEKLALC+ALMNEGSRICIIKNLRIC+DCHAFMKLAS+VY REI++RDRTRFHHYR GSC
Sbjct: 661 SEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSC 720
Query: 721 SCKDYW 727
SCKDYW
Sbjct: 721 SCKDYW 726
BLAST of Sed0012144 vs. NCBI nr
Match:
XP_022974384.1 (pentatricopeptide repeat-containing protein At4g14820-like [Cucurbita maxima] >XP_022975405.1 pentatricopeptide repeat-containing protein At4g14820-like isoform X1 [Cucurbita maxima] >XP_022975406.1 pentatricopeptide repeat-containing protein At4g14820-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1352.0 bits (3498), Expect = 0.0e+00
Identity = 655/726 (90.22%), Postives = 696/726 (95.87%), Query Frame = 0
Query: 1 MEAISYPTSILPLQLPAYPTRPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLF 60
ME +S+ TSILPLQLP YPTRP ALSAALS+AT+L H+KQ+HAQILRSKF+RSDSDSLLF
Sbjct: 1 METLSHTTSILPLQLPPYPTRPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
Query: 61 KLILSSFSLSPSLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLS 120
KLILSS +LSPSLDYALSVFDQIP+PKTRFCNKLLRE+SRGSEPE ALFVY+KMRA+ LS
Sbjct: 61 KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
Query: 121 FDRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLV 180
DR CFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGL+RMY+AC RIMEARLV
Sbjct: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
Query: 181 FDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNL 240
FDKMS RDVVTWSIMIDGYC+SG YDLAFQLFEEMKRTGLEPDEMILST+LSACARAGNL
Sbjct: 181 FDKMSQRDVVTWSIMIDGYCLSGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
Query: 241 DFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGL 300
DFGTKIHEFITKKN+VMD HLQSALI MYAS GS DLAWDLYEKISPKNMV+STAMVSGL
Sbjct: 241 DFGTKIHEFITKKNIVMDPHLQSALIKMYASYGSTDLAWDLYEKISPKNMVISTAMVSGL 300
Query: 301 AKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTML 360
AKGGQI DAR VFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ++G+KPDVVTML
Sbjct: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQMGMKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKK 420
SVISACAHLGALDQAKWIQ YVDK GFGKALS++NALIDMYAKCGSLEGARE+FGKMPKK
Sbjct: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
Query: 421 NVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIF 480
NVISWTSMINA AMHGDAHNALSLFHQMKVENVEPNWITFVG+LYACSHGGLV+EGQRIF
Sbjct: 421 NVISWTSMINALAMHGDAHNALSLFHQMKVENVEPNWITFVGLLYACSHGGLVKEGQRIF 480
Query: 481 HSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDE 540
HSMINEYGISPKHEH+GCMVDLFGRA LLREALEV+EAMPFAPNAIIWGSLMAACQLH +
Sbjct: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHSD 540
Query: 541 TELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEPDH+GALVVLSNIYAKER+WE+ GEVRKLMNEMGVSKERGCSRIE
Sbjct: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
Query: 601 LNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWH 660
LNNEVHEFQM DRKHKQADLIY KL+EVVQKLKLAGYTP+TNCVL+DLDE+EKKELVLWH
Sbjct: 601 LNNEVHEFQMADRKHKQADLIYHKLNEVVQKLKLAGYTPQTNCVLVDLDEEEKKELVLWH 660
Query: 661 SEKLALCFALMNEGSRICIIKNLRICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSC 720
SEKLALC+ALMNEGSRICI KNLRIC+DCHAFMKLAS+VY REI++RDRTRFHHYR GSC
Sbjct: 661 SEKLALCYALMNEGSRICITKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSC 720
Query: 721 SCKDYW 727
SCKDYW
Sbjct: 721 SCKDYW 726
BLAST of Sed0012144 vs. NCBI nr
Match:
XP_023538947.1 (pentatricopeptide repeat-containing protein At4g14820 [Cucurbita pepo subsp. pepo] >XP_023538948.1 pentatricopeptide repeat-containing protein At4g14820 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1351.7 bits (3497), Expect = 0.0e+00
Identity = 654/726 (90.08%), Postives = 696/726 (95.87%), Query Frame = 0
Query: 1 MEAISYPTSILPLQLPAYPTRPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLF 60
ME +S+ TSILPL LP YPTRPTALSAALS+AT+L H+KQ+HAQILRSKF+RSDSDSLLF
Sbjct: 1 METLSHTTSILPLHLPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
Query: 61 KLILSSFSLSPSLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLS 120
KLILSS +LSPSLDYALSVFDQIP+PKTRFCNKLLRE+SRGSEPE ALF+Y+KMRA+ LS
Sbjct: 61 KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLS 120
Query: 121 FDRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLV 180
DR CFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGL+RMY+AC RIMEARLV
Sbjct: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
Query: 181 FDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNL 240
FDKMS RDVVTWSIMIDGYCISG YDLAFQLFEEMKRTGLEPDEMILST+LSACARAGNL
Sbjct: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
Query: 241 DFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGL 300
DFGTKIHEFITK N+VMD HLQSALI MYASCGS DLAWDLYEKI+PKNMV+STAMVSGL
Sbjct: 241 DFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGL 300
Query: 301 AKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTML 360
AKGGQI DAR VFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ+LG+KPDVVTML
Sbjct: 301 AKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKK 420
SVISACAHLGALDQAKWIQ YVDK GFGKALS++NALIDMYAKCGSLEGARE+FGKMPKK
Sbjct: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
Query: 421 NVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIF 480
NVISWTSMINA AMHGDAHNALSLFHQMKVENVEPNWITFVG+LYACSHGGLVEEGQRIF
Sbjct: 421 NVISWTSMINALAMHGDAHNALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIF 480
Query: 481 HSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDE 540
HSMINEYGISPKHEH+GCMVDLFGRA LLREALEV+EAMPFAPNAIIWGSLMAACQLH +
Sbjct: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGD 540
Query: 541 TELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEPDH+GALVVLSN+YAKER+WE+ G+VRKLMNEMGVSKERGCSRIE
Sbjct: 541 TELGEFAAKQVLKLEPDHDGALVVLSNLYAKERRWEDAGDVRKLMNEMGVSKERGCSRIE 600
Query: 601 LNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWH 660
LNNEVHEFQM DRKHKQADLIYQKL+EVVQ LKLAGYTP+ NCVL+DLDE+EKKELVLWH
Sbjct: 601 LNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQINCVLVDLDEEEKKELVLWH 660
Query: 661 SEKLALCFALMNEGSRICIIKNLRICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSC 720
SEKLALC+ALMNEGSRICIIKNLRIC+DCHAFMKLAS+VY REI++RDRTRFHHYR GSC
Sbjct: 661 SEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSC 720
Query: 721 SCKDYW 727
SCKDYW
Sbjct: 721 SCKDYW 726
BLAST of Sed0012144 vs. NCBI nr
Match:
XP_022975407.1 (pentatricopeptide repeat-containing protein At4g14820-like isoform X2 [Cucurbita maxima])
HSP 1 Score: 1343.2 bits (3475), Expect = 0.0e+00
Identity = 655/738 (88.75%), Postives = 696/738 (94.31%), Query Frame = 0
Query: 1 MEAISYPTSILPLQLPAYPTRPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLF 60
ME +S+ TSILPLQLP YPTRP ALSAALS+AT+L H+KQ+HAQILRSKF+RSDSDSLLF
Sbjct: 1 METLSHTTSILPLQLPPYPTRPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
Query: 61 KLILSSFSLSPSLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLS 120
KLILSS +LSPSLDYALSVFDQIP+PKTRFCNKLLRE+SRGSEPE ALFVY+KMRA+ LS
Sbjct: 61 KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
Query: 121 FDRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLV 180
DR CFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGL+RMY+AC RIMEARLV
Sbjct: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
Query: 181 FDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNL 240
FDKMS RDVVTWSIMIDGYC+SG YDLAFQLFEEMKRTGLEPDEMILST+LSACARAGNL
Sbjct: 181 FDKMSQRDVVTWSIMIDGYCLSGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
Query: 241 DFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGL 300
DFGTKIHEFITKKN+VMD HLQSALI MYAS GS DLAWDLYEKISPKNMV+STAMVSGL
Sbjct: 241 DFGTKIHEFITKKNIVMDPHLQSALIKMYASYGSTDLAWDLYEKISPKNMVISTAMVSGL 300
Query: 301 AKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTML 360
AKGGQI DAR VFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ++G+KPDVVTML
Sbjct: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQMGMKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKK 420
SVISACAHLGALDQAKWIQ YVDK GFGKALS++NALIDMYAKCGSLEGARE+FGKMPKK
Sbjct: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
Query: 421 NVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIF 480
NVISWTSMINA AMHGDAHNALSLFHQMKVENVEPNWITFVG+LYACSHGGLV+EGQRIF
Sbjct: 421 NVISWTSMINALAMHGDAHNALSLFHQMKVENVEPNWITFVGLLYACSHGGLVKEGQRIF 480
Query: 481 HSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDE 540
HSMINEYGISPKHEH+GCMVDLFGRA LLREALEV+EAMPFAPNAIIWGSLMAACQLH +
Sbjct: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHSD 540
Query: 541 TELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEPDH+GALVVLSNIYAKER+WE+ GEVRKLMNEMGVSKERGCSRIE
Sbjct: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
Query: 601 LNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWH 660
LNNEVHEFQM DRKHKQADLIY KL+EVVQKLKLAGYTP+TNCVL+DLDE+EKKELVLWH
Sbjct: 601 LNNEVHEFQMADRKHKQADLIYHKLNEVVQKLKLAGYTPQTNCVLVDLDEEEKKELVLWH 660
Query: 661 SEKLALCFALMNEGSR------------ICIIKNLRICDDCHAFMKLASEVYDREIIIRD 720
SEKLALC+ALMNEGSR ICI KNLRIC+DCHAFMKLAS+VY REI++RD
Sbjct: 661 SEKLALCYALMNEGSRICITKNLRICEGICITKNLRICEDCHAFMKLASKVYAREIVVRD 720
Query: 721 RTRFHHYRGGSCSCKDYW 727
RTRFHHYR GSCSCKDYW
Sbjct: 721 RTRFHHYRDGSCSCKDYW 738
BLAST of Sed0012144 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 846.7 bits (2186), Expect = 2.0e-244
Identity = 415/725 (57.24%), Postives = 541/725 (74.62%), Query Frame = 0
Query: 11 LPLQLPAYPTRPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLFKLILSSFSLS 70
+ L P T + LS +L H+KQLHA ILR+ + +S LF L +SS S+
Sbjct: 1 MTLPPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHK-LNSFLFNLSVSSSSI- 60
Query: 71 PSLDYALSVFDQIPD-PKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLSFDRSCFPPL 130
+L YAL+VF IP P++ N LR++SR SEP + YQ++R D+ F P+
Sbjct: 61 -NLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPI 120
Query: 131 LKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLVFDKMSHRDV 190
LKA S+ +L GME+HG+A K+ DPFVETG + MY++CGRI AR VFD+MSHRDV
Sbjct: 121 LKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 180
Query: 191 VTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNLDFGTKIHEF 250
VTW+ MI+ YC G D AF+LFEEMK + + PDEMIL ++SAC R GN+ + I+EF
Sbjct: 181 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF 240
Query: 251 ITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGLAKGGQISDA 310
+ + ++ MD HL +AL+TMYA G +D+A + + K+S +N+ VSTAMVSG +K G++ DA
Sbjct: 241 LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDA 300
Query: 311 RRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTMLSVISACAHL 370
+ +FDQ +KDL+CW+ MIS Y ESD PQEAL +F++M GIKPDVV+M SVISACA+L
Sbjct: 301 QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANL 360
Query: 371 GALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKKNVISWTSMI 430
G LD+AKW+ S + G LS++NALI+MYAKCG L+ R+VF KMP++NV+SW+SMI
Sbjct: 361 GILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMI 420
Query: 431 NAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIFHSMINEYGI 490
NA +MHG+A +ALSLF +MK ENVEPN +TFVGVLY CSH GLVEEG++IF SM +EY I
Sbjct: 421 NALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNI 480
Query: 491 SPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDETELGEFAAK 550
+PK EHYGCMVDLFGRANLLREALEVIE+MP A N +IWGSLM+AC++H E ELG+FAAK
Sbjct: 481 TPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAK 540
Query: 551 QVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIELNNEVHEFQ 610
++L+LEPDH+GALV++SNIYA+E++WE+V +R++M E V KE+G SRI+ N + HEF
Sbjct: 541 RILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFL 600
Query: 611 MGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWHSEKLALCFA 670
+GD++HKQ++ IY KLDEVV KLKLAGY P VL+D++E+EKK+LVLWHSEKLALCF
Sbjct: 601 IGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFG 660
Query: 671 LMNEGSR--------ICIIKNLRICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSCS 727
LMNE I I+KNLR+C+DCH F KL S+VY+REII+RDRTRFH Y+ G CS
Sbjct: 661 LMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCS 720
BLAST of Sed0012144 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 601.7 bits (1550), Expect = 1.1e-170
Identity = 306/733 (41.75%), Postives = 464/733 (63.30%), Query Frame = 0
Query: 12 PLQLPAY-----PTRPTALS------AALSAATTLRHLKQLHAQILRS-KFDRSDSDSLL 71
PL LP + P +PT + + + +LR LKQ H ++R+ F S S L
Sbjct: 9 PLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKL 68
Query: 72 FKL-ILSSFSLSPSLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADN 131
F + LSSF+ SL+YA VFD+IP P + N L+R + G +P ++++ + M +++
Sbjct: 69 FAMAALSSFA---SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 128
Query: 132 LSF-DRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEA 191
+ ++ FP L+KAA+ SL G +HG+A K GSD FV L+ Y +CG + A
Sbjct: 129 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 188
Query: 192 RLVFDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARA 251
VF + +DVV+W+ MI+G+ G D A +LF++M+ ++ + + VLSACA+
Sbjct: 189 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 248
Query: 252 GNLDFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMV 311
NL+FG ++ +I + + ++ L +A++ MY CGSI+ A L++ + K+ V T M+
Sbjct: 249 RNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 308
Query: 312 SGLAKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ-ELGIKPDV 371
G A AR V + M +KD++ W+A+IS Y ++ P EAL++F ++Q + +K +
Sbjct: 309 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQ 368
Query: 372 VTMLSVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGK 431
+T++S +SACA +GAL+ +WI SY+ K G V++ALI MY+KCG LE +REVF
Sbjct: 369 ITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 428
Query: 432 MPKKNVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEG 491
+ K++V W++MI AMHG + A+ +F++M+ NV+PN +TF V ACSH GLV+E
Sbjct: 429 VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 488
Query: 492 QRIFHSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQ 551
+ +FH M + YGI P+ +HY C+VD+ GR+ L +A++ IEAMP P+ +WG+L+ AC+
Sbjct: 489 ESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACK 548
Query: 552 LHDETELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGC 611
+H L E A ++L+LEP ++GA V+LSNIYAK KWENV E+RK M G+ KE GC
Sbjct: 549 IHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGC 608
Query: 612 SRIELNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKEL 671
S IE++ +HEF GD H ++ +Y KL EV++KLK GY P + VL ++E+E KE
Sbjct: 609 SSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQ 668
Query: 672 VL-WHSEKLALCFALMNEGSR--ICIIKNLRICDDCHAFMKLASEVYDREIIIRDRTRFH 727
L HSEKLA+C+ L++ + I +IKNLR+C DCH+ KL S++YDREII+RDR RFH
Sbjct: 669 SLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFH 728
BLAST of Sed0012144 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 545.8 bits (1405), Expect = 7.3e-154
Identity = 299/762 (39.24%), Postives = 445/762 (58.40%), Query Frame = 0
Query: 5 SYPTSILPLQL-PAYPT-RPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLFKL 64
SYP LP P Y + R + L TL+ L+ +HAQ++ K +++ L KL
Sbjct: 14 SYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMI--KIGLHNTNYALSKL 73
Query: 65 ILSSFSLSP---SLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADNL 124
I LSP L YA+SVF I +P N + R + S+P AL +Y M + L
Sbjct: 74 I-EFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGL 133
Query: 125 SFDRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARL 184
+ FP +LK+ +++ + + G +IHG KLG D +V T L+ MY GR+ +A
Sbjct: 134 LPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHK 193
Query: 185 VFDKMSHR-------------------------------DVVTWSIMIDGYCISGCYDLA 244
VFDK HR DVV+W+ MI GY +G Y A
Sbjct: 194 VFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEA 253
Query: 245 FQLFEEMKRTGLEPDEMILSTVLSACARAGNLDFGTKIHEFITKKNMVMDFHLQSALITM 304
+LF++M +T + PDE + TV+SACA++G+++ G ++H +I + + +ALI +
Sbjct: 254 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDL 313
Query: 305 YASCGSIDLAWDLYEKISPKNMVVSTAMVSGLAKGGQISDARRVFDQMVEKDLICWSAMI 364
Y+ CG ++ A L+E++ KD+I W+ +I
Sbjct: 314 YSKCGELETACGLFERLP-------------------------------YKDVISWNTLI 373
Query: 365 SGYTESDCPQEALVLFKKMQELGIKPDVVTMLSVISACAHLGALDQAKWIQSYVDK--KG 424
GYT + +EAL+LF++M G P+ VTMLS++ ACAHLGA+D +WI Y+DK KG
Sbjct: 374 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 433
Query: 425 FGKALSVSNALIDMYAKCGSLEGAREVFGKMPKKNVISWTSMINAFAMHGDAHNALSLFH 484
A S+ +LIDMYAKCG +E A +VF + K++ SW +MI FAMHG A + LF
Sbjct: 434 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS 493
Query: 485 QMKVENVEPNWITFVGVLYACSHGGLVEEGQRIFHSMINEYGISPKHEHYGCMVDLFGRA 544
+M+ ++P+ ITFVG+L ACSH G+++ G+ IF +M +Y ++PK EHYGCM+DL G +
Sbjct: 494 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHS 553
Query: 545 NLLREALEVIEAMPFAPNAIIWGSLMAACQLHDETELGEFAAKQVLKLEPDHNGALVVLS 604
L +EA E+I M P+ +IW SL+ AC++H ELGE A+ ++K+EP++ G+ V+LS
Sbjct: 554 GLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLS 613
Query: 605 NIYAKERKWENVGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMGDRKHKQADLIYQKLD 664
NIYA +W V + R L+N+ G+ K GCS IE+++ VHEF +GD+ H + IY L+
Sbjct: 614 NIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLE 673
Query: 665 EVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWHSEKLALCFALMN--EGSRICIIKNLR 724
E+ L+ AG+ P T+ VL +++E+ K+ + HSEKLA+ F L++ G+++ I+KNLR
Sbjct: 674 EMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLR 733
Query: 725 ICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSCSCKDYW 727
+C +CH KL S++Y REII RDRTRFHH+R G CSC DYW
Sbjct: 734 VCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Sed0012144 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 516.2 bits (1328), Expect = 6.2e-145
Identity = 281/811 (34.65%), Postives = 435/811 (53.64%), Query Frame = 0
Query: 24 ALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLFKLILSSFSLS--PSLDYALSVFD 83
A ++L T+ LK H + + D + S + KL+ S L SL +A VF+
Sbjct: 34 ATPSSLKNCKTIDELKMFHRSLTKQGLD--NDVSTITKLVARSCELGTRESLSFAKEVFE 93
Query: 84 QIPDPKTRFC-NKLLREVSRGSEPEIALFVYQKMRADNLSFDRSCFPPLLKAASRNLSLR 143
T F N L+R + A+ ++ +M +S D+ FP L A +++ +
Sbjct: 94 NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 153
Query: 144 TGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLVFDKMSHRDVVTWSIMIDGYC 203
G++IHGL K+G+ D FV+ LV Y+ CG + AR VFD+MS R+VV+W+ MI GY
Sbjct: 154 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 213
Query: 204 -------------------------------ISGC------------------------- 263
IS C
Sbjct: 214 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 273
Query: 264 ---------------YDLAFQLFEE-------------------------------MKRT 323
D+A +LF+E M +
Sbjct: 274 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 333
Query: 324 GLEPDEMILSTVLSACARAGNLDFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLA 383
G+ PD + + + +S+C++ N+ +G H ++ + ++ +ALI MY C D A
Sbjct: 334 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 393
Query: 384 WDLYEKISPKNMVVSTAMVSGLAKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQ 443
+ +++++S K +V ++V+G + G++ A F+ M EK+++ W+ +ISG + +
Sbjct: 394 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 453
Query: 444 EALVLFKKMQ-ELGIKPDVVTMLSVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNAL 503
EA+ +F MQ + G+ D VTM+S+ SAC HLGALD AKWI Y++K G + + L
Sbjct: 454 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 513
Query: 504 IDMYAKCGSLEGAREVFGKMPKKNVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNW 563
+DM+++CG E A +F + ++V +WT+ I A AM G+A A+ LF M + ++P+
Sbjct: 514 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 573
Query: 564 ITFVGVLYACSHGGLVEEGQRIFHSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIE 623
+ FVG L ACSHGGLV++G+ IF+SM+ +G+SP+ HYGCMVDL GRA LL EA+++IE
Sbjct: 574 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 633
Query: 624 AMPFAPNAIIWGSLMAACQLHDETELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWEN 683
MP PN +IW SL+AAC++ E+ +AA+++ L P+ G+ V+LSN+YA +W +
Sbjct: 634 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 693
Query: 684 VGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGY 727
+ +VR M E G+ K G S I++ + HEF GD H + I LDEV Q+ G+
Sbjct: 694 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 753
BLAST of Sed0012144 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 504.2 bits (1297), Expect = 2.4e-141
Identity = 260/705 (36.88%), Postives = 422/705 (59.86%), Query Frame = 0
Query: 26 SAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLFKLILSSFSLSPSLDYALSVFDQIPD 85
++ + +AT LKQ+HA++L S L+ KLI +S S + +A VFD +P
Sbjct: 25 ASLIDSATHKAQLKQIHARLL--VLGLQFSGFLITKLIHASSSFG-DITFARQVFDDLPR 84
Query: 86 PKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLSFDRSCFPPLLKAASRNLSLRTGMEI 145
P+ N ++R SR + + AL +Y M+ +S D FP LLKA S L+ G +
Sbjct: 85 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 144
Query: 146 HGLASKLGFGSDPFVETGLVRMYSACGRIMEARLVFD--KMSHRDVVTWSIMIDGYCISG 205
H +LGF +D FV+ GL+ +Y+ C R+ AR VF+ + R +V+W+ ++ Y +G
Sbjct: 145 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 204
Query: 206 CYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNLDFGTKIHEFITKKNMVMDFHLQS 265
A ++F +M++ ++PD + L +VL+A +L G IH + K + ++ L
Sbjct: 205 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 264
Query: 266 ALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGLAKGGQISDARRVFDQMVEKDLIC 325
+L TMYA C GQ++ A+ +FD+M +LI
Sbjct: 265 SLNTMYAKC-------------------------------GQVATAKILFDKMKSPNLIL 324
Query: 326 WSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTMLSVISACAHLGALDQAKWIQSYVD 385
W+AMISGY ++ +EA+ +F +M ++PD +++ S ISACA +G+L+QA+ + YV
Sbjct: 325 WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 384
Query: 386 KKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKKNVISWTSMINAFAMHGDAHNALS 445
+ + + +S+ALIDM+AKCGS+EGAR VF + ++V+ W++MI + +HG A A+S
Sbjct: 385 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 444
Query: 446 LFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIFHSMINEYGISPKHEHYGCMVDLF 505
L+ M+ V PN +TF+G+L AC+H G+V EG F+ M ++ I+P+ +HY C++DL
Sbjct: 445 LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLL 504
Query: 506 GRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDETELGEFAAKQVLKLEPDHNGALV 565
GRA L +A EVI+ MP P +WG+L++AC+ H ELGE+AA+Q+ ++P + G V
Sbjct: 505 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 564
Query: 566 VLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMGDRKHKQADLIYQ 625
LSN+YA R W+ V EVR M E G++K+ GCS +E+ + F++GD+ H + + I +
Sbjct: 565 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIER 624
Query: 626 KLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWHSEKLALCFALMN--EGSRICIIK 685
+++ + +LK G+ + L DL+++E +E + HSE++A+ + L++ +G+ + I K
Sbjct: 625 QVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITK 684
Query: 686 NLRICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSCSCKDYW 727
NLR C +CHA KL S++ DREI++RD RFHH++ G CSC DYW
Sbjct: 685 NLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
BLAST of Sed0012144 vs. ExPASy TrEMBL
Match:
A0A6J1H7U5 (pentatricopeptide repeat-containing protein At4g14820 OS=Cucurbita moschata OX=3662 GN=LOC111460103 PE=3 SV=1)
HSP 1 Score: 1355.1 bits (3506), Expect = 0.0e+00
Identity = 656/726 (90.36%), Postives = 697/726 (96.01%), Query Frame = 0
Query: 1 MEAISYPTSILPLQLPAYPTRPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLF 60
ME +S+ TSILPLQLP YPT+P ALSAALS+AT+L H+KQ+HAQILRSKF+RSDSDSLLF
Sbjct: 1 METLSHTTSILPLQLPPYPTKPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
Query: 61 KLILSSFSLSPSLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLS 120
KLILSS SLSPSLDYALSVFDQIP+PK+RFCNKLLRE+SRGSEPE ALFVY+KMRA+ LS
Sbjct: 61 KLILSSCSLSPSLDYALSVFDQIPEPKSRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
Query: 121 FDRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLV 180
DR CFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGL+RMY+AC RIMEARLV
Sbjct: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
Query: 181 FDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNL 240
FDKMS RDVVTWSIMIDGYCISG YDLAFQLFEEMKRTGLEPDEMILST+LSACARAGNL
Sbjct: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
Query: 241 DFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGL 300
DFGTK+HEFITKKN+VMD HLQSALI MYASCGS DLAWDLYEKISPKNMV+STAMVSGL
Sbjct: 241 DFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGL 300
Query: 301 AKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTML 360
AKGGQI DAR VFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ+LG+KPDVVTML
Sbjct: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKK 420
SVISACAHLGALDQAKWIQ YVDK GFGKALS++NALIDMYAKCGSLEGARE+FGKMPKK
Sbjct: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
Query: 421 NVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIF 480
NVISWTSMINA AMHGDAH ALSLFHQMKVENVEPNWITFVG+LYACSHGGLVEEGQRIF
Sbjct: 421 NVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIF 480
Query: 481 HSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDE 540
HSMINEYGISPKHEH+GCMVDLFGRA LLREALEV+EAMPFAPNAIIWGSLMAACQLH +
Sbjct: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGD 540
Query: 541 TELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEPDH+GALVVLSNIYAKER+WE+ GEVRKLMNEMGVSKERGCSRIE
Sbjct: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
Query: 601 LNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWH 660
LNNEVHEFQM DRKHKQADLIYQKL+EVVQ LKLAGYTP+TNCVL+DLD++EKKELVLWH
Sbjct: 601 LNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWH 660
Query: 661 SEKLALCFALMNEGSRICIIKNLRICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSC 720
SEKLALC+ALMNEGSRICIIKNLRIC+DCHAFMKLAS+VY REI++RDRTRFHHYR GSC
Sbjct: 661 SEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSC 720
Query: 721 SCKDYW 727
SCKDYW
Sbjct: 721 SCKDYW 726
BLAST of Sed0012144 vs. ExPASy TrEMBL
Match:
A0A6J1IE29 (pentatricopeptide repeat-containing protein At4g14820-like OS=Cucurbita maxima OX=3661 GN=LOC111474723 PE=3 SV=1)
HSP 1 Score: 1352.0 bits (3498), Expect = 0.0e+00
Identity = 655/726 (90.22%), Postives = 696/726 (95.87%), Query Frame = 0
Query: 1 MEAISYPTSILPLQLPAYPTRPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLF 60
ME +S+ TSILPLQLP YPTRP ALSAALS+AT+L H+KQ+HAQILRSKF+RSDSDSLLF
Sbjct: 1 METLSHTTSILPLQLPPYPTRPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
Query: 61 KLILSSFSLSPSLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLS 120
KLILSS +LSPSLDYALSVFDQIP+PKTRFCNKLLRE+SRGSEPE ALFVY+KMRA+ LS
Sbjct: 61 KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
Query: 121 FDRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLV 180
DR CFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGL+RMY+AC RIMEARLV
Sbjct: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
Query: 181 FDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNL 240
FDKMS RDVVTWSIMIDGYC+SG YDLAFQLFEEMKRTGLEPDEMILST+LSACARAGNL
Sbjct: 181 FDKMSQRDVVTWSIMIDGYCLSGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
Query: 241 DFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGL 300
DFGTKIHEFITKKN+VMD HLQSALI MYAS GS DLAWDLYEKISPKNMV+STAMVSGL
Sbjct: 241 DFGTKIHEFITKKNIVMDPHLQSALIKMYASYGSTDLAWDLYEKISPKNMVISTAMVSGL 300
Query: 301 AKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTML 360
AKGGQI DAR VFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ++G+KPDVVTML
Sbjct: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQMGMKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKK 420
SVISACAHLGALDQAKWIQ YVDK GFGKALS++NALIDMYAKCGSLEGARE+FGKMPKK
Sbjct: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
Query: 421 NVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIF 480
NVISWTSMINA AMHGDAHNALSLFHQMKVENVEPNWITFVG+LYACSHGGLV+EGQRIF
Sbjct: 421 NVISWTSMINALAMHGDAHNALSLFHQMKVENVEPNWITFVGLLYACSHGGLVKEGQRIF 480
Query: 481 HSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDE 540
HSMINEYGISPKHEH+GCMVDLFGRA LLREALEV+EAMPFAPNAIIWGSLMAACQLH +
Sbjct: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHSD 540
Query: 541 TELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEPDH+GALVVLSNIYAKER+WE+ GEVRKLMNEMGVSKERGCSRIE
Sbjct: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
Query: 601 LNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWH 660
LNNEVHEFQM DRKHKQADLIY KL+EVVQKLKLAGYTP+TNCVL+DLDE+EKKELVLWH
Sbjct: 601 LNNEVHEFQMADRKHKQADLIYHKLNEVVQKLKLAGYTPQTNCVLVDLDEEEKKELVLWH 660
Query: 661 SEKLALCFALMNEGSRICIIKNLRICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSC 720
SEKLALC+ALMNEGSRICI KNLRIC+DCHAFMKLAS+VY REI++RDRTRFHHYR GSC
Sbjct: 661 SEKLALCYALMNEGSRICITKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSC 720
Query: 721 SCKDYW 727
SCKDYW
Sbjct: 721 SCKDYW 726
BLAST of Sed0012144 vs. ExPASy TrEMBL
Match:
A0A6J1ICZ7 (pentatricopeptide repeat-containing protein At4g14820-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474723 PE=3 SV=1)
HSP 1 Score: 1343.2 bits (3475), Expect = 0.0e+00
Identity = 655/738 (88.75%), Postives = 696/738 (94.31%), Query Frame = 0
Query: 1 MEAISYPTSILPLQLPAYPTRPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLF 60
ME +S+ TSILPLQLP YPTRP ALSAALS+AT+L H+KQ+HAQILRSKF+RSDSDSLLF
Sbjct: 1 METLSHTTSILPLQLPPYPTRPNALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
Query: 61 KLILSSFSLSPSLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLS 120
KLILSS +LSPSLDYALSVFDQIP+PKTRFCNKLLRE+SRGSEPE ALFVY+KMRA+ LS
Sbjct: 61 KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFVYEKMRAEGLS 120
Query: 121 FDRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLV 180
DR CFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGL+RMY+AC RIMEARLV
Sbjct: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
Query: 181 FDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNL 240
FDKMS RDVVTWSIMIDGYC+SG YDLAFQLFEEMKRTGLEPDEMILST+LSACARAGNL
Sbjct: 181 FDKMSQRDVVTWSIMIDGYCLSGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNL 240
Query: 241 DFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGL 300
DFGTKIHEFITKKN+VMD HLQSALI MYAS GS DLAWDLYEKISPKNMV+STAMVSGL
Sbjct: 241 DFGTKIHEFITKKNIVMDPHLQSALIKMYASYGSTDLAWDLYEKISPKNMVISTAMVSGL 300
Query: 301 AKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTML 360
AKGGQI DAR VFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ++G+KPDVVTML
Sbjct: 301 AKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQMGMKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKK 420
SVISACAHLGALDQAKWIQ YVDK GFGKALS++NALIDMYAKCGSLEGARE+FGKMPKK
Sbjct: 361 SVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKK 420
Query: 421 NVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIF 480
NVISWTSMINA AMHGDAHNALSLFHQMKVENVEPNWITFVG+LYACSHGGLV+EGQRIF
Sbjct: 421 NVISWTSMINALAMHGDAHNALSLFHQMKVENVEPNWITFVGLLYACSHGGLVKEGQRIF 480
Query: 481 HSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDE 540
HSMINEYGISPKHEH+GCMVDLFGRA LLREALEV+EAMPFAPNAIIWGSLMAACQLH +
Sbjct: 481 HSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHSD 540
Query: 541 TELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEPDH+GALVVLSNIYAKER+WE+ GEVRKLMNEMGVSKERGCSRIE
Sbjct: 541 TELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIE 600
Query: 601 LNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWH 660
LNNEVHEFQM DRKHKQADLIY KL+EVVQKLKLAGYTP+TNCVL+DLDE+EKKELVLWH
Sbjct: 601 LNNEVHEFQMADRKHKQADLIYHKLNEVVQKLKLAGYTPQTNCVLVDLDEEEKKELVLWH 660
Query: 661 SEKLALCFALMNEGSR------------ICIIKNLRICDDCHAFMKLASEVYDREIIIRD 720
SEKLALC+ALMNEGSR ICI KNLRIC+DCHAFMKLAS+VY REI++RD
Sbjct: 661 SEKLALCYALMNEGSRICITKNLRICEGICITKNLRICEDCHAFMKLASKVYAREIVVRD 720
Query: 721 RTRFHHYRGGSCSCKDYW 727
RTRFHHYR GSCSCKDYW
Sbjct: 721 RTRFHHYRDGSCSCKDYW 738
BLAST of Sed0012144 vs. ExPASy TrEMBL
Match:
A0A6J1C8N9 (pentatricopeptide repeat-containing protein At4g14820 OS=Momordica charantia OX=3673 GN=LOC111009402 PE=3 SV=1)
HSP 1 Score: 1293.1 bits (3345), Expect = 0.0e+00
Identity = 625/726 (86.09%), Postives = 681/726 (93.80%), Query Frame = 0
Query: 1 MEAISYPTSILPLQLPAYPTRPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLF 60
ME +S+ TS LPLQ A+ TRPT L+AAL++A+TL HLKQ+H QILRSKF+R DSDSLLF
Sbjct: 1 METLSHSTSALPLQYHAFSTRPTTLAAALASASTLLHLKQVHVQILRSKFERYDSDSLLF 60
Query: 61 KLILSSFSLSPSLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLS 120
KL+LSS +LS SLDYALSVFDQIP+PKTRFCNKLLRE+SRG +PE ALFVY+KMRA+ LS
Sbjct: 61 KLVLSSCALSSSLDYALSVFDQIPEPKTRFCNKLLRELSRGPKPENALFVYEKMRAEGLS 120
Query: 121 FDRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLV 180
DR FPP+LKAASRNLSLRTGMEIHGLASKLGFG DPFVETGLVRMY+ACGR+MEARLV
Sbjct: 121 LDRFSFPPILKAASRNLSLRTGMEIHGLASKLGFGPDPFVETGLVRMYAACGRLMEARLV 180
Query: 181 FDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNL 240
FDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRT +EPDEMILST++SACARAGNL
Sbjct: 181 FDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTDMEPDEMILSTIISACARAGNL 240
Query: 241 DFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGL 300
D+GT+IHEFITKKN+VMD HLQSALITMYASCGS+DLAWDLYEKISPKNMVVSTAMVSGL
Sbjct: 241 DYGTRIHEFITKKNIVMDPHLQSALITMYASCGSMDLAWDLYEKISPKNMVVSTAMVSGL 300
Query: 301 AKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTML 360
+K GQI DAR VFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ LGIKPDVVTML
Sbjct: 301 SKCGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQLLGIKPDVVTML 360
Query: 361 SVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKK 420
SVISACAHLGAL+QA WI +YVDK GF KALSV+NALIDMYAKCGSLEGAREVF KMPKK
Sbjct: 361 SVISACAHLGALEQANWICTYVDKNGFDKALSVNNALIDMYAKCGSLEGAREVFKKMPKK 420
Query: 421 NVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIF 480
NVISWT MINA AMHGD+HNAL+LFHQMK ENVEPNWITFVGVLYACSHGGLVEEG++IF
Sbjct: 421 NVISWTCMINASAMHGDSHNALNLFHQMKDENVEPNWITFVGVLYACSHGGLVEEGRKIF 480
Query: 481 HSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDE 540
HSMIN+YGISPKHEH+GCMVDLFGRANLLREALE+IEAMPFAPNAIIWGSLMAACQ++ E
Sbjct: 481 HSMINDYGISPKHEHFGCMVDLFGRANLLREALEMIEAMPFAPNAIIWGSLMAACQVYGE 540
Query: 541 TELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIE 600
TELGEFAAKQVLKLEP+H+GA VVLSN+YAKER+WE+VGEVRKLMNEMGV+KERGCSR+E
Sbjct: 541 TELGEFAAKQVLKLEPNHDGAFVVLSNVYAKERRWEDVGEVRKLMNEMGVAKERGCSRVE 600
Query: 601 LNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWH 660
LNNEVHEFQM DRKH+QAD IYQKLDEVVQKLK+AGYTPR +CVL+DLDE+E+KE +LWH
Sbjct: 601 LNNEVHEFQMADRKHRQADQIYQKLDEVVQKLKMAGYTPRVDCVLVDLDEEERKEAILWH 660
Query: 661 SEKLALCFALMNEGSRICIIKNLRICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSC 720
SEKLALC+ALMNEGS I IIKNLRIC+DCH FMKLAS+VY REIIIRDRTRFHHYR GSC
Sbjct: 661 SEKLALCYALMNEGSHIRIIKNLRICEDCHTFMKLASKVYAREIIIRDRTRFHHYRDGSC 720
Query: 721 SCKDYW 727
SC DYW
Sbjct: 721 SCNDYW 726
BLAST of Sed0012144 vs. ExPASy TrEMBL
Match:
A0A438KLK6 (Pentatricopeptide repeat-containing protein OS=Vitis vinifera OX=29760 GN=PCMP-H3_3 PE=3 SV=1)
HSP 1 Score: 1048.9 bits (2711), Expect = 9.8e-303
Identity = 509/716 (71.09%), Postives = 602/716 (84.08%), Query Frame = 0
Query: 16 PAYPTRPTA---LSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLFKLILSSFSLSPS 75
PA PT + L +ALS+AT+L HLKQ+HAQILRSK DR S SLL KL++SS +LS S
Sbjct: 14 PATPTTHHSHHTLFSALSSATSLTHLKQVHAQILRSKLDR--STSLLVKLVISSCALSSS 73
Query: 76 LDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLSFDRSCFPPLLKA 135
LDYALSVF+ IP P+T CN+ LRE+SR EPE L VY++MR L+ DR FPPLLKA
Sbjct: 74 LDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRKQGLAVDRFSFPPLLKA 133
Query: 136 ASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLVFDKMSHRDVVTW 195
SR SL G+EIHGLA+KLGF SDPFV+TGLVRMY+ACGRI EARL+FDKM HRDVVTW
Sbjct: 134 LSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTW 193
Query: 196 SIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNLDFGTKIHEFITK 255
SIMIDGYC SG ++ A LFEEMK +EPDEM+LSTVLSAC RAGNL +G IH+FI +
Sbjct: 194 SIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIME 253
Query: 256 KNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGLAKGGQISDARRV 315
N+V+D HLQSAL+TMYASCGS+DLA +L+EK++PKN+V STAMV+G +K GQI +AR V
Sbjct: 254 NNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSV 313
Query: 316 FDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTMLSVISACAHLGAL 375
F+QMV+KDL+CWSAMISGY ESD PQEAL LF +MQ LGIKPD VTMLSVI+ACAHLGAL
Sbjct: 314 FNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGAL 373
Query: 376 DQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKKNVISWTSMINAF 435
DQAKWI +VDK GFG AL ++NALI+MYAKCGSLE AR +F KMP+KNVISWT MI+AF
Sbjct: 374 DQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAF 433
Query: 436 AMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIFHSMINEYGISPK 495
AMHGDA +AL FHQM+ EN+EPN ITFVGVLYACSH GLVEEG++IF+SMINE+ I+PK
Sbjct: 434 AMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPK 493
Query: 496 HEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDETELGEFAAKQVL 555
H HYGCMVDLFGRANLLREALE++EAMP APN IIWGSLMAAC++H E ELGEFAAK++L
Sbjct: 494 HVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEVELGEFAAKRLL 553
Query: 556 KLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMGD 615
+L+PDH+GA V LSNIYAK ++WE+VG+VRKLM G+SKERGCSRIELNNE+HEF + D
Sbjct: 554 ELDPDHDGAHVFLSNIYAKAKRWEDVGQVRKLMKHKGISKERGCSRIELNNEIHEFLVAD 613
Query: 616 RKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWHSEKLALCFALMN 675
R HK AD IY+KLDEVV KLKL GY+P T +L+DL+E+EKKE+VLWHSEKLALC+ LM
Sbjct: 614 RSHKHADEIYEKLDEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMR 673
Query: 676 EGSRIC--IIKNLRICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSCSCKDYW 727
+G+ C I KNLR+C+DCH F+KLAS+VY+REI++RDRTRFHHY+ G CSCKDYW
Sbjct: 674 DGTGSCIHINKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
BLAST of Sed0012144 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 846.7 bits (2186), Expect = 1.4e-245
Identity = 415/725 (57.24%), Postives = 541/725 (74.62%), Query Frame = 0
Query: 11 LPLQLPAYPTRPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLFKLILSSFSLS 70
+ L P T + LS +L H+KQLHA ILR+ + +S LF L +SS S+
Sbjct: 1 MTLPPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHK-LNSFLFNLSVSSSSI- 60
Query: 71 PSLDYALSVFDQIPD-PKTRFCNKLLREVSRGSEPEIALFVYQKMRADNLSFDRSCFPPL 130
+L YAL+VF IP P++ N LR++SR SEP + YQ++R D+ F P+
Sbjct: 61 -NLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPI 120
Query: 131 LKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLVFDKMSHRDV 190
LKA S+ +L GME+HG+A K+ DPFVETG + MY++CGRI AR VFD+MSHRDV
Sbjct: 121 LKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 180
Query: 191 VTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARAGNLDFGTKIHEF 250
VTW+ MI+ YC G D AF+LFEEMK + + PDEMIL ++SAC R GN+ + I+EF
Sbjct: 181 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF 240
Query: 251 ITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMVSGLAKGGQISDA 310
+ + ++ MD HL +AL+TMYA G +D+A + + K+S +N+ VSTAMVSG +K G++ DA
Sbjct: 241 LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDA 300
Query: 311 RRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQELGIKPDVVTMLSVISACAHL 370
+ +FDQ +KDL+CW+ MIS Y ESD PQEAL +F++M GIKPDVV+M SVISACA+L
Sbjct: 301 QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANL 360
Query: 371 GALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGKMPKKNVISWTSMI 430
G LD+AKW+ S + G LS++NALI+MYAKCG L+ R+VF KMP++NV+SW+SMI
Sbjct: 361 GILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMI 420
Query: 431 NAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEGQRIFHSMINEYGI 490
NA +MHG+A +ALSLF +MK ENVEPN +TFVGVLY CSH GLVEEG++IF SM +EY I
Sbjct: 421 NALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNI 480
Query: 491 SPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQLHDETELGEFAAK 550
+PK EHYGCMVDLFGRANLLREALEVIE+MP A N +IWGSLM+AC++H E ELG+FAAK
Sbjct: 481 TPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAK 540
Query: 551 QVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGCSRIELNNEVHEFQ 610
++L+LEPDH+GALV++SNIYA+E++WE+V +R++M E V KE+G SRI+ N + HEF
Sbjct: 541 RILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFL 600
Query: 611 MGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWHSEKLALCFA 670
+GD++HKQ++ IY KLDEVV KLKLAGY P VL+D++E+EKK+LVLWHSEKLALCF
Sbjct: 601 IGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFG 660
Query: 671 LMNEGSR--------ICIIKNLRICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSCS 727
LMNE I I+KNLR+C+DCH F KL S+VY+REII+RDRTRFH Y+ G CS
Sbjct: 661 LMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCS 720
BLAST of Sed0012144 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 601.7 bits (1550), Expect = 8.0e-172
Identity = 306/733 (41.75%), Postives = 464/733 (63.30%), Query Frame = 0
Query: 12 PLQLPAY-----PTRPTALS------AALSAATTLRHLKQLHAQILRS-KFDRSDSDSLL 71
PL LP + P +PT + + + +LR LKQ H ++R+ F S S L
Sbjct: 9 PLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKL 68
Query: 72 FKL-ILSSFSLSPSLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADN 131
F + LSSF+ SL+YA VFD+IP P + N L+R + G +P ++++ + M +++
Sbjct: 69 FAMAALSSFA---SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 128
Query: 132 LSF-DRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEA 191
+ ++ FP L+KAA+ SL G +HG+A K GSD FV L+ Y +CG + A
Sbjct: 129 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 188
Query: 192 RLVFDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTGLEPDEMILSTVLSACARA 251
VF + +DVV+W+ MI+G+ G D A +LF++M+ ++ + + VLSACA+
Sbjct: 189 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 248
Query: 252 GNLDFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLAWDLYEKISPKNMVVSTAMV 311
NL+FG ++ +I + + ++ L +A++ MY CGSI+ A L++ + K+ V T M+
Sbjct: 249 RNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 308
Query: 312 SGLAKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ-ELGIKPDV 371
G A AR V + M +KD++ W+A+IS Y ++ P EAL++F ++Q + +K +
Sbjct: 309 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQ 368
Query: 372 VTMLSVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNALIDMYAKCGSLEGAREVFGK 431
+T++S +SACA +GAL+ +WI SY+ K G V++ALI MY+KCG LE +REVF
Sbjct: 369 ITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 428
Query: 432 MPKKNVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNWITFVGVLYACSHGGLVEEG 491
+ K++V W++MI AMHG + A+ +F++M+ NV+PN +TF V ACSH GLV+E
Sbjct: 429 VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 488
Query: 492 QRIFHSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIEAMPFAPNAIIWGSLMAACQ 551
+ +FH M + YGI P+ +HY C+VD+ GR+ L +A++ IEAMP P+ +WG+L+ AC+
Sbjct: 489 ESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACK 548
Query: 552 LHDETELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWENVGEVRKLMNEMGVSKERGC 611
+H L E A ++L+LEP ++GA V+LSNIYAK KWENV E+RK M G+ KE GC
Sbjct: 549 IHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGC 608
Query: 612 SRIELNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGYTPRTNCVLIDLDEDEKKEL 671
S IE++ +HEF GD H ++ +Y KL EV++KLK GY P + VL ++E+E KE
Sbjct: 609 SSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQ 668
Query: 672 VL-WHSEKLALCFALMNEGSR--ICIIKNLRICDDCHAFMKLASEVYDREIIIRDRTRFH 727
L HSEKLA+C+ L++ + I +IKNLR+C DCH+ KL S++YDREII+RDR RFH
Sbjct: 669 SLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFH 728
BLAST of Sed0012144 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 545.8 bits (1405), Expect = 5.2e-155
Identity = 299/762 (39.24%), Postives = 445/762 (58.40%), Query Frame = 0
Query: 5 SYPTSILPLQL-PAYPT-RPTALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLFKL 64
SYP LP P Y + R + L TL+ L+ +HAQ++ K +++ L KL
Sbjct: 14 SYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMI--KIGLHNTNYALSKL 73
Query: 65 ILSSFSLSP---SLDYALSVFDQIPDPKTRFCNKLLREVSRGSEPEIALFVYQKMRADNL 124
I LSP L YA+SVF I +P N + R + S+P AL +Y M + L
Sbjct: 74 I-EFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGL 133
Query: 125 SFDRSCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARL 184
+ FP +LK+ +++ + + G +IHG KLG D +V T L+ MY GR+ +A
Sbjct: 134 LPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHK 193
Query: 185 VFDKMSHR-------------------------------DVVTWSIMIDGYCISGCYDLA 244
VFDK HR DVV+W+ MI GY +G Y A
Sbjct: 194 VFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEA 253
Query: 245 FQLFEEMKRTGLEPDEMILSTVLSACARAGNLDFGTKIHEFITKKNMVMDFHLQSALITM 304
+LF++M +T + PDE + TV+SACA++G+++ G ++H +I + + +ALI +
Sbjct: 254 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDL 313
Query: 305 YASCGSIDLAWDLYEKISPKNMVVSTAMVSGLAKGGQISDARRVFDQMVEKDLICWSAMI 364
Y+ CG ++ A L+E++ KD+I W+ +I
Sbjct: 314 YSKCGELETACGLFERLP-------------------------------YKDVISWNTLI 373
Query: 365 SGYTESDCPQEALVLFKKMQELGIKPDVVTMLSVISACAHLGALDQAKWIQSYVDK--KG 424
GYT + +EAL+LF++M G P+ VTMLS++ ACAHLGA+D +WI Y+DK KG
Sbjct: 374 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 433
Query: 425 FGKALSVSNALIDMYAKCGSLEGAREVFGKMPKKNVISWTSMINAFAMHGDAHNALSLFH 484
A S+ +LIDMYAKCG +E A +VF + K++ SW +MI FAMHG A + LF
Sbjct: 434 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS 493
Query: 485 QMKVENVEPNWITFVGVLYACSHGGLVEEGQRIFHSMINEYGISPKHEHYGCMVDLFGRA 544
+M+ ++P+ ITFVG+L ACSH G+++ G+ IF +M +Y ++PK EHYGCM+DL G +
Sbjct: 494 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHS 553
Query: 545 NLLREALEVIEAMPFAPNAIIWGSLMAACQLHDETELGEFAAKQVLKLEPDHNGALVVLS 604
L +EA E+I M P+ +IW SL+ AC++H ELGE A+ ++K+EP++ G+ V+LS
Sbjct: 554 GLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLS 613
Query: 605 NIYAKERKWENVGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMGDRKHKQADLIYQKLD 664
NIYA +W V + R L+N+ G+ K GCS IE+++ VHEF +GD+ H + IY L+
Sbjct: 614 NIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLE 673
Query: 665 EVVQKLKLAGYTPRTNCVLIDLDEDEKKELVLWHSEKLALCFALMN--EGSRICIIKNLR 724
E+ L+ AG+ P T+ VL +++E+ K+ + HSEKLA+ F L++ G+++ I+KNLR
Sbjct: 674 EMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLR 733
Query: 725 ICDDCHAFMKLASEVYDREIIIRDRTRFHHYRGGSCSCKDYW 727
+C +CH KL S++Y REII RDRTRFHH+R G CSC DYW
Sbjct: 734 VCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Sed0012144 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 516.2 bits (1328), Expect = 4.4e-146
Identity = 281/811 (34.65%), Postives = 435/811 (53.64%), Query Frame = 0
Query: 24 ALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLFKLILSSFSLS--PSLDYALSVFD 83
A ++L T+ LK H + + D + S + KL+ S L SL +A VF+
Sbjct: 34 ATPSSLKNCKTIDELKMFHRSLTKQGLD--NDVSTITKLVARSCELGTRESLSFAKEVFE 93
Query: 84 QIPDPKTRFC-NKLLREVSRGSEPEIALFVYQKMRADNLSFDRSCFPPLLKAASRNLSLR 143
T F N L+R + A+ ++ +M +S D+ FP L A +++ +
Sbjct: 94 NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 153
Query: 144 TGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLVFDKMSHRDVVTWSIMIDGYC 203
G++IHGL K+G+ D FV+ LV Y+ CG + AR VFD+MS R+VV+W+ MI GY
Sbjct: 154 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 213
Query: 204 -------------------------------ISGC------------------------- 263
IS C
Sbjct: 214 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 273
Query: 264 ---------------YDLAFQLFEE-------------------------------MKRT 323
D+A +LF+E M +
Sbjct: 274 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 333
Query: 324 GLEPDEMILSTVLSACARAGNLDFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLA 383
G+ PD + + + +S+C++ N+ +G H ++ + ++ +ALI MY C D A
Sbjct: 334 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 393
Query: 384 WDLYEKISPKNMVVSTAMVSGLAKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQ 443
+ +++++S K +V ++V+G + G++ A F+ M EK+++ W+ +ISG + +
Sbjct: 394 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 453
Query: 444 EALVLFKKMQ-ELGIKPDVVTMLSVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNAL 503
EA+ +F MQ + G+ D VTM+S+ SAC HLGALD AKWI Y++K G + + L
Sbjct: 454 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 513
Query: 504 IDMYAKCGSLEGAREVFGKMPKKNVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNW 563
+DM+++CG E A +F + ++V +WT+ I A AM G+A A+ LF M + ++P+
Sbjct: 514 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 573
Query: 564 ITFVGVLYACSHGGLVEEGQRIFHSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIE 623
+ FVG L ACSHGGLV++G+ IF+SM+ +G+SP+ HYGCMVDL GRA LL EA+++IE
Sbjct: 574 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 633
Query: 624 AMPFAPNAIIWGSLMAACQLHDETELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWEN 683
MP PN +IW SL+AAC++ E+ +AA+++ L P+ G+ V+LSN+YA +W +
Sbjct: 634 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 693
Query: 684 VGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGY 727
+ +VR M E G+ K G S I++ + HEF GD H + I LDEV Q+ G+
Sbjct: 694 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 753
BLAST of Sed0012144 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 511.9 bits (1317), Expect = 8.3e-145
Identity = 280/810 (34.57%), Postives = 434/810 (53.58%), Query Frame = 0
Query: 24 ALSAALSAATTLRHLKQLHAQILRSKFDRSDSDSLLFKLILSSFSLS--PSLDYALSVFD 83
A ++L T+ LK H + + D + S + KL+ S L SL +A VF+
Sbjct: 34 ATPSSLKNCKTIDELKMFHRSLTKQGLD--NDVSTITKLVARSCELGTRESLSFAKEVFE 93
Query: 84 QIPDPKTRFC-NKLLREVSRGSEPEIALFVYQKMRADNLSFDRSCFPPLLKAASRNLSLR 143
T F N L+R + A+ ++ +M +S D+ FP L A +++ +
Sbjct: 94 NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 153
Query: 144 TGMEIHGLASKLGFGSDPFVETGLVRMYSACGRIMEARLVFDKMSHRDVVTWSIMIDGYC 203
G++IHGL K+G+ D FV+ LV Y+ CG + AR VFD+MS R+VV+W+ MI GY
Sbjct: 154 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 213
Query: 204 -------------------------------ISGC------------------------- 263
IS C
Sbjct: 214 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 273
Query: 264 ---------------YDLAFQLFEE-------------------------------MKRT 323
D+A +LF+E M +
Sbjct: 274 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 333
Query: 324 GLEPDEMILSTVLSACARAGNLDFGTKIHEFITKKNMVMDFHLQSALITMYASCGSIDLA 383
G+ PD + + + +S+C++ N+ +G H ++ + ++ +ALI MY C D A
Sbjct: 334 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 393
Query: 384 WDLYEKISPKNMVVSTAMVSGLAKGGQISDARRVFDQMVEKDLICWSAMISGYTESDCPQ 443
+ +++++S K +V ++V+G + G++ A F+ M EK+++ W+ +ISG + +
Sbjct: 394 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 453
Query: 444 EALVLFKKMQ-ELGIKPDVVTMLSVISACAHLGALDQAKWIQSYVDKKGFGKALSVSNAL 503
EA+ +F MQ + G+ D VTM+S+ SAC HLGALD AKWI Y++K G + + L
Sbjct: 454 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 513
Query: 504 IDMYAKCGSLEGAREVFGKMPKKNVISWTSMINAFAMHGDAHNALSLFHQMKVENVEPNW 563
+DM+++CG E A +F + ++V +WT+ I A AM G+A A+ LF M + ++P+
Sbjct: 514 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 573
Query: 564 ITFVGVLYACSHGGLVEEGQRIFHSMINEYGISPKHEHYGCMVDLFGRANLLREALEVIE 623
+ FVG L ACSHGGLV++G+ IF+SM+ +G+SP+ HYGCMVDL GRA LL EA+++IE
Sbjct: 574 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 633
Query: 624 AMPFAPNAIIWGSLMAACQLHDETELGEFAAKQVLKLEPDHNGALVVLSNIYAKERKWEN 683
MP PN +IW SL+AAC++ E+ +AA+++ L P+ G+ V+LSN+YA +W +
Sbjct: 634 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 693
Query: 684 VGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMGDRKHKQADLIYQKLDEVVQKLKLAGY 726
+ +VR M E G+ K G S I++ + HEF GD H + I LDEV Q+ G+
Sbjct: 694 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 753
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6597439.1 | 0.0e+00 | 90.77 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022959359.1 | 0.0e+00 | 90.36 | pentatricopeptide repeat-containing protein At4g14820 [Cucurbita moschata] >XP_0... | [more] |
XP_022974384.1 | 0.0e+00 | 90.22 | pentatricopeptide repeat-containing protein At4g14820-like [Cucurbita maxima] >X... | [more] |
XP_023538947.1 | 0.0e+00 | 90.08 | pentatricopeptide repeat-containing protein At4g14820 [Cucurbita pepo subsp. pep... | [more] |
XP_022975407.1 | 0.0e+00 | 88.75 | pentatricopeptide repeat-containing protein At4g14820-like isoform X2 [Cucurbita... | [more] |
Match Name | E-value | Identity | Description | |
O23337 | 2.0e-244 | 57.24 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
O82380 | 1.1e-170 | 41.75 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 7.3e-154 | 39.24 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9LUJ2 | 6.2e-145 | 34.65 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Q9LTV8 | 2.4e-141 | 36.88 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1H7U5 | 0.0e+00 | 90.36 | pentatricopeptide repeat-containing protein At4g14820 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1IE29 | 0.0e+00 | 90.22 | pentatricopeptide repeat-containing protein At4g14820-like OS=Cucurbita maxima O... | [more] |
A0A6J1ICZ7 | 0.0e+00 | 88.75 | pentatricopeptide repeat-containing protein At4g14820-like isoform X2 OS=Cucurbi... | [more] |
A0A6J1C8N9 | 0.0e+00 | 86.09 | pentatricopeptide repeat-containing protein At4g14820 OS=Momordica charantia OX=... | [more] |
A0A438KLK6 | 9.8e-303 | 71.09 | Pentatricopeptide repeat-containing protein OS=Vitis vinifera OX=29760 GN=PCMP-H... | [more] |
Match Name | E-value | Identity | Description | |
AT4G14820.1 | 1.4e-245 | 57.24 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G29760.1 | 8.0e-172 | 41.75 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 5.2e-155 | 39.24 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.2 | 4.4e-146 | 34.65 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
AT3G22690.1 | 8.3e-145 | 34.57 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |