Sed0012053 (gene) Chayote v1

Overview


Name	Sed0012053
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein FAR1-RELATED SEQUENCE
Location	LG13: 25042678 .. 25044699 (+)
RNA-Seq Expression	Sed0012053
Synteny	Sed0012053

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAGTTTGCCTTAATAGTGAGCCTATTTTTGATGAATGTGACGAGTATGAGGTAGATGGTAATGGTTCTTTTGTGGACAACGAAAACGAATCTGTGGACGCACAGTCAAAGAAAAATCCTCCACTGCCAACTGTGGGTTTGGAGTTTGATTCTTTTGATGAGGCATATGACTATTATAACGTTTATGCTAAGGAACTGGGCTTTGGCATCAGAGTCAGTAATTCATGGTTCAGATCTAAGAGAAAAGAGCGATATAGAGCTAAGCTTAGCTGCAGCAGTGCAGGTTTCAAAAAAAGGAGTGAAGCCAACAATCCAAGACCGGAAACTAGAACTGGTTGTCCTGCAATGATAATTATTAAGCTGGTTGACACGAAAAGGTGGAGAATAGTTGAAGTTGAGCTTGAACACAACCATCCAGTGAGTCCACAAATCACTCGATTTTACAAGTCACATAAAAAGATGATTCTTGCTGCAAAGAAAGCACAGCCACAGCTGCACCCTGTAACTGAAATTCAAACCATCAAGCTGTATAGAAAAAATATTCTTAATGGTTGTAATGGGTGCTCTAATGTTGACCAAAGAGAGGGTATCGGCGCTGTTGATCACTCGAAACATTTGGAACTTAAAGATGGGGATGGACATGCACTGTATAATTATTTCTGCCGCATGAAATTGAAAAATCCCAAATTTTTTTACTTGATGGATCTTGACAATGGTGGGCATTTGAGGAATGTGTTTTGGGCGGATGCTCGGTCCAGGACTGCATATTGTTACTTCAGCGATACCATCACAATAGACACAACGTGCTTAACAAACAGATATGAGATTCCTCTGATTTCATTTGTAGGTATGAATCACCATGGCCAATCAGTGTTGTTAGGATGTGGCTTTGTTGGATTTGAATCTGTGGAGTGTTTTGTTTGGATTTTGAAGGCATGGCTTCGGTGCATGCTGGGACGCTCTCCACATGTCATCATTACCGACCGAAATAAAGCATTGCTAGCTGCTGTCTCTGAAGTTTTCCCTAAAGCTTGTCACTGTTATTCTATTTGGTATATCATGCAAAGATTACCAGAAAAGCTGGGTGGATTGAGAGGATATGAAATGATAAGAAGCCAATTGAACCAAACCATTTTTAGCTCATTGAAGATAGCTGAATTTGAAACTTCATGGACTAATCTGATCAAGCACAACGGTCTTGGAGATAATAAATGGCTCCAATCACTGTATGAAGATCGGGCACTATGGGCTCCCGTATACTTAAAAGACACATTTTTTGCAGGAATGGTCCCTATCCAAGCAAATGAGAGCTTCAAAACGTTTTTTGATGGATATGTACATAAACACACATCTTTTAAGGAATTTGTTGACAAGTACGATCTTGCCCTCCATAGGAGATACCATAAAGAATCAGTAGCAGATTCGGAGTCAAGAAATTTAAGCCTTGAGTTGAAAACAAGATGTGATTTTGAATTGCAGCTTTCCAAGTTGTACACAAAAGAAATATTTAGCAAGTTCCAATCAGAGGTAGAAGGAATGTACTCTTGCTTCAACACAAAGCAGGTCAATGTAAATGGCCCTATAGTAACTTACATTGTCAAAGAAAGGATTGAAGTCAACGGAAGGGAGAAAGAGGTAAGATATTTTGAGGTCTTGTACGAGACAAGTGAAGCGGGCATTCGGTGCATTTGCAGTTTATTCAACTACAAAGGCTACCTTTGCAGGCATGCGTTAAATGTTCTTAATTATAACGGCGTCGAAGAAATCCCAGCTCGCTACATTCTGCCACGCTGGTGTAAAGATTTCAAACGCAGGTATCTTCTAGATCAAAGCTTAAGTAATACAAATGTGTATAGTTCAACATACCAATATAGTCACATTCTTAATTGTGCACTTCCAGTTGTAGAGGAAGGTGCACAATCTGAAGAACGTTATAAGTTTGCATTGCAAGAATTGGAGAAGTTGTTGAATAAATTAAATCTTGTAGAGGATAATAATCTAAATAACAATGGATAG

mRNA sequence

ATGGAGGAAGTTTGCCTTAATAGTGAGCCTATTTTTGATGAATGTGACGAGTATGAGGTAGATGGTAATGGTTCTTTTGTGGACAACGAAAACGAATCTGTGGACGCACAGTCAAAGAAAAATCCTCCACTGCCAACTGTGGGTTTGGAGTTTGATTCTTTTGATGAGGCATATGACTATTATAACGTTTATGCTAAGGAACTGGGCTTTGGCATCAGAGTCAGTAATTCATGGTTCAGATCTAAGAGAAAAGAGCGATATAGAGCTAAGCTTAGCTGCAGCAGTGCAGGTTTCAAAAAAAGGAGTGAAGCCAACAATCCAAGACCGGAAACTAGAACTGGTTGTCCTGCAATGATAATTATTAAGCTGGTTGACACGAAAAGGTGGAGAATAGTTGAAGTTGAGCTTGAACACAACCATCCAGTGAGTCCACAAATCACTCGATTTTACAAGTCACATAAAAAGATGATTCTTGCTGCAAAGAAAGCACAGCCACAGCTGCACCCTCTTTCCAAGTTGTACACAAAAGAAATATTTAGCAAGTTCCAATCAGAGGTAGAAGGAATGTACTCTTGCTTCAACACAAAGCAGGTCAATGTAAATGGCCCTATAGTAACTTACATTGTCAAAGAAAGGATTGAAGTCAACGGAAGGGAGAAAGAGGTAAGATATTTTGAGGTCTTGTACGAGACAAGTGAAGCGGGCATTCGGTGCATTTGCAGTTTATTCAACTACAAAGGCTACCTTTGCAGGCATGCGTTAAATGTTCTTAATTATAACGGCGTCGAAGAAATCCCAGCTCGCTACATTCTGCCACGCTGGTGTAAAGATTTCAAACGCAGGTATCTTCTAGATCAAAGCTTAAGTAATACAAATGTGTATAGTTCAACATACCAATATAGTCACATTCTTAATTGTGCACTTCCAGTTGTAGAGGAAGGTGCACAATCTGAAGAACGTTATAAGTTTGCATTGCAAGAATTGGAGAAGTTGTTGAATAAATTAAATCTTGTAGAGGATAATAATCTAAATAACAATGGATAG

Coding sequence (CDS)

ATGGAGGAAGTTTGCCTTAATAGTGAGCCTATTTTTGATGAATGTGACGAGTATGAGGTAGATGGTAATGGTTCTTTTGTGGACAACGAAAACGAATCTGTGGACGCACAGTCAAAGAAAAATCCTCCACTGCCAACTGTGGGTTTGGAGTTTGATTCTTTTGATGAGGCATATGACTATTATAACGTTTATGCTAAGGAACTGGGCTTTGGCATCAGAGTCAGTAATTCATGGTTCAGATCTAAGAGAAAAGAGCGATATAGAGCTAAGCTTAGCTGCAGCAGTGCAGGTTTCAAAAAAAGGAGTGAAGCCAACAATCCAAGACCGGAAACTAGAACTGGTTGTCCTGCAATGATAATTATTAAGCTGGTTGACACGAAAAGGTGGAGAATAGTTGAAGTTGAGCTTGAACACAACCATCCAGTGAGTCCACAAATCACTCGATTTTACAAGTCACATAAAAAGATGATTCTTGCTGCAAAGAAAGCACAGCCACAGCTGCACCCTCTTTCCAAGTTGTACACAAAAGAAATATTTAGCAAGTTCCAATCAGAGGTAGAAGGAATGTACTCTTGCTTCAACACAAAGCAGGTCAATGTAAATGGCCCTATAGTAACTTACATTGTCAAAGAAAGGATTGAAGTCAACGGAAGGGAGAAAGAGGTAAGATATTTTGAGGTCTTGTACGAGACAAGTGAAGCGGGCATTCGGTGCATTTGCAGTTTATTCAACTACAAAGGCTACCTTTGCAGGCATGCGTTAAATGTTCTTAATTATAACGGCGTCGAAGAAATCCCAGCTCGCTACATTCTGCCACGCTGGTGTAAAGATTTCAAACGCAGGTATCTTCTAGATCAAAGCTTAAGTAATACAAATGTGTATAGTTCAACATACCAATATAGTCACATTCTTAATTGTGCACTTCCAGTTGTAGAGGAAGGTGCACAATCTGAAGAACGTTATAAGTTTGCATTGCAAGAATTGGAGAAGTTGTTGAATAAATTAAATCTTGTAGAGGATAATAATCTAAATAACAATGGATAG

Protein sequence

MEEVCLNSEPIFDECDEYEVDGNGSFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAYDYYNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMIIIKLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKKAQPQLHPLSKLYTKEIFSKFQSEVEGMYSCFNTKQVNVNGPIVTYIVKERIEVNGREKEVRYFEVLYETSEAGIRCICSLFNYKGYLCRHALNVLNYNGVEEIPARYILPRWCKDFKRRYLLDQSLSNTNVYSSTYQYSHILNCALPVVEEGAQSEERYKFALQELEKLLNKLNLVEDNNLNNNG

Homology

[Close]

BLAST of Sed0012053 vs. NCBI nr
Match: XP_023524103.1 (protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023524104.1 protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 524.6 bits (1350), Expect = 6.4e-145
Identity = 320/673 (47.55%), Postives = 337/673 (50.07%), Query Frame = 0


Query: 1   MEEVCLNSEPIFDECDEYEVDGNGSFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAYDY 60
           MEEVCLNSEPIFDECDEYEVDG+G+FVDN NES +AQSKKNPPLPTVGLEFDSFDEAYD+
Sbjct: 1   MEEVCLNSEPIFDECDEYEVDGDGAFVDNGNESGEAQSKKNPPLPTVGLEFDSFDEAYDF 60

Query: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMII 120
           YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKK+SEANNPRPETRTGCPAMII
Sbjct: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMII 120

Query: 121 IKLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKKAQPQLHP----------- 180
           I+LVDTKRWRIVEVELEHNHPV+PQITRFYKSHKKMILAAKKAQPQLHP           
Sbjct: 121 IRLVDTKRWRIVEVELEHNHPVNPQITRFYKSHKKMILAAKKAQPQLHPVTEVHTIKLYR 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 STTLNGCSGCSNVDQREGISSVDHLKHLELKDGDGHALYNYFCRMKLTNPNFFYLMDLDN 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 DGHLRNVFWADARSRTTYSYFCDTITIDTTCLTNRYEIPLISFVGVNHHGQSVLLGCGFV 300

Query: 301 ------------------------------------------------------------ 348
                                                                       
Sbjct: 301 GFESVECFVWILKAWLQCMLGCSPQVIITDQNKTLVAAVSEVFPKACHCYSTWYIMQRVP 360

[Close]

BLAST of Sed0012053 vs. NCBI nr
Match: KAG6608163.1 (Protein FAR1-RELATED SEQUENCE 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031803.1 Protein FAR1-RELATED SEQUENCE 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 524.6 bits (1350), Expect = 6.4e-145
Identity = 320/673 (47.55%), Postives = 337/673 (50.07%), Query Frame = 0


Query: 1   MEEVCLNSEPIFDECDEYEVDGNGSFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAYDY 60
           MEEVCLNSEPIFDECDEYEVDG+G+FVDN NES +AQSKKNPPLPTVGLEFDSFDEAYD+
Sbjct: 1   MEEVCLNSEPIFDECDEYEVDGDGAFVDNGNESGEAQSKKNPPLPTVGLEFDSFDEAYDF 60

Query: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMII 120
           YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKK+SEANNPRPETRTGCPAMII
Sbjct: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMII 120

Query: 121 IKLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKKAQPQLHP----------- 180
           I+LVDTKRWRIVEVELEHNHPV+PQITRFYKSHKKMILAAKKAQPQLHP           
Sbjct: 121 IRLVDTKRWRIVEVELEHNHPVNPQITRFYKSHKKMILAAKKAQPQLHPVTEVHTIKLYR 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 STTLNGCSGCSNVDQREGISSVDHLKHLELKDGDGHALYNYFCRMKLTNPNFFYLMDLDN 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 DGHLRNVFWADARSRTTYSYFCDTITIDTTCLTNRYEIPLISFVGVNHHGQSVLLGCGFV 300

Query: 301 ------------------------------------------------------------ 348
                                                                       
Sbjct: 301 GFESVECFVWILKAWLQCMLGYSPQVIITDQNKTLVAAVSEVFPKACHCYSTWYIMQRVP 360

[Close]

BLAST of Sed0012053 vs. NCBI nr
Match: XP_022941205.1 (protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita moschata] >XP_022941206.1 protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita moschata] >XP_022941207.1 protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 524.6 bits (1350), Expect = 6.4e-145
Identity = 320/673 (47.55%), Postives = 337/673 (50.07%), Query Frame = 0


Query: 1   MEEVCLNSEPIFDECDEYEVDGNGSFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAYDY 60
           MEEVCLNSEPIFDECDEYEVDG+G+FVDN NES +AQSKKNPPLPTVGLEFDSFDEAYD+
Sbjct: 1   MEEVCLNSEPIFDECDEYEVDGDGAFVDNGNESGEAQSKKNPPLPTVGLEFDSFDEAYDF 60

Query: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMII 120
           YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKK+SEANNPRPETRTGCPAMII
Sbjct: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMII 120

Query: 121 IKLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKKAQPQLHP----------- 180
           I+LVDTKRWRIVEVELEHNHPV+PQITRFYKSHKKMILAAKKAQPQLHP           
Sbjct: 121 IRLVDTKRWRIVEVELEHNHPVNPQITRFYKSHKKMILAAKKAQPQLHPVTEVHTIKLYR 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 STTLNGCSGCSNVDQREGISSVDHLKHLELKDGDGHALYNYFCRMKLTNPNFFYLMDLDN 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 DGHLRNVFWADARSRTTYSYFCDTITIDTTCLTNRYEIPLISFVGVNHHGQSVLLGCGFV 300

Query: 301 ------------------------------------------------------------ 348
                                                                       
Sbjct: 301 GFESVECFVWILKAWLQCMLGCSPQVIITDQNKTLVAAVSEVFPKACHCYSTWYIMQRVP 360

[Close]

BLAST of Sed0012053 vs. NCBI nr
Match: XP_022982131.1 (protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita maxima] >XP_022982132.1 protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita maxima] >XP_022982133.1 protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 523.5 bits (1347), Expect = 1.4e-144
Identity = 319/673 (47.40%), Postives = 337/673 (50.07%), Query Frame = 0


Query: 1   MEEVCLNSEPIFDECDEYEVDGNGSFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAYDY 60
           MEEVCLNSEPIFDECD+YEVDG+G+FVDN NES +AQSKKNPPLPTVGLEFDSFDEAYD+
Sbjct: 1   MEEVCLNSEPIFDECDDYEVDGDGAFVDNGNESGEAQSKKNPPLPTVGLEFDSFDEAYDF 60

Query: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMII 120
           YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKK+SEANNPRPETRTGCPAMII
Sbjct: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMII 120

Query: 121 IKLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKKAQPQLHP----------- 180
           I+LVDTKRWRIVEVELEHNHPV+PQITRFYKSHKKMILAAKKAQPQLHP           
Sbjct: 121 IRLVDTKRWRIVEVELEHNHPVNPQITRFYKSHKKMILAAKKAQPQLHPVTEVHTIKLYR 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 STTLNGCSGCSNVDQREGISSVDHLKHLELKDGDGHALYNYFCRMKLTNPNFFYLMDLDN 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 DGHLRNVFWADARSRTTYSYFCDTITIDTTCLTNRYEIPLISFVGVNHHGQSVLLGCGFV 300

Query: 301 ------------------------------------------------------------ 348
                                                                       
Sbjct: 301 GFESVECFVWILKAWLQCMLGCSPQVIITDQNKTLVAAVTEVFPKACHCYSTWYIMQRVP 360

[Close]

BLAST of Sed0012053 vs. NCBI nr
Match: KHG04174.1 (far1-related sequence 6 -like protein [Gossypium arboreum])

HSP 1 Score: 520.4 bits (1339), Expect = 1.2e-143
Identity = 254/367 (69.21%), Postives = 301/367 (82.02%), Query Frame = 0


Query: 1   MEEVCLNSEPIFDECDEYEVDGNGSFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAYDY 60
           MEEVCLNSEP+FD  DEYEV+G+ S V++++E+    SKK PPLPT+GLEFDSFDEAYDY
Sbjct: 27  MEEVCLNSEPVFDMVDEYEVEGDCSAVEHDDETGSKHSKKEPPLPTIGLEFDSFDEAYDY 86

Query: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMII 120
           YN+YAKE GFGIRVSNSWFR+K+KERYRAKLSCSSAGFKK+SEANNPRPETRTGCPAM++
Sbjct: 87  YNIYAKEQGFGIRVSNSWFRTKKKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMVV 146

Query: 121 IKLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKKAQPQLHPLSKL------- 180
           I+LVD+KRWRIVEVELEHNH VSPQI RFYKSHKKMILAA+KA+P   P++++       
Sbjct: 147 IRLVDSKRWRIVEVELEHNHQVSPQIKRFYKSHKKMILAARKARPPAEPVTEIHTIKLYR 206

Query: 181 -------------------YTKEIFSKFQSEVEGMYSCFNTKQVNVNGPIVTYIVKERIE 240
                              YTKEIF KFQSEVEGMYSCFNT+QV  NGPIVTYIVKER+E
Sbjct: 207 TAAMDAVSNGFSNVSEREAYTKEIFDKFQSEVEGMYSCFNTRQVTANGPIVTYIVKERVE 266

Query: 241 VNGREKEVRYFEVLYETSEAGIRCICSLFNYKGYLCRHALNVLNYNGVEEIPARYILPRW 300
           + G EKEVR +EVL+ET++  IRCICSLFNYKGYLCRHALNVLNYNGVEE+P+RYIL RW
Sbjct: 267 IEGNEKEVRSYEVLFETNQVDIRCICSLFNYKGYLCRHALNVLNYNGVEEVPSRYILRRW 326

Query: 301 CKDFKRRYLLDQSLSNTNVYSSTYQYSHILNCALPVVEEGAQSEERYKFALQELEKLLNK 342
           CKDFK ++ +D+  ++ +VYS   + SH  N A+P+VE GAQSEE+YK AL EL++LLNK
Sbjct: 327 CKDFKFQH-VDRGSTDIDVYSPVDRQSHFHNYAVPIVEGGAQSEEQYKIALHELQELLNK 386

[Close]

BLAST of Sed0012053 vs. ExPASy Swiss-Prot
Match: Q9SSQ4 (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=FRS6 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.6e-48
Identity = 170/642 (26.48%), Postives = 228/642 (35.51%), Query Frame = 0


Query: 19  EVDGNGSFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAYDYYNVYAKELGFGIRVSNSW 78
           E +  G F +     VD   +K    P VG+EF+S+D+AY+YYN YA E+GF +RV NSW
Sbjct: 61  EEETMGGFDEQSGLLVD--ERKEFDAPAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSW 120

Query: 79  FRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMIIIKLVDTKRWRIVEVELEH 138
           F+ + KE+Y A L CSS GFK+ ++ N  R ETRTGCPAMI ++ VD+KRWR+VEV L+H
Sbjct: 121 FKRRSKEKYGAVLCCSSQGFKRINDVNRVRKETRTGCPAMIRMRQVDSKRWRVVEVTLDH 180

Query: 139 NH-------------------PVSP----------------------------------- 198
           NH                   PVS                                    
Sbjct: 181 NHLLGCKLYKSVKRKRKCVSSPVSDAKTIKLYRACVVDNGSNVNPNSTLNKKFQNSTGSP 240

Query: 199 --------------------QITR------------------------------------ 258
                               Q+T                                     
Sbjct: 241 DLLNLKRGDSAAIYNYFCRMQLTNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFGDVI 300

Query: 259 ------------------------------------------------------------ 318
                                                                       
Sbjct: 301 FIDSSYISGKFEIPLVTFTGVNHHGKTTLLSCGFLAGETMESYHWLLKVWLSVMKRSPQT 360

Query: 319 ----------------FYKSHKKMIL------------------AAKKAQPQ-------- 341
                           F +SH++  L                  A +KA  +        
Sbjct: 361 IVTDRCKPLEAAISQVFPRSHQRFSLTHIMRKIPEKLGGLHNYDAVRKAFTKAVYETLKV 420

[Close]

BLAST of Sed0012053 vs. ExPASy Swiss-Prot
Match: Q9S793 (Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana OX=3702 GN=FRS8 PE=2 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 5.8e-32
Identity = 74/189 (39.15%), Postives = 111/189 (58.73%), Query Frame = 0


Query: 155 KMILAAKKAQPQLHPLSKLYTKEIFSKFQSEVEGMYSCFNTKQVNVNGPIVTYIVKERIE 214
           K+I   K   P    ++K++T EIF +FQ EV  M SCF   QV+ NG   +Y+VKER  
Sbjct: 539 KLIPKLKTTHPYESQMAKVFTMEIFRRFQDEVSAMSSCFGVTQVHSNGSASSYVVKER-- 598

Query: 215 VNGREKEVRYFEVLYETSEAG-IR--CICSLFNYKGYLCRHALNVLNYNGVEEIPARYIL 274
                 +VR FEV+YETS A  +R  C+C  F++ GY CRH L +L++NG++E+P +YIL
Sbjct: 599 ---EGDKVRDFEVIYETSAAAQVRCFCVCGGFSFNGYQCRHVLLLLSHNGLQEVPPQYIL 658

Query: 275 PRWCKDFKRRYLLDQSLSNTNVYSSTYQYSHILNCALPVVEEGAQSEERYKFALQELEKL 334
            RW KD KR Y+ +      ++ +    Y H+   A+ VVE+G +S+E  + A +   + 
Sbjct: 659 QRWRKDVKRLYVAEFGSGRVDIMNPDQWYEHLHRRAMQVVEQGMRSKEHCRAAWEAFREC 718

Query: 335 LNKLNLVED 341
            NK+  V +
Sbjct: 719 ANKVQFVTE 722

HSP 2 Score: 124.0 bits (310), Expect = 3.3e-27
Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 0


Query: 29  NENESVDAQSKKNPPLPTVGLEFDSFDEAYDYYNVYAKELGFGIRVSNSWFRSKRKERYR 88
           +EN   + +    PP PT G+EF+S+D+AY +YN YA+ELGF IRV +SW +   KE+  
Sbjct: 80  DENAFANEKCLMAPP-PTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRG 139

Query: 89  AKLSCSSAGFKKRSEANNPRPETRTGCPAMIIIKLVDTKRWRIVEVELEHNHPVSPQITR 148
           A L C+  GFK   +A++ R ETRTGC AMI ++L+   RW++ +V+L+HNH   PQ   
Sbjct: 140 AVLCCNCQGFKLLKDAHSRRKETRTGCQAMIRLRLIHFDRWKVDQVKLDHNHSFDPQRAH 199

Query: 149 FYKSHKKMILAAK---KAQPQLHPLSKLYTKEIF 180
             KSHKK   +A    K  P+  P  ++ T +++
Sbjct: 200 NSKSHKKSSSSASPATKTNPEPPPHVQVRTIKLY 232

[Close]

BLAST of Sed0012053 vs. ExPASy Swiss-Prot
Match: Q5UBY2 (Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=FRS1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.5e-19
Identity = 63/185 (34.05%), Postives = 99/185 (53.51%), Query Frame = 0


Query: 161 KKAQPQLHPLSKLYTKEIFSKFQSEVEGMYSCFNTKQVNVNGPIVTYIVKERIEVNGREK 220
           K   P    ++++YT+E+F KFQ EV G  +C   K+   +G     + K    V   E+
Sbjct: 382 KSPSPFGKQMAEVYTREMFKKFQVEVLGGVACHPKKESEEDG-----VNKRTFRVQDYEQ 441

Query: 221 EVRYFEVLYETSEAGIRCICSLFNYKGYLCRHALNVLNYNGVEEIPARYILPRWCKDFKR 280
             R F V++ +  + + C C LF  KG+LCRHA+ VL  +G   IP++Y+L RW KD K 
Sbjct: 442 N-RSFVVVWNSESSEVVCSCRLFELKGFLCRHAMIVLQMSGELSIPSQYVLKRWTKDAKS 501

Query: 281 RYLLDQSLSNTNVYSSTYQ-YSHILNCALPVVEEGAQSEERYKFALQELEKLL----NKL 340
           R +++     T+V S+  Q Y  +   +L + EE + SEE Y   +  L + L    NK 
Sbjct: 502 REVMES--DQTDVESTKAQRYKDLCLRSLKLSEEASLSEESYNAVVNVLNEALRKWENKS 558

[Close]

BLAST of Sed0012053 vs. ExPASy Swiss-Prot
Match: Q9LIE5 (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.3e-19
Identity = 61/171 (35.67%), Postives = 91/171 (53.22%), Query Frame = 0


Query: 159 AAKKAQPQLHPLSKLYTKEIFSKFQSEVEGMYSCFNTKQVNVNGPIVTYIVKERIEVNGR 218
           A K   P    +S++YT  +F KFQ EV G  +C + ++ N +    T+ V++  E N  
Sbjct: 506 AMKSPSPFEKSVSEVYTPAVFKKFQIEVLGAIAC-SPREENRDATCSTFRVQD-FENN-- 565

Query: 219 EKEVRYFEVLYETSEAGIRCICSLFNYKGYLCRHALNVLNYNGVEEIPARYILPRWCKDF 278
               + F V +  ++A + CIC LF YKGYLCRH LNVL    +  IP++YIL RW KD 
Sbjct: 566 ----QDFMVTWNQTKAEVSCICRLFEYKGYLCRHTLNVLQCCHLSSIPSQYILKRWTKDA 625

Query: 279 KRRYLLDQSLSNTNVYSSTYQYSHILNCALPVVEEGAQSEERYKFALQELE 330
           K R+    S     + +   +Y+ +   AL + EE + S+E Y  A   +E
Sbjct: 626 KSRHF---SGEPQQLQTRLLRYNDLCERALKLNEEASLSQESYNIAFLAIE 665

HSP 2 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 24/68 (35.29%), Postives = 36/68 (52.94%), Query Frame = 0


Query: 45  PTVGLEFDSFDEAYDYYNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEA 104
           P  G+EF+S  EAY +Y  Y++ +GF   + NS      +E   AK +CS  G K+  + 
Sbjct: 70  PLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDK 129

Query: 105 NNPRPETR 113
           +  RP  R
Sbjct: 130 SFNRPRAR 137

[Close]

BLAST of Sed0012053 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.3e-19
Identity = 68/201 (33.83%), Postives = 101/201 (50.25%), Query Frame = 0


Query: 146 ITRFYKSHKKMILAAKKAQPQLHPLSKLYTKEIFSKFQSEVEGMYSCFNTKQVNVNGPIV 205
           +  F   HK+   A K   P    ++  YT  IF KFQ EV G+ +C   K+   +  + 
Sbjct: 486 VADFDTCHKQP--ALKSPSPWEKQMATTYTHTIFKKFQVEVLGVVACHPRKE-KEDENMA 545

Query: 206 TYIVKERIEVNGREKEVRYFEVLYETSEAGIRCICSLFNYKGYLCRHALNVLNYNGVEEI 265
           T+ V++       EK+   F V +  +++ + C C +F YKG+LCRHAL +L   G   I
Sbjct: 546 TFRVQD------CEKD-DDFLVTWSKTKSELCCFCRMFEYKGFLCRHALMILQMCGFASI 605

Query: 266 PARYILPRWCKDFKRRYLLDQSLSNTNVYSSTYQYSHILNCALPVVEEGAQSEERYKFAL 325
           P +YIL RW KD K   L  +      + +   +Y+ + + A  + EEG  SEE Y  AL
Sbjct: 606 PPQYILKRWTKDAKSGVLAGEGAD--QIQTRVQRYNDLCSRATELSEEGCVSEENYNIAL 665

Query: 326 QELEKLLNKLNLVEDNNLNNN 347
           + L + L   N V+ NN  NN
Sbjct: 666 RTLVETLK--NCVDMNNARNN 672

HSP 2 Score: 70.5 bits (171), Expect = 4.3e-11
Identity = 47/164 (28.66%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 45  PTVGLEFDSFDEAYDYYNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEA 104
           P  G++FD+ + AY +Y  YAK +GF   + NS    K K+   AK +CS  G    SE+
Sbjct: 51  PRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESES 110

Query: 105 --NNPRPET--RTGCPAMIIIKLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAA 164
             ++ R  T  +T C A + +K     +W I E   +HNH + P +   ++  + + LA 
Sbjct: 111 SGSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELLPALAYHFRIQRNVKLAE 170

Query: 165 KKAQPQLHPLSKLYTKEIFSKFQSEVEGMYSCFNTKQVNVNGPI 205
           K     LH +S+  TK+++ +   +  G  +  +  Q +V+  +
Sbjct: 171 KNNIDILHAVSE-RTKKMYVEMSRQSGGYKNIGSLLQTDVSSQV 213

[Close]

BLAST of Sed0012053 vs. ExPASy TrEMBL
Match: A0A6J1FKH3 (Protein FAR1-RELATED SEQUENCE OS=Cucurbita moschata OX=3662 GN=LOC111446583 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 3.1e-145
Identity = 320/673 (47.55%), Postives = 337/673 (50.07%), Query Frame = 0


Query: 1   MEEVCLNSEPIFDECDEYEVDGNGSFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAYDY 60
           MEEVCLNSEPIFDECDEYEVDG+G+FVDN NES +AQSKKNPPLPTVGLEFDSFDEAYD+
Sbjct: 1   MEEVCLNSEPIFDECDEYEVDGDGAFVDNGNESGEAQSKKNPPLPTVGLEFDSFDEAYDF 60

Query: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMII 120
           YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKK+SEANNPRPETRTGCPAMII
Sbjct: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMII 120

Query: 121 IKLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKKAQPQLHP----------- 180
           I+LVDTKRWRIVEVELEHNHPV+PQITRFYKSHKKMILAAKKAQPQLHP           
Sbjct: 121 IRLVDTKRWRIVEVELEHNHPVNPQITRFYKSHKKMILAAKKAQPQLHPVTEVHTIKLYR 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 STTLNGCSGCSNVDQREGISSVDHLKHLELKDGDGHALYNYFCRMKLTNPNFFYLMDLDN 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 DGHLRNVFWADARSRTTYSYFCDTITIDTTCLTNRYEIPLISFVGVNHHGQSVLLGCGFV 300

Query: 301 ------------------------------------------------------------ 348
                                                                       
Sbjct: 301 GFESVECFVWILKAWLQCMLGCSPQVIITDQNKTLVAAVSEVFPKACHCYSTWYIMQRVP 360

[Close]

BLAST of Sed0012053 vs. ExPASy TrEMBL
Match: A0A6J1J427 (Protein FAR1-RELATED SEQUENCE OS=Cucurbita maxima OX=3661 GN=LOC111481060 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 6.9e-145
Identity = 319/673 (47.40%), Postives = 337/673 (50.07%), Query Frame = 0


Query: 1   MEEVCLNSEPIFDECDEYEVDGNGSFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAYDY 60
           MEEVCLNSEPIFDECD+YEVDG+G+FVDN NES +AQSKKNPPLPTVGLEFDSFDEAYD+
Sbjct: 1   MEEVCLNSEPIFDECDDYEVDGDGAFVDNGNESGEAQSKKNPPLPTVGLEFDSFDEAYDF 60

Query: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMII 120
           YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKK+SEANNPRPETRTGCPAMII
Sbjct: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMII 120

Query: 121 IKLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKKAQPQLHP----------- 180
           I+LVDTKRWRIVEVELEHNHPV+PQITRFYKSHKKMILAAKKAQPQLHP           
Sbjct: 121 IRLVDTKRWRIVEVELEHNHPVNPQITRFYKSHKKMILAAKKAQPQLHPVTEVHTIKLYR 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 STTLNGCSGCSNVDQREGISSVDHLKHLELKDGDGHALYNYFCRMKLTNPNFFYLMDLDN 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 DGHLRNVFWADARSRTTYSYFCDTITIDTTCLTNRYEIPLISFVGVNHHGQSVLLGCGFV 300

Query: 301 ------------------------------------------------------------ 348
                                                                       
Sbjct: 301 GFESVECFVWILKAWLQCMLGCSPQVIITDQNKTLVAAVTEVFPKACHCYSTWYIMQRVP 360

[Close]

BLAST of Sed0012053 vs. ExPASy TrEMBL
Match: A0A0B0MXF2 (Protein FAR1-RELATED SEQUENCE OS=Gossypium arboreum OX=29729 GN=F383_29583 PE=3 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 5.8e-144
Identity = 254/367 (69.21%), Postives = 301/367 (82.02%), Query Frame = 0


Query: 1   MEEVCLNSEPIFDECDEYEVDGNGSFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAYDY 60
           MEEVCLNSEP+FD  DEYEV+G+ S V++++E+    SKK PPLPT+GLEFDSFDEAYDY
Sbjct: 27  MEEVCLNSEPVFDMVDEYEVEGDCSAVEHDDETGSKHSKKEPPLPTIGLEFDSFDEAYDY 86

Query: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMII 120
           YN+YAKE GFGIRVSNSWFR+K+KERYRAKLSCSSAGFKK+SEANNPRPETRTGCPAM++
Sbjct: 87  YNIYAKEQGFGIRVSNSWFRTKKKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMVV 146

Query: 121 IKLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKKAQPQLHPLSKL------- 180
           I+LVD+KRWRIVEVELEHNH VSPQI RFYKSHKKMILAA+KA+P   P++++       
Sbjct: 147 IRLVDSKRWRIVEVELEHNHQVSPQIKRFYKSHKKMILAARKARPPAEPVTEIHTIKLYR 206

Query: 181 -------------------YTKEIFSKFQSEVEGMYSCFNTKQVNVNGPIVTYIVKERIE 240
                              YTKEIF KFQSEVEGMYSCFNT+QV  NGPIVTYIVKER+E
Sbjct: 207 TAAMDAVSNGFSNVSEREAYTKEIFDKFQSEVEGMYSCFNTRQVTANGPIVTYIVKERVE 266

Query: 241 VNGREKEVRYFEVLYETSEAGIRCICSLFNYKGYLCRHALNVLNYNGVEEIPARYILPRW 300
           + G EKEVR +EVL+ET++  IRCICSLFNYKGYLCRHALNVLNYNGVEE+P+RYIL RW
Sbjct: 267 IEGNEKEVRSYEVLFETNQVDIRCICSLFNYKGYLCRHALNVLNYNGVEEVPSRYILRRW 326

Query: 301 CKDFKRRYLLDQSLSNTNVYSSTYQYSHILNCALPVVEEGAQSEERYKFALQELEKLLNK 342
           CKDFK ++ +D+  ++ +VYS   + SH  N A+P+VE GAQSEE+YK AL EL++LLNK
Sbjct: 327 CKDFKFQH-VDRGSTDIDVYSPVDRQSHFHNYAVPIVEGGAQSEEQYKIALHELQELLNK 386

[Close]

BLAST of Sed0012053 vs. ExPASy TrEMBL
Match: A0A6J1CJH7 (Protein FAR1-RELATED SEQUENCE OS=Momordica charantia OX=3673 GN=LOC111011994 PE=3 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 2.1e-141
Identity = 317/675 (46.96%), Postives = 333/675 (49.33%), Query Frame = 0


Query: 1   MEEVCLNSEPIFDECDEYEVDGNG--SFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAY 60
           MEEVCLNSEPIFDECDEYEVDG+G  S V N+NES +AQSKKN PLPTVGLEFDSFDEAY
Sbjct: 1   MEEVCLNSEPIFDECDEYEVDGDGDDSLVGNDNESGEAQSKKNSPLPTVGLEFDSFDEAY 60

Query: 61  DYYNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAM 120
           D+YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKK+S+ANNPRPETRTGCPAM
Sbjct: 61  DFYNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSQANNPRPETRTGCPAM 120

Query: 121 IIIKLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKKAQPQLHP--------- 180
           III+LVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKK Q Q HP         
Sbjct: 121 IIIRLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKKVQAQQHPVTEVHTIKL 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 YRTASLNGCNGCSNVDQREGISSVDHLKHLELRDGDGHALYNYFCRMKLTNPNFFYLMDL 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 DNDGRLRNVFWADARSRAAYCYFCDTVIIDTTCLNNRYEIPLISFVGVNHHGQSVLLGCG 300

Query: 301 ------------------------------------------------------------ 348
                                                                       
Sbjct: 301 FVGFEAVECFVWILKAWLRCMLGCSPQVIITDQNKKLLAAVSEVFPKACHCYSMWYIMQR 360

[Close]

BLAST of Sed0012053 vs. ExPASy TrEMBL
Match: A0A6A4KXE7 (Protein FAR1-RELATED SEQUENCE (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_15904 PE=3 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 3.1e-137
Identity = 249/371 (67.12%), Postives = 294/371 (79.25%), Query Frame = 0


Query: 1   MEEVCLNSEPIFDECDEYEVDGNGSFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAYDY 60
           ME VCLNSEP+FD  DE E +G+ S +D ++E  +  S+K  P PT+GLEF+SFDEAYD+
Sbjct: 1   MEAVCLNSEPVFDGGDECEDEGDCSIMDQDDEISETHSQKERPPPTIGLEFESFDEAYDF 60

Query: 61  YNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMII 120
           YNVYAKE GFGIRVSNSWFRSKRKERYRAKLSCSSAGFKK+SEANNPRPETRTGCPAMI+
Sbjct: 61  YNVYAKEQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMIV 120

Query: 121 IKLVDTKRWRIVEVELEHNHPVSPQITRFYKSHKKMILAAKKAQPQLHP----------- 180
           IKLVD+KRWRIVEVE++HNHPVSP + RFYKSHKKMILAAKKAQ  L P           
Sbjct: 121 IKLVDSKRWRIVEVEIQHNHPVSPDVKRFYKSHKKMILAAKKAQ-HLEPVMEVHTIKLYR 180

Query: 181 ----------------LSKLYTKEIFSKFQSEVEGMYSCFNTKQVNVNGPIVTYIVKERI 240
                           LS++YTKEIF KF SEVEGMYSCFNT+QVNVNGPI+TY+VKER+
Sbjct: 181 TAAVDVLDNGCKFELQLSRVYTKEIFKKFLSEVEGMYSCFNTRQVNVNGPIITYVVKERV 240

Query: 241 EVNGREKEVRYFEVLYETSEAGIRCICSLFNYKGYLCRHALNVLNYNGVEEIPARYILPR 300
           EV GR+KEVR +EVLYET++  IRCICSLFN+KGYLCRHALNVL YNGVEEIP+RYILPR
Sbjct: 241 EVEGRDKEVRNYEVLYETAQVDIRCICSLFNFKGYLCRHALNVLTYNGVEEIPSRYILPR 300

Query: 301 WCKDFKRRYLLD-QSLSNTNVYSSTYQYSHILNCALPVVEEGAQSEERYKFALQELEKLL 344
           WCKDFKRRY LD  ++ + +       Y+H+    + VVE+GAQS++ YK ALQ LE+LL
Sbjct: 301 WCKDFKRRYPLDYDTVDDIDANDPVQWYNHLYRRVIQVVEQGAQSQQHYKAALQGLEELL 360

[Close]

BLAST of Sed0012053 vs. TAIR 10
Match: AT1G52520.1 (FAR1-related sequence 6 )

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-49
Identity = 170/642 (26.48%), Postives = 228/642 (35.51%), Query Frame = 0


Query: 19  EVDGNGSFVDNENESVDAQSKKNPPLPTVGLEFDSFDEAYDYYNVYAKELGFGIRVSNSW 78
           E +  G F +     VD   +K    P VG+EF+S+D+AY+YYN YA E+GF +RV NSW
Sbjct: 61  EEETMGGFDEQSGLLVD--ERKEFDAPAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSW 120

Query: 79  FRSKRKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMIIIKLVDTKRWRIVEVELEH 138
           F+ + KE+Y A L CSS GFK+ ++ N  R ETRTGCPAMI ++ VD+KRWR+VEV L+H
Sbjct: 121 FKRRSKEKYGAVLCCSSQGFKRINDVNRVRKETRTGCPAMIRMRQVDSKRWRVVEVTLDH 180

Query: 139 NH-------------------PVSP----------------------------------- 198
           NH                   PVS                                    
Sbjct: 181 NHLLGCKLYKSVKRKRKCVSSPVSDAKTIKLYRACVVDNGSNVNPNSTLNKKFQNSTGSP 240

Query: 199 --------------------QITR------------------------------------ 258
                               Q+T                                     
Sbjct: 241 DLLNLKRGDSAAIYNYFCRMQLTNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFGDVI 300

Query: 259 ------------------------------------------------------------ 318
                                                                       
Sbjct: 301 FIDSSYISGKFEIPLVTFTGVNHHGKTTLLSCGFLAGETMESYHWLLKVWLSVMKRSPQT 360

Query: 319 ----------------FYKSHKKMIL------------------AAKKAQPQ-------- 341
                           F +SH++  L                  A +KA  +        
Sbjct: 361 IVTDRCKPLEAAISQVFPRSHQRFSLTHIMRKIPEKLGGLHNYDAVRKAFTKAVYETLKV 420

[Close]

BLAST of Sed0012053 vs. TAIR 10
Match: AT1G80010.1 (FAR1-related sequence 8 )

HSP 1 Score: 139.8 bits (351), Expect = 4.1e-33
Identity = 74/189 (39.15%), Postives = 111/189 (58.73%), Query Frame = 0


Query: 155 KMILAAKKAQPQLHPLSKLYTKEIFSKFQSEVEGMYSCFNTKQVNVNGPIVTYIVKERIE 214
           K+I   K   P    ++K++T EIF +FQ EV  M SCF   QV+ NG   +Y+VKER  
Sbjct: 539 KLIPKLKTTHPYESQMAKVFTMEIFRRFQDEVSAMSSCFGVTQVHSNGSASSYVVKER-- 598

Query: 215 VNGREKEVRYFEVLYETSEAG-IR--CICSLFNYKGYLCRHALNVLNYNGVEEIPARYIL 274
                 +VR FEV+YETS A  +R  C+C  F++ GY CRH L +L++NG++E+P +YIL
Sbjct: 599 ---EGDKVRDFEVIYETSAAAQVRCFCVCGGFSFNGYQCRHVLLLLSHNGLQEVPPQYIL 658

Query: 275 PRWCKDFKRRYLLDQSLSNTNVYSSTYQYSHILNCALPVVEEGAQSEERYKFALQELEKL 334
            RW KD KR Y+ +      ++ +    Y H+   A+ VVE+G +S+E  + A +   + 
Sbjct: 659 QRWRKDVKRLYVAEFGSGRVDIMNPDQWYEHLHRRAMQVVEQGMRSKEHCRAAWEAFREC 718

Query: 335 LNKLNLVED 341
            NK+  V +
Sbjct: 719 ANKVQFVTE 722

HSP 2 Score: 124.0 bits (310), Expect = 2.3e-28
Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 0


Query: 29  NENESVDAQSKKNPPLPTVGLEFDSFDEAYDYYNVYAKELGFGIRVSNSWFRSKRKERYR 88
           +EN   + +    PP PT G+EF+S+D+AY +YN YA+ELGF IRV +SW +   KE+  
Sbjct: 80  DENAFANEKCLMAPP-PTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRG 139

Query: 89  AKLSCSSAGFKKRSEANNPRPETRTGCPAMIIIKLVDTKRWRIVEVELEHNHPVSPQITR 148
           A L C+  GFK   +A++ R ETRTGC AMI ++L+   RW++ +V+L+HNH   PQ   
Sbjct: 140 AVLCCNCQGFKLLKDAHSRRKETRTGCQAMIRLRLIHFDRWKVDQVKLDHNHSFDPQRAH 199

Query: 149 FYKSHKKMILAAK---KAQPQLHPLSKLYTKEIF 180
             KSHKK   +A    K  P+  P  ++ T +++
Sbjct: 200 NSKSHKKSSSSASPATKTNPEPPPHVQVRTIKLY 232

[Close]

BLAST of Sed0012053 vs. TAIR 10
Match: AT4G19990.1 (FAR1-related sequence 1 )

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-20
Identity = 63/185 (34.05%), Postives = 99/185 (53.51%), Query Frame = 0


Query: 161 KKAQPQLHPLSKLYTKEIFSKFQSEVEGMYSCFNTKQVNVNGPIVTYIVKERIEVNGREK 220
           K   P    ++++YT+E+F KFQ EV G  +C   K+   +G     + K    V   E+
Sbjct: 382 KSPSPFGKQMAEVYTREMFKKFQVEVLGGVACHPKKESEEDG-----VNKRTFRVQDYEQ 441

Query: 221 EVRYFEVLYETSEAGIRCICSLFNYKGYLCRHALNVLNYNGVEEIPARYILPRWCKDFKR 280
             R F V++ +  + + C C LF  KG+LCRHA+ VL  +G   IP++Y+L RW KD K 
Sbjct: 442 N-RSFVVVWNSESSEVVCSCRLFELKGFLCRHAMIVLQMSGELSIPSQYVLKRWTKDAKS 501

Query: 281 RYLLDQSLSNTNVYSSTYQ-YSHILNCALPVVEEGAQSEERYKFALQELEKLL----NKL 340
           R +++     T+V S+  Q Y  +   +L + EE + SEE Y   +  L + L    NK 
Sbjct: 502 REVMES--DQTDVESTKAQRYKDLCLRSLKLSEEASLSEESYNAVVNVLNEALRKWENKS 558

[Close]

BLAST of Sed0012053 vs. TAIR 10
Match: AT4G19990.2 (FAR1-related sequence 1 )

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-20
Identity = 63/185 (34.05%), Postives = 99/185 (53.51%), Query Frame = 0


Query: 161 KKAQPQLHPLSKLYTKEIFSKFQSEVEGMYSCFNTKQVNVNGPIVTYIVKERIEVNGREK 220
           K   P    ++++YT+E+F KFQ EV G  +C   K+   +G     + K    V   E+
Sbjct: 447 KSPSPFGKQMAEVYTREMFKKFQVEVLGGVACHPKKESEEDG-----VNKRTFRVQDYEQ 506

Query: 221 EVRYFEVLYETSEAGIRCICSLFNYKGYLCRHALNVLNYNGVEEIPARYILPRWCKDFKR 280
             R F V++ +  + + C C LF  KG+LCRHA+ VL  +G   IP++Y+L RW KD K 
Sbjct: 507 N-RSFVVVWNSESSEVVCSCRLFELKGFLCRHAMIVLQMSGELSIPSQYVLKRWTKDAKS 566

Query: 281 RYLLDQSLSNTNVYSSTYQ-YSHILNCALPVVEEGAQSEERYKFALQELEKLL----NKL 340
           R +++     T+V S+  Q Y  +   +L + EE + SEE Y   +  L + L    NK 
Sbjct: 567 REVMES--DQTDVESTKAQRYKDLCLRSLKLSEEASLSEESYNAVVNVLNEALRKWENKS 623

[Close]

BLAST of Sed0012053 vs. TAIR 10
Match: AT3G22170.1 (far-red elongated hypocotyls 3 )

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-20
Identity = 61/171 (35.67%), Postives = 91/171 (53.22%), Query Frame = 0


Query: 159 AAKKAQPQLHPLSKLYTKEIFSKFQSEVEGMYSCFNTKQVNVNGPIVTYIVKERIEVNGR 218
           A K   P    +S++YT  +F KFQ EV G  +C + ++ N +    T+ V++  E N  
Sbjct: 506 AMKSPSPFEKSVSEVYTPAVFKKFQIEVLGAIAC-SPREENRDATCSTFRVQD-FENN-- 565

Query: 219 EKEVRYFEVLYETSEAGIRCICSLFNYKGYLCRHALNVLNYNGVEEIPARYILPRWCKDF 278
               + F V +  ++A + CIC LF YKGYLCRH LNVL    +  IP++YIL RW KD 
Sbjct: 566 ----QDFMVTWNQTKAEVSCICRLFEYKGYLCRHTLNVLQCCHLSSIPSQYILKRWTKDA 625

Query: 279 KRRYLLDQSLSNTNVYSSTYQYSHILNCALPVVEEGAQSEERYKFALQELE 330
           K R+    S     + +   +Y+ +   AL + EE + S+E Y  A   +E
Sbjct: 626 KSRHF---SGEPQQLQTRLLRYNDLCERALKLNEEASLSQESYNIAFLAIE 665

HSP 2 Score: 47.8 bits (112), Expect = 2.1e-05
Identity = 24/68 (35.29%), Postives = 36/68 (52.94%), Query Frame = 0


Query: 45  PTVGLEFDSFDEAYDYYNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKRSEA 104
           P  G+EF+S  EAY +Y  Y++ +GF   + NS      +E   AK +CS  G K+  + 
Sbjct: 70  PLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDK 129

Query: 105 NNPRPETR 113
           +  RP  R
Sbjct: 130 SFNRPRAR 137

The following BLAST results are available for this feature:

BLAST of Sed0012053 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524103.1	6.4e-145	47.55	protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
KAG6608163.1	6.4e-145	47.55	Protein FAR1-RELATED SEQUENCE 6, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_022941205.1	6.4e-145	47.55	protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita moschata] >XP_0229412...	[more]
XP_022982131.1	1.4e-144	47.40	protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita maxima] >XP_022982132...	[more]
KHG04174.1	1.2e-143	69.21	far1-related sequence 6 -like protein [Gossypium arboreum]	[more]

BLAST of Sed0012053 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSQ4	2.6e-48	26.48	Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=FRS6 PE=2 SV=...	[more]
Q9S793	5.8e-32	39.15	Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana OX=3702 GN=FRS8 PE=2 SV=...	[more]
Q5UBY2	2.5e-19	34.05	Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=FRS1 PE=1 SV=...	[more]
Q9LIE5	3.3e-19	35.67	Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE...	[more]
Q9SWG3	7.3e-19	33.83	Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1...	[more]

BLAST of Sed0012053 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKH3	3.1e-145	47.55	Protein FAR1-RELATED SEQUENCE OS=Cucurbita moschata OX=3662 GN=LOC111446583 PE=3...	[more]
A0A6J1J427	6.9e-145	47.40	Protein FAR1-RELATED SEQUENCE OS=Cucurbita maxima OX=3661 GN=LOC111481060 PE=3 S...	[more]
A0A0B0MXF2	5.8e-144	69.21	Protein FAR1-RELATED SEQUENCE OS=Gossypium arboreum OX=29729 GN=F383_29583 PE=3 ...	[more]
A0A6J1CJH7	2.1e-141	46.96	Protein FAR1-RELATED SEQUENCE OS=Momordica charantia OX=3673 GN=LOC111011994 PE=...	[more]
A0A6A4KXE7	3.1e-137	67.12	Protein FAR1-RELATED SEQUENCE (Fragment) OS=Rhododendron williamsianum OX=262921...	[more]

BLAST of Sed0012053 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52520.1	1.8e-49	26.48	FAR1-related sequence 6	[more]
AT1G80010.1	4.1e-33	39.15	FAR1-related sequence 8	[more]
AT4G19990.1	1.8e-20	34.05	FAR1-related sequence 1	[more]
AT4G19990.2	1.8e-20	34.05	FAR1-related sequence 1	[more]
AT3G22170.1	2.3e-20	35.67	far-red elongated hypocotyls 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 314..341
None	No IPR available	PANTHER	PTHR31669:SF88	PROTEIN FAR1-RELATED SEQUENCE 6-LIKE ISOFORM X1	coord: 170..339
None	No IPR available	PANTHER	PTHR31669:SF88	PROTEIN FAR1-RELATED SEQUENCE 6-LIKE ISOFORM X1	coord: 20..170
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 236..263 e-value: 1.6E-6 score: 37.7
IPR007527	Zinc finger, SWIM-type	PFAM	PF04434	SWIM	coord: 231..258 e-value: 1.5E-4 score: 21.4
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 225..261 score: 9.297277
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 59..143 e-value: 7.4E-24 score: 84.3
IPR031052	FHY3/FAR1 family	PANTHER	PTHR31669	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	coord: 20..170 coord: 170..339

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012053.1	Sed0012053.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding