Sed0012039 (gene) Chayote v1

Overview


Name	Sed0012039
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ATP synthase mitochondrial F1 complex assembly factor 2
Location	LG08: 28955663 .. 28957340 (+)
RNA-Seq Expression	Sed0012039
Synteny	Sed0012039

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAATTTGCAAATCCTCCCTTTCTTCCCCAATTTCCAAAGCCCTAACAATTGCAAGAAAAACCCAGCGACAATGGCGAAATCAATCAGAATCACCAACAGTTCCATCTCTCTCATTTCACTTGCGTACGCTCACTACCAGTGTCGCCACCGCCGCCGAACAATCGGAATCCGCCTCCTTCACTTTCTCCGATGGCAATGCGAATGAAAATCATGTATTCCTCAAGGCTCCTATCTCAAATTCCAGAGCCGATTCTCCATCCTTTTCGAGCTCGTCGGCCACCATGCCGACCTCTTTCATGACCGGTTCCATCGTCGGCTAGCGGTTTTACCAGCAAGTGACGACGAGGGAGGCGGATGATCGGAATCGATGGACGGTCATGCTTCGCCAACGCAGTTGGGGCTGAGTGGGAATATCAGGTGCTTTTTCCTATCTTTTGTTAGAATAAACATCAGTAAGACATTATCCACGACTTGATTGTATTAATAGATATTGGTTCGGCTGCGTTATCGACGACAGTTTGACGAGTGAAATCTGCGCGATTTGTGTGCTTCAATAAGTTAAATATCTTGTTTGCTGTATATTCGGTTTGACTGTGAGATTGACATGTCCGGGATGCAATGACTTTGTTTTCATGCTCCAACTTGAAGAGGAATGTTAGATATTATAGCATTGGATATTATTTGATATGCTCTAAGATTTATCACTACATTTATTAGATATCATATCGTATTTGTTACGAGATTTTGTAGGATTTAATATTTCATGCACTATAAATTTCTCAAATTTATCATCTTTTGATCTTGATAGTTATTTTCAACCTGTTCTGAATTTTGTTTTATCTGGATTGTAATGAAGCTTTGATTGTTGTAGGAAACAGATGGAATCAGACCATTCACAATGCCTCTAATGAAATTGGCATGTACTGTGCCTCTTACACGGCCCAAGATTATTGAACATTTGATGAACAAATTCAATCAAGATTTGGTTTTCTGTCGTGCTCCACAGGACGATGATCAAACAACTGGAGTCTATGGTATGTCAAGTAATCCTATGGTGTGTTAATTCAAAACCATACTTGAATTAAAAGTTGATAAACGATATAATTATCTAGGAATGTGTTTTCATAAATGTTCAAGGACATAATCGGTGTTACATATTCCTCGTAGAACGGCAAGCAGAAAAAATCGATCCCTTACTTGACTGGGTACACTCAGAATTTGGCTTTAAGCCTAATGTATATTCTAGCTTTTTTGGTGGGAAGCAAGAGGACACCATCAAGACTGTGGAAGATCTTCTACGGAAATCAGATGACTGTGAATTGGCATCAATTGATGCCATTGCATCAGCTGCACACTCTTTAATAATTGCTATTGGAATTTTTCGCGGGAAGTTGCAGATCAAAGAAGCAATCGAGTTGGTTAGACTCGAAGAAGATCTGCAGGTCTTACTTTCTCTCTAGTCTCTCTCCCTGACCCTCTTCTTTATCATACATATTTCTGTGTCTAGGAAGAAGAAAATGCATCAACGTGTTCTAAACAAAAAAGAACCTGCTTCAACGTTTGCAGGTCGATAAGTGGGGTCTGGTTGAAGGTGGTCACGATGTCGACGTTGCTGATCTACTGGTTCAAATCTCATCCGCCACAGTATTTCTTGCTCTTTCCAGTAGGTTTTGA

mRNA sequence

ATGCCAATTTGCAAATCCTCCCTTTCTTCCCCAATTTCCAAAGCCCTAACAATTGCAAGAAAAACCCAGCGACAATGGCGAAATCAATCAGAATCACCAACAGTTCCATCTCTCTCATTTCACTTGCGTACGCTCACTACCAGTGTCGCCACCGCCGCCGAACAATCGGAATCCGCCTCCTTCACTTTCTCCGATGGCAATGCGAATGAAAATCATGTATTCCTCAAGGCTCCTATCTCAAATTCCAGAGCCGATTCTCCATCCTTTTCGAGCTCGTCGGCCACCATGCCGACCTCTTTCATGACCGTGACGACGAGGGAGGCGGATGATCGGAATCGATGGACGGTCATGCTTCGCCAACGCAATGGAATCAGACCATTCACAATGCCTCTAATGAAATTGGCATGTACTGTGCCTCTTACACGGCCCAAGATTATTGAACATTTGATGAACAAATTCAATCAAGATTTGGTTTTCTGTCGTGCTCCACAGGACGATGATCAAACAACTGGAGTCTATGAACGGCAAGCAGAAAAAATCGATCCCTTACTTGACTGGGTACACTCAGAATTTGGCTTTAAGCCTAATGTATATTCTAGCTTTTTTGGTGGGAAGCAAGAGGACACCATCAAGACTGTGGAAGATCTTCTACGGAAATCAGATGACTGTGAATTGGCATCAATTGATGCCATTGCATCAGCTGCACACTCTTTAATAATTGCTATTGGAATTTTTCGCGGGAAGTTGCAGATCAAAGAAGCAATCGAGTTGGTTAGACTCGAAGAAGATCTGCAGGTCGATAAGTGGGGTCTGGTTGAAGGTGGTCACGATGTCGACGTTGCTGATCTACTGGTTCAAATCTCATCCGCCACAGTATTTCTTGCTCTTTCCAGTAGGTTTTGA

Coding sequence (CDS)

ATGCCAATTTGCAAATCCTCCCTTTCTTCCCCAATTTCCAAAGCCCTAACAATTGCAAGAAAAACCCAGCGACAATGGCGAAATCAATCAGAATCACCAACAGTTCCATCTCTCTCATTTCACTTGCGTACGCTCACTACCAGTGTCGCCACCGCCGCCGAACAATCGGAATCCGCCTCCTTCACTTTCTCCGATGGCAATGCGAATGAAAATCATGTATTCCTCAAGGCTCCTATCTCAAATTCCAGAGCCGATTCTCCATCCTTTTCGAGCTCGTCGGCCACCATGCCGACCTCTTTCATGACCGTGACGACGAGGGAGGCGGATGATCGGAATCGATGGACGGTCATGCTTCGCCAACGCAATGGAATCAGACCATTCACAATGCCTCTAATGAAATTGGCATGTACTGTGCCTCTTACACGGCCCAAGATTATTGAACATTTGATGAACAAATTCAATCAAGATTTGGTTTTCTGTCGTGCTCCACAGGACGATGATCAAACAACTGGAGTCTATGAACGGCAAGCAGAAAAAATCGATCCCTTACTTGACTGGGTACACTCAGAATTTGGCTTTAAGCCTAATGTATATTCTAGCTTTTTTGGTGGGAAGCAAGAGGACACCATCAAGACTGTGGAAGATCTTCTACGGAAATCAGATGACTGTGAATTGGCATCAATTGATGCCATTGCATCAGCTGCACACTCTTTAATAATTGCTATTGGAATTTTTCGCGGGAAGTTGCAGATCAAAGAAGCAATCGAGTTGGTTAGACTCGAAGAAGATCTGCAGGTCGATAAGTGGGGTCTGGTTGAAGGTGGTCACGATGTCGACGTTGCTGATCTACTGGTTCAAATCTCATCCGCCACAGTATTTCTTGCTCTTTCCAGTAGGTTTTGA

Protein sequence

MPICKSSLSSPISKALTIARKTQRQWRNQSESPTVPSLSFHLRTLTTSVATAAEQSESASFTFSDGNANENHVFLKAPISNSRADSPSFSSSSATMPTSFMTVTTREADDRNRWTVMLRQRNGIRPFTMPLMKLACTVPLTRPKIIEHLMNKFNQDLVFCRAPQDDDQTTGVYERQAEKIDPLLDWVHSEFGFKPNVYSSFFGGKQEDTIKTVEDLLRKSDDCELASIDAIASAAHSLIIAIGIFRGKLQIKEAIELVRLEEDLQVDKWGLVEGGHDVDVADLLVQISSATVFLALSSRF

Homology

[Close]

BLAST of Sed0012039 vs. NCBI nr
Match: XP_038878128.1 (ATP synthase mitochondrial F1 complex assembly factor 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 388.3 bits (996), Expect = 6.1e-104
Identity = 225/343 (65.60%), Postives = 252/343 (73.47%), Query Frame = 0


Query: 6   SSLSSPISKALTIARKTQRQWRNQSESPTVPSLSFHLRTLTTSVATAAEQS--ESASFTF 65
           SS+ S ++K++ I  +T            +PS  F  R L TSVATA+EQ+  ++ASFTF
Sbjct: 3   SSILSKMAKSVRITNRT-----------LIPSHLFRCRMLCTSVATASEQAQFDAASFTF 62

Query: 66  SDGNANENHVFLKAPISNSRADSPSFSSSSATMPTSFMT-----------VTTREADDRN 125
           S+ NA E+ +F+KAP+SN RADS S SSSS TMPTSFMT           VTTREADDRN
Sbjct: 63  SEDNATEDPIFVKAPVSNCRADSSSPSSSSVTMPTSFMTGSVVGKRFYQQVTTREADDRN 122

Query: 126 RWTVML------------------------------RQRNGIRPFTMPLMKLACT----V 185
            W VML                              ++ +GIRPFTMPLMKLACT    V
Sbjct: 123 GWMVMLDYRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFTMPLMKLACTALERV 182

Query: 186 PLTRPKIIEHLMNKFNQDLVFCRAPQDDDQTTGVYERQAEKIDPLLDWVHSEFGFKPNVY 245
           PLTRPKIIEHLM KFNQDLVFCRAP+D+  T+GVYERQ EKIDPLLDWV SEFGFKP VY
Sbjct: 183 PLTRPKIIEHLMKKFNQDLVFCRAPEDNVLTSGVYERQVEKIDPLLDWVGSEFGFKPVVY 242

Query: 246 SSFFGGKQED-TIKTVEDLLRKSDDCELASIDAIASAAHSLIIAIGIFRGKLQIKEAIEL 301
           SSFFGGKQED  IK VEDLLRK+DDCELASIDAIASAAHSLIIAIGIFRGKLQI+EAIEL
Sbjct: 243 SSFFGGKQEDGLIKAVEDLLRKTDDCELASIDAIASAAHSLIIAIGIFRGKLQIEEAIEL 302

[Close]

BLAST of Sed0012039 vs. NCBI nr
Match: XP_022934998.1 (ATP synthase mitochondrial F1 complex assembly factor 2 [Cucurbita moschata])

HSP 1 Score: 385.2 bits (988), Expect = 5.2e-103
Identity = 224/343 (65.31%), Postives = 251/343 (73.18%), Query Frame = 0


Query: 6   SSLSSPISKALTIARKTQRQWRNQSESPTVPSLSFHLRTLTTSVATAAEQS--ESASFTF 65
           SS+ + ++K++ IA  T            +PS SF  RTLTTSVATAAEQS  ++ASFTF
Sbjct: 3   SSILAKMAKSIRIANPT-----------LIPSHSFRWRTLTTSVATAAEQSQADAASFTF 62

Query: 66  SDGNANENHVFLKAPISNSRADSPSFSSSSATMPTSFMT-----------VTTREADDRN 125
           S+ +A E+ +F+KAP SNS  DS S+SSSS TMPTSFMT           VTTREADDRN
Sbjct: 63  SEDSAREDPIFVKAPNSNSGDDSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDRN 122

Query: 126 RWTVML------------------------------RQRNGIRPFTMPLMKLACT----V 185
            WTVML                              ++ +GIRPF+MPLMKLACT    V
Sbjct: 123 GWTVMLDYRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERV 182

Query: 186 PLTRPKIIEHLMNKFNQDLVFCRAPQDDDQTTGVYERQAEKIDPLLDWVHSEFGFKPNVY 245
           PLTRPKIIEHL+ KFNQDLVFCRAP D+  T+GVYERQ EKIDPLLDWV  EFGFKP VY
Sbjct: 183 PLTRPKIIEHLVQKFNQDLVFCRAPDDNVLTSGVYERQVEKIDPLLDWVRLEFGFKPIVY 242

Query: 246 SSFFGGKQED-TIKTVEDLLRKSDDCELASIDAIASAAHSLIIAIGIFRGKLQIKEAIEL 301
           SSFFGGKQED  IK VEDLLRK+DDCELASIDAIASAAHSL+IAI IFRGKLQI+EAIEL
Sbjct: 243 SSFFGGKQEDGLIKAVEDLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIEL 302

[Close]

BLAST of Sed0012039 vs. NCBI nr
Match: XP_023527484.1 (ATP synthase mitochondrial F1 complex assembly factor 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382.5 bits (981), Expect = 3.4e-102
Identity = 222/343 (64.72%), Postives = 250/343 (72.89%), Query Frame = 0


Query: 6   SSLSSPISKALTIARKTQRQWRNQSESPTVPSLSFHLRTLTTSVATAAEQS--ESASFTF 65
           SS+ + ++K++ IA  T            +PS SF  RTLTTSVATAAEQS  ++ASFTF
Sbjct: 3   SSILAKMAKSIRIANPT-----------LIPSHSFRWRTLTTSVATAAEQSQADAASFTF 62

Query: 66  SDGNANENHVFLKAPISNSRADSPSFSSSSATMPTSFMT-----------VTTREADDRN 125
           S+ +  E+ +F+KAP + S ADS S+SSSS TMPTSFMT           VTTREADDRN
Sbjct: 63  SEDSTREDPIFVKAPNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDRN 122

Query: 126 RWTVML------------------------------RQRNGIRPFTMPLMKLACT----V 185
            WTVML                              ++ +GIRPF+MPLMKLACT    V
Sbjct: 123 GWTVMLDYRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERV 182

Query: 186 PLTRPKIIEHLMNKFNQDLVFCRAPQDDDQTTGVYERQAEKIDPLLDWVHSEFGFKPNVY 245
           PLTRPKIIEHL+ KFNQDLVFCRAP D+  T+GVYERQ EKIDPLLDWV  EFGFKP VY
Sbjct: 183 PLTRPKIIEHLVQKFNQDLVFCRAPDDNVLTSGVYERQVEKIDPLLDWVRLEFGFKPIVY 242

Query: 246 SSFFGGKQED-TIKTVEDLLRKSDDCELASIDAIASAAHSLIIAIGIFRGKLQIKEAIEL 301
           SSFFGGKQED  IK VEDLLRK+DDCELASIDAIASAAHSL+IAI IFRGKLQI+EAIEL
Sbjct: 243 SSFFGGKQEDGLIKAVEDLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIEL 302

[Close]

BLAST of Sed0012039 vs. NCBI nr
Match: KAG7017797.1 (ATP synthase mitochondrial F1 complex assembly factor 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.6 bits (976), Expect = 1.3e-101
Identity = 222/343 (64.72%), Postives = 249/343 (72.59%), Query Frame = 0


Query: 6   SSLSSPISKALTIARKTQRQWRNQSESPTVPSLSFHLRTLTTSVATAAEQS--ESASFTF 65
           SS+ + ++K++ IA  T            +PS SF  RTLTTSVATAAEQS  ++ASFTF
Sbjct: 3   SSILAKMAKSIRIANPT-----------LIPSHSFRWRTLTTSVATAAEQSQADAASFTF 62

Query: 66  SDGNANENHVFLKAPISNSRADSPSFSSSSATMPTSFMT-----------VTTREADDRN 125
           S+ +A E+ +F+KAP S S  DS S+SSSS TMPTSFMT           VTTREADD N
Sbjct: 63  SEDSAREDPIFVKAPNSKSGDDSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDSN 122

Query: 126 RWTVML------------------------------RQRNGIRPFTMPLMKLACT----V 185
            WTVML                              ++ +GIRPF+MPLMKLACT    V
Sbjct: 123 GWTVMLDYRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERV 182

Query: 186 PLTRPKIIEHLMNKFNQDLVFCRAPQDDDQTTGVYERQAEKIDPLLDWVHSEFGFKPNVY 245
           PLTRPKIIEHL+ KFNQDLVFCRAP D+  T+GVYERQ EKIDPLLDWV  EFGFKP VY
Sbjct: 183 PLTRPKIIEHLVQKFNQDLVFCRAPDDNVLTSGVYERQVEKIDPLLDWVRLEFGFKPIVY 242

Query: 246 SSFFGGKQED-TIKTVEDLLRKSDDCELASIDAIASAAHSLIIAIGIFRGKLQIKEAIEL 301
           SSFFGGKQED  IK VEDLLRK+DDCELASIDAIASAAHSL+IAI IFRGKLQI+EAIEL
Sbjct: 243 SSFFGGKQEDGLIKAVEDLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIEL 302

[Close]

BLAST of Sed0012039 vs. NCBI nr
Match: XP_022983210.1 (ATP synthase mitochondrial F1 complex assembly factor 2 [Cucurbita maxima])

HSP 1 Score: 380.2 bits (975), Expect = 1.7e-101
Identity = 222/343 (64.72%), Postives = 249/343 (72.59%), Query Frame = 0


Query: 6   SSLSSPISKALTIARKTQRQWRNQSESPTVPSLSFHLRTLTTSVATAAEQS--ESASFTF 65
           SS+ + ++K++ IA  T            +P  SF  RTLTTSVATAAEQS  ++ASFTF
Sbjct: 3   SSILAKMAKSIRIANPT-----------LIPFHSFRWRTLTTSVATAAEQSQADAASFTF 62

Query: 66  SDGNANENHVFLKAPISNSRADSPSFSSSSATMPTSFMT-----------VTTREADDRN 125
           S+ +A E+ +F+KAP S S ADS S S+SS TMPTSFMT           VTTREADDRN
Sbjct: 63  SEDSAREDPIFVKAPNSKSGADSSSHSNSSVTMPTSFMTGSVVGKRFYKQVTTREADDRN 122

Query: 126 RWTVML------------------------------RQRNGIRPFTMPLMKLACT----V 185
            WTVML                              ++ +GIRPF+MPLMKLACT    V
Sbjct: 123 GWTVMLDYRTLKTPSKRPLKLPTVGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERV 182

Query: 186 PLTRPKIIEHLMNKFNQDLVFCRAPQDDDQTTGVYERQAEKIDPLLDWVHSEFGFKPNVY 245
           PLTRPKIIEHL+ KFNQDLVFCRAP D+  T+GVYERQ EKIDPLLDWV  EFGFKP VY
Sbjct: 183 PLTRPKIIEHLVQKFNQDLVFCRAPDDNVLTSGVYERQVEKIDPLLDWVRLEFGFKPIVY 242

Query: 246 SSFFGGKQED-TIKTVEDLLRKSDDCELASIDAIASAAHSLIIAIGIFRGKLQIKEAIEL 301
           SSFFGGKQED  IK VEDLLRK+DDCELASIDAIASAAHSL+IAI IFRGKLQI+EAIEL
Sbjct: 243 SSFFGGKQEDGLIKAVEDLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIEL 302

[Close]

BLAST of Sed0012039 vs. ExPASy Swiss-Prot
Match: Q8N5M1 (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Homo sapiens OX=9606 GN=ATPAF2 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-11
Identity = 46/186 (24.73%), Postives = 93/186 (50.00%), Query Frame = 0


Query: 120 QRNGIRPFTMPLMKLACTVPLTRP------KIIEHLMNKFNQDLVFCRAPQDDDQTTGVY 179
           Q++ I+ +TM L  L C   L  P      ++I   +   + D +  R  + +     + 
Sbjct: 97  QQDTIKYYTMHLTTL-CNTSLDNPTQRNKDQLIRAAVKFLDTDTICYRVEEPET----LV 156

Query: 180 ERQAEKIDPLLDWVHSEFGFKPNVYSSFFGGK-QEDTIKTVEDLLRKSDDCELASIDAIA 239
           E Q  + DP+++W    +G + +  +S  G      T + +   L   +   L  I+ +A
Sbjct: 157 ELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVA 216

Query: 240 SAAHSLIIAIGIFRGKLQIKEAIELVRLEEDLQVDKWGLVEGGHDVDVADLLVQISSATV 299
           +   S+++ +G+   +L +++A+ L RLEE+ Q+ KWG +E  HD ++ +L  + ++ T+
Sbjct: 217 AQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTL 276

[Close]

BLAST of Sed0012039 vs. ExPASy Swiss-Prot
Match: Q91YY4 (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Mus musculus OX=10090 GN=Atpaf2 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10
Identity = 45/186 (24.19%), Postives = 91/186 (48.92%), Query Frame = 0


Query: 120 QRNGIRPFTMPLMKLACTVPLTRP------KIIEHLMNKFNQDLVFCRAPQDDDQTTGVY 179
           Q++ I+ +TM L  L C   L  P      ++I   +   + D +  R  + +     + 
Sbjct: 97  QQDTIKFYTMHLTTL-CNTSLDNPTQRSKDQLIRAAVKFLDTDTICYRVEEPET----LV 156

Query: 180 ERQAEKIDPLLDWVHSEFGFKPNVYSSFFGGK-QEDTIKTVEDLLRKSDDCELASIDAIA 239
           E Q  + DP+++W    +G +    +S  G      T + +   L   +   L  I+ + 
Sbjct: 157 ELQKNEWDPVIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSHLSSYNMWALQGIEFVV 216

Query: 240 SAAHSLIIAIGIFRGKLQIKEAIELVRLEEDLQVDKWGLVEGGHDVDVADLLVQISSATV 299
           +   S+++ +G+   +L +++A+ L RLEE+ Q+ KWG +E  HD ++ +L  + ++ T+
Sbjct: 217 AQLKSMLLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTL 276

[Close]

BLAST of Sed0012039 vs. ExPASy Swiss-Prot
Match: Q1LZ96 (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Bos taurus OX=9913 GN=ATPAF2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.1e-10
Identity = 47/186 (25.27%), Postives = 90/186 (48.39%), Query Frame = 0


Query: 120 QRNGIRPFTMPLMKLACTVPLTRP------KIIEHLMNKFNQDLVFCRAPQDDDQTTGVY 179
           Q++ I+ +TM L  L C   L  P      ++I   +   + D V  R  + +     + 
Sbjct: 97  QQDTIKMYTMHLTTL-CNTSLDNPTQRDKDQLIRAAVKFLDTDTVCYRVEEPET----LV 156

Query: 180 ERQAEKIDPLLDWVHSEFGFKPNVYSSFFGGK-QEDTIKTVEDLLRKSDDCELASIDAIA 239
           E Q  + DP++ W    +G +    +S  G      T + +   L   +   L  I+ + 
Sbjct: 157 ELQRNEWDPVISWAEKRYGVEIGSSTSITGPSIPARTREVLVSHLASYNMWALQGIEFVV 216

Query: 240 SAAHSLIIAIGIFRGKLQIKEAIELVRLEEDLQVDKWGLVEGGHDVDVADLLVQISSATV 299
           +   SL++ +G+   +L +++A+ L RLEE+ Q+ KWG +E  HD ++ +L  + ++ T+
Sbjct: 217 TQLKSLVLTLGLTDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTL 276

[Close]

BLAST of Sed0012039 vs. ExPASy TrEMBL
Match: A0A6J1F9A4 (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111441992 PE=3 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.5e-103
Identity = 224/343 (65.31%), Postives = 251/343 (73.18%), Query Frame = 0


Query: 6   SSLSSPISKALTIARKTQRQWRNQSESPTVPSLSFHLRTLTTSVATAAEQS--ESASFTF 65
           SS+ + ++K++ IA  T            +PS SF  RTLTTSVATAAEQS  ++ASFTF
Sbjct: 3   SSILAKMAKSIRIANPT-----------LIPSHSFRWRTLTTSVATAAEQSQADAASFTF 62

Query: 66  SDGNANENHVFLKAPISNSRADSPSFSSSSATMPTSFMT-----------VTTREADDRN 125
           S+ +A E+ +F+KAP SNS  DS S+SSSS TMPTSFMT           VTTREADDRN
Sbjct: 63  SEDSAREDPIFVKAPNSNSGDDSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDRN 122

Query: 126 RWTVML------------------------------RQRNGIRPFTMPLMKLACT----V 185
            WTVML                              ++ +GIRPF+MPLMKLACT    V
Sbjct: 123 GWTVMLDYRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERV 182

Query: 186 PLTRPKIIEHLMNKFNQDLVFCRAPQDDDQTTGVYERQAEKIDPLLDWVHSEFGFKPNVY 245
           PLTRPKIIEHL+ KFNQDLVFCRAP D+  T+GVYERQ EKIDPLLDWV  EFGFKP VY
Sbjct: 183 PLTRPKIIEHLVQKFNQDLVFCRAPDDNVLTSGVYERQVEKIDPLLDWVRLEFGFKPIVY 242

Query: 246 SSFFGGKQED-TIKTVEDLLRKSDDCELASIDAIASAAHSLIIAIGIFRGKLQIKEAIEL 301
           SSFFGGKQED  IK VEDLLRK+DDCELASIDAIASAAHSL+IAI IFRGKLQI+EAIEL
Sbjct: 243 SSFFGGKQEDGLIKAVEDLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIEL 302

[Close]

BLAST of Sed0012039 vs. ExPASy TrEMBL
Match: A0A6J1J577 (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111481861 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 8.1e-102
Identity = 222/343 (64.72%), Postives = 249/343 (72.59%), Query Frame = 0


Query: 6   SSLSSPISKALTIARKTQRQWRNQSESPTVPSLSFHLRTLTTSVATAAEQS--ESASFTF 65
           SS+ + ++K++ IA  T            +P  SF  RTLTTSVATAAEQS  ++ASFTF
Sbjct: 3   SSILAKMAKSIRIANPT-----------LIPFHSFRWRTLTTSVATAAEQSQADAASFTF 62

Query: 66  SDGNANENHVFLKAPISNSRADSPSFSSSSATMPTSFMT-----------VTTREADDRN 125
           S+ +A E+ +F+KAP S S ADS S S+SS TMPTSFMT           VTTREADDRN
Sbjct: 63  SEDSAREDPIFVKAPNSKSGADSSSHSNSSVTMPTSFMTGSVVGKRFYKQVTTREADDRN 122

Query: 126 RWTVML------------------------------RQRNGIRPFTMPLMKLACT----V 185
            WTVML                              ++ +GIRPF+MPLMKLACT    V
Sbjct: 123 GWTVMLDYRTLKTPSKRPLKLPTVGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERV 182

Query: 186 PLTRPKIIEHLMNKFNQDLVFCRAPQDDDQTTGVYERQAEKIDPLLDWVHSEFGFKPNVY 245
           PLTRPKIIEHL+ KFNQDLVFCRAP D+  T+GVYERQ EKIDPLLDWV  EFGFKP VY
Sbjct: 183 PLTRPKIIEHLVQKFNQDLVFCRAPDDNVLTSGVYERQVEKIDPLLDWVRLEFGFKPIVY 242

Query: 246 SSFFGGKQED-TIKTVEDLLRKSDDCELASIDAIASAAHSLIIAIGIFRGKLQIKEAIEL 301
           SSFFGGKQED  IK VEDLLRK+DDCELASIDAIASAAHSL+IAI IFRGKLQI+EAIEL
Sbjct: 243 SSFFGGKQEDGLIKAVEDLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIEL 302

[Close]

BLAST of Sed0012039 vs. ExPASy TrEMBL
Match: A0A6J1DKX6 (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Momordica charantia OX=3673 GN=LOC111021477 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 3.4e-100
Identity = 220/335 (65.67%), Postives = 245/335 (73.13%), Query Frame = 0


Query: 15  ALTIARKTQRQWRNQSESPTVPSLSFHLRTLTTSVATAAE---QSESASFTFSDGNANEN 74
           A +I  K  +  R  + +P + +  F  RTLT++VA   E    ++SASFTFSDG+A E+
Sbjct: 2   ASSILAKMAKSIRITNLTP-IAAHPFRSRTLTSTVAAVEEAQSDAQSASFTFSDGSARED 61

Query: 75  HVFLKAPISNSRADSPSFSSSSATMPTSFMT-----------VTTREADDRNRWTVML-- 134
            +F+KAPISNSRADS S SSSS TMPTSFMT           VTTREADD N WTVML  
Sbjct: 62  AIFVKAPISNSRADSSSPSSSSVTMPTSFMTGSVVGKRFYQQVTTREADDGNGWTVMLDY 121

Query: 135 ----------------------------RQRNGIRPFTMPLMKLACT----VPLTRPKII 194
                                       ++ +GIRPFTMPLMKLACT    VPLTRPKII
Sbjct: 122 RTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFTMPLMKLACTALERVPLTRPKII 181

Query: 195 EHLMNKFNQDLVFCRAPQDDDQTTGVYERQAEKIDPLLDWVHSEFGFKPNVYSSFFGGKQ 254
            HLM KFNQDLVFCRAP+D+  T+GV+ERQ EKIDPLLDWV SEFGFKP VYSSFFGGKQ
Sbjct: 182 AHLMKKFNQDLVFCRAPEDNVLTSGVHERQVEKIDPLLDWVGSEFGFKPVVYSSFFGGKQ 241

Query: 255 ED-TIKTVEDLLRKSDDCELASIDAIASAAHSLIIAIGIFRGKLQIKEAIELVRLEEDLQ 301
           ED  IK VEDLLRK+D CELASIDAIASAAHSLIIAIGIFRGKLQI+EAIEL+RLEEDLQ
Sbjct: 242 EDGLIKAVEDLLRKTDYCELASIDAIASAAHSLIIAIGIFRGKLQIEEAIELIRLEEDLQ 301

[Close]

BLAST of Sed0012039 vs. ExPASy TrEMBL
Match: E5GCD8 (ATP12-like protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.4e-98
Identity = 220/318 (69.18%), Postives = 236/318 (74.21%), Query Frame = 0


Query: 32  SPTV-PSLSFHLRTLTTSVATAAEQ--SESASFTFSDGNANENHVFLKAPISNSRADSPS 91
           +PT+ PS SF  R L TSVATA EQ  S++ASFTFS+ N  E  VF+KAP SNS   SP 
Sbjct: 17  NPTLTPSHSFRYRMLCTSVATAPEQSPSDAASFTFSNDNPREEPVFIKAPRSNS--SSP- 76

Query: 92  FSSSSATMPTSFMT-----------VTTREADDRNRWTVML------------------- 151
            SSSS TMPTSFMT           VTTREADD N WTVML                   
Sbjct: 77  -SSSSVTMPTSFMTGSIVGKRFYQKVTTREADDGNGWTVMLDYRTLKTPTKRPLKLPTLG 136

Query: 152 -----------RQRNGIRPFTMPLMKLACT----VPLTRPKIIEHLMNKFNQDLVFCRAP 211
                      ++ +GIRPFTMPLMKLACT    VPLTRPKIIEHLM KFN+DLVFCRAP
Sbjct: 137 LAKAVAAEWEYQETDGIRPFTMPLMKLACTALERVPLTRPKIIEHLMGKFNRDLVFCRAP 196

Query: 212 QDDDQTTGVYERQAEKIDPLLDWVHSEFGFKPNVYSSFFGGKQED-TIKTVEDLLRKSDD 271
            +DD T+GVYERQ EKIDPLLDWVHSEFGFKP VYSS FGG QED  IK VEDLLRK+DD
Sbjct: 197 -EDDLTSGVYERQVEKIDPLLDWVHSEFGFKPIVYSSLFGGNQEDGLIKAVEDLLRKTDD 256

Query: 272 CELASIDAIASAAHSLIIAIGIFRGKLQIKEAIELVRLEEDLQVDKWGLVEGGHDVDVAD 301
           CELASIDAIASAAHSLIIAIGIFRGKLQI+EAIEL+RLEED QVDKWGLVEGGHDVD+AD
Sbjct: 257 CELASIDAIASAAHSLIIAIGIFRGKLQIEEAIELIRLEEDFQVDKWGLVEGGHDVDIAD 316

[Close]

BLAST of Sed0012039 vs. ExPASy TrEMBL
Match: A0A1S3BNE3 (ATP synthase mitochondrial F1 complex assembly factor 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491743 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.4e-98
Identity = 220/318 (69.18%), Postives = 236/318 (74.21%), Query Frame = 0


Query: 32  SPTV-PSLSFHLRTLTTSVATAAEQ--SESASFTFSDGNANENHVFLKAPISNSRADSPS 91
           +PT+ PS SF  R L TSVATA EQ  S++ASFTFS+ N  E  VF+KAP SNS   SP 
Sbjct: 17  NPTLTPSHSFRYRMLCTSVATAPEQSPSDAASFTFSNDNPREEPVFIKAPRSNS--SSP- 76

Query: 92  FSSSSATMPTSFMT-----------VTTREADDRNRWTVML------------------- 151
            SSSS TMPTSFMT           VTTREADD N WTVML                   
Sbjct: 77  -SSSSVTMPTSFMTGSIVGKRFYQKVTTREADDGNGWTVMLDYRTLKTPTKRPLKLPTLG 136

Query: 152 -----------RQRNGIRPFTMPLMKLACT----VPLTRPKIIEHLMNKFNQDLVFCRAP 211
                      ++ +GIRPFTMPLMKLACT    VPLTRPKIIEHLM KFN+DLVFCRAP
Sbjct: 137 LAKAVAAEWEYQETDGIRPFTMPLMKLACTALERVPLTRPKIIEHLMGKFNRDLVFCRAP 196

Query: 212 QDDDQTTGVYERQAEKIDPLLDWVHSEFGFKPNVYSSFFGGKQED-TIKTVEDLLRKSDD 271
            +DD T+GVYERQ EKIDPLLDWVHSEFGFKP VYSS FGG QED  IK VEDLLRK+DD
Sbjct: 197 -EDDLTSGVYERQVEKIDPLLDWVHSEFGFKPIVYSSLFGGNQEDGLIKAVEDLLRKTDD 256

Query: 272 CELASIDAIASAAHSLIIAIGIFRGKLQIKEAIELVRLEEDLQVDKWGLVEGGHDVDVAD 301
           CELASIDAIASAAHSLIIAIGIFRGKLQI+EAIEL+RLEED QVDKWGLVEGGHDVD+AD
Sbjct: 257 CELASIDAIASAAHSLIIAIGIFRGKLQIEEAIELIRLEEDFQVDKWGLVEGGHDVDIAD 316

[Close]

BLAST of Sed0012039 vs. TAIR 10
Match: AT5G40660.1 (ATP12 protein-related )

HSP 1 Score: 282.3 bits (721), Expect = 4.4e-76
Identity = 172/313 (54.95%), Postives = 206/313 (65.81%), Query Frame = 0


Query: 37  SLSFHLRTLTTSVATAAEQSE------SASFTFSDGNANENHVFLKAPISNSRADSPSFS 96
           +L+   R+L T+ A     S+      S+SFTF     NE  + +KAP  NSR  +    
Sbjct: 17  NLAIRARSLCTTSAARQPDSDTQPSESSSSFTFE--KENEKPILVKAP--NSRRKN---E 76

Query: 97  SSSATMPTSFMT-----------VTTREADDRNRWTVMLRQR------------------ 156
           S S TMPTSFMT           VTTREADD N WTVML  R                  
Sbjct: 77  SDSVTMPTSFMTGSIVGKRFYKKVTTREADDGNGWTVMLDYRTLKTPSKRPLKLRSLALA 136

Query: 157 ------------NGIRPFTMPLMKLACT----VPLTRPKIIEHLMNKFNQDLVFCRAPQD 216
                        GIRPFTMPLM+LACT    VPLTR KIIEHL  K +QDLVF RAP+D
Sbjct: 137 KAIAAEWEYQLTEGIRPFTMPLMRLACTALERVPLTRSKIIEHLSRKIHQDLVFFRAPED 196

Query: 217 DDQTTGVYERQAEKIDPLLDWVHSEFGFKPNVYSSFFGGKQED-TIKTVEDLLRKSDDCE 276
           +D T+ V++ Q E IDPLL+W+ SEF  KP VYSS FGGKQ+D  +K VE+LL+K++D E
Sbjct: 197 NDLTSDVHDIQVESIDPLLEWIESEFRVKPKVYSSIFGGKQDDKLVKAVEELLKKTNDGE 256

Query: 277 LASIDAIASAAHSLIIAIGIFRGKLQIKEAIELVRLEEDLQVDKWGLVEGGHDVDVADLL 298
           LASIDA+ ++AHS++IA+GIF GKLQI +AI+L+RLEEDLQVDKWGLVEGGHD+DVADL 
Sbjct: 257 LASIDALQASAHSIVIALGIFCGKLQIDDAIKLIRLEEDLQVDKWGLVEGGHDIDVADLK 316

The following BLAST results are available for this feature:

BLAST of Sed0012039 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878128.1	6.1e-104	65.60	ATP synthase mitochondrial F1 complex assembly factor 2 isoform X2 [Benincasa hi...	[more]
XP_022934998.1	5.2e-103	65.31	ATP synthase mitochondrial F1 complex assembly factor 2 [Cucurbita moschata]	[more]
XP_023527484.1	3.4e-102	64.72	ATP synthase mitochondrial F1 complex assembly factor 2 [Cucurbita pepo subsp. p...	[more]
KAG7017797.1	1.3e-101	64.72	ATP synthase mitochondrial F1 complex assembly factor 2 [Cucurbita argyrosperma ...	[more]
XP_022983210.1	1.7e-101	64.72	ATP synthase mitochondrial F1 complex assembly factor 2 [Cucurbita maxima]	[more]

BLAST of Sed0012039 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8N5M1	1.3e-11	24.73	ATP synthase mitochondrial F1 complex assembly factor 2 OS=Homo sapiens OX=9606 ...	[more]
Q91YY4	1.1e-10	24.19	ATP synthase mitochondrial F1 complex assembly factor 2 OS=Mus musculus OX=10090...	[more]
Q1LZ96	3.1e-10	25.27	ATP synthase mitochondrial F1 complex assembly factor 2 OS=Bos taurus OX=9913 GN...	[more]

BLAST of Sed0012039 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9A4	2.5e-103	65.31	ATP synthase mitochondrial F1 complex assembly factor 2 OS=Cucurbita moschata OX...	[more]
A0A6J1J577	8.1e-102	64.72	ATP synthase mitochondrial F1 complex assembly factor 2 OS=Cucurbita maxima OX=3...	[more]
A0A6J1DKX6	3.4e-100	65.67	ATP synthase mitochondrial F1 complex assembly factor 2 OS=Momordica charantia O...	[more]
E5GCD8	1.4e-98	69.18	ATP12-like protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3BNE3	1.4e-98	69.18	ATP synthase mitochondrial F1 complex assembly factor 2 isoform X1 OS=Cucumis me...	[more]

BLAST of Sed0012039 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40660.1	4.4e-76	54.95	ATP12 protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011419	ATP12, ATP synthase F1-assembly protein	PFAM	PF07542	ATP12	coord: 114..187 e-value: 2.1E-7 score: 31.1
IPR011419	ATP12, ATP synthase F1-assembly protein	PANTHER	PTHR21013	ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR	coord: 119..298
IPR023335	ATP12 orthogonal Bundle domain superfamily	GENE3D	1.10.3580.10	ATP12 ATPase	coord: 129..298 e-value: 1.5E-40 score: 140.5
None	No IPR available	SUPERFAMILY	160909	ATP12-like	coord: 102..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012039.1	Sed0012039.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly
biological_process	GO:0043461	proton-transporting ATP synthase complex assembly
cellular_component	GO:0005739	mitochondrion