Sed0012103 (gene) Chayote v1

Overview


Name	Sed0012103
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-CH-type domain-containing protein
Location	LG01: 8517211 .. 8520434 (-)
RNA-Seq Expression	Sed0012103
Synteny	Sed0012103

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTCTTTTGCATCTCCTTCAATAATCTTTGTTTTTTTTTTTTACTACGTATTAGGAAAAAGGGAACAAATACAAATTGTAATCATTCGATTCAATAATCTCTGTTCTTAGCCAAGCTTTTTTTTCTCTCAGTTTATTGTTTTTAATTTAAAGTTTCCTTTTCTCTTCCAACAACAGCCGAAACTGACACTCCGAGACAGAGCTTCACAGTGTGCCTGTTATTTGTTGGAGAGAAGACCCCACGTTTGATCTTTCTCTTAATGGGTTTTTATCACACACTAATCTGTAATGGGTTTTAATCTTCCGAGTGTGACGAAAATTTCATACTCATGTTTTTGGAATGGATTCTGAATTTCGATTTCGTATGGTACATTCTGAAATCTTTATGGAAACTGTACATGATTGTCACTAAATTGGGGGAAAAGGGTTTAATCTTTTGAGTTTCGCCATTTTTGCATCTGGGTTTCACAGGATGTCGTCGGCGATTGAAATTCCCAGTTCCCTGTCGTTTCGCGATGCTCATTCAGCAGCTGATAGCAGCAGCGACATGTCGGAACCTGACGATTCCGACGGCCAGTCGTGGCACTCGGCTGTCGACTCCACGGCCTGGGGATCTGACGGCGAGGGCCAGTTTTCCGGCGAGATAGAGGGCGTTCCGGCCGCCGAGGTGGATTTGGAGGCGAATGTGCATTTGGGAAGGGTTGAAAGGAATTGCAGGATTTGTCACTTGGAGCTTGAAAGCGGTGGAGGAACAGATTCTGATTCTTCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTATTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAGATCAAGGGAAATACGTGAGTAATTGTTCTGATAAACTTTTAATTTTTCCTTCTGAAACTTTGTTATTTGATTCTGTCTCTTCGTGTTCTTTTCATCACTTTGAGTCTATTGAATTTTGTTATTTAATTGTTATTCTTACATATGAAAGTTAGGATGCACGCATGATAAGTTTCACGAGTTTACAACCTTGCTTTTGATCATCAACGATTCTGTAAATTTATTATGACTATTGACTTGACATGTGATTTTTATTTTCTTGAGTTGTCCGAGCTAGCTAATGTGCGCCTCATTTGTTGTCAAATTGACCCTACATTGTTTGGGTGCCAAGGAAATTAGTAGTTAATTCATTTATAAGTAGGCGACCACTAAAGATTGCTCATACGAAATTCATTTTTTCAAATGCTTTCGTAAATCCTCTTTCTAAAACCAGGTTTTGAGAGAGCTTGGTTGTGTCACCTGCTCTTTGATTTTGTTTGGCTGACAAGCTCGTTGGGTTAGATCATGACAGTTCTTGATAGAGGCATATGCCGTCACAAAGTGGTTATTTGATTCAAATAGTGAGCCCATGGAAGAGCGGCCTTAAGAGGTGTGAGAGAGTAAACCCTCTCACCCGTAGCGACGATATAGACTATCAACTTGCCTCTCTTATGAGTTGGGGAGGAGACCGATTGAGGAGTGAAGCGGGGATCGTAGGCCTTTCCCATCAAAAAGTTAAAATTCGTGGTCAAGGCTACATCATCAAAATAAGTATCACTAGAGATCGTGCTTCTCATGCTAAGGGGCCTATCATGTATGTAAGTGCCTGAGTTGGACGATCCTCGAAGATGTTAAGGATACCATTGACATGATAAGAAGAATTGAGTTCTTTCCGTGCTTAGATCTTCGTGAAGTAGTAAACTCAATTAAGGTAGATTTATCTGTCCTAGTTTCTTAGCTGTTCAAATTTAGCATCCGTTAGTGTCATGTAGATAAGATGAAGAATATCTTTTTTTCATTGATGAATGAAAAAGTTACCATACGGGACCTATCGAAATAAAGTACAAATAGAAACCTTCATAGTAAAGGAGGAACGCCTACAAAGGATCAGAAACACGAAACTAAAACAGGTAGAAGATGACAATTATTATGGCTTTCATAGTGTTAAAGCTGAAGAGATGCGAAGTACAGACAAATCTGAACATCCAAGAGACAAAAAAAGGCATATAGCCCAAAGCAAGAGCTTGTTATGGACTCCGACTCTCCTCATTAATCTGTGGATTCCCATCTTTGATGAGAGGATGATAACAATAAAGAGAGTAAGCGAAAGTGAAAGAATTTGCAATGGAACACATCATGATCATGGTTGTGTTCGATTCGAAAACCCTGTGTAGGAAACTCTGTACACAAAAAGAGCCGCTCGATCTTCTGTAGCATAACTGGTTGAATATCTTCTCCTTTTTTCCTTTACATTTCAATAATATGAATGTGTTACACTCAAAGGTCTAGTTACAAACTTGTCCGTGCCTAATCTGCTTCATCTTCTTTGTTATAACATAGATCAGATTACGTGTGTTCTTTTTTCTGACGAATTGGACAAACGAATCAGATTTCTAGCTAGCAACCTTTATATAACTAGATTTTGAGTGTAAAGCTTCACTATTGAGAATGAGTATGTTGTGATAAAAGTTAATGTCTTTTCATATTGCAAGGTTGCTGATGGTTGGTTCATCGGCCAAAAACGGGAAAAAATCGAAAGTGACTTATCTATGATCTATTTTTGTTCTATTATTGTTCGATCGAGCACATACTATTCTCGAGCATGAAATTATCGTCTATATATCTAGGAGTCGTAAGCTCATTTAACTCTCTGCATAGGAACTTCTAACCAACCAAATTTAGATTATTTGCTGGATGAGGTATATCAAATCGTTATGGTAGATGACATTGTTGTTATGACTGTTAACTTGACAATCAACATGATCTTTTCCTGGCAGAATTTGCGAGATATGTGGGTCAACTGCACAAAATGTTGCAAGTCGACAAATAAATGGACCAAGCAATCTGGTTCTGGGCATTGTAAACTTTCTTCTTGCTTGCATGCTCTTTGCATTTGGGTTTTTTCACTTCAAGTGAATGCCATAAACTTTAGGAAGATCACTTACACCTACTAAAGGAAGAAAATTAGTGAAGATTGAGATTTTGGGTTCTTCAGGCTTTTGTTTACATTTACACTTCAGTGTGTTTAGTTAATTTTGATGAGGTTTTGTATCATTAGGCATTTATTTCTTAGTTGTGGTATGGTGAAAGCTTAGGGATCTATTAAGGATAAGTACATCTCACTATATATATGTGGCTCGATTTTTTTGCCCTTACAAGAGCCACAAGAAGAGAGGACAGACTTGAG

mRNA sequence

AGTTCTTTTGCATCTCCTTCAATAATCTTTGTTTTTTTTTTTTACTACGTATTAGGAAAAAGGGAACAAATACAAATTGTAATCATTCGATTCAATAATCTCTGTTCTTAGCCAAGCTTTTTTTTCTCTCAGTTTATTGTTTTTAATTTAAAGTTTCCTTTTCTCTTCCAACAACAGCCGAAACTGACACTCCGAGACAGAGCTTCACAGTGTGCCTGTTATTTGTTGGAGAGAAGACCCCACGTTTGATCTTTCTCTTAATGGGTTTTTATCACACACTAATCTGTAATGGGTTTTAATCTTCCGAGTGTGACGAAAATTTCATACTCATGTTTTTGGAATGGATTCTGAATTTCGATTTCGTATGGATGTCGTCGGCGATTGAAATTCCCAGTTCCCTGTCGTTTCGCGATGCTCATTCAGCAGCTGATAGCAGCAGCGACATGTCGGAACCTGACGATTCCGACGGCCAGTCGTGGCACTCGGCTGTCGACTCCACGGCCTGGGGATCTGACGGCGAGGGCCAGTTTTCCGGCGAGATAGAGGGCGTTCCGGCCGCCGAGGTGGATTTGGAGGCGAATGTGCATTTGGGAAGGGTTGAAAGGAATTGCAGGATTTGTCACTTGGAGCTTGAAAGCGGTGGAGGAACAGATTCTGATTCTTCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTATTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAGATCAAGGGAAATACAATTTGCGAGATATGTGGGTCAACTGCACAAAATGTTGCAAGTCGACAAATAAATGGACCAAGCAATCTGGTTCTGGGCATTGTAAACTTTCTTCTTGCTTGCATGCTCTTTGCATTTGGGTTTTTTCACTTCAAGTGAATGCCATAAACTTTAGGAAGATCACTTACACCTACTAAAGGAAGAAAATTAGTGAAGATTGAGATTTTGGGTTCTTCAGGCTTTTGTTTACATTTACACTTCAGTGTGTTTAGTTAATTTTGATGAGGTTTTGTATCATTAGGCATTTATTTCTTAGTTGTGGTATGGTGAAAGCTTAGGGATCTATTAAGGATAAGTACATCTCACTATATATATGTGGCTCGATTTTTTTGCCCTTACAAGAGCCACAAGAAGAGAGGACAGACTTGAG

Coding sequence (CDS)

ATGTTTTTGGAATGGATTCTGAATTTCGATTTCGTATGGATGTCGTCGGCGATTGAAATTCCCAGTTCCCTGTCGTTTCGCGATGCTCATTCAGCAGCTGATAGCAGCAGCGACATGTCGGAACCTGACGATTCCGACGGCCAGTCGTGGCACTCGGCTGTCGACTCCACGGCCTGGGGATCTGACGGCGAGGGCCAGTTTTCCGGCGAGATAGAGGGCGTTCCGGCCGCCGAGGTGGATTTGGAGGCGAATGTGCATTTGGGAAGGGTTGAAAGGAATTGCAGGATTTGTCACTTGGAGCTTGAAAGCGGTGGAGGAACAGATTCTGATTCTTCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTATTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAGATCAAGGGAAATACAATTTGCGAGATATGTGGGTCAACTGCACAAAATGTTGCAAGTCGACAAATAAATGGACCAAGCAATCTGGTTCTGGGCATTGTAAACTTTCTTCTTGCTTGCATGCTCTTTGCATTTGGGTTTTTTCACTTCAAGTGA

Protein sequence

MFLEWILNFDFVWMSSAIEIPSSLSFRDAHSAADSSSDMSEPDDSDGQSWHSAVDSTAWGSDGEGQFSGEIEGVPAAEVDLEANVHLGRVERNCRICHLELESGGGTDSDSSIQLGCCCRGDLGIAHKQCAETWFKIKGNTICEICGSTAQNVASRQINGPSNLVLGIVNFLLACMLFAFGFFHFK

Homology

[Close]

BLAST of Sed0012103 vs. NCBI nr
Match: XP_038895035.1 (uncharacterized protein LOC120083374 [Benincasa hispida] >XP_038895036.1 uncharacterized protein LOC120083374 [Benincasa hispida])

HSP 1 Score: 238.4 bits (607), Expect = 4.9e-59
Identity = 133/210 (63.33%), Postives = 143/210 (68.10%), Query Frame = 0


Query: 21  PSSLSFRDAHSAADSSSDMSEPDDSDGQSWHSAVDSTAWGSDGEGQFSGEIEGVPAAEV- 80
           PSS+ FRDA SAA S SDMS  DDSD QSWHS  DSTAWGS GEGQFSGEIEGVP AE+ 
Sbjct: 16  PSSVLFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPDAEMG 75

Query: 81  ---------------DLEANVHLGRVERNCRICHLELESGGGTDS-DSSIQLGCCCRGDL 140
                          DLE  VHLG++ER+CRICHLELESGGG D+ D+ IQLGCCCRGDL
Sbjct: 76  HFISECSSEVDLESGDLEVKVHLGKIERDCRICHLELESGGGRDNFDTPIQLGCCCRGDL 135

Query: 141 GIAHKQCAETWFKIKGNTICEICGSTAQNVASRQINGPSNLVLG---------------- 187
           G AHKQCAETWFKIKGNTICEICG+TAQNVAS+QIN PSN V                  
Sbjct: 136 GTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAAVPSSALTAPLTLVET 195

[Close]

BLAST of Sed0012103 vs. NCBI nr
Match: XP_011658411.1 (uncharacterized protein LOC101212160 isoform X2 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 6.4e-59
Identity = 134/210 (63.81%), Postives = 142/210 (67.62%), Query Frame = 0


Query: 21  PSSLSFRDAHSAADSSSDMSEPDDSDGQSWHSAVDSTAWGSDGEGQFSGEIEGVPAAEV- 80
           PSSL FRDA SAA S SDMS  DDSD QSWHS  DSTAWGS GEGQFSGEIEGVP AE+ 
Sbjct: 16  PSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPDAEMG 75

Query: 81  ---------------DLEANVHLGRVERNCRICHLELESGGGTD-SDSSIQLGCCCRGDL 140
                          DLE  VHLG++ER+CRICHLELES GG D SD+ IQLGCCCRGDL
Sbjct: 76  HFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDL 135

Query: 141 GIAHKQCAETWFKIKGNTICEICGSTAQNVASRQINGPSNLVL----------------- 187
           G AHKQCAETWFKIKGNTICEICG+TAQNVAS+QIN PSN V                  
Sbjct: 136 GTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLTLVET 195

[Close]

BLAST of Sed0012103 vs. NCBI nr
Match: XP_004145266.2 (uncharacterized protein LOC101212160 isoform X1 [Cucumis sativus] >KGN65776.1 hypothetical protein Csa_023291 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 6.4e-59
Identity = 134/210 (63.81%), Postives = 142/210 (67.62%), Query Frame = 0


Query: 21  PSSLSFRDAHSAADSSSDMSEPDDSDGQSWHSAVDSTAWGSDGEGQFSGEIEGVPAAEV- 80
           PSSL FRDA SAA S SDMS  DDSD QSWHS  DSTAWGS GEGQFSGEIEGVP AE+ 
Sbjct: 65  PSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPDAEMG 124

Query: 81  ---------------DLEANVHLGRVERNCRICHLELESGGGTD-SDSSIQLGCCCRGDL 140
                          DLE  VHLG++ER+CRICHLELES GG D SD+ IQLGCCCRGDL
Sbjct: 125 HFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDL 184

Query: 141 GIAHKQCAETWFKIKGNTICEICGSTAQNVASRQINGPSNLVL----------------- 187
           G AHKQCAETWFKIKGNTICEICG+TAQNVAS+QIN PSN V                  
Sbjct: 185 GTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLTLVET 244

[Close]

BLAST of Sed0012103 vs. NCBI nr
Match: XP_008457415.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X2 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 5.4e-58
Identity = 133/210 (63.33%), Postives = 141/210 (67.14%), Query Frame = 0


Query: 21  PSSLSFRDAHSAADSSSDMSEPDDSDGQSWHSAVDSTAWGSDGEGQFSGEIEGVPAAEV- 80
           PSSL FRDA SAA S SDMS  DDSD QSWHS  DSTAWGS GEGQFSGEIEGV  AE+ 
Sbjct: 16  PSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVLDAEMG 75

Query: 81  ---------------DLEANVHLGRVERNCRICHLELESGGGTD-SDSSIQLGCCCRGDL 140
                          DLE  VHLG++ER+CRICHLELES GG D SD+ IQLGCCCRGDL
Sbjct: 76  HFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDL 135

Query: 141 GIAHKQCAETWFKIKGNTICEICGSTAQNVASRQINGPSNLVLG---------------- 187
           G AHKQCAETWFKIKGNTICEICG+TAQNVAS+QIN PSN V                  
Sbjct: 136 GTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAAVASSALTAPLTLVET 195

[Close]

BLAST of Sed0012103 vs. NCBI nr
Match: XP_008457414.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X1 [Cucumis melo] >KAA0031780.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa] >TYJ97351.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa])

HSP 1 Score: 235.0 bits (598), Expect = 5.4e-58
Identity = 133/210 (63.33%), Postives = 141/210 (67.14%), Query Frame = 0


Query: 21  PSSLSFRDAHSAADSSSDMSEPDDSDGQSWHSAVDSTAWGSDGEGQFSGEIEGVPAAEV- 80
           PSSL FRDA SAA S SDMS  DDSD QSWHS  DSTAWGS GEGQFSGEIEGV  AE+ 
Sbjct: 64  PSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVLDAEMG 123

Query: 81  ---------------DLEANVHLGRVERNCRICHLELESGGGTD-SDSSIQLGCCCRGDL 140
                          DLE  VHLG++ER+CRICHLELES GG D SD+ IQLGCCCRGDL
Sbjct: 124 HFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDL 183

Query: 141 GIAHKQCAETWFKIKGNTICEICGSTAQNVASRQINGPSNLVLG---------------- 187
           G AHKQCAETWFKIKGNTICEICG+TAQNVAS+QIN PSN V                  
Sbjct: 184 GTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAAVASSALTAPLTLVET 243

[Close]

BLAST of Sed0012103 vs. ExPASy TrEMBL
Match: A0A0A0M0P0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527920 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 3.1e-59
Identity = 134/210 (63.81%), Postives = 142/210 (67.62%), Query Frame = 0


Query: 21  PSSLSFRDAHSAADSSSDMSEPDDSDGQSWHSAVDSTAWGSDGEGQFSGEIEGVPAAEV- 80
           PSSL FRDA SAA S SDMS  DDSD QSWHS  DSTAWGS GEGQFSGEIEGVP AE+ 
Sbjct: 65  PSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPDAEMG 124

Query: 81  ---------------DLEANVHLGRVERNCRICHLELESGGGTD-SDSSIQLGCCCRGDL 140
                          DLE  VHLG++ER+CRICHLELES GG D SD+ IQLGCCCRGDL
Sbjct: 125 HFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDL 184

Query: 141 GIAHKQCAETWFKIKGNTICEICGSTAQNVASRQINGPSNLVL----------------- 187
           G AHKQCAETWFKIKGNTICEICG+TAQNVAS+QIN PSN V                  
Sbjct: 185 GTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLTLVET 244

[Close]

BLAST of Sed0012103 vs. ExPASy TrEMBL
Match: A0A5D3BFF6 (E3 ubiquitin-protein ligase MARCH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001610 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.6e-58
Identity = 133/210 (63.33%), Postives = 141/210 (67.14%), Query Frame = 0


Query: 21  PSSLSFRDAHSAADSSSDMSEPDDSDGQSWHSAVDSTAWGSDGEGQFSGEIEGVPAAEV- 80
           PSSL FRDA SAA S SDMS  DDSD QSWHS  DSTAWGS GEGQFSGEIEGV  AE+ 
Sbjct: 64  PSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVLDAEMG 123

Query: 81  ---------------DLEANVHLGRVERNCRICHLELESGGGTD-SDSSIQLGCCCRGDL 140
                          DLE  VHLG++ER+CRICHLELES GG D SD+ IQLGCCCRGDL
Sbjct: 124 HFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDL 183

Query: 141 GIAHKQCAETWFKIKGNTICEICGSTAQNVASRQINGPSNLVLG---------------- 187
           G AHKQCAETWFKIKGNTICEICG+TAQNVAS+QIN PSN V                  
Sbjct: 184 GTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAAVASSALTAPLTLVET 243

[Close]

BLAST of Sed0012103 vs. ExPASy TrEMBL
Match: A0A1S3C517 (uncharacterized protein LOC103497107 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.6e-58
Identity = 133/210 (63.33%), Postives = 141/210 (67.14%), Query Frame = 0


Query: 21  PSSLSFRDAHSAADSSSDMSEPDDSDGQSWHSAVDSTAWGSDGEGQFSGEIEGVPAAEV- 80
           PSSL FRDA SAA S SDMS  DDSD QSWHS  DSTAWGS GEGQFSGEIEGV  AE+ 
Sbjct: 16  PSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVLDAEMG 75

Query: 81  ---------------DLEANVHLGRVERNCRICHLELESGGGTD-SDSSIQLGCCCRGDL 140
                          DLE  VHLG++ER+CRICHLELES GG D SD+ IQLGCCCRGDL
Sbjct: 76  HFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDL 135

Query: 141 GIAHKQCAETWFKIKGNTICEICGSTAQNVASRQINGPSNLVLG---------------- 187
           G AHKQCAETWFKIKGNTICEICG+TAQNVAS+QIN PSN V                  
Sbjct: 136 GTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAAVASSALTAPLTLVET 195

[Close]

BLAST of Sed0012103 vs. ExPASy TrEMBL
Match: A0A1S3C6R6 (uncharacterized protein LOC103497107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.6e-58
Identity = 133/210 (63.33%), Postives = 141/210 (67.14%), Query Frame = 0


Query: 21  PSSLSFRDAHSAADSSSDMSEPDDSDGQSWHSAVDSTAWGSDGEGQFSGEIEGVPAAEV- 80
           PSSL FRDA SAA S SDMS  DDSD QSWHS  DSTAWGS GEGQFSGEIEGV  AE+ 
Sbjct: 64  PSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVLDAEMG 123

Query: 81  ---------------DLEANVHLGRVERNCRICHLELESGGGTD-SDSSIQLGCCCRGDL 140
                          DLE  VHLG++ER+CRICHLELES GG D SD+ IQLGCCCRGDL
Sbjct: 124 HFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDL 183

Query: 141 GIAHKQCAETWFKIKGNTICEICGSTAQNVASRQINGPSNLVLG---------------- 187
           G AHKQCAETWFKIKGNTICEICG+TAQNVAS+QIN PSN V                  
Sbjct: 184 GTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAAVASSALTAPLTLVET 243

[Close]

BLAST of Sed0012103 vs. ExPASy TrEMBL
Match: A0A6J1I103 (uncharacterized protein LOC111469521 OS=Cucurbita maxima OX=3661 GN=LOC111469521 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 4.6e-55
Identity = 128/213 (60.09%), Postives = 139/213 (65.26%), Query Frame = 0


Query: 21  PSSLSFRDAHSAA---DSSSDMSEPDDSDGQSWHSAVDSTAWGSDGEGQFSGEIEGVPAA 80
           PSSL +RDA SAA    SSSD+S  DDSD QSWHS  DSTAWGS G+G FSGEIEGVP A
Sbjct: 16  PSSLPYRDARSAAGSSSSSSDLSVLDDSDDQSWHSVFDSTAWGSHGDGLFSGEIEGVPDA 75

Query: 81  EV----------------DLEANVHLGRVERNCRICHLELESGGGTD-SDSSIQLGCCCR 140
           E                 DLE  VHLG++ER+CRICHLELESGGG D +D+ I LGCCCR
Sbjct: 76  ETGGFISGSSSEVDLESGDLEVKVHLGKIERDCRICHLELESGGGRDYNDTPILLGCCCR 135

Query: 141 GDLGIAHKQCAETWFKIKGNTICEICGSTAQNVASRQINGPSNLVLG------------- 187
           GDLG AHK CAETWFKIKGNTICEICG+ AQNVAS+QIN PSNL                
Sbjct: 136 GDLGTAHKHCAETWFKIKGNTICEICGAAAQNVASQQINEPSNLAAAAVASSAMTAPLTL 195

[Close]

BLAST of Sed0012103 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-24
Identity = 65/147 (44.22%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 74  VPAAEVDLEAN-----VHLGRVERNCRICHLELESGGGTDSDSSIQLGCCCRGDLGIAHK 133
           V + E+DLE       VHL + ER+CRICH+ L++    +S   I+LGC C+ DL  AHK
Sbjct: 54  VCSVEIDLELGLPEKVVHLSQSERDCRICHMSLDA-ANLESGVPIELGCSCKADLAAAHK 113

Query: 134 QCAETWFKIKGNTICEICGSTAQNV----------ASRQINGPSNLVL------------ 186
            CAETWFKIKGN ICE+CGS A NV          +  + NG  NL L            
Sbjct: 114 HCAETWFKIKGNKICEVCGSIAGNVVGSVEVESEESRNEANGVENLTLRTSGPRLVEGRS 173

[Close]

BLAST of Sed0012103 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-19
Identity = 76/224 (33.93%), Postives = 92/224 (41.07%), Query Frame = 0


Query: 32  AADSSSDMSEPDDSDGQSWHSAVDSTAWGSDGEGQFSGEIEGVPAAEVDLEANVHLGRVE 91
           A  S   ++ P DS   S   ++D  +   D   Q   E  GVPA E  L +     R  
Sbjct: 5   AFGSHHHLANPTDSPPYSVEISIDGDSSDWDSLSQVDLESGGVPAPEKQLHSGGKKRRTR 64

Query: 92  --------------RNCRICHLELESGGGT---------DSDSS---------------- 151
                         R+CRICHL LE+             DSD                  
Sbjct: 65  RRKRRKKKKKKKGGRDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEE 124

Query: 152 -----IQLGCCCRGDLGIAHKQCAETWFKIKGNTICEICGSTAQNVASRQINGPSNLVL- 187
                +QLGC C+GDLG+AH +CAETWFKIKGN  CEICG+ A NVA  Q N  S     
Sbjct: 125 YYGLPLQLGCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAGEQSNPESTASTH 184

[Close]

BLAST of Sed0012103 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-18
Identity = 67/190 (35.26%), Postives = 95/190 (50.00%), Query Frame = 0


Query: 30  HSAADSSSDMS--EPDDSDGQSWHSAVDSTAWGS-DGEGQFSGEIEGVPA-AEVDLEANV 89
           H  +   SD+S    D  D  S +S   ST  GS + EG  S ++  V + +  +++ + 
Sbjct: 16  HRRSLDGSDVSVYYSDGEDVMSCYSYFYSTTGGSYEYEGDQSRKVSSVMSPSSSEIDDDD 75

Query: 90  HLGRVERNCRICHLELESGGGTDSDSSIQLGCCCRGDLGIAHKQCAETWFKIKGNTICEI 149
                E++CRICHL +E+ GG     +I+LGC C+ DL +AH+QCAETWFKIKG+  CEI
Sbjct: 76  ATAPPEKDCRICHLGVETSGG----GAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEI 135

Query: 150 CGSTAQNVA-----------SRQINGPSNLVLG----------------IVNFLLACMLF 186
           C S A+NV             R++        G                +VN +LACM+F
Sbjct: 136 CQSVARNVGGANEMVGSTMEERELRNGEETAAGEGGGATVVENRWQPQRVVNLVLACMVF 195

[Close]

BLAST of Sed0012103 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 2.2e-17
Identity = 68/184 (36.96%), Postives = 87/184 (47.28%), Query Frame = 0


Query: 37  SDMSEPDDSD---GQSWHSAVDSTAWGSDGEGQFSGEIEGVPAAEVDLEANVHLGRVERN 96
           SD+S  D S       +HSAV S      GE + + +++     E     ++  G  E++
Sbjct: 23  SDVSGEDSSSCDYDYDFHSAVRSFC----GEFEIADDLDDETDTESVASGSIR-GSPEKD 82

Query: 97  CRICHLELESGGGTDSDSSIQLGCCCRGDLGIAHKQCAETWFKIKGNTICEICGSTAQNV 156
           CRICHL LES      D  + LGC C+ DLG  HKQCA+TWFKIKGN  CEIC S AQN 
Sbjct: 83  CRICHLGLESSRHECGDPMV-LGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQNF 142

Query: 157 --ASRQI---------------NGPSNLVLG------------IVNFLLACMLFAF---G 186
                +I               N P+ +                +NFLL CM+ AF    
Sbjct: 143 FKVDNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLTCMVCAFVISW 200

[Close]

BLAST of Sed0012103 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-15
Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 91  ERNCRICHL---ELESGGGTDSDSS---IQLGCCCRGDLGIAHKQCAETWFKIKGNTICE 150
           ER CRICH    +     G D   S   I++GC C+ +LG+AH  CAE WFK++GN++CE
Sbjct: 99  ERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAEAWFKLRGNSVCE 158

Query: 151 ICGSTAQNVASR 157
           ICG TA+NV  R
Sbjct: 159 ICGCTAKNVTVR 170

The following BLAST results are available for this feature:

BLAST of Sed0012103 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895035.1	4.9e-59	63.33	uncharacterized protein LOC120083374 [Benincasa hispida] >XP_038895036.1 unchara...	[more]
XP_011658411.1	6.4e-59	63.81	uncharacterized protein LOC101212160 isoform X2 [Cucumis sativus]	[more]
XP_004145266.2	6.4e-59	63.81	uncharacterized protein LOC101212160 isoform X1 [Cucumis sativus] >KGN65776.1 hy...	[more]
XP_008457415.1	5.4e-58	63.33	PREDICTED: uncharacterized protein LOC103497107 isoform X2 [Cucumis melo]	[more]
XP_008457414.1	5.4e-58	63.33	PREDICTED: uncharacterized protein LOC103497107 isoform X1 [Cucumis melo] >KAA00...	[more]

BLAST of Sed0012103 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0012103 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0P0	3.1e-59	63.81	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G52792...	[more]
A0A5D3BFF6	2.6e-58	63.33	E3 ubiquitin-protein ligase MARCH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C517	2.6e-58	63.33	uncharacterized protein LOC103497107 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C6R6	2.6e-58	63.33	uncharacterized protein LOC103497107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1I103	4.6e-55	60.09	uncharacterized protein LOC111469521 OS=Cucurbita maxima OX=3661 GN=LOC111469521...	[more]

BLAST of Sed0012103 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	1.4e-24	44.22	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	2.4e-19	33.93	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	1.5e-18	35.26	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	2.2e-17	36.96	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G34200.1	1.6e-15	50.00	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 80..134 e-value: 9.3E-16 score: 68.4
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 81..133 e-value: 1.4E-9 score: 38.0
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 73..140 score: 19.230991
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 70..145 e-value: 1.2E-15 score: 58.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 18..142
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 18..142
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 81..134 e-value: 8.81151E-12 score: 55.4112
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 78..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012103.1	Sed0012103.1	mRNA
Sed0012103.3	Sed0012103.3	mRNA
Sed0012103.2	Sed0012103.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0008270	zinc ion binding