Sed0012081 (gene) Chayote v1

Overview


Name	Sed0012081
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein 230
Location	LG12: 32152707 .. 32153446 (-)
RNA-Seq Expression	Sed0012081
Synteny	Sed0012081

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAGTTTTTGCCCATTTTTTTTAACCCCACCTCCGATCAGAGAGCTTCTCTTTGCTTCGAAAATCAAAATTCCACCGTCGCCACCGCCACCGCCGCCACCGCCACCATCACCTCCACCGCCGCCGCCGCCGCCGCATTCTTCTGCAGATCGAAGCTTCAACATCCTCTTCTTCTTCCTACAACCCTAGAAAGATGGCGTACGTGGACCATTCGTTTTCGATTACAGACGAGGACATTATGATGGTTTCTCCGTTCGCCGTCAGCAATCGCCCTCCGATCAAGGAAATCGCTCTTTCAATTTCTCTTCTCGTGTTCGGCGTGTTTGGAATCATCATCGGGATCTTCATGACCAGCAATCAAGTCGGCGGCGATCGCGTTCACGGTAATCTTCGTTTTCGTTGTAATCTTTGCCCTAATTTGGGATGTGAATCGTTTATGCATTGTTATTGATGATTTGCAGGGATGTTTTTCTCGTTGTTGGGAGCTCTGTTGTTTATTCCTGGTTTCTATTACACGAGGATTGCTTATTATGCTTACAAGGGTTACAAGGGATTCTCCTTCTCCAACATACCCGCTGTCTAAATGCTGCAAGTTCCTTCCATTTTCCTACACTTGTACATATTTTCTTCTCTGTTTACATCGTTGCCCTGTTTTTTTCTCTATTGATTACTAATAACTATGCATTCGTTTATTGTCGATGAAGCCTGAATGATTGATTCTATGTGAATTTTTGTTGTGC

mRNA sequence

TGAAGTTTTTGCCCATTTTTTTTAACCCCACCTCCGATCAGAGAGCTTCTCTTTGCTTCGAAAATCAAAATTCCACCGTCGCCACCGCCACCGCCGCCACCGCCACCATCACCTCCACCGCCGCCGCCGCCGCCGCATTCTTCTGCAGATCGAAGCTTCAACATCCTCTTCTTCTTCCTACAACCCTAGAAAGATGGCGTACGTGGACCATTCGTTTTCGATTACAGACGAGGACATTATGATGGTTTCTCCGTTCGCCGTCAGCAATCGCCCTCCGATCAAGGAAATCGCTCTTTCAATTTCTCTTCTCGTGTTCGGCGTGTTTGGAATCATCATCGGGATCTTCATGACCAGCAATCAAGTCGGCGGCGATCGCGTTCACGGGATGTTTTTCTCGTTGTTGGGAGCTCTGTTGTTTATTCCTGGTTTCTATTACACGAGGATTGCTTATTATGCTTACAAGGGTTACAAGGGATTCTCCTTCTCCAACATACCCGCTGTCTAAATGCTGCAAGTTCCTTCCATTTTCCTACACTTGTACATATTTTCTTCTCTGTTTACATCGTTGCCCTGTTTTTTTCTCTATTGATTACTAATAACTATGCATTCGTTTATTGTCGATGAAGCCTGAATGATTGATTCTATGTGAATTTTTGTTGTGC

Coding sequence (CDS)

ATGGCGTACGTGGACCATTCGTTTTCGATTACAGACGAGGACATTATGATGGTTTCTCCGTTCGCCGTCAGCAATCGCCCTCCGATCAAGGAAATCGCTCTTTCAATTTCTCTTCTCGTGTTCGGCGTGTTTGGAATCATCATCGGGATCTTCATGACCAGCAATCAAGTCGGCGGCGATCGCGTTCACGGGATGTTTTTCTCGTTGTTGGGAGCTCTGTTGTTTATTCCTGGTTTCTATTACACGAGGATTGCTTATTATGCTTACAAGGGTTACAAGGGATTCTCCTTCTCCAACATACCCGCTGTCTAA

Protein sequence

MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGDRVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV

Homology

[Close]

BLAST of Sed0012081 vs. NCBI nr
Match: XP_004146339.1 (transmembrane protein 230 [Cucumis sativus] >KGN65495.1 hypothetical protein Csa_019721 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 5.1e-42
Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGD 60
           MAYVDH+FSITDEDIMM SPF V+NRPPIKEIAL++SLLVFG+ GII+G FM SN+VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV 104
           RVHG+FFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RVHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Sed0012081 vs. NCBI nr
Match: XP_022931504.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022972056.1 transmembrane protein 230-like [Cucurbita maxima] >XP_023529399.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >KAG6587719.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.0 bits (458), Expect = 5.1e-42
Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGD 60
           MAYVDH+FSITDEDIMM SPF V+NRPPIKEIAL++SLL FG+ GII+GIFM SN+VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 61  RVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV 104
           R HG+FFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Sed0012081 vs. NCBI nr
Match: XP_038879685.1 (transmembrane protein 230 [Benincasa hispida])

HSP 1 Score: 180.6 bits (457), Expect = 6.7e-42
Identity = 87/103 (84.47%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGD 60
           MAYVDH+FSITDEDIMM SPF V+NRPPIKEIAL++SLLVFG+ GI++G FM SN+VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV 104
           R HG+FFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Sed0012081 vs. NCBI nr
Match: KAG7021684.1 (Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 180.6 bits (457), Expect = 6.7e-42
Identity = 87/103 (84.47%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGD 60
           MAYVDH+FSITDEDIMM SPF V+NRPPIKEIAL++SLL FG+ GI++GIFM SN+VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGD 60

Query: 61  RVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV 104
           R HG+FFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Sed0012081 vs. NCBI nr
Match: XP_008453547.1 (PREDICTED: transmembrane protein 230-like [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-41
Identity = 87/103 (84.47%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGD 60
           MAYVDH+FSITDEDIMM SPF V+NRPPIKEIAL++SLLVFG+ GII+G FM SN+VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV 104
           R HG+FFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Sed0012081 vs. ExPASy Swiss-Prot
Match: Q5R8X3 (Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.1e-10
Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 28  PIKEIALSISLLVFGVFGIIIGIFMTSNQV---GGDRVHGMFFSLLGALLFIPGFYYTRI 87
           P K IAL+  L + G F IIIG  + S  +   G DR   +   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATGLFLIGAFLIIIGSLLLSGYISKGGADRAIPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of Sed0012081 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.0e-10
Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 28  PIKEIALSISLLVFGVFGIIIGIFMTSNQV---GGDRVHGMFFSLLGALLFIPGFYYTRI 87
           P K IAL++ L + G F IIIG  + +  +   G DR   +   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALAVVLFMIGTFLIIIGALLLAGYISKGGTDRAIPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of Sed0012081 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.0e-10
Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 28  PIKEIALSISLLVFGVFGIIIGIFMTSNQV---GGDRVHGMFFSLLGALLFIPGFYYTRI 87
           P K IAL+  L + G F IIIG  + S  +   G DR   +   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGAFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of Sed0012081 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.0e-10
Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 28  PIKEIALSISLLVFGVFGIIIGIFMTSNQV---GGDRVHGMFFSLLGALLFIPGFYYTRI 87
           P K IAL+  L + G F IIIG  + S  +   G DR   +   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of Sed0012081 vs. ExPASy Swiss-Prot
Match: Q5BJP5 (Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.0e-10
Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 28  PIKEIALSISLLVFGVFGIIIGIFMTSNQV---GGDRVHGMFFSLLGALLFIPGFYYTRI 87
           P K IAL+  L + G F IIIG  + S  +   G DR   +   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of Sed0012081 vs. ExPASy TrEMBL
Match: A0A6J1I4W8 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111470698 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.5e-42
Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGD 60
           MAYVDH+FSITDEDIMM SPF V+NRPPIKEIAL++SLL FG+ GII+GIFM SN+VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 61  RVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV 104
           R HG+FFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Sed0012081 vs. ExPASy TrEMBL
Match: A0A0A0LUC1 (Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_1G426960 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.5e-42
Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGD 60
           MAYVDH+FSITDEDIMM SPF V+NRPPIKEIAL++SLLVFG+ GII+G FM SN+VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV 104
           RVHG+FFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RVHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Sed0012081 vs. ExPASy TrEMBL
Match: A0A6J1EUE9 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111437657 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.5e-42
Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGD 60
           MAYVDH+FSITDEDIMM SPF V+NRPPIKEIAL++SLL FG+ GII+GIFM SN+VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 61  RVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV 104
           R HG+FFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Sed0012081 vs. ExPASy TrEMBL
Match: A0A1S3BWL2 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103494229 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.2e-42
Identity = 87/103 (84.47%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGD 60
           MAYVDH+FSITDEDIMM SPF V+NRPPIKEIAL++SLLVFG+ GII+G FM SN+VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV 104
           R HG+FFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Sed0012081 vs. ExPASy TrEMBL
Match: A0A6J1JDX9 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111484930 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.7e-41
Identity = 85/103 (82.52%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGD 60
           MAYVDH+FSI DEDI+M SPF V+NRPPIKEIAL++SLLVFG+ GI++G FM SN+VGGD
Sbjct: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV 104
           R HG+FFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Sed0012081 vs. TAIR 10
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 162.2 bits (409), Expect = 2.3e-40
Identity = 77/103 (74.76%), Postives = 90/103 (87.38%), Query Frame = 0


Query: 1   MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGD 60
           MAYVDH+FSITDEDIM+ + + V+NRPP+KEIAL+++LLVFG  GI+ G FM  N+VGGD
Sbjct: 1   MAYVDHAFSITDEDIMIETSYTVNNRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGD 60

Query: 61  RVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV 104
           R HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Sed0012081 vs. TAIR 10
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 161.4 bits (407), Expect = 3.9e-40
Identity = 75/103 (72.82%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 1   MAYVDHSFSITDEDIMMVSPFAVSNRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGD 60
           MAYVDH+FSI+DED+M+ + + VSNRPP+KEI+L++ LLVFG  GI++G FM  N+VGGD
Sbjct: 1   MAYVDHAFSISDEDLMIGTSYTVSNRPPVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGD 60

Query: 61  RVHGMFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPAV 104
           R HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNIP+V
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPSV 103

[Close]

BLAST of Sed0012081 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 63.9 bits (154), Expect = 8.5e-11
Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 25  NRPPIKEIALSISLLVFGVFGIIIGIFMTSNQVGGDRVHGMFFSLLGALLFIPGFYYTRI 84
           +R P K IAL++ LL  G   +++  F+    + GD   G    +LG L F+PGFY TRI
Sbjct: 43  DRVPWKSIALAVFLLFLGCLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPGFYETRI 102

Query: 85  AYYAYKGYKGFSFSNIPA 103
           AYY+++G +G+ F+ IP+
Sbjct: 103 AYYSWRGAEGYRFAAIPS 120

The following BLAST results are available for this feature:

BLAST of Sed0012081 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146339.1	5.1e-42	85.44	transmembrane protein 230 [Cucumis sativus] >KGN65495.1 hypothetical protein Csa...	[more]
XP_022931504.1	5.1e-42	85.44	transmembrane protein 230-like [Cucurbita moschata] >XP_022972056.1 transmembran...	[more]
XP_038879685.1	6.7e-42	84.47	transmembrane protein 230 [Benincasa hispida]	[more]
KAG7021684.1	6.7e-42	84.47	Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008453547.1	1.5e-41	84.47	PREDICTED: transmembrane protein 230-like [Cucumis melo]	[more]

BLAST of Sed0012081 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5R8X3	4.1e-10	46.75	Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1	[more]
Q5ZLH4	7.0e-10	45.45	Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1	[more]
Q96A57	7.0e-10	46.75	Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1	[more]
Q8CIB6	7.0e-10	46.75	Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1	[more]
Q5BJP5	7.0e-10	46.75	Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1	[more]

BLAST of Sed0012081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4W8	2.5e-42	85.44	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111470698 PE=3 SV=1	[more]
A0A0A0LUC1	2.5e-42	85.44	Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_1G426960 PE=3 SV=1	[more]
A0A6J1EUE9	2.5e-42	85.44	Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111437657 PE=3 SV=...	[more]
A0A1S3BWL2	7.2e-42	84.47	Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103494229 PE=3 SV=1	[more]
A0A6J1JDX9	4.7e-41	82.52	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111484930 PE=3 SV=1	[more]

BLAST of Sed0012081 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29850.1	2.3e-40	74.76	Eukaryotic protein of unknown function (DUF872)	[more]
AT2G19350.1	3.9e-40	72.82	Eukaryotic protein of unknown function (DUF872)	[more]
AT3G29170.1	8.5e-11	41.03	Eukaryotic protein of unknown function (DUF872)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008590	Transmembrane protein 230/134	PFAM	PF05915	DUF872	coord: 29..102 e-value: 8.1E-17 score: 61.4
IPR044234	Transmembrane protein 230	PANTHER	PTHR15664	C20ORF30 PROTEIN	coord: 1..103
None	No IPR available	PANTHER	PTHR15664:SF18	TRANSMEMBRANE PROTEIN 230-LIKE	coord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012081.1	Sed0012081.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005776	autophagosome
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane