Sed0011997 (gene) Chayote v1

Overview
NameSed0011997
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRas-related protein
LocationLG03: 3865728 .. 3871008 (-)
RNA-Seq ExpressionSed0011997
SyntenySed0011997
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATCGGATTCGATTCGGATCTGCTTTTCCGAATCCGACATGTCGTTTCATCGCGGGGCGACGTCGTTCACAATCGCGATTCCATTGAAAGTTGAATTGTGAAATATTGGGAAAATTTCAACAGCCATTAACGAACCAGTCCCGAAGGCGCAAAGCTTCTTCTTCTCTTCGAACACTCAAAACTATCCACGAAAGTTCAATTCACTGCAAATTACTTGGATCCATTACTTCACTCATCCTTCATTGCCATGGGTTGCTCCTCCTCTGTGCCAGGTATTTTCATTTCTTGAATTTCGTTTTTTCCTGTCTGTTAGGGTTCTACGATTCTCTATTTTTCCGAGTCCGATCAATGAAGGCGTATTGAGATTTATGATGTTGATTGTTTTGTCCCTTCCATGTTGTTGATTATGGAGTTGTCTTGGTTTCTTGATTTTTTTTTTTTTTTGGTTAAGGGGGATATTAGGGTTTGGTGGGTTTTATGCAAGATGTCTACTATTTAGCTCTTAGTTTTACTGCTGGGAGATTTATGTACAGTTTGATTGATCTTTTGGTGGGTTTATTGTGCAGACAGGGCTCCTGGACGATCGGCTGTGCTTAATCCAGAGAACAGTGCAACCGATTCCAAGAACTTGCGCGTCAAGGTATTTGAGACGCCACTTGAAGTTTTTGTTATGAAAATGGTACAACAATCGAAAAAAAACTATTAAGAATCGTGAGAGAAAAACAAAAAAATTTTACGTGGTTCTTTAACAATGTCGATGTCTTAACCTTTTTATTAAGGAGATAACAGATTAATGAATGTGGATCATTTGTGGCTGATATTTTTAAAGAGATTATATAGTGCACTCTCATAAAATATTATTATAAAATAGACCCTAATACGAAAATAAAAACCCAATTACACACACACACATATATATTTTTAGTACATAGTGGGAGAAGGGGGACCAACAAACCCTACATAGAGGGCACAACTACTCTCAAATAATATGAGAGCCAAATACCGATTTTCGGGTTCGAACTCGTGACTATGGAGTTGAAATGGATTAACACCATACAAGATAACCAACTACACTACTGACCCTCGATATATTTCGTCTAGGCATATTTCAACAGTTGTATTTTTTTTTTCTTTATTCTTGTTAATGGAATAAGGTCTTGAGTGAATTCTATGTCAGACTAATTAATAATAACTGGTAATTTTGTTGACTTCGGATTCTTTCCCGTAAGACACTAAAAACAATGATTTCCTCGTTCTGGAATTCATAATTGAGCTACATATGTTTTTTAATGTAATGATATTTGAAGTTAGAGATGTGCATATGCTTATGAAGCACTTAGAAAGCTTGAAAGTTTTCTTGATATCTTATGCAGCTTGTCCTGCTGGGTGATTCTGGGGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCATCATCTAAGGTTAGAACTATATACATTCCAGAAATTATTAACATAAATCAATGCTTAAGATGAATAAGTTTGTCTTTGTCATTTCATTCCCAAAGTAATAACAATCTTTTTATTCGAAATGTTTGTTGAGAAAATTCAGGTAACTGTCGGTGCATCATTCCTGTCACAAACGATAGCTTTACAAGATTCTTCAACAGTGAAGTTTGAAATATGGGACACTGCTGGGCAAGAGAGGTACAATTATTGAAATCTCTTGTCGATATTCATATCCCCTAACGCGTGTTTTTAACTTCTTAGCAAACAACAAAATTCTCATTGGTAGCTCTTTCCTAGCTTGATTCTTGTTCATGAAAGTTTTTGTTGCTAGTGGTTATTTATGACCGTTGATTTGTCGTGTTTAGGTATGCGGCATTAGCTCCACTGTATTATCGAGGTGCTGCAGTTGCAGTTATTGTATATGATATAACAATCTTGGATTCCTTCGCCAAAGCACAATATTGGGTTAAGGTATGTAGTTCTTGTACTATATTTTCATTCAAATCCAAATTGTTATATCTAAATTGTTGTTATGCTAAACAGTTTTGTGATATCCATGGAGCCTTACAATCTTGTTTAATAACCATTATGTGTACATTAAGAAAAATCTAAGAGGCTCCATCTTTAGTTGAGTTTGCCACTCACTACTGGCCAAATTTTAAACAAAATGGAATTCTTATTAATCCATCAATTGATTATTAGGTAATCACATTTTTAAATACCAAACTGTCCCTTTGTTGCTTTTACTGGCAATAAGATTATGATATTGGCTTATTAAAAATGCTTAATAACTTCTTATCCGAAATAAAAAATGCTGGATAACTTTTTTTTGTTTCCTATAAAAAAATGTTAGGTAACCTTGTGTTGTAGCCTGAAGGTTACCATTCCCTTTTAACAGCATTTTCCTAGTAGGTAATGCGTTACATCTTTGCCCCTTGATAAACAATCCTTTCTTTTTATGGGACTTCTTTCTCCCAGCTTCCAATAAAATAGAGTGTTGTTATGGATTTTGCCATTTGAGCTGTTCTGGTGTTGTGGTTGGAGAGGAGAATTTTTTAAAAAAAAATTGGATTATTTTTTTTTTTCGGTTTGAATGAAAGAAAAAAAAATCTCGCATAAAAATGTATAACCTTAAGATGTCATAGTGATTTGTTAATGACCAGGAGGTTTGTGATTCGAGTCTCCCAATCACTATGATGCTTAAGAAAAAGATTTCACCTCTTCTTTTTCAAAGGTTGCATGCATAGTGTTGGTTGATATAACTAAATTTTACTCCAATCCACAAACTTAAGTTTTTGGGTTGATTGGTGATTTAACAAAATTCAATATGGTATCAGGACAGGAGGTCCCGAGTTCTAGTCCTTGTCGAGTCATTTCTCTCCAATTAAAATTGAATTCCACTTTAAGACATTTCTTAAATTTTAAGGCCACAAAGTACGGGGAGTGTTTGTTGATATAATTAAAATTATCTCGACCCATAAGCTTAAGTTTTTGGGCTGATTTAACACAGTATATGGATTTTTTGCTTTTCCTTTCATGTTACCTCATTCTCCTGAATCCTACTATCAAGGATGTGTGTTTTCCAAACCAAAAGGGAGAAAATAGGAAGACATGATGGTGTTTCCTGACTTTAAAACAATCAATGATAATCATGTTAACATAGTCCCGTCCTATTTTTAAAATACCAGCAAAGTTCTTTTGAGAGAGTTTTTTTGGGGGGGGACAATTAGTTGTTAAAAACTCATAACTCTCGAGTAGAAAATTTAACAATGAACTGACCGACTGAGTATGAATACAAGCCACTATTTTTTCAGGAGGAAAAAACCTAAACAACACCCTCATTAATGTGTTTATTTTGAGTTGGTTATCTTTTGACTAATTCACAATATTGGGTACTTGCAGGAGCTACAAAAGCATGGCAGCCCTGATATCATTTTGGCATTGGTCGGTAACAAAGCTGATCTCCAAGAGAAGAGGGAAGTATCCGTTCAGGTAATTTCAGTGTTATTCAATAGAATGCATCGTTCTCGGATCTTCTCTATTTGTTCTTTTTTTATTATATTGCGTTCTTTGCAAAATGGGGAAAATATATTAATTCTCTAATTTATGTTTCACTTTTGAAGGATGGTGCTGACTTTGCAGAGAAGAACGGAATGTTCTTTATTGAGACATCTGCTAAGACTGCAGATAATATAAACGAGCTGTTTGAGGTATTCCTGATTTTATCCTTTTAGTACGACTTTCATGGCTGCTGTCTGTGCTACATCATTGTAGTTATTTTTGTGATATTCCACTGTTGGAAGAGCCGTATTAAAAAGTTTCATTTATTTTCTGTTCTCCATGTTTTCATAGTGCATGTGAATGGAAACGATATTTCAAATTTTCAATATTGCTGATTGGTTGATTTTTAGTTCATAATCTGTTTTAGTCATTGTCATAGCCAGTAAATCTATTGGTGATAGTGTTTTAGAGGGTCTTTGAGACCAAAAGATTGTAGGTTCAATGTCCACCTATGACCTACCTACTTAGAAATTAATTTTATATGAGTTTTCTTAATAACTATTAGAGAATATGAGGTTCCACCTCACACCCAACATTGAGGGGAGTAACCCATATCTCTTTTATATTGATGTTGGACTCCCCACTTTTTCAATATGGGACAATTGAGATCTCAATGATAATCAAATACTATTTCGTTAGAAAAGTCAACTTGCGTAGAAGCGAGTCCGGATACTCACGAATATTTTTAAAAAAAATAATAATAAGGTGATAGTGTTGAACTCCTAAGGTGTGAAATCTGGACGTTCTTTCACCCCATCTGCTCGTTGGTGGTTGTATCTAACATTATTCTAACTCCATAAGGTGTCAAATCAATTTCCATGCTGTCAGTGTTCTCTTAAGGTTTCCATTGGTGATTCTATCTTTTCATGATTGATCAATGCCACCCTTAAAATTGTGGCCTGCCGGATGAACAAGTTTATCAATTTTGATTCGAAATTTTCTGACCGTTAGCTCTGAAATGATTTTTTTTTTGAGATTACAATAATTGAAGGTGAGGGGATTCGAATCTATGGCCTCTTGGTCATTGGGTGTATAGTAATGCTATTGAGCAATTGCTCTGGTTAACTATTGAGCTGATTTATCATTTGTTTGTATATGTCATATGTTTTTTGTACATCCCTCTCCCTAGTTCATGCTTCTATGTAACTAGATACTTTATGAAACAGCTAATAACTAGGGTTTTTTAGACATATTTTGCTGCTGTGAAACATGTTCAGTAGTTGTCGCGCTCACTCGACTAAAGTCTCTCTAGGAATGTATATCGCTTATTTCGAGAGGGGGCATTTTAAGATTCATGGCTTTGTAGATTCATTCAGAGGTTTCTAATTCAAATACATTTCGAGATAATCGATTTGGTTTTGCAGGAAATTGCGAAGCGACTGCCACGACCAACTTCCTCGTGATTAGAAGAACTCAGTTGTGACATGAATTGTCTTTTATCAACAGCAGTTTATTTTACAAGAAACCAGCTTGCTCCTCCCATGTGATCTGTGTATAGTTTGGTGAGTTCTGCAGTCTTTGGCTTTGTTGTTTGCTTTTATATTTTCAGTCTTTTCAAGTGTAACATTGTAAACAGAGATGAAAATGGTGAAAGATTCATTCGCCTTTAAACCATGAGCTGCATTTCTAGGCTATATTTGTTGTGACATTACACTTAGTGGAGAAATTTAAACTCTATTTGAGATCTTTGAATCAATTTATAGGATCAAATAAAACATCATGTAATGCCATTTA

mRNA sequence

CTCATCGGATTCGATTCGGATCTGCTTTTCCGAATCCGACATGTCGTTTCATCGCGGGGCGACGTCGTTCACAATCGCGATTCCATTGAAAGTTGAATTGTGAAATATTGGGAAAATTTCAACAGCCATTAACGAACCAGTCCCGAAGGCGCAAAGCTTCTTCTTCTCTTCGAACACTCAAAACTATCCACGAAAGTTCAATTCACTGCAAATTACTTGGATCCATTACTTCACTCATCCTTCATTGCCATGGGTTGCTCCTCCTCTGTGCCAGACAGGGCTCCTGGACGATCGGCTGTGCTTAATCCAGAGAACAGTGCAACCGATTCCAAGAACTTGCGCGTCAAGCTTGTCCTGCTGGGTGATTCTGGGGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCATCATCTAAGGTAACTGTCGGTGCATCATTCCTGTCACAAACGATAGCTTTACAAGATTCTTCAACAGTGAAGTTTGAAATATGGGACACTGCTGGGCAAGAGAGGTATGCGGCATTAGCTCCACTGTATTATCGAGGTGCTGCAGTTGCAGTTATTGTATATGATATAACAATCTTGGATTCCTTCGCCAAAGCACAATATTGGGTTAAGGAGCTACAAAAGCATGGCAGCCCTGATATCATTTTGGCATTGGTCGGTAACAAAGCTGATCTCCAAGAGAAGAGGGAAGTATCCGTTCAGGATGGTGCTGACTTTGCAGAGAAGAACGGAATGTTCTTTATTGAGACATCTGCTAAGACTGCAGATAATATAAACGAGCTGTTTGAGGAAATTGCGAAGCGACTGCCACGACCAACTTCCTCGTGATTAGAAGAACTCAGTTGTGACATGAATTGTCTTTTATCAACAGCAGTTTATTTTACAAGAAACCAGCTTGCTCCTCCCATGTGATCTGTGTATAGTTTGGTGAGTTCTGCAGTCTTTGGCTTTGTTGTTTGCTTTTATATTTTCAGTCTTTTCAAGTGTAACATTGTAAACAGAGATGAAAATGGTGAAAGATTCATTCGCCTTTAAACCATGAGCTGCATTTCTAGGCTATATTTGTTGTGACATTACACTTAGTGGAGAAATTTAAACTCTATTTGAGATCTTTGAATCAATTTATAGGATCAAATAAAACATCATGTAATGCCATTTA

Coding sequence (CDS)

ATGGGTTGCTCCTCCTCTGTGCCAGACAGGGCTCCTGGACGATCGGCTGTGCTTAATCCAGAGAACAGTGCAACCGATTCCAAGAACTTGCGCGTCAAGCTTGTCCTGCTGGGTGATTCTGGGGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCATCATCTAAGGTAACTGTCGGTGCATCATTCCTGTCACAAACGATAGCTTTACAAGATTCTTCAACAGTGAAGTTTGAAATATGGGACACTGCTGGGCAAGAGAGGTATGCGGCATTAGCTCCACTGTATTATCGAGGTGCTGCAGTTGCAGTTATTGTATATGATATAACAATCTTGGATTCCTTCGCCAAAGCACAATATTGGGTTAAGGAGCTACAAAAGCATGGCAGCCCTGATATCATTTTGGCATTGGTCGGTAACAAAGCTGATCTCCAAGAGAAGAGGGAAGTATCCGTTCAGGATGGTGCTGACTTTGCAGAGAAGAACGGAATGTTCTTTATTGAGACATCTGCTAAGACTGCAGATAATATAAACGAGCTGTTTGAGGAAATTGCGAAGCGACTGCCACGACCAACTTCCTCGTGA

Protein sequence

MGCSSSVPDRAPGRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSFAKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTADNINELFEEIAKRLPRPTSS
Homology
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BLAST of Sed0011997 vs. NCBI nr
Match: XP_008456515.1 (PREDICTED: ras-related protein RABF1 [Cucumis melo])

HSP 1 Score: 366.3 bits (939), Expect = 1.7e-97
Identity = 187/199 (93.97%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSS 60
           MGCSSSVPDRA GRS  LNPENSA DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP+S
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSF 120
           KVTVGASFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT  DSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADLQEKR+VSVQDG ++AEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]
BLAST of Sed0011997 vs. NCBI nr
Match: XP_038884272.1 (ras-related protein RABF1 [Benincasa hispida])

HSP 1 Score: 365.2 bits (936), Expect = 3.7e-97
Identity = 186/199 (93.47%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSS 60
           MGCSSSVPDRA GRS  LNPEN+A DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP+S
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSF 120
           KVTVGASFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT  DSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADLQEKR+VSVQDG ++AEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]
BLAST of Sed0011997 vs. NCBI nr
Match: XP_004140073.1 (ras-related protein RABF1 [Cucumis sativus] >KGN47841.1 hypothetical protein Csa_002805 [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 3.7e-97
Identity = 186/199 (93.47%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSS 60
           MGCSSSVPDRA GRS  LNPENSA DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP+S
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSF 120
           KVTVGASFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT  DSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADLQEKR+V+VQDG ++AEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVTVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]
BLAST of Sed0011997 vs. NCBI nr
Match: XP_022939911.1 (ras-related protein RABF1-like [Cucurbita moschata] >XP_022993727.1 ras-related protein RABF1-like [Cucurbita maxima] >XP_023549512.1 ras-related protein RABF1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549513.1 ras-related protein RABF1-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6578812.1 Ras-related protein RABF1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016336.1 Ras-related protein RABF1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364.0 bits (933), Expect = 8.2e-97
Identity = 185/199 (92.96%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSS 60
           MGCSSS+PDRA GRS VLNPEN+A DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP+S
Sbjct: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSF 120
           KVTVGASFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT  DSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKR+VSVQDG ++AEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]
BLAST of Sed0011997 vs. NCBI nr
Match: XP_022956144.1 (ras-related protein RABF1-like [Cucurbita moschata] >KAG6602301.1 Ras-related protein RABF1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032982.1 Ras-related protein RABF1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.5 bits (929), Expect = 2.4e-96
Identity = 185/199 (92.96%), Postives = 191/199 (95.98%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSS 60
           MGCSSSVPDRA G S  +NPENSA DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP+S
Sbjct: 1   MGCSSSVPDRASGPSGGVNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSF 120
           KVTVGASFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT  DSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADLQEKR+VSVQDG ++AEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]
BLAST of Sed0011997 vs. ExPASy Swiss-Prot
Match: Q9CB01 (Ras-related protein RABF1 OS=Arabidopsis thaliana OX=3702 GN=RABF1 PE=1 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 5.2e-86
Identity = 164/201 (81.59%), Postives = 178/201 (88.56%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGR-SAVLNPENSA-TDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60
           MGC+SS+PDR  G  S + N EN+   D+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD 
Sbjct: 1   MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDA 60

Query: 61  SSKVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILD 120
           +SKVTVGASFLSQTIALQDS+TVKFEIWDTAGQERY+ALAPLYYRGA VAVIVYDIT  +
Sbjct: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE 120

Query: 121 SFAKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKT 180
           SF KAQYWVKELQKHGSPDI++ALVGNKADL EKREV  +DG + AEKNGMFFIETSAKT
Sbjct: 121 SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKT 180

Query: 181 ADNINELFEEIAKRLPRPTSS 200
           ADNIN+LFEEI KRLPRP  S
Sbjct: 181 ADNINQLFEEIGKRLPRPAPS 201

[Close]
BLAST of Sed0011997 vs. ExPASy Swiss-Prot
Match: P31583 (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.3e-56
Identity = 105/173 (60.69%), Postives = 143/173 (82.66%), Query Frame = 0 

Query: 23  SATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTIALQDSSTVK 82
           +++   NL  KLVLLGD G GKS +V+RFV+GQF    + T+GA+F S T+A+ +++TVK
Sbjct: 2   ASSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAV-NNATVK 61

Query: 83  FEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSFAKAQYWVKELQKHGSPDIILAL 142
           FEIWDTAGQERY +LAP+YYRGAA A+IVYDIT  DSFA+A+ WV+ELQK G+P++++AL
Sbjct: 62  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMAL 121

Query: 143 VGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTADNINELFEEIAKRLPR 196
            GNKADL+++R+V+ ++   +AE+NG+FF+ETSAKTA N+N +F EIAKRLPR
Sbjct: 122 AGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRLPR 173

[Close]
BLAST of Sed0011997 vs. ExPASy Swiss-Prot
Match: P29687 (Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 9.6e-56
Identity = 103/167 (61.68%), Postives = 140/167 (83.83%), Query Frame = 0 

Query: 29  NLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTIALQDSSTVKFEIWDT 88
           NL  KLVLLGD G GKS +V+RFV+GQF    + T+GA+F S T+++ +++TVKFEIWDT
Sbjct: 8   NLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSV-NNATVKFEIWDT 67

Query: 89  AGQERYAALAPLYYRGAAVAVIVYDITILDSFAKAQYWVKELQKHGSPDIILALVGNKAD 148
           AGQERY +LAP+YYRGAA A+IVYDIT  +S A+A+ WV+ELQK G+P++++AL GNKAD
Sbjct: 68  AGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMALAGNKAD 127

Query: 149 LQEKREVSVQDGADFAEKNGMFFIETSAKTADNINELFEEIAKRLPR 196
           L++KR+V+ ++   +AE+NG+FF+ETSAKTA N+N++F EIAKRLPR
Sbjct: 128 LEDKRKVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIAKRLPR 173

[Close]
BLAST of Sed0011997 vs. ExPASy Swiss-Prot
Match: Q58DS9 (Ras-related protein Rab-5C OS=Bos taurus OX=9913 GN=RAB5C PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.1e-55
Identity = 107/183 (58.47%), Postives = 137/183 (74.86%), Query Frame = 0 

Query: 13  GRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQT 72
           GR     P   A  +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+QT
Sbjct: 3   GRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQT 62

Query: 73  IALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSFAKAQYWVKELQK 132
           + L D +TVKFEIWDTAGQERY +LAP+YYRGA  A++VYDIT  D+FA+A+ WVKELQ+
Sbjct: 63  VCL-DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQR 122

Query: 133 HGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTADNINELFEEIAKR 192
             SP+I++AL GNKADL  KR V  Q+   +AE N + F+ETSAKTA N+NE+F  IAK+
Sbjct: 123 QASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKK 182

Query: 193 LPR 196
           LP+
Sbjct: 183 LPK 184

[Close]
BLAST of Sed0011997 vs. ExPASy Swiss-Prot
Match: P51147 (Ras-related protein Rab-5C OS=Canis lupus familiaris OX=9615 GN=RAB5C PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.8e-55
Identity = 106/183 (57.92%), Postives = 137/183 (74.86%), Query Frame = 0 

Query: 13  GRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQT 72
           GR     P   A  +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+QT
Sbjct: 3   GRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQT 62

Query: 73  IALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSFAKAQYWVKELQK 132
           + L D +TVKFEIWDTAGQERY +LAP+YYRGA  A++VYDIT  D+FA+A+ WVKELQ+
Sbjct: 63  VCL-DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQR 122

Query: 133 HGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTADNINELFEEIAKR 192
             SP+I++AL GNKADL  KR V  Q+   +A+ N + F+ETSAKTA N+NE+F  IAK+
Sbjct: 123 QASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK 182

Query: 193 LPR 196
           LP+
Sbjct: 183 LPK 184

[Close]
BLAST of Sed0011997 vs. ExPASy TrEMBL
Match: A0A1S3C444 (ras-related protein RABF1 OS=Cucumis melo OX=3656 GN=LOC103496444 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.0e-98
Identity = 187/199 (93.97%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSS 60
           MGCSSSVPDRA GRS  LNPENSA DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP+S
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSF 120
           KVTVGASFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT  DSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADLQEKR+VSVQDG ++AEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]
BLAST of Sed0011997 vs. ExPASy TrEMBL
Match: A0A0A0KJ92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406530 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.8e-97
Identity = 186/199 (93.47%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSS 60
           MGCSSSVPDRA GRS  LNPENSA DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP+S
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSF 120
           KVTVGASFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT  DSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADLQEKR+V+VQDG ++AEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVTVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]
BLAST of Sed0011997 vs. ExPASy TrEMBL
Match: A0A6J1JTN6 (ras-related protein RABF1-like OS=Cucurbita maxima OX=3661 GN=LOC111489640 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.0e-97
Identity = 185/199 (92.96%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSS 60
           MGCSSS+PDRA GRS VLNPEN+A DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP+S
Sbjct: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSF 120
           KVTVGASFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT  DSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKR+VSVQDG ++AEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]
BLAST of Sed0011997 vs. ExPASy TrEMBL
Match: A0A6J1FH43 (ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111445632 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.0e-97
Identity = 185/199 (92.96%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSS 60
           MGCSSS+PDRA GRS VLNPEN+A DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP+S
Sbjct: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSF 120
           KVTVGASFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT  DSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKR+VSVQDG ++AEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]
BLAST of Sed0011997 vs. ExPASy TrEMBL
Match: A0A6J1GY77 (ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111457920 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.2e-96
Identity = 185/199 (92.96%), Postives = 191/199 (95.98%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGRSAVLNPENSATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSS 60
           MGCSSSVPDRA G S  +NPENSA DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP+S
Sbjct: 1   MGCSSSVPDRASGPSGGVNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSF 120
           KVTVGASFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDIT  DSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADLQEKR+VSVQDG ++AEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]
BLAST of Sed0011997 vs. TAIR 10
Match: AT3G54840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 318.5 bits (815), Expect = 3.7e-87
Identity = 164/201 (81.59%), Postives = 178/201 (88.56%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGR-SAVLNPENSA-TDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60
           MGC+SS+PDR  G  S + N EN+   D+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD 
Sbjct: 1   MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDA 60

Query: 61  SSKVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILD 120
           +SKVTVGASFLSQTIALQDS+TVKFEIWDTAGQERY+ALAPLYYRGA VAVIVYDIT  +
Sbjct: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE 120

Query: 121 SFAKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKT 180
           SF KAQYWVKELQKHGSPDI++ALVGNKADL EKREV  +DG + AEKNGMFFIETSAKT
Sbjct: 121 SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKT 180

Query: 181 ADNINELFEEIAKRLPRPTSS 200
           ADNIN+LFEEI KRLPRP  S
Sbjct: 181 ADNINQLFEEIGKRLPRPAPS 201

[Close]
BLAST of Sed0011997 vs. TAIR 10
Match: AT3G54840.2 (Ras-related small GTP-binding family protein )

HSP 1 Score: 301.2 bits (770), Expect = 6.1e-82
Identity = 155/189 (82.01%), Postives = 169/189 (89.42%), Query Frame = 0 

Query: 1   MGCSSSVPDRAPGR-SAVLNPENSA-TDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60
           MGC+SS+PDR  G  S + N EN+   D+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD 
Sbjct: 1   MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDA 60

Query: 61  SSKVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILD 120
           +SKVTVGASFLSQTIALQDS+TVKFEIWDTAGQERY+ALAPLYYRGA VAVIVYDIT  +
Sbjct: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE 120

Query: 121 SFAKAQYWVKELQKHGSPDIILALVGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKT 180
           SF KAQYWVKELQKHGSPDI++ALVGNKADL EKREV  +DG + AEKNGMFFIETSAKT
Sbjct: 121 SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKT 180

Query: 181 ADNINELFE 188
           ADNIN+LFE
Sbjct: 181 ADNINQLFE 189

[Close]
BLAST of Sed0011997 vs. TAIR 10
Match: AT4G19640.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 209.5 bits (532), Expect = 2.4e-54
Identity = 100/173 (57.80%), Postives = 138/173 (79.77%), Query Frame = 0 

Query: 23  SATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTIALQDSSTVK 82
           +A  +K++  KLVLLGD G GKS +VLRFV+ QF    + T+GA+F SQT+A+ D +TVK
Sbjct: 2   AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVND-ATVK 61

Query: 83  FEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSFAKAQYWVKELQKHGSPDIILAL 142
           FEIWDTAGQERY +LAP+YYRGAA A+IV+D+T   SF +A+ WV+ELQ  G+P++++AL
Sbjct: 62  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 121

Query: 143 VGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTADNINELFEEIAKRLPR 196
            GNK+DL + R+V+ +D   +A++NG+FF+ETSAKTA N+ E+F EIA+RLPR
Sbjct: 122 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173

[Close]
BLAST of Sed0011997 vs. TAIR 10
Match: AT5G45130.1 (RAB homolog 1 )

HSP 1 Score: 208.8 bits (530), Expect = 4.1e-54
Identity = 101/173 (58.38%), Postives = 138/173 (79.77%), Query Frame = 0 

Query: 23  SATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTIALQDSSTVK 82
           +++ +KN+  KLVLLGD G GKS +VLRFV+ QF    + T+GA+F SQT+A+ D +TVK
Sbjct: 2   ASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVND-ATVK 61

Query: 83  FEIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSFAKAQYWVKELQKHGSPDIILAL 142
           FEIWDTAGQERY +LAP+YYRGAA A+IV+DIT   SF +A+ WV+ELQ  G+P++++AL
Sbjct: 62  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMAL 121

Query: 143 VGNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTADNINELFEEIAKRLPR 196
            GNKADL + R+VS ++   +A++N +FF+ETSAKTA N+ ++F EIAKRLPR
Sbjct: 122 AGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPR 173

[Close]
BLAST of Sed0011997 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-38
Identity = 81/175 (46.29%), Postives = 112/175 (64.00%), Query Frame = 0 

Query: 24  ATDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTIALQDSSTVKF 83
           A D  +   K+VL+GDSGVGKS ++ RF R +F   SK T+G  F +++I + D   VK 
Sbjct: 6   ADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHV-DEKIVKA 65

Query: 84  EIWDTAGQERYAALAPLYYRGAAVAVIVYDITILDSFAKAQYWVKELQKHGSPDIILALV 143
           +IWDTAGQERY A+   YYRGA  A++VYD+T   +F   + W+KEL+ H   +I++ LV
Sbjct: 66  QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLV 125

Query: 144 GNKADLQEKREVSVQDGADFAEKNGMFFIETSAKTADNINELFEEIAKRLPRPTS 199
           GNKADL+  R VS +D   FAE+   FF+ETSA  A N+   F E+  ++ R  S
Sbjct: 126 GNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVAS 179

The following BLAST results are available for this feature:
BLAST of Sed0011997 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008456515.11.7e-9793.97PREDICTED: ras-related protein RABF1 [Cucumis melo][more]
XP_038884272.13.7e-9793.47ras-related protein RABF1 [Benincasa hispida][more]
XP_004140073.13.7e-9793.47ras-related protein RABF1 [Cucumis sativus] >KGN47841.1 hypothetical protein Csa... [more]
XP_022939911.18.2e-9792.96ras-related protein RABF1-like [Cucurbita moschata] >XP_022993727.1 ras-related ... [more]
XP_022956144.12.4e-9692.96ras-related protein RABF1-like [Cucurbita moschata] >KAG6602301.1 Ras-related pr... [more]
BLAST of Sed0011997 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9CB015.2e-8681.59Ras-related protein RABF1 OS=Arabidopsis thaliana OX=3702 GN=RABF1 PE=1 SV=1[more]
P315833.3e-5660.69Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1[more]
P296879.6e-5661.68Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1[more]
Q58DS92.1e-5558.47Ras-related protein Rab-5C OS=Bos taurus OX=9913 GN=RAB5C PE=2 SV=1[more]
P511474.8e-5557.92Ras-related protein Rab-5C OS=Canis lupus familiaris OX=9615 GN=RAB5C PE=2 SV=1[more]
BLAST of Sed0011997 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C4448.0e-9893.97ras-related protein RABF1 OS=Cucumis melo OX=3656 GN=LOC103496444 PE=4 SV=1[more]
A0A0A0KJ921.8e-9793.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406530 PE=4 SV=1[more]
A0A6J1JTN64.0e-9792.96ras-related protein RABF1-like OS=Cucurbita maxima OX=3661 GN=LOC111489640 PE=4 ... [more]
A0A6J1FH434.0e-9792.96ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111445632 PE=... [more]
A0A6J1GY771.2e-9692.96ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111457920 PE=... [more]
BLAST of Sed0011997 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G54840.13.7e-8781.59Ras-related small GTP-binding family protein [more]
AT3G54840.26.1e-8282.01Ras-related small GTP-binding family protein [more]
AT4G19640.12.4e-5457.80Ras-related small GTP-binding family protein [more]
AT5G45130.14.1e-5458.38RAB homolog 1 [more]
AT3G15060.11.4e-3846.29RAB GTPase homolog A1G [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 32..53
score: 50.56
coord: 136..149
score: 49.71
coord: 171..193
score: 39.69
coord: 55..71
score: 27.71
coord: 74..96
score: 46.41
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 32..196
e-value: 5.9E-79
score: 278.3
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 33..196
e-value: 3.7E-27
score: 106.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR47978:SF10RAB FAMILY GTPASEcoord: 15..198
NoneNo IPR availablePANTHERPTHR47978FAMILY NOT NAMEDcoord: 15..198
NoneNo IPR availablePROSITEPS51419RABcoord: 27..199
score: 31.940111
NoneNo IPR availableCDDcd01860Rab5_relatedcoord: 31..194
e-value: 3.51345E-107
score: 302.548
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 34..196
e-value: 1.2E-11
score: 29.7
IPR001806Small GTPasePFAMPF00071Rascoord: 33..193
e-value: 2.5E-57
score: 193.0
IPR001806Small GTPasePROSITEPS51421RAScoord: 21..199
score: 16.261705
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 22..199
e-value: 2.5E-64
score: 218.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 28..197
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 32..189
e-value: 3.1E-29
score: 99.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0011997.1Sed0011997.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0012505 endomembrane system
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding